data_2OGB # _entry.id 2OGB # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.398 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2OGB pdb_00002ogb 10.2210/pdb2ogb/pdb RCSB RCSB041099 ? ? WWPDB D_1000041099 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-01-16 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-18 5 'Structure model' 1 4 2023-12-27 6 'Structure model' 1 5 2024-11-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Refinement description' 5 5 'Structure model' 'Data collection' 6 5 'Structure model' 'Database references' 7 5 'Structure model' 'Derived calculations' 8 6 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' chem_comp_atom 3 5 'Structure model' chem_comp_bond 4 5 'Structure model' database_2 5 5 'Structure model' struct_conn 6 5 'Structure model' struct_ref_seq_dif 7 5 'Structure model' struct_site 8 6 'Structure model' pdbx_entry_details 9 6 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 5 'Structure model' '_struct_ref_seq_dif.details' 5 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 6 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 7 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.entry_id 2OGB _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2007-01-05 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Bouyain, S.' 1 'Leahy, D.J.' 2 # _citation.id primary _citation.title ;Structure-based mutagenesis of the substrate-recognition domain of Nrdp1/FLRF identifies the binding site for the receptor tyrosine kinase ErbB3. ; _citation.journal_abbrev 'Protein Sci.' _citation.journal_volume 16 _citation.page_first 654 _citation.page_last 661 _citation.year 2007 _citation.journal_id_ASTM PRCIEI _citation.country US _citation.journal_id_ISSN 0961-8368 _citation.journal_id_CSD 0795 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17384230 _citation.pdbx_database_id_DOI 10.1110/ps.062700307 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Bouyain, S.' 1 ? primary 'Leahy, D.J.' 2 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'RING finger protein 41' 14507.568 2 6.3.2.19 ? 'Nrdp1 C-terminal domain' ? 2 non-polymer syn 'THIOCYANATE ION' 58.082 1 ? ? ? ? 3 non-polymer syn GLYCEROL 92.094 2 ? ? ? ? 4 water nat water 18.015 122 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;STIEYNEILEWVNSLQPARVTRWGG(MSE)ISTPDAVLQAVIKRSLVESGCPASIVNELIENAHERSWPQGLATLETRQ (MSE)NRRYYENYVAKRIPGKQAVVV(MSE)ACENQH(MSE)GDD(MSE)VQEPGLV(MSE)IFAHGVEEI ; _entity_poly.pdbx_seq_one_letter_code_can ;STIEYNEILEWVNSLQPARVTRWGGMISTPDAVLQAVIKRSLVESGCPASIVNELIENAHERSWPQGLATLETRQMNRRY YENYVAKRIPGKQAVVVMACENQHMGDDMVQEPGLVMIFAHGVEEI ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'THIOCYANATE ION' SCN 3 GLYCEROL GOL 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 THR n 1 3 ILE n 1 4 GLU n 1 5 TYR n 1 6 ASN n 1 7 GLU n 1 8 ILE n 1 9 LEU n 1 10 GLU n 1 11 TRP n 1 12 VAL n 1 13 ASN n 1 14 SER n 1 15 LEU n 1 16 GLN n 1 17 PRO n 1 18 ALA n 1 19 ARG n 1 20 VAL n 1 21 THR n 1 22 ARG n 1 23 TRP n 1 24 GLY n 1 25 GLY n 1 26 MSE n 1 27 ILE n 1 28 SER n 1 29 THR n 1 30 PRO n 1 31 ASP n 1 32 ALA n 1 33 VAL n 1 34 LEU n 1 35 GLN n 1 36 ALA n 1 37 VAL n 1 38 ILE n 1 39 LYS n 1 40 ARG n 1 41 SER n 1 42 LEU n 1 43 VAL n 1 44 GLU n 1 45 SER n 1 46 GLY n 1 47 CYS n 1 48 PRO n 1 49 ALA n 1 50 SER n 1 51 ILE n 1 52 VAL n 1 53 ASN n 1 54 GLU n 1 55 LEU n 1 56 ILE n 1 57 GLU n 1 58 ASN n 1 59 ALA n 1 60 HIS n 1 61 GLU n 1 62 ARG n 1 63 SER n 1 64 TRP n 1 65 PRO n 1 66 GLN n 1 67 GLY n 1 68 LEU n 1 69 ALA n 1 70 THR n 1 71 LEU n 1 72 GLU n 1 73 THR n 1 74 ARG n 1 75 GLN n 1 76 MSE n 1 77 ASN n 1 78 ARG n 1 79 ARG n 1 80 TYR n 1 81 TYR n 1 82 GLU n 1 83 ASN n 1 84 TYR n 1 85 VAL n 1 86 ALA n 1 87 LYS n 1 88 ARG n 1 89 ILE n 1 90 PRO n 1 91 GLY n 1 92 LYS n 1 93 GLN n 1 94 ALA n 1 95 VAL n 1 96 VAL n 1 97 VAL n 1 98 MSE n 1 99 ALA n 1 100 CYS n 1 101 GLU n 1 102 ASN n 1 103 GLN n 1 104 HIS n 1 105 MSE n 1 106 GLY n 1 107 ASP n 1 108 ASP n 1 109 MSE n 1 110 VAL n 1 111 GLN n 1 112 GLU n 1 113 PRO n 1 114 GLY n 1 115 LEU n 1 116 VAL n 1 117 MSE n 1 118 ILE n 1 119 PHE n 1 120 ALA n 1 121 HIS n 1 122 GLY n 1 123 VAL n 1 124 GLU n 1 125 GLU n 1 126 ILE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'house mouse' _entity_src_gen.gene_src_genus Mus _entity_src_gen.pdbx_gene_src_gene Rnf41 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'B834(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET41 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SCN non-polymer . 'THIOCYANATE ION' ? 'C N S -1' 58.082 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 0 ? ? ? A . n A 1 2 THR 2 193 ? ? ? A . n A 1 3 ILE 3 194 ? ? ? A . n A 1 4 GLU 4 195 195 GLU GLU A . n A 1 5 TYR 5 196 196 TYR TYR A . n A 1 6 ASN 6 197 197 ASN ASN A . n A 1 7 GLU 7 198 198 GLU GLU A . n A 1 8 ILE 8 199 199 ILE ILE A . n A 1 9 LEU 9 200 200 LEU LEU A . n A 1 10 GLU 10 201 201 GLU GLU A . n A 1 11 TRP 11 202 202 TRP TRP A . n A 1 12 VAL 12 203 203 VAL VAL A . n A 1 13 ASN 13 204 204 ASN ASN A . n A 1 14 SER 14 205 205 SER SER A . n A 1 15 LEU 15 206 206 LEU LEU A . n A 1 16 GLN 16 207 207 GLN GLN A . n A 1 17 PRO 17 208 208 PRO PRO A . n A 1 18 ALA 18 209 209 ALA ALA A . n A 1 19 ARG 19 210 210 ARG ARG A . n A 1 20 VAL 20 211 211 VAL VAL A . n A 1 21 THR 21 212 212 THR THR A . n A 1 22 ARG 22 213 213 ARG ARG A . n A 1 23 TRP 23 214 214 TRP TRP A . n A 1 24 GLY 24 215 215 GLY GLY A . n A 1 25 GLY 25 216 216 GLY GLY A . n A 1 26 MSE 26 217 217 MSE MSE A . n A 1 27 ILE 27 218 218 ILE ILE A . n A 1 28 SER 28 219 219 SER SER A . n A 1 29 THR 29 220 220 THR THR A . n A 1 30 PRO 30 221 221 PRO PRO A . n A 1 31 ASP 31 222 222 ASP ASP A . n A 1 32 ALA 32 223 223 ALA ALA A . n A 1 33 VAL 33 224 224 VAL VAL A . n A 1 34 LEU 34 225 225 LEU LEU A . n A 1 35 GLN 35 226 226 GLN GLN A . n A 1 36 ALA 36 227 227 ALA ALA A . n A 1 37 VAL 37 228 228 VAL VAL A . n A 1 38 ILE 38 229 229 ILE ILE A . n A 1 39 LYS 39 230 230 LYS LYS A . n A 1 40 ARG 40 231 231 ARG ARG A . n A 1 41 SER 41 232 232 SER SER A . n A 1 42 LEU 42 233 233 LEU LEU A . n A 1 43 VAL 43 234 234 VAL VAL A . n A 1 44 GLU 44 235 235 GLU GLU A . n A 1 45 SER 45 236 236 SER SER A . n A 1 46 GLY 46 237 237 GLY GLY A . n A 1 47 CYS 47 238 238 CYS CYS A . n A 1 48 PRO 48 239 239 PRO PRO A . n A 1 49 ALA 49 240 240 ALA ALA A . n A 1 50 SER 50 241 241 SER SER A . n A 1 51 ILE 51 242 242 ILE ILE A . n A 1 52 VAL 52 243 243 VAL VAL A . n A 1 53 ASN 53 244 244 ASN ASN A . n A 1 54 GLU 54 245 