HEADER IMMUNE SYSTEM 10-JAN-07 2OI9 TITLE STRUCTURE OF THE 2C/LD/QL9 ALLOGENEIC COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: MAJOR HISTOCOMPATIBILITY COMPLEX PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: ALPHA 1,2 DOMAINS; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: T CELL RECEPTOR ALPHA CHAIN; COMPND 9 CHAIN: B; COMPND 10 SYNONYM: V ALPHA; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: T CELL RECEPTOR BETA CHAIN; COMPND 14 CHAIN: C; COMPND 15 SYNONYM: V BETA; COMPND 16 ENGINEERED: YES; COMPND 17 MOL_ID: 4; COMPND 18 MOLECULE: PEPTIDE (GLN)(LEU)(SER)(PRO)(PHE)(PRO)(PHE)(ASP)(LEU); COMPND 19 CHAIN: Q; COMPND 20 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PET28A; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 11 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 12 ORGANISM_TAXID: 10090; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 15 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 16 EXPRESSION_SYSTEM_VECTOR_TYPE: PET22B; SOURCE 17 MOL_ID: 3; SOURCE 18 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 19 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 20 ORGANISM_TAXID: 10090; SOURCE 21 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 22 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 23 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 24 EXPRESSION_SYSTEM_VECTOR_TYPE: PET22B; SOURCE 25 MOL_ID: 4; SOURCE 26 SYNTHETIC: YES; SOURCE 27 OTHER_DETAILS: SYNTHESIZED PEPTIDE KEYWDS TCR, MHC, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR K.C.GARCIA,L.A.COLF REVDAT 3 25-OCT-23 2OI9 1 REMARK REVDAT 2 24-FEB-09 2OI9 1 VERSN REVDAT 1 24-APR-07 2OI9 0 JRNL AUTH L.A.COLF,A.J.BANKOVICH,N.A.HANICK,N.A.BOWERMAN,L.L.JONES, JRNL AUTH 2 D.M.KRANZ,K.C.GARCIA JRNL TITL HOW A SINGLE T CELL RECEPTOR RECOGNIZES BOTH SELF AND JRNL TITL 2 FOREIGN MHC. JRNL REF CELL(CAMBRIDGE,MASS.) V. 129 135 2007 JRNL REFN ISSN 0092-8674 JRNL PMID 17418792 JRNL DOI 10.1016/J.CELL.2007.01.048 REMARK 2 REMARK 2 RESOLUTION. 2.35 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.35 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 60.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 29820 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.221 REMARK 3 R VALUE (WORKING SET) : 0.220 REMARK 3 FREE R VALUE : 0.226 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1580 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.35 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.41 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2165 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.96 REMARK 3 BIN R VALUE (WORKING SET) : 0.3130 REMARK 3 BIN FREE R VALUE SET COUNT : 108 REMARK 3 BIN FREE R VALUE : 0.3390 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3225 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 176 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 44.75 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.68000 REMARK 3 B22 (A**2) : 0.68000 REMARK 3 B33 (A**2) : -1.01000 REMARK 3 B12 (A**2) : 0.34000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.243 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.183 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.124 