data_2OIL # _entry.id 2OIL # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.377 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2OIL pdb_00002oil 10.2210/pdb2oil/pdb RCSB RCSB041180 ? ? WWPDB D_1000041180 ? ? # _pdbx_database_status.entry_id 2OIL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2007-01-11 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Zhu, H.' 1 'Wang, J.' 2 'Shen, Y.' 3 'Tempel, W.' 4 'Landry, R.' 5 'Arrowsmith, C.H.' 6 'Edwards, A.M.' 7 'Sundstrom, M.' 8 'Weigelt, J.' 9 'Bochkarev, A.' 10 'Park, H.' 11 'Structural Genomics Consortium (SGC)' 12 # _citation.id primary _citation.title 'Crystal structure of human RAB25 in complex with GDP' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Zhu, H.' 1 ? primary 'Wang, J.' 2 ? primary 'Shen, Y.' 3 ? primary 'Tempel, W.' 4 ? primary 'Landry, R.' 5 ? primary 'Arrowsmith, C.H.' 6 ? primary 'Edwards, A.M.' 7 ? primary 'Sundstrom, M.' 