245 GLU GLU A . n A 1 55 LEU 55 246 246 LEU LEU A . n A 1 56 ILE 56 247 247 ILE ILE A . n A 1 57 GLU 57 248 248 GLU GLU A . n A 1 58 ASN 58 249 249 ASN ASN A . n A 1 59 ALA 59 250 250 ALA ALA A . n A 1 60 HIS 60 251 251 HIS HIS A . n A 1 61 GLU 61 252 252 GLU GLU A . n A 1 62 ARG 62 253 253 ARG ARG A . n A 1 63 SER 63 254 254 SER SER A . n A 1 64 TRP 64 255 255 TRP TRP A . n A 1 65 PRO 65 256 256 PRO PRO A . n A 1 66 GLN 66 257 257 GLN GLN A . n A 1 67 GLY 67 258 258 GLY GLY A . n A 1 68 LEU 68 259 259 LEU LEU A . n A 1 69 ALA 69 260 260 ALA ALA A . n A 1 70 THR 70 261 261 THR THR A . n A 1 71 LEU 71 262 262 LEU LEU A . n A 1 72 GLU 72 263 263 GLU GLU A . n A 1 73 THR 73 264 264 THR THR A . n A 1 74 ARG 74 265 265 ARG ARG A . n A 1 75 GLN 75 266 266 GLN GLN A . n A 1 76 MSE 76 267 267 MSE MSE A . n A 1 77 ASN 77 268 268 ASN ASN A . n A 1 78 ARG 78 269 269 ARG ARG A . n A 1 79 ARG 79 270 270 ARG ARG A . n A 1 80 TYR 80 271 271 TYR TYR A . n A 1 81 TYR 81 272 272 TYR TYR A . n A 1 82 GLU 82 273 273 GLU GLU A . n A 1 83 ASN 83 274 274 ASN ASN A . n A 1 84 TYR 84 275 275 TYR TYR A . n A 1 85 VAL 85 276 276 VAL VAL A . n A 1 86 ALA 86 277 277 ALA ALA A . n A 1 87 LYS 87 278 278 LYS LYS A . n A 1 88 ARG 88 279 279 ARG ARG A . n A 1 89 ILE 89 280 280 ILE ILE A . n A 1 90 PRO 90 281 281 PRO PRO A . n A 1 91 GLY 91 282 282 GLY GLY A . n A 1 92 LYS 92 283 283 LYS LYS A . n A 1 93 GLN 93 284 284 GLN GLN A . n A 1 94 ALA 94 285 285 ALA ALA A . n A 1 95 VAL 95 286 286 VAL VAL A . n A 1 96 VAL 96 287 287 VAL VAL A . n A 1 97 VAL 97 288 288 VAL VAL A . n A 1 98 MSE 98 289 289 MSE MSE A . n A 1 99 ALA 99 290 290 ALA ALA A . n A 1 100 CYS 100 291 291 CYS CYS A . n A 1 101 GLU 101 292 292 GLU GLU A . n A 1 102 ASN 102 293 293 ASN ASN A . n A 1 103 GLN 103 294 294 GLN GLN A . n A 1 104 HIS 104 295 295 HIS HIS A . n A 1 105 MSE 105 296 296 MSE MSE A . n A 1 106 GLY 106 297 297 GLY GLY A . n A 1 107 ASP 107 298 298 ASP ASP A . n A 1 108 ASP 108 299 299 ASP ASP A . n A 1 109 MSE 109 300 300 MSE MSE A . n A 1 110 VAL 110 301 301 VAL VAL A . n A 1 111 GLN 111 302 302 GLN GLN A . n A 1 112 GLU 112 303 303 GLU GLU A . n A 1 113 PRO 113 304 304 PRO PRO A . n A 1 114 GLY 114 305 305 GLY GLY A . n A 1 115 LEU 115 306 306 LEU LEU A . n A 1 116 VAL 116 307 307 VAL VAL A . n A 1 117 MSE 117 308 308 MSE MSE A . n A 1 118 ILE 118 309 309 ILE ILE A . n A 1 119 PHE 119 310 310 PHE PHE A . n A 1 120 ALA 120 311 311 ALA ALA A . n A 1 121 HIS 121 312 312 HIS HIS A . n A 1 122 GLY 122 313 313 GLY GLY A . n A 1 123 VAL 123 314 314 VAL VAL A . n A 1 124 GLU 124 315 315 GLU GLU A . n A 1 125 GLU 125 316 316 GLU GLU A . n A 1 126 ILE 126 317 317 ILE ILE A . n B 1 1 SER 1 0 0 SER SER B . n B 1 2 THR 2 193 193 THR THR B . n B 1 3 ILE 3 194 194 ILE ILE B . n B 1 4 GLU 4 195 195 GLU GLU B . n B 1 5 TYR 5 196 196 TYR TYR B . n B 1 6 ASN 6 197 197 ASN ASN B . n B 1 7 GLU 7 198 198 GLU GLU B . n B 1 8 ILE 8 199 199 ILE ILE B . n B 1 9 LEU 9 200 200 LEU LEU B . n B 1 10 GLU 10 201 201 GLU GLU B . n B 1 11 TRP 11 202 202 TRP TRP B . n B 1 12 VAL 12 203 203 VAL VAL B . n B 1 13 ASN 13 204 204 ASN ASN B . n B 1 14 SER 14 205 205 SER SER B . n B 1 15 LEU 15 206 206 LEU LEU B . n B 1 16 GLN 16 207 207 GLN GLN B . n B 1 17 PRO 17 208 208 PRO PRO B . n B 1 18 ALA 18 209 209 ALA ALA B . n B 1 19 ARG 19 210 210 ARG ARG B . n B 1 20 VAL 20 211 211 VAL VAL B . n B 1 21 THR 21 212 212 THR THR B . n B 1 22 ARG 22 213 213 ARG ARG B . n B 1 23 TRP 23 214 214 TRP TRP B . n B 1 24 GLY 24 215 215 GLY GLY B . n B 1 25 GLY 25 216 216 GLY GLY B . n B 1 26 MSE 26 217 217 MSE MSE B . n B 1 27 ILE 27 218 218 ILE ILE B . n B 1 28 SER 28 219 219 SER SER B . n B 1 29 THR 29 220 220 THR THR B . n B 1 30 PRO 30 221 221 PRO PRO B . n B 1 31 ASP 31 222 222 ASP ASP B . n B 1 32 ALA 32 223 223 ALA ALA B . n B 1 33 VAL 33 224 224 VAL VAL B . n B 1 34 LEU 34 225 225 LEU LEU B . n B 1 35 GLN 35 226 226 GLN GLN B . n B 1 36 ALA 36 227 227 ALA ALA B . n B 1 37 VAL 37 228 228 VAL VAL B . n B 1 38 ILE 38 229 229 ILE ILE B . n B 1 39 LYS 39 230 230 LYS LYS B . n B 1 40 ARG 40 231 231 ARG ARG B . n B 1 41 SER 41 232 232 SER SER B . n B 1 42 LEU 42 233 233 LEU LEU B . n B 1 43 VAL 43 234 234 VAL VAL B . n B 1 44 GLU 44 235 235 GLU GLU B . n B 1 45 SER 45 236 236 SER SER B . n B 1 46 GLY 46 237 237 GLY GLY B . n B 1 47 CYS 47 238 238 CYS CYS B . n B 1 48 PRO 48 239 239 PRO PRO B . n B 1 49 ALA 49 240 240 ALA ALA B . n B 1 50 SER 50 241 241 SER SER B . n B 1 51 ILE 51 242 242 ILE ILE B . n B 1 52 VAL 52 243 243 VAL VAL B . n B 1 53 ASN 53 244 244 ASN ASN B . n B 1 54 GLU 54 245 245 GLU GLU B . n B 1 55 LEU 55 246 246 LEU LEU B . n B 1 56 ILE 56 247 247 ILE ILE B . n B 1 57 GLU 57 248 248 GLU GLU B . n B 1 58 ASN 58 249 249 ASN ASN B . n B 1 59 ALA 59 250 250 ALA ALA B . n B 1 60 HIS 60 251 251 HIS HIS B . n B 1 61 GLU 61 252 252 GLU GLU B . n B 1 62 ARG 62 253 253 ARG ARG B . n B 1 63 SER 63 254 254 SER SER B . n B 1 64 TRP 64 255 255 TRP TRP B . n B 1 65 PRO 65 256 256 PRO PRO B . n B 1 66 GLN 66 257 257 GLN GLN B . n B 1 67 GLY 67 258 258 GLY GLY B . n B 1 68 LEU 68 259 259 LEU LEU B . n B 1 69 ALA 69 260 260 ALA ALA B . n B 1 70 THR 70 261 261 THR THR B . n B 1 71 LEU 71 262 262 LEU LEU B . n B 1 72 GLU 72 263 263 GLU GLU B . n B 1 73 THR 73 264 264 THR THR B . n B 1 74 ARG 74 265 265 ARG ARG B . n B 1 75 GLN 75 266 266 GLN GLN B . n B 1 76 MSE 76 267 267 MSE MSE B . n B 1 77 ASN 77 268 268 ASN ASN B . n B 1 78 ARG 78 269 269 ARG ARG B . n B 1 79 ARG 79 270 270 ARG ARG B . n B 1 80 TYR 80 271 271 TYR TYR B . n B 1 81 TYR 81 272 272 TYR TYR B . n B 1 82 GLU 82 273 273 GLU GLU B . n B 1 83 ASN 83 274 274 ASN ASN B . n B 1 84 TYR 84 275 275 TYR TYR B . n B 1 85 VAL 85 276 276 VAL VAL B . n B 1 86 ALA 86 277 277 ALA ALA B . n B 1 87 LYS 87 278 278 LYS LYS B . n B 1 88 ARG 88 279 279 ARG ARG B . n B 1 89 ILE 89 280 280 ILE ILE B . n B 1 90 PRO 90 281 281 PRO PRO B . n B 1 91 GLY 91 282 282 GLY GLY B . n B 1 92 LYS 92 283 283 LYS LYS B . n B 1 93 GLN 93 284 284 GLN GLN B . n B 1 94 ALA 94 285 285 ALA ALA B . n B 1 95 VAL 95 286 286 VAL VAL B . n B 1 96 VAL 96 287 287 VAL VAL B . n B 1 97 VAL 97 288 288 VAL VAL B . n B 1 98 MSE 98 289 289 MSE MSE B . n B 1 99 ALA 99 290 290 ALA ALA B . n B 1 100 CYS 100 291 291 CYS CYS B . n B 1 101 GLU 101 292 292 GLU GLU B . n B 1 102 ASN 102 293 293 ASN ASN B . n B 1 103 GLN 103 294 294 GLN GLN B . n B 1 104 HIS 104 295 295 HIS HIS B . n B 1 105 MSE 105 296 296 MSE MSE B . n B 1 106 GLY 106 297 297 