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.221 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.938 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.936 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3320 ; 0.009 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4499 ; 1.062 ; 1.937 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 400 ; 4.336 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 170 ;38.600 ;23.118 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 509 ;15.875 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 27 ;13.649 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 459 ; 0.073 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2614 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1487 ; 0.242 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2232 ; 0.306 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 190 ; 0.156 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 31 ; 0.181 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 10 ; 0.186 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2046 ; 1.128 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3200 ; 1.563 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1482 ; 2.271 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1299 ; 3.403 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 FUSION PROTEIN COMPRISES CHAIN B (T CELL RECEPTOR ALPHA CHAIN), REMARK 3 THE LINKER (GGGGSGGGGSGGGGSGGGGS), CHAIN C(T CELL RECEPTOR BETA REMARK 3 CHAIN) AND C-TERMINAL TAIL WITH SEQUENCE HHHHHH. THERE IS NOT LINK REMARK 3 RECORD FOR CHAIN B AND LINKER, NOR LINK FOR LINKER AND CHAIN C REMARK 3 BECAUSE THE LINKER WAS NOT VISIBLE. REMARK 3 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. REMARK 4 REMARK 4 2OI9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 17-JAN-07. REMARK 100 THE DEPOSITION ID IS D_1000041168. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-APR-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL11-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97908 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29820 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.350 REMARK 200 RESOLUTION RANGE LOW (A) : 141.420 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 5.000 REMARK 200 R MERGE (I) : 0.07800 REMARK 200 R SYM (I) : 0.07800 REMARK 200 FOR THE DATA SET : 17.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.35 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.43 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.70 REMARK 200 R MERGE FOR SHELL (I) : 0.48800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1LDP, 2CKB REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 67.81 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.82 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.9M SODIUM DIHYDROGEN PHOSPHATE, REMARK 280 0.01M DI-POTASSIUM HYDROGEN PHOSPHATE, PH 7.2, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 63.35200 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 31.67600 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 47.51400 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 15.83800 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 