GLY GLY B . n B 1 107 ASP 107 298 298 ASP ASP B . n B 1 108 ASP 108 299 299 ASP ASP B . n B 1 109 MSE 109 300 300 MSE MSE B . n B 1 110 VAL 110 301 301 VAL VAL B . n B 1 111 GLN 111 302 302 GLN GLN B . n B 1 112 GLU 112 303 303 GLU GLU B . n B 1 113 PRO 113 304 304 PRO PRO B . n B 1 114 GLY 114 305 305 GLY GLY B . n B 1 115 LEU 115 306 306 LEU LEU B . n B 1 116 VAL 116 307 307 VAL VAL B . n B 1 117 MSE 117 308 308 MSE MSE B . n B 1 118 ILE 118 309 309 ILE ILE B . n B 1 119 PHE 119 310 310 PHE PHE B . n B 1 120 ALA 120 311 311 ALA ALA B . n B 1 121 HIS 121 312 312 HIS HIS B . n B 1 122 GLY 122 313 313 GLY GLY B . n B 1 123 VAL 123 314 314 VAL VAL B . n B 1 124 GLU 124 315 315 GLU GLU B . n B 1 125 GLU 125 316 316 GLU GLU B . n B 1 126 ILE 126 317 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SCN 1 318 203 SCN SCN A . D 3 GOL 1 319 201 GOL GOL A . E 3 GOL 1 320 202 GOL GOL A . F 4 HOH 1 1 1 HOH HOH A . F 4 HOH 2 2 2 HOH HOH A . F 4 HOH 3 5 5 HOH HOH A . F 4 HOH 4 6 6 HOH HOH A . F 4 HOH 5 7 7 HOH HOH A . F 4 HOH 6 9 9 HOH HOH A . F 4 HOH 7 10 10 HOH HOH A . F 4 HOH 8 11 11 HOH HOH A . F 4 HOH 9 13 13 HOH HOH A . F 4 HOH 10 14 14 HOH HOH A . F 4 HOH 11 16 16 HOH HOH A . F 4 HOH 12 17 17 HOH HOH A . F 4 HOH 13 20 20 HOH HOH A . F 4 HOH 14 21 21 HOH HOH A . F 4 HOH 15 22 22 HOH HOH A . F 4 HOH 16 23 23 HOH HOH A . F 4 HOH 17 24 24 HOH HOH A . F 4 HOH 18 25 25 HOH HOH A . F 4 HOH 19 26 26 HOH HOH A . F 4 HOH 20 27 27 HOH HOH A . F 4 HOH 21 28 28 HOH HOH A . F 4 HOH 22 29 29 HOH HOH A . F 4 HOH 23 31 31 HOH HOH A . F 4 HOH 24 32 32 HOH HOH A . F 4 HOH 25 33 33 HOH HOH A . F 4 HOH 26 34 34 HOH HOH A . F 4 HOH 27 35 35 HOH HOH A . F 4 HOH 28 36 36 HOH HOH A . F 4 HOH 29 39 39 HOH HOH A . F 4 HOH 30 41 41 HOH HOH A . F 4 HOH 31 46 46 HOH HOH A . F 4 HOH 32 47 47 HOH HOH A . F 4 HOH 33 49 49 HOH HOH A . F 4 HOH 34 54 54 HOH HOH A . F 4 HOH 35 55 55 HOH HOH A . F 4 HOH 36 56 56 HOH HOH A . F 4 HOH 37 57 57 HOH HOH A . F 4 HOH 38 58 58 HOH HOH A . F 4 HOH 39 62 62 HOH HOH A . F 4 HOH 40 63 63 HOH HOH A . F 4 HOH 41 64 64 HOH HOH A . F 4 HOH 42 65 65 HOH HOH A . F 4 HOH 43 66 66 HOH HOH A . F 4 HOH 44 67 67 HOH HOH A . F 4 HOH 45 68 68 HOH HOH A . F 4 HOH 46 70 70 HOH HOH A . F 4 HOH 47 71 71 HOH HOH A . F 4 HOH 48 72 72 HOH HOH A . F 4 HOH 49 73 73 HOH HOH A . F 4 HOH 50 75 75 HOH HOH A . F 4 HOH 51 76 76 HOH HOH A . F 4 HOH 52 80 80 HOH HOH A . F 4 HOH 53 83 83 HOH HOH A . F 4 HOH 54 84 84 HOH HOH A . F 4 HOH 55 87 87 HOH HOH A . F 4 HOH 56 89 89 HOH HOH A . F 4 HOH 57 100 100 HOH HOH A . F 4 HOH 58 101 101 HOH HOH A . F 4 HOH 59 102 102 HOH HOH A . F 4 HOH 60 103 103 HOH HOH A . F 4 HOH 61 104 104 HOH HOH A . F 4 HOH 62 105 105 HOH HOH A . F 4 HOH 63 106 106 HOH HOH A . F 4 HOH 64 107 107 HOH HOH A . F 4 HOH 65 108 108 HOH HOH A . F 4 HOH 66 113 113 HOH HOH A . F 4 HOH 67 114 114 HOH HOH A . F 4 HOH 68 118 118 HOH HOH A . F 4 HOH 69 119 119 HOH HOH A . F 4 HOH 70 120 120 HOH HOH A . F 4 HOH 71 121 121 HOH HOH A . F 4 HOH 72 122 122 HOH HOH A . G 4 HOH 1 3 3 HOH HOH B . G 4 HOH 2 4 4 HOH HOH B . G 4 HOH 3 8 8 HOH HOH B . G 4 HOH 4 12 12 HOH HOH B . G 4 HOH 5 15 15 HOH HOH B . G 4 HOH 6 18 18 HOH HOH B . G 4 HOH 7 19 19 HOH HOH B . G 4 HOH 8 30 30 HOH HOH B . G 4 HOH 9 37 37 HOH HOH B . G 4 HOH 10 38 38 HOH HOH B . G 4 HOH 11 40 40 HOH HOH B . G 4 HOH 12 42 42 HOH HOH B . G 4 HOH 13 43 43 HOH HOH B . G 4 HOH 14 44 44 HOH HOH B . G 4 HOH 15 45 45 HOH HOH B . G 4 HOH 16 48 48 HOH HOH B . G 4 HOH 17 50 50 HOH HOH B . G 4 HOH 18 51 51 HOH HOH B . G 4 HOH 19 52 52 HOH HOH B . G 4 HOH 20 53 53 HOH HOH B . G 4 HOH 21 59 59 HOH HOH B . G 4 HOH 22 60 60 HOH HOH B . G 4 HOH 23 61 61 HOH HOH B . G 4 HOH 24 69 69 HOH HOH B . G 4 HOH 25 74 74 HOH HOH B . G 4 HOH 26 77 77 HOH HOH B . G 4 HOH 27 78 78 HOH HOH B . G 4 HOH 28 79 79 HOH HOH B . G 4 HOH 29 81 81 HOH HOH B . G 4 HOH 30 82 82 HOH HOH B . G 4 HOH 31 85 85 HOH HOH B . G 4 HOH 32 86 86 HOH HOH B . G 4 HOH 33 88 88 HOH HOH B . G 4 HOH 34 90 90 HOH HOH B . G 4 HOH 35 91 91 HOH HOH B . G 4 HOH 36 92 92 HOH HOH B . G 4 HOH 37 93 93 HOH HOH B . G 4 HOH 38 94 94 HOH HOH B . G 4 HOH 39 95 95 HOH HOH B . G 4 HOH 40 96 96 HOH HOH B . G 4 HOH 41 97 97 HOH HOH B . G 4 HOH 42 98 98 HOH HOH B . G 4 HOH 43 99 99 HOH HOH B . G 4 HOH 44 109 109 HOH HOH B . G 4 HOH 45 110 110 HOH HOH B . G 4 HOH 46 111 111 HOH HOH B . G 4 HOH 47 112 112 HOH HOH B . G 4 HOH 48 115 115 HOH HOH B . G 4 HOH 49 116 116 HOH HOH B . G 4 HOH 50 117 117 HOH HOH B . # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal DENZO . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data reduction' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 1 SCALEPACK . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data scaling' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 2 SOLVE 2.03 20-Sept-2002 package 'Tom Terwilliger' terwilliger@LANL.gov phasing http://www.solve.lanl.gov/ ? ? 3 RESOLVE 2.03 10-Aug-2002 package 'Terwilliger, T. C' terwilliger@LANL.gov phasing http://www.solve.lanl.gov/ ? ? 4 REFMAC . ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran_77 ? 5 PDB_EXTRACT 2.000 'April. 3, 2006' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 6 ADSC QUANTUM ? ? ? ? 'data collection' ? ? ? 7 # _cell.entry_id 2OGB _cell.length_a 157.427 _cell.length_b 58.227 _cell.length_c 37.387 _cell.angle_alpha 90.00 _cell.angle_beta 101.53 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2OGB _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # _exptl.crystals_number 1 _exptl.entry_id 2OGB _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.89 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 57.47 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 8.4 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details ;25% (w/v) polyethylene glycol 8000, 180 mM potassium thiocyanate, 100 mM Tris-HCl, pH 8.4, VAPOR DIFFUSION, HANGING DROP, temperature 293K ; _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2005-01-27 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'KOHZU double crystal monochromator' _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9792 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X4A' _diffrn_source.pdbx_wavelength 0.9792 _diffrn_source.pdbx_wavelength_list ? _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X4A # _reflns.entry_id 2OGB _reflns.d_resolution_high 1.950 _reflns.d_resolution_low 30.000 _reflns.number_obs 20628 _reflns.pdbx_Rmerge_I_obs 0.092 _reflns.pdbx_netI_over_sigmaI 25.300 _reflns.pdbx_chi_squared 0.993 _reflns.pdbx_redundancy 4.300 _reflns.percent_possible_obs 85.200 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.95 2.02 ? ? ? 0.336 ? ? 0.983 2.30 ? 1348 56.60 1 1 2.02 2.10 ? ? ? 0.286 ? ? 0.958 2.70 ? 1750 71.90 2 1 2.10 2.20 ? ? ? 0.252 ? ? 0.987 3.20 ? 2092 87.10 3 1 2.20 2.31 ? ? ? 0.193 ? ? 0.995 3.90 ? 2211 92.10 4 1 2.31 2.46 ? ? ? 0.162 ? ? 0.977 4.60 ? 2236 92.80 5 1 2.46 2.65 ? ? ? 0.147 ? ? 0.984 4.90 ? 2248 92.90 6 1 2.65 2.91 ? ? ? 0.12 ? ? 0.974 5.00 ? 2225 91.80 7 1 2.91 3.33 ? ? ? 0.095 ? ? 1.006 5.10 ? 2206 91.60 8 1 3.33 4.20 ? ? ? 0.075 ? ? 1.001 5.10 ? 2193 89.60 9 1 4.20 30.00 ? ? ? 0.077 ? ? 1.026 5.20 ? 2119 85.10 10 1 # _refine.entry_id 2OGB _refine.ls_d_res_high 1.950 _refine.ls_d_res_low 20.000 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 97.450 _refine.ls_number_reflns_obs 20090 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.ls_R_factor_obs 0.213 _refine.ls_R_factor_R_work 0.212 _refine.ls_R_factor_R_free 0.234 _refine.ls_percent_reflns_R_free 4.800 _refine.ls_number_reflns_R_free 972 _refine.B_iso_mean 43.318 _refine.aniso_B[1][1] 1.680 _refine.aniso_B[2][2] 0.460 _refine.aniso_B[3][3] -1.820 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.800 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.945 _refine.correlation_coeff_Fo_to_Fc_free 0.932 _refine.pdbx_overall_ESU_R 0.188 _refine.pdbx_overall_ESU_R_Free 0.155 _refine.overall_SU_ML 0.142 _refine.overall_SU_B 9.879 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.pdbx_solvent_vdw_probe_radii 1.400 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_all ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.details ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1960 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 15 _refine_hist.number_atoms_solvent 122 _refine_hist.number_atoms_total 2097 _refine_hist.d_res_high 1.950 _refine_hist.d_res_low 20.000 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 2010 0.016 0.022 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2722 1.373 1.950 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 245 1.463 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 98 38.263 24.490 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 346 9.979 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 16 15.593 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 299 0.092 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1530 0.007 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 974 0.281 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 1428 0.325 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 128 0.156 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 86 0.382 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 17 0.226 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1237 1.539 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1999 2.865 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 773 5.334 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 723 8.797 4.500 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.95 _refine_ls_shell.d_res_low 2.002 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 89.120 _refine_ls_shell.number_reflns_R_work 801 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.307 _refine_ls_shell.R_factor_R_free 0.342 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 43 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs 844 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2OGB _struct.title 'Crystal structure of the C-terminal domain of mouse Nrdp1' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2OGB _struct_keywords.pdbx_keywords LIGASE _struct_keywords.text 'E3 ubiquitin ligase, Receptor-binding region, LIGASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? F N N 4 ? G N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RNF41_MOUSE _struct_ref.pdbx_db_accession Q8BH75 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;TIEYNEILEWVNSLQPARVTRWGGMISTPDAVLQAVIKRSLVESGCPASIVNELIENAHERSWPQGLATLETRQMNRRYY ENYVAKRIPGKQAVVVMACENQHMGDDMVQEPGLVMIFAHGVEEI ; _struct_ref.pdbx_align_begin 193 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2OGB A 2 ? 126 ? Q8BH75 193 ? 317 ? 193 317 2 1 2OGB B 2 ? 126 ? Q8BH75 193 ? 317 ? 193 317 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2OGB SER A 1 ? UNP Q8BH75 ? ? 'cloning artifact' 0 1 1 2OGB MSE A 26 ? UNP Q8BH75 MET 217 'modified residue' 217 2 1 2OGB MSE A 76 ? UNP Q8BH75 MET 267 'modified residue' 267 3 1 2OGB MSE A 98 ? UNP Q8BH75 MET 289 'modified residue' 289 4 1 2OGB MSE A 105 ? UNP Q8BH75 MET 296 'modified residue' 296 5 1 2OGB MSE A 109 ? UNP Q8BH75 MET 300 'modified residue' 300 6 1 2OGB MSE A 117 ? UNP Q8BH75 MET 308 'modified residue' 308 7 2 2OGB SER B 1 ? UNP Q8BH75 ? ? 'cloning artifact' 0 8 2 2OGB MSE B 26 ? UNP Q8BH75 MET 217 'modified residue' 217 9 2 2OGB MSE B 76 ? UNP Q8BH75 MET 267 'modified residue' 267 10 2 2OGB MSE B 98 ? UNP Q8BH75 MET 289 'modified residue' 289 11 2 2OGB MSE B 105 ? UNP Q8BH75 MET 296 'modified residue' 296 12 2 2OGB MSE B 109 ? UNP Q8BH75 MET 300 'modified residue' 300 13 2 2OGB MSE B 117 ? UNP Q8BH75 MET 308 'modified residue' 308 14 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA monomeric 1 2 author_defined_assembly ? monomeric 1 3 software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 3 'ABSA (A^2)' 1390 ? 3 MORE -10 ? 3 'SSA (A^2)' 12830 ? # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,D,E,F 2 1 B,G 3 1,2 B,G # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_555 -x,y,-z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLU A 4 ? LEU A 15 ? GLU A 195 LEU A 206 1 ? 12 HELX_P HELX_P2 2 ARG A 22 ? MSE A 26 ? ARG A 213 MSE A 217 5 ? 5 HELX_P HELX_P3 3 ASP A 31 ? SER A 45 ? ASP A 222 SER A 236 1 ? 15 HELX_P HELX_P4 4 PRO A 48 ? ASN A 58 ? PRO A 239 ASN A 249 1 ? 11 HELX_P HELX_P5 5 ALA A 59 ? TRP A 64 ? ALA A 250 TRP A 255 5 ? 6 HELX_P HELX_P6 6 THR A 70 ? ASN A 77 ? THR A 261 ASN A 268 1 ? 8 HELX_P HELX_P7 7 ASN A 77 ? GLU A 82 ? ASN A 268 GLU A 273 1 ? 6 HELX_P HELX_P8 8 CYS A 100 ? ASN A 102 ? CYS A 291 ASN A 293 5 ? 3 HELX_P HELX_P9 9 SER B 1 ? LEU B 15 ? SER B 0 LEU B 206 1 ? 15 HELX_P HELX_P10 10 ARG B 22 ? MSE B 26 ? ARG B 213 MSE B 217 5 ? 5 HELX_P HELX_P11 11 ASP B 31 ? SER B 45 ? ASP B 222 SER B 236 1 ? 15 HELX_P HELX_P12 12 ILE B 51 ? ASN B 58 ? ILE B 242 ASN B 249 1 ? 8 HELX_P HELX_P13 13 ALA B 59 ? TRP B 64 ? ALA B 250 TRP B 255 5 ? 