79.19000 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 63.35200 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 31.67600 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 15.83800 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 47.51400 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 79.19000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5280 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17660 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -30.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, Q REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 207 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASN A 176 REMARK 465 ALA A 177 REMARK 465 THR A 178 REMARK 465 LEU A 179 REMARK 465 PRO B 116 REMARK 465 TYR B 117 REMARK 465 ASN B 118 REMARK 465 SER C 119 REMARK 465 ALA C 120 REMARK 465 LEU C 121 REMARK 465 GLU C 122 REMARK 465 HIS C 123 REMARK 465 HIS C 124 REMARK 465 HIS C 125 REMARK 465 HIS C 126 REMARK 465 HIS C 127 REMARK 465 HIS C 128 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 SER B 93 C GLY B 99 N 0.222 REMARK 500 GLY C 98 C THR C 105 N 0.187 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 29 -127.06 46.05 REMARK 500 LEU A 110 -63.75 -108.17 REMARK 500 TYR A 123 -74.13 -125.20 REMARK 500 ALA B 86 -174.08 -175.52 REMARK 500 ALA B 101 18.40 54.26 REMARK 500 HIS C 41 -136.23 -111.85 REMARK 500 SER C 88 -172.45 -179.72 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2E7L RELATED DB: PDB DBREF 2OI9 A 1 179 UNP P01897 HA1L_MOUSE 25 203 DBREF 2OI9 B 1 115 UNP P01738 TVA1_MOUSE 21 130 DBREF 2OI9 C 1 117 UNP A2NTY6 A2NTY6_MOUSE 30 144 DBREF 2OI9 Q 1 9 PDB 2OI9 2OI9 1 9 SEQRES 1 A 179 GLY PRO HIS SER MET ARG TYR TYR GLU THR ALA THR SER SEQRES 2 A 179 ARG ARG GLY LEU GLY GLU PRO ARG TYR THR SER VAL GLY SEQRES 3 A 179 TYR VAL ASP ASP LYS GLU PHE VAL ARG PHE ASP SER ASP SEQRES 4 A 179 ALA GLU ASN PRO ARG TYR GLU PRO GLN VAL PRO TRP MET SEQRES 5 A 179 GLU GLN GLU GLY PRO GLU TYR TRP GLU ARG ILE THR GLN SEQRES 6 A 179 VAL ALA LYS GLY GLN GLU GLN TRP PHE ARG VAL ASN LEU SEQRES 7 A 179 ARG THR LEU LEU GLY TYR TYR ASN GLN SER ALA GLY GLY SEQRES 8 A 179 THR HIS THR LEU GLN ARG MET TYR GLY CYS ASP VAL GLY SEQRES 9 A 179 SER ASP GLY ARG LEU LEU ARG GLY TYR GLU GLN PHE ALA SEQRES 10 A 179 TYR ASP GLY CYS ASP TYR ILE ALA LEU ASN GLU ASP LEU SEQRES 11 A 179 ARG THR TRP THR ALA ALA ASP MET ALA ALA GLN ILE THR SEQRES 12 A 179 ARG ARG LYS TRP GLU GLN ALA GLY ALA ALA GLU TYR TYR SEQRES 13 A 179 ARG ALA TYR LEU GLU GLY GLU CYS VAL GLU TRP LEU HIS SEQRES 14 A 179 ARG TYR LEU LYS ASN GLY ASN ALA THR LEU SEQRES 1 B 113 GLN SER VAL THR GLN PRO ASP ALA ARG VAL THR VAL SER SEQRES 2 B 113 GLU GLY ALA SER LEU GLN LEU ARG CYS LYS TYR SER TYR SEQRES 3 B 113 SER ALA THR PRO TYR LEU PHE TRP TYR VAL GLN TYR PRO SEQRES 4 B 113 ARG GLN GLY PRO GLN LEU LEU LEU LYS TYR TYR SER GLY SEQRES 5 B 113 ASP PRO VAL VAL GLN GLY VAL ASN GLY PHE GLU ALA GLU SEQRES 6 B 113 PHE SER LYS SER ASN SER SER PHE HIS LEU ARG LYS ALA SEQRES 7 B 113 SER VAL HIS ARG SER ASP SER ALA VAL TYR PHE CYS ALA SEQRES 8 B 113 VAL SER GLY PHE ALA SER ALA LEU THR PHE GLY SER GLY SEQRES 9 B 113 THR LYS VAL ILE VAL LEU PRO TYR ASN SEQRES 1 C 121 GLU