6 HELX_P HELX_P14 14 THR B 70 ? ASN B 77 ? THR B 261 ASN B 268 1 ? 8 HELX_P HELX_P15 15 ARG B 79 ? TYR B 84 ? ARG B 270 TYR B 275 5 ? 6 HELX_P HELX_P16 16 CYS B 100 ? ASN B 102 ? CYS B 291 ASN B 293 5 ? 3 HELX_P HELX_P17 17 GLY B 106 ? VAL B 110 ? GLY B 297 VAL B 301 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A GLY 25 C ? ? ? 1_555 A MSE 26 N ? ? A GLY 216 A MSE 217 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale2 covale both ? A MSE 26 C ? ? ? 1_555 A ILE 27 N ? ? A MSE 217 A ILE 218 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale3 covale both ? A GLN 75 C ? ? ? 1_555 A MSE 76 N ? ? A GLN 266 A MSE 267 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale4 covale both ? A MSE 76 C ? ? ? 1_555 A ASN 77 N ? ? A MSE 267 A ASN 268 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale5 covale both ? A VAL 97 C ? ? ? 1_555 A MSE 98 N ? ? A VAL 288 A MSE 289 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale6 covale both ? A MSE 98 C ? ? ? 1_555 A ALA 99 N ? ? A MSE 289 A ALA 290 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale7 covale both ? A HIS 104 C ? ? ? 1_555 A MSE 105 N ? ? A HIS 295 A MSE 296 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale8 covale both ? A MSE 105 C ? ? ? 1_555 A GLY 106 N ? ? A MSE 296 A GLY 297 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale9 covale both ? A ASP 108 C ? ? ? 1_555 A MSE 109 N ? ? A ASP 299 A MSE 300 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale10 covale both ? A MSE 109 C ? ? ? 1_555 A VAL 110 N ? ? A MSE 300 A VAL 301 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale11 covale both ? A VAL 116 C ? ? ? 1_555 A MSE 117 N ? ? A VAL 307 A MSE 308 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale12 covale both ? A MSE 117 C ? ? ? 1_555 A ILE 118 N ? ? A MSE 308 A ILE 309 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale13 covale both ? B GLY 25 C ? ? ? 1_555 B MSE 26 N ? ? B GLY 216 B MSE 217 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale14 covale both ? B MSE 26 C ? ? ? 1_555 B ILE 27 N ? ? B MSE 217 B ILE 218 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale15 covale both ? B GLN 75 C ? ? ? 1_555 B MSE 76 N ? ? B GLN 266 B MSE 267 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale16 covale both ? B MSE 76 C ? ? ? 1_555 B ASN 77 N ? ? B MSE 267 B ASN 268 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale17 covale both ? B VAL 97 C ? ? ? 1_555 B MSE 98 N ? ? B VAL 288 B MSE 289 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale18 covale both ? B MSE 98 C ? ? ? 1_555 B ALA 99 N ? ? B MSE 289 B ALA 290 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale19 covale both ? B HIS 104 C ? ? ? 1_555 B MSE 105 N ? ? B HIS 295 B MSE 296 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale20 covale both ? B MSE 105 C ? ? ? 1_555 B GLY 106 N ? ? B MSE 296 B GLY 297 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale21 covale both ? B ASP 108 C ? ? ? 1_555 B MSE 109 N ? ? B ASP 299 B MSE 300 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale22 covale both ? B MSE 109 C ? ? ? 1_555 B VAL 110 N ? ? B MSE 300 B VAL 301 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale23 covale both ? B VAL 116 C ? ? ? 1_555 B MSE 117 N ? ? B VAL 307 B MSE 308 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale24 covale both ? B MSE 117 C ? ? ? 1_555 B ILE 118 N ? ? B MSE 308 B ILE 309 1_555 ? ? ? ? ? ? ? 1.326 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 MSE A 26 ? . . . . MSE A 217 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 2 MSE A 76 ? . . . . MSE A 267 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 3 MSE A 98 ? . . . . MSE A 289 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 4 MSE A 105 ? . . . . MSE A 296 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 5 MSE A 109 ? . . . . MSE A 300 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 6 MSE A 117 ? . . . . MSE A 308 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 7 MSE B 26 ? . . . . MSE B 217 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 8 MSE B 76 ? . . . . MSE B 267 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 9 MSE B 98 ? . . . . MSE B 289 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 10 MSE B 105 ? . . . . MSE B 296 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 11 MSE B 109 ? . . . . MSE B 300 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 12 MSE B 117 ? . . . . MSE B 308 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 GLU 112 A . ? GLU 303 A PRO 113 A ? PRO 304 A 1 2.11 2 GLU 112 B . ? GLU 303 B PRO 113 B ? PRO 304 B 1 6.38 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 3 ? C ? 2 ? D ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel C 1 2 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ALA A 18 ? VAL A 20 ? ALA A 209 VAL A 211 A 2 VAL A 123 ? GLU A 125 ? VAL A 314 GLU A 316 B 1 LYS A 87 ? ARG A 88 ? LYS A 278 ARG A 279 B 2 ALA A 94 ? MSE A 98 ? ALA A 285 MSE A 289 B 3 GLY A 114 ? ILE A 118 ? GLY A 305 ILE A 309 C 1 ARG B 19 ? VAL B 20 ? ARG B 210 VAL B 211 C 2 VAL B 123 ? GLU B 124 ? VAL B 314 GLU B 315 D 1 LYS B 87 ? ARG B 88 ? LYS B 278 ARG B 279 D 2 ALA B 94 ? MSE B 98 ? ALA B 285 MSE B 289 D 3 GLY B 114 ? ILE B 118 ? GLY B 305 ILE B 309 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ARG A 19 ? N ARG A 210 O GLU A 124 ? O GLU A 315 B 1 2 N LYS A 87 ? N LYS A 278 O VAL A 96 ? O VAL A 287 B 2 3 N VAL A 97 ? N VAL A 288 O LEU A 115 ? O LEU A 306 C 1 2 N ARG B 19 ? N ARG B 210 O GLU B 124 ? O GLU B 315 D 1 2 N LYS B 87 ? N LYS B 278 O VAL B 96 ? O VAL B 287 D 2 3 N VAL B 97 ? N VAL B 288 O LEU B 115 ? O LEU B 306 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A SCN 318 ? 4 'BINDING SITE FOR RESIDUE SCN A 318' AC2 Software A GOL 319 ? 5 'BINDING SITE FOR RESIDUE GOL A 319' AC3 Software A GOL 320 ? 6 'BINDING SITE FOR RESIDUE GOL A 320' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 HOH F . ? HOH A 114 . ? 1_555 ? 2 AC1 4 HOH F . ? HOH A 122 . ? 4_445 ? 3 AC1 4 PRO A 113 ? PRO A 304 . ? 4_445 ? 4 AC1 4 HIS A 121 ? HIS A 312 . ? 1_555 ? 5 AC2 5 HOH F . ? HOH A 102 . ? 4_445 ? 6 AC2 5 ARG A 40 ? ARG A 231 . ? 1_555 ? 7 AC2 5 HIS A 104 ? HIS A 295 . ? 4_445 ? 8 AC2 5 ASP B 31 ? ASP B 222 . ? 1_555 ? 9 AC2 5 VAL B 33 ? VAL B 224 . ? 1_555 ? 10 AC3 6 GLN A 93 ? GLN A 284 . ? 1_555 ? 11 AC3 6 GLU A 112 ? GLU A 303 . ? 4_445 ? 12 AC3 6 HIS A 121 ? HIS A 312 . ? 1_555 ? 13 AC3 6 GLY A 122 ? GLY A 313 . ? 1_555 ? 14 AC3 6 VAL A 123 ? VAL A 314 . ? 1_555 ? 15 AC3 6 GLU A 124 ? GLU A 315 . ? 1_555 ? # _pdbx_entry_details.entry_id 2OGB _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 N _pdbx_validate_symm_contact.auth_asym_id_1 B _pdbx_validate_symm_contact.auth_comp_id_1 THR _pdbx_validate_symm_contact.auth_seq_id_1 193 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 OE2 _pdbx_validate_symm_contact.auth_asym_id_2 B _pdbx_validate_symm_contact.auth_comp_id_2 GLU _pdbx_validate_symm_contact.auth_seq_id_2 303 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 2_555 _pdbx_validate_symm_contact.dist 2.15 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 C A GLN 207 ? ? N A PRO 208 ? ? 1.160 1.338 -0.178 0.019 Y 2 1 C A THR 220 ? ? N A PRO 221 ? ? 1.186 1.338 -0.152 0.019 Y 3 1 C A CYS 238 ? ? N A PRO 239 ? ? 1.151 1.338 -0.187 0.019 Y 4 1 C A TRP 255 ? ? N A PRO 256 ? ? 1.171 1.338 -0.167 0.019 Y 5 1 C A ILE 280 ? ? N A PRO 281 ? ? 1.163 1.338 -0.175 0.019 Y 6 1 C A GLU 303 ? ? N A PRO 304 ? ? 1.197 1.338 -0.141 0.019 Y 7 1 C B GLN 207 ? ? N B PRO 208 ? ? 1.146 1.338 -0.192 0.019 Y 8 1 C B THR 220 ? ? N B PRO 221 ? ? 1.157 1.338 -0.181 0.019 Y 9 1 C B CYS 238 ? ? N B PRO 239 ? ? 1.153 1.338 -0.185 0.019 Y 10 1 C B TRP 255 ? ? N B PRO 256 ? ? 1.149 1.338 -0.189 0.019 Y 11 1 C B ILE 280 ? ? N B PRO 281 ? ? 1.154 1.338 -0.184 0.019 Y 12 1 C B GLU 303 ? ? N B PRO 304 ? ? 1.148 1.338 -0.190 0.019 Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 249 ? ? -93.28 35.07 2 1 ARG A 253 ? ? -43.19 -19.89 3 1 LEU B 259 ? ? -142.06 -6.15 4 1 CYS B 291 ? ? -51.77 -9.54 # loop_ _pdbx_validate_polymer_linkage.id _pdbx_validate_polymer_linkage.PDB_model_num _pdbx_validate_polymer_linkage.auth_atom_id_1 _pdbx_validate_polymer_linkage.auth_asym_id_1 _pdbx_validate_polymer_linkage.auth_comp_id_1 _pdbx_validate_polymer_linkage.auth_seq_id_1 _pdbx_validate_polymer_linkage.PDB_ins_code_1 _pdbx_validate_polymer_linkage.label_alt_id_1 _pdbx_validate_polymer_linkage.auth_atom_id_2 _pdbx_validate_polymer_linkage.auth_asym_id_2 _pdbx_validate_polymer_linkage.auth_comp_id_2 _pdbx_validate_polymer_linkage.auth_seq_id_2 _pdbx_validate_polymer_linkage.PDB_ins_code_2 _pdbx_validate_polymer_linkage.label_alt_id_2 _pdbx_validate_polymer_linkage.dist 1 1 C A GLN 207 ? ? N A PRO 208 ? ? 1.16 2 1 C A THR 220 ? ? N A PRO 221 ? ? 1.19 3 1 C A CYS 238 ? ? N A PRO 239 ? ? 1.15 4 1 C A TRP 255 ? ? N A PRO 256 ? ? 1.17 5 1 C A ILE 280 ? ? N A PRO 281 ? ? 1.16 6 1 C A GLU 303 ? ? N A PRO 304 ? ? 1.20 7 1 C B GLN 207 ? ? N B PRO 208 ? ? 1.15 8 1 C B THR 220 ? ? N B PRO 221 ? ? 1.16 9 1 C B CYS 238 ? ? N B PRO 239 ? ? 1.15 10 1 C B TRP 255 ? ? N B PRO 256 ? ? 1.15 11 1 C B ILE 280 ? ? N B PRO 281 ? ? 1.15 12 1 C B GLU 303 ? ? N B PRO 304 ? ? 1.15 # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 26 A MSE 217 ? MET SELENOMETHIONINE 2 A MSE 76 A MSE 267 ? MET SELENOMETHIONINE 3 A MSE 98 A MSE 289 ? MET SELENOMETHIONINE 4 A MSE 105 A MSE 296 ? MET SELENOMETHIONINE 5 A MSE 109 A MSE 300 ? MET SELENOMETHIONINE 6 A MSE 117 A MSE 308 ? MET SELENOMETHIONINE 7 B MSE 26 B MSE 217 ? MET SELENOMETHIONINE 8 B MSE 76 B MSE 267 ? MET SELENOMETHIONINE 9 B MSE 98 B MSE 289 ? MET SELENOMETHIONINE 10 B MSE 105 B MSE 296 ? MET SELENOMETHIONINE 11 B MSE 109 B MSE 300 ? MET SELENOMETHIONINE 12 B MSE 117 B MSE 308 ? MET SELENOMETHIONINE # _diffrn_reflns.diffrn_id 1 _diffrn_reflns.pdbx_d_res_high 2.000 _diffrn_reflns.pdbx_d_res_low 30.000 _diffrn_reflns.pdbx_number_obs 19750 _diffrn_reflns.pdbx_Rmerge_I_obs 0.092 _diffrn_reflns.pdbx_Rsym_value ? _diffrn_reflns.pdbx_chi_squared 1.01 _diffrn_reflns.av_sigmaI_over_netI 26.10 _diffrn_reflns.pdbx_redundancy 4.50 _diffrn_reflns.pdbx_percent_possible_obs 86.90 _diffrn_reflns.number 89260 _diffrn_reflns.pdbx_observed_criterion ? _diffrn_reflns.limit_h_max ? _diffrn_reflns.limit_h_min ? _diffrn_reflns.limit_k_max ? _diffrn_reflns.limit_k_min ? _diffrn_reflns.limit_l_max ? _diffrn_reflns.limit_l_min ? # loop_ _pdbx_diffrn_reflns_shell.diffrn_id _pdbx_diffrn_reflns_shell.d_res_high _pdbx_diffrn_reflns_shell.d_res_low _pdbx_diffrn_reflns_shell.number_obs _pdbx_diffrn_reflns_shell.rejects _pdbx_diffrn_reflns_shell.Rmerge_I_obs _pdbx_diffrn_reflns_shell.Rsym_value _pdbx_diffrn_reflns_shell.chi_squared _pdbx_diffrn_reflns_shell.redundancy _pdbx_diffrn_reflns_shell.percent_possible_obs 1 4.31 30.00 ? ? 0.078 ? 0.961 5.30 85.50 1 3.42 4.31 ? ? 0.074 ? 0.883 5.30 89.50 1 2.99 3.42 ? ? 0.092 ? 0.948 5.20 91.90 1 2.71 2.99 ? ? 0.117 ? 0.937 5.20 92.20 1 2.52 2.71 ? ? 0.143 ? 1.008 5.10 92.30 1 2.37 2.52 ? ? 0.158 ? 1.079 4.90 93.10 1 2.25 2.37 ? ? 0.183 ? 1.155 4.20 92.70 1 2.15 2.25 ? ? 0.227 ? 1.139 3.70 91.00 1 2.07 2.15 ? ? 0.275 ? 1.136 2.90 79.70 1 2.00 2.07 ? ? 0.306 ? 1.094 2.40 60.90 # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.pdbx_refine_id 1 ? refined -38.6290 -0.4460 1.4330 -0.2509 -0.2796 -0.1915 0.0061 -0.0143 0.0009 1.8674 4.2253 3.1592 -2.0104 -1.4329 2.4997 -0.0641 0.0978 -0.0338 -0.1869 0.0622 -0.0424 0.0886 -0.0152 0.0540 'X-RAY DIFFRACTION' 2 ? refined -14.6770 -21.7330 -13.2270 -0.2211 -0.0405 -0.1870 0.0497 -0.0370 -0.0160 3.4371 2.4146 4.9036 -0.3525 -0.7083 -0.4662 0.0016 -0.0038 0.0022 0.0488 -0.0899 -0.2133 -0.1765 0.2958 0.8959 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 A 7 A 105 ALL A 198 A 296 'X-RAY DIFFRACTION' ? 2 1 A 115 A 123 ALL A 306 A 314 'X-RAY DIFFRACTION' ? 3 2 B 7 B 105 ALL B 198 B 296 'X-RAY DIFFRACTION' ? 4 2 B 115 B 123 ALL B 306 B 314 'X-RAY DIFFRACTION' ? # loop_ _pdbx_phasing_MAD_set_site.id _pdbx_phasing_MAD_set_site.atom_type_symbol _pdbx_phasing_MAD_set_site.occupancy _pdbx_phasing_MAD_set_site.fract_x _pdbx_phasing_MAD_set_site.fract_y _pdbx_phasing_MAD_set_site.fract_z _pdbx_phasing_MAD_set_site.b_iso 1 Se 0.920 0.255 0.498 0.166 26.532 2 Se 0.938 0.728 0.146 0.221 25.319 3 Se 0.906 0.433 0.149 0.378 41.582 4 Se 0.992 0.446 0.056 0.469 44.520 5 Se 0.683 0.268 0.449 0.228 25.730 6 Se 0.924 0.372 0.155 0.445 46.678 7 Se 0.797 0.246 0.112 0.112 35.932 8 Se 0.646 0.763 0.112 0.327 30.060 9 Se 1.090 0.413 0.182 0.140 54.188 10 Se 1.121 0.610 0.127 0.478 53.651 11 Se 0.874 0.566 0.129 0.185 43.139 12 Se 0.711 0.216 0.031 0.390 46.276 # _pdbx_phasing_dm.entry_id 2OGB _pdbx_phasing_dm.fom_acentric 0.600 _pdbx_phasing_dm.fom_centric 0.500 _pdbx_phasing_dm.fom 0.600 _pdbx_phasing_dm.reflns_acentric 14480 _pdbx_phasing_dm.reflns_centric 718 _pdbx_phasing_dm.reflns 15198 # loop_ _pdbx_phasing_dm_shell.d_res_high _pdbx_phasing_dm_shell.d_res_low _pdbx_phasing_dm_shell.delta_phi_final _pdbx_phasing_dm_shell.delta_phi_initial _pdbx_phasing_dm_shell.fom_acentric _pdbx_phasing_dm_shell.fom_centric _pdbx_phasing_dm_shell.fom _pdbx_phasing_dm_shell.reflns_acentric _pdbx_phasing_dm_shell.reflns_centric _pdbx_phasing_dm_shell.reflns 6.300 29.680 ? ? 