ALA ALA VAL THR GLN SER PRO ARG ASN LYS VAL ALA SEQRES 2 C 121 VAL THR GLY GLU LYS VAL THR LEU SER CYS ASN GLN THR SEQRES 3 C 121 ASN ASN HIS ASN ASN MET TYR TRP TYR ARG GLN ASP THR SEQRES 4 C 121 GLY HIS GLU LEU ARG LEU ILE TYR TYR SER TYR GLY ALA SEQRES 5 C 121 GLY SER THR GLU LYS GLY ASP ILE PRO ASP GLY TYR LYS SEQRES 6 C 121 ALA SER ARG PRO SER GLN GLU ASN PHE SER LEU THR LEU SEQRES 7 C 121 GLU SER ALA THR PRO SER GLN THR SER VAL TYR PHE CYS SEQRES 8 C 121 ALA SER GLY GLY GLY GLY THR LEU TYR PHE GLY ALA GLY SEQRES 9 C 121 THR ARG LEU SER VAL LEU SER SER ALA LEU GLU HIS HIS SEQRES 10 C 121 HIS HIS HIS HIS SEQRES 1 Q 9 GLN LEU SER PRO PHE PRO PHE ASP LEU FORMUL 5 HOH *176(H2 O) HELIX 1 1 VAL A 49 GLU A 53 5 5 HELIX 2 2 GLY A 56 ASN A 86 1 31 HELIX 3 3 ASP A 137 GLY A 151 1 15 HELIX 4 4 GLY A 151 GLY A 162 1 12 HELIX 5 5 GLY A 162 GLY A 175 1 14 HELIX 6 6 HIS B 81 SER B 85 5 5 HELIX 7 7 PHE B 100 SER B 102 5 3 HELIX 8 8 THR C 83 THR C 87 5 5 SHEET 1 A 8 TYR A 45 PRO A 47 0 SHEET 2 A 8 LYS A 31 ASP A 37 -1 N ARG A 35 O GLU A 46 SHEET 3 A 8 ARG A 21 VAL A 28 -1 N SER A 24 O PHE A 36 SHEET 4 A 8 HIS A 3 SER A 13 -1 N THR A 12 O ARG A 21 SHEET 5 A 8 HIS A 93 VAL A 103 -1 O ARG A 97 N GLU A 9 SHEET 6 A 8 LEU A 109 TYR A 118 -1 O LEU A 110 N ASP A 102 SHEET 7 A 8 CYS A 121 LEU A 126 -1 O ILE A 124 N PHE A 116 SHEET 8 A 8 TRP A 133 ALA A 135 -1 O THR A 134 N ALA A 125 SHEET 1 B 2 SER B 2 THR B 4 0 SHEET 2 B 2 LYS B 23 SER B 25 -1 O LYS B 23 N THR B 4 SHEET 1 C 5 ARG B 9 SER B 13 0 SHEET 2 C 5 THR B 110 LEU B 115 1 O LYS B 111 N VAL B 10 SHEET 3 C 5 ALA B 86 SER B 93 -1 N ALA B 86 O VAL B 112 SHEET 4 C 5 LEU B 32 GLN B 37 -1 N TYR B 35 O PHE B 89 SHEET 5 C 5 GLN B 44 TYR B 49 -1 O GLN B 44 N VAL B 36 SHEET 1 D 4 ARG B 9 SER B 13 0 SHEET 2 D 4 THR B 110 LEU B 115 1 O LYS B 111 N VAL B 10 SHEET 3 D 4 ALA B 86 SER B 93 -1 N ALA B 86 O VAL B 112 SHEET 4 D 4 LEU B 104 PHE B 106 -1 O THR B 105 N VAL B 92 SHEET 1 E 4 LEU B 18 LEU B 20 0 SHEET 2 E 4 SER B 72 LYS B 77 -1 O LYS B 77 N LEU B 18 SHEET 3 E 4 PHE B 62 SER B 67 -1 N GLU B 63 O ARG B 76 SHEET 4 E 4 VAL B 55 GLN B 57 -1 N VAL B 56 O ALA B 64 SHEET 1 F 4 VAL C 4 SER C 7 0 SHEET 2 F 4 VAL C 19 GLN C 25 -1 O SER C 22 N SER C 7 SHEET 3 F 4 ASN C 74 LEU C 79 -1 O LEU C 77 N LEU C 21 SHEET 4 F 4 TYR C 65 SER C 68 -1 N LYS C 66 O THR C 78 SHEET 1 G 6 ASN C 10 VAL C 14 0 SHEET 2 G 6 THR C 112 LEU C 117 1 O SER C 115 N ALA C 13 SHEET 3 G 6 SER C 88 GLY C 95 -1 N TYR C 90 O THR C 112 SHEET 4 G 6 ASN C 31 GLN C 37 -1 N TYR C 35 O PHE C 91 SHEET 5 G 6 ARG C 44 SER C 49 -1 O ILE C 46 N TRP C 34 SHEET 6 G 6 GLU C 56 LYS C 57 -1 O GLU C 56 N TYR C 48 SHEET 1 H 4 ASN C 10 VAL C 14 0 SHEET 2 H 4 THR C 112 LEU C 117 1 O SER C 115 N ALA C 13 SHEET 3 H 4 SER C 88 GLY C 95 -1 N TYR C 90 O THR C 112 SHEET 4 H 4 LEU C 106 PHE C 108 -1 O TYR C 107 N SER C 94 SSBOND 1 CYS A 101 CYS A 164 1555 1555 2.10 SSBOND 2 CYS B 22 CYS B 90 1555 1555 2.04 SSBOND 3 CYS C 23 CYS C 92 1555 1555 2.04 CISPEP 1 SER C 7 PRO C 8 0 -2.71 CRYST1 163.171 163.171 95.028 90.00 90.00 120.00 P 65 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006129 0.003538 0.000000 0.00000 SCALE2 0.000000 0.007077 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010523 0.00000