0.890 0.670 0.860 534 81 615 3.900 6.300 ? ? 0.890 0.730 0.870 1872 143 2015 3.100 3.900 ? ? 0.810 0.600 0.800 2425 128 2553 2.800 3.100 ? ? 0.650 0.440 0.640 2515 119 2634 2.400 2.800 ? ? 0.480 0.330 0.480 4447 159 4606 2.200 2.400 ? ? 0.320 0.220 0.320 2687 88 2775 # _phasing.method SAD # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 0 ? A SER 1 2 1 Y 1 A THR 193 ? A THR 2 3 1 Y 1 A ILE 194 ? A ILE 3 4 1 Y 1 B ILE 317 ? B ILE 126 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 GOL C1 C N N 137 GOL O1 O N N 138 GOL C2 C N N 139 GOL O2 O N N 140 GOL C3 C N N 141 GOL O3 O N N 142 GOL H11 H N N 143 GOL H12 H N N 144 GOL HO1 H N N 145 GOL H2 H N N 146 GOL HO2 H N N 147 GOL H31 H N N 148 GOL H32 H N N 149 GOL HO3 H N N 150 HIS N N N N 151 HIS CA C N S 152 HIS C C N N 153 HIS O O N N 154 HIS CB C N N 155 HIS CG C Y N 156 HIS ND1 N Y N 157 HIS CD2 C Y N 158 HIS CE1 C Y N 159 HIS NE2 N Y N 160 HIS OXT O N N 161 HIS H H N N 162 HIS H2 H N N 163 HIS HA H N N 164 HIS HB2 H N N 165 HIS HB3 H N N 166 HIS HD1 H N N 167 HIS HD2 H N N 168 HIS HE1 H N N 169 HIS HE2 H N N 170 HIS HXT H N N 171 HOH O O N N 172 HOH H1 H N N 173 HOH H2 H N N 174 ILE N N N N 175 ILE CA C N S 176 ILE C C N N 177 ILE O O N N 178 ILE CB C N S 179 ILE CG1 C N N 180 ILE CG2 C N N 181 ILE CD1 C N N 182 ILE OXT O N N 183 ILE H H N N 184 ILE H2 H N N 185 ILE HA H N N 186 ILE HB H N N 187 ILE HG12 H N N 188 ILE HG13 H N N 189 ILE HG21 H N N 190 ILE HG22 H N N 191 ILE HG23 H N N 192 ILE HD11 H N N 193 ILE HD12 H N N 194 ILE HD13 H N N 195 ILE HXT H N N 196 LEU N N N N 197 LEU CA C N S 198 LEU C C N N 199 LEU O O N N 200 LEU CB C N N 201 LEU CG C N N 202 LEU CD1 C N N 203 LEU CD2 C N N 204 LEU OXT O N N 205 LEU H H N N 206 LEU H2 H N N 207 LEU HA H N N 208 LEU HB2 H N N 209 LEU HB3 H N N 210 LEU HG H N N 211 LEU HD11 H N N 212 LEU HD12 H N N 213 LEU HD13 H N N 214 LEU HD21 H N N 215 LEU HD22 H N N 216 LEU HD23 H N N 217 LEU HXT H N N 218 LYS N N N N 219 LYS CA C N S 220 LYS C C N N 221 LYS O O N N 222 LYS CB C N N 223 LYS CG C N N 224 LYS CD C N N 225 LYS CE C N N 226 LYS NZ N N N 227 LYS OXT O N N 228 LYS H H N N 229 LYS H2 H N N 230 LYS HA H N N 231 LYS HB2 H N N 232 LYS HB3 H N N 233 LYS HG2 H N N 234 LYS HG3 H N N 235 LYS HD2 H N N 236 LYS HD3 H N N 237 LYS HE2 H N N 238 LYS HE3 H N N 239 LYS HZ1 H N N 240 LYS HZ2 H N N 241 LYS HZ3 H N N 242 LYS HXT H N N 243 MET N N N N 244 MET CA C N S 245 MET C C N N 246 MET O O N N 247 MET CB C N N 248 MET CG C N N 249 MET SD S N N 250 MET CE C N N 251 MET OXT O N N 252 MET H H N N 253 MET H2 H N N 254 MET HA H N N 255 MET HB2 H N N 256 MET HB3 H N N 257 MET HG2 H N N 258 MET HG3 H N N 259 MET HE1 H N N 260 MET HE2 H N N 261 MET HE3 H N N 262 MET HXT H N N 263 MSE N N N N 264 MSE CA C N S 265 MSE C C N N 266 MSE O O N N 267 MSE OXT O N N 268 MSE CB C N N 269 MSE CG C N N 270 MSE SE SE N N 271 MSE CE C N N 272 MSE H H N N 273 MSE H2 H N N 274 MSE HA H N N 275 MSE HXT H N N 276 MSE HB2 H N N 277 MSE HB3 H N N 278 MSE HG2 H N N 279 MSE HG3 H N N 280 MSE HE1 H N N 281 MSE HE2 H N N 282 MSE HE3 H N N 283 PHE N N N N 284 PHE CA C N S 285 PHE C C N N 286 PHE O O N N 287 PHE CB C N N 288 PHE CG C Y N 289 PHE CD1 C Y N 290 PHE CD2 C Y N 291 PHE CE1 C Y N 292 PHE CE2 C Y N 293 PHE CZ C Y N 294 PHE OXT O N N 295 PHE H H N N 296 PHE H2 H N N 297 PHE HA H N N 298 PHE HB2 H N N 299 PHE HB3 H N N 300 PHE HD1 H N N 301 PHE HD2 H N N 302 PHE HE1 H N N 303 PHE HE2 H N N 304 PHE HZ H N N 305 PHE HXT H N N 306 PRO N N N N 307 PRO CA C N S 308 PRO C C N N 309 PRO O O N N 310 PRO CB C N N 311 PRO CG C N N 312 PRO CD C N N 313 PRO OXT O N N 314 PRO H H N N 315 PRO HA H N N 316 PRO HB2 H N N 317 PRO HB3 H N N 318 PRO HG2 H N N 319 PRO HG3 H N N 320 PRO HD2 H N N 321 PRO HD3 H N N 322 PRO HXT H N N 323 SCN S S N N 324 SCN C C N N 325 SCN N N N N 326 SER N N N N 327 SER CA C N S 328 SER C C N N 329 SER O O N N 330 SER CB C N N 331 SER OG O N N 332 SER OXT O N N 333 SER H H N N 334 SER H2 H N N 335 SER HA H N N 336 SER HB2 H N N 337 SER HB3 H N N 338 SER HG H N N 339 SER HXT H N N 340 THR N N N N 341 THR CA C N S 342 THR C C N N 343 THR O O N N 344 THR CB C N R 345 THR OG1 O N N 346 THR CG2 C N N 347 THR OXT O N N 348 THR H H N N 349 THR H2 H N N 350 THR HA H N N 351 THR HB H N N 352 THR HG1 H N N 353 THR HG21 H N N 354 THR HG22 H N N 355 THR HG23 H N N 356 THR HXT H N N 357 TRP N N N N 358 TRP CA C N S 359 TRP C C N N 360 TRP O O N N 361 TRP CB C N N 362 TRP CG C Y N 363 TRP CD1 C Y N 364 TRP CD2 C Y N 365 TRP NE1 N Y N 366 TRP CE2 C Y N 367 TRP CE3 C Y N 368 TRP CZ2 C Y N 369 TRP CZ3 C Y N 370 TRP CH2 C Y N 371 TRP OXT O N N 372 TRP H H N N 373 TRP H2 H N N 374 TRP HA H N N 375 TRP HB2 H N N 376 TRP HB3 H N N 377 TRP HD1 H N N 378 TRP HE1 H N N 379 TRP HE3 H N N 380 TRP HZ2 H N N 381 TRP HZ3 H N N 382 TRP HH2 H N N 383 TRP HXT H N N 384 TYR N N N N 385 TYR CA C N S 386 TYR C C N N 387 TYR O O N N 388 TYR CB C N N 389 TYR CG C Y N 390 TYR CD1 C Y N 391 TYR CD2 C Y N 392 TYR CE1 C Y N 393 TYR CE2 C Y N 394 TYR CZ C Y N 395 TYR OH O N N 396 TYR OXT O N N 397 TYR H H N N 398 TYR H2 H N N 399 TYR HA H N N 400 TYR HB2 H N N 401 TYR HB3 H N N 402 TYR HD1 H N N 403 TYR HD2 H N N 404 TYR HE1 H N N 405 TYR HE2 H N N 406 TYR HH H N N 407 TYR HXT H N N 408 VAL N N N N 409 VAL CA C N S 410 VAL C C N N 411 VAL O O N N 412 VAL CB C N N 413 VAL CG1 C N N 414 VAL CG2 C N N 415 VAL OXT O N N 416 VAL H H N N 417 VAL H2 H N N 418 VAL HA H N N 419 VAL HB H N N 420 VAL HG11 H N N 421 VAL HG12 H N N 422 VAL HG13 H N N 423 VAL HG21 H N N 424 VAL HG22 H N N 425 VAL HG23 H N N 426 VAL HXT H N N 427 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 GOL C1 O1 sing N N 129 GOL C1 C2 sing N N 130 GOL C1 H11 sing N N 131 GOL C1 H12 sing N N 132 GOL O1 HO1 sing N N 133 GOL C2 O2 sing N N 134 GOL C2 C3 sing N N 135 GOL C2 H2 sing N N 136 GOL O2 HO2 sing N N 137 GOL C3 O3 sing N N 138 GOL C3 H31 sing N N 139 GOL C3 H32 sing N N 140 GOL O3 HO3 sing N N 141 HIS N CA sing N N 142 HIS N H sing N N 143 HIS N H2 sing N N 144 HIS CA C sing N N 145 HIS CA CB sing N N 146 HIS CA HA sing N N 147 HIS C O doub N N 148 HIS C OXT sing N N 149 HIS CB CG sing N N 150 HIS CB HB2 sing N N 151 HIS CB HB3 sing N N 152 HIS CG ND1 sing Y N 153 HIS CG CD2 doub Y N 154 HIS ND1 CE1 doub Y N 155 HIS ND1 HD1 sing N N 156 HIS CD2 NE2 sing Y N 157 HIS CD2 HD2 sing N N 158 HIS CE1 NE2 sing Y N 159 HIS CE1 HE1 sing N N 160 HIS NE2 HE2 sing N N 161 HIS OXT HXT sing N N 162 HOH O H1 sing N N 163 HOH O H2 sing N N 164 ILE N CA sing N N 165 ILE N H sing N N 166 ILE N H2 sing N N 167 ILE CA C sing N N 168 ILE CA CB sing N N 169 ILE CA HA sing N N 170 ILE C O doub N N 171 ILE C OXT sing N N 172 ILE CB CG1 sing N N 173 ILE CB CG2 sing N N 174 ILE CB HB sing N N 175 ILE CG1 CD1 sing N N 176 ILE CG1 HG12 sing N N 177 ILE CG1 HG13 sing N N 178 ILE CG2 HG21 sing N N 179 ILE CG2 HG22 sing N N 180 ILE CG2 HG23 sing N N 181 ILE CD1 HD11 sing N N 182 ILE CD1 HD12 sing N N 183 ILE CD1 HD13 sing N N 184 ILE OXT HXT sing N N 185 LEU N CA sing N N 186 LEU N H sing N N 187 LEU N H2 sing N N 188 LEU CA C sing N N 189 LEU CA CB sing N N 190 LEU CA HA sing N N 191 LEU C O doub N N 192 LEU C OXT sing N N 193 LEU CB CG sing N N 194 LEU CB HB2 sing N N 195 LEU CB HB3 sing N N 196 LEU CG CD1 sing N N 197 LEU CG CD2 sing N N 198 LEU CG HG sing N N 199 LEU CD1 HD11 sing N N 200 LEU CD1 HD12 sing N N 201 LEU CD1 HD13 sing N N 202 LEU CD2 HD21 sing N N 203 LEU CD2 HD22 sing N N 204 LEU CD2 HD23 sing N N 205 LEU OXT HXT sing N N 206 LYS N CA sing N N 207 LYS N H sing N N 208 LYS N H2 sing N N 209 LYS CA C sing N N 210 LYS CA CB sing N N 211 LYS CA HA sing N N 212 LYS C O doub N N 213 LYS C OXT sing N N 214 LYS CB CG sing N N 215 LYS CB HB2 sing N N 216 LYS CB HB3 sing N N 217 LYS CG CD sing N N 218 LYS CG HG2 sing N N 219 LYS CG HG3 sing N N 220 LYS CD CE sing N N 221 LYS CD HD2 sing N N 222 LYS CD HD3 sing N N 223 LYS CE NZ sing N N 224 LYS CE HE2 sing N N 225 LYS CE HE3 sing N N 226 LYS NZ HZ1 sing N N 227 LYS NZ HZ2 sing N N 228 LYS NZ HZ3 sing N N 229 LYS OXT HXT sing N N 230 MET N CA sing N N 231 MET N H sing N N 232 MET N H2 sing N N 233 MET CA C sing N N 234 MET CA CB sing N N 235 MET CA HA sing N N 236 MET C O doub N N 237 MET C OXT sing N N 238 MET CB CG sing N N 239 MET CB HB2 sing N N 240 MET CB HB3 sing N N 241 MET CG SD sing N N 242 MET CG HG2 sing N N 243 MET CG HG3 sing N N 244 MET SD CE sing N N 245 MET CE HE1 sing N N 246 MET CE HE2 sing N N 247 MET CE HE3 sing N N 248 MET OXT HXT sing N N 249 MSE N CA sing N N 250 MSE N H sing N N 251 MSE N H2 sing N N 252 MSE CA C sing N N 253 MSE CA CB sing N N 254 MSE CA HA sing N N 255 MSE C O doub N N 256 MSE C OXT sing N N 257 MSE OXT HXT sing N N 258 MSE CB CG sing N N 259 MSE CB HB2 sing N N 260 MSE CB HB3 sing N N 261 MSE CG SE sing N N 262 MSE CG HG2 sing N N 263 MSE CG HG3 sing N N 264 MSE SE CE sing N N 265 MSE CE HE1 sing N N 266 MSE CE HE2 sing N N 267 MSE CE HE3 sing N N 268 PHE N CA sing N N 269 PHE N H sing N N 270 PHE N H2 sing N N 271 PHE CA C sing N N 272 PHE CA CB sing N N 273 PHE CA HA sing N N 274 PHE C O doub N N 275 PHE C OXT sing N N 276 PHE CB CG sing N N 277 PHE CB HB2 sing N N 278 PHE CB HB3 sing N N 279 PHE CG CD1 doub Y N 280 PHE CG CD2 sing Y N 281 PHE CD1 CE1 sing Y N 282 PHE CD1 HD1 sing N N 283 PHE CD2 CE2 doub Y N 284 PHE CD2 HD2 sing N N 285 PHE CE1 CZ doub Y N 286 PHE CE1 HE1 sing N N 287 PHE CE2 CZ sing Y N 288 PHE CE2 HE2 sing N N 289 PHE CZ HZ sing N N 290 PHE OXT HXT sing N N 291 PRO N CA sing N N 292 PRO N CD sing N N 293 PRO N H sing N N 294 PRO CA C sing N N 295 PRO CA CB sing N N 296 PRO CA HA sing N N 297 PRO C O doub N N 298 PRO C OXT sing N N 299 PRO CB CG sing N N 300 PRO CB HB2 sing N N 301 PRO CB HB3 sing N N 302 PRO CG CD sing N N 303 PRO CG HG2 sing N N 304 PRO CG HG3 sing N N 305 PRO CD HD2 sing N N 306 PRO CD HD3 sing N N 307 PRO OXT HXT sing N N 308 SCN S C sing N N 309 SCN C N trip N N 310 SER N CA sing N N 311 SER N H sing N N 312 SER N H2 sing N N 313 SER CA C sing N N 314 SER CA CB sing N N 315 SER CA HA sing N N 316 SER C O doub N N 317 SER C OXT sing N N 318 SER CB OG sing N N 319 SER CB HB2 sing N N 320 SER CB HB3 sing N N 321 SER OG HG sing N N 322 SER OXT HXT sing N N 323 THR N CA sing N N 324 THR N H sing N N 325 THR N H2 sing N N 326 THR CA C sing N N 327 THR CA CB sing N N 328 THR CA HA sing N N 329 THR C O doub N N 330 THR C OXT sing N N 331 THR CB OG1 sing N N 332 THR CB CG2 sing N N 333 THR CB HB sing N N 334 THR OG1 HG1 sing N N 335 THR CG2 HG21 sing N N 336 THR CG2 HG22 sing N N 337 THR CG2 HG23 sing N N 338 THR OXT HXT sing N N 339 TRP N CA sing N N 340 TRP N H sing N N 341 TRP N H2 sing N N 342 TRP CA C sing N N 343 TRP CA CB sing N N 344 TRP CA HA sing N N 345 TRP C O doub N N 346 TRP C OXT sing N N 347 TRP CB CG sing N N 348 TRP CB HB2 sing N N 349 TRP CB HB3 sing N N 350 TRP CG CD1 doub Y N 351 TRP CG CD2 sing Y N 352 TRP CD1 NE1 sing Y N 353 TRP CD1 HD1 sing N N 354 TRP CD2 CE2 doub Y N 355 TRP CD2 CE3 sing Y N 356 TRP NE1 CE2 sing Y N 357 TRP NE1 HE1 sing N N 358 TRP CE2 CZ2 sing Y N 359 TRP CE3 CZ3 doub Y N 360 TRP CE3 HE3 sing N N 361 TRP CZ2 CH2 doub Y N 362 TRP CZ2 HZ2 sing N N 363 TRP CZ3 CH2 sing Y N 364 TRP CZ3 HZ3 sing N N 365 TRP CH2 HH2 sing N N 366 TRP OXT HXT sing N N 367 TYR N CA sing N N 368 TYR N H sing N N 369 TYR N H2 sing N N 370 TYR CA C sing N N 371 TYR CA CB sing N N 372 TYR CA HA sing N N 373 TYR C O doub N N 374 TYR C OXT sing N N 375 TYR CB CG sing N N 376 TYR CB HB2 sing N N 377 TYR CB HB3 sing N N 378 TYR CG CD1 doub Y N 379 TYR CG CD2 sing Y N 380 TYR CD1 CE1 sing Y N 381 TYR CD1 HD1 sing N N 382 TYR CD2 CE2 doub Y N 383 TYR CD2 HD2 sing N N 384 TYR CE1 CZ doub Y N 385 TYR CE1 HE1 sing N N 386 TYR CE2 CZ sing Y N 387 TYR CE2 HE2 sing N N 388 TYR CZ OH sing N N 389 TYR OH HH sing N N 390 TYR OXT HXT sing N N 391 VAL N CA sing N N 392 VAL N H sing N N 393 VAL N H2 sing N N 394 VAL CA C sing N N 395 VAL CA CB sing N N 396 VAL CA HA sing N N 397 VAL C O doub N N 398 VAL C OXT sing N N 399 VAL CB CG1 sing N N 400 VAL CB CG2 sing N N 401 VAL CB HB sing N N 402 VAL CG1 HG11 sing N N 403 VAL CG1 HG12 sing N N 404 VAL CG1 HG13 sing N N 405 VAL CG2 HG21 sing N N 406 VAL CG2 HG22 sing N N 407 VAL CG2 HG23 sing N N 408 VAL OXT HXT sing N N 409 # _atom_sites.entry_id 2OGB _atom_sites.fract_transf_matrix[1][1] 0.006352 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.001296 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017174 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.027298 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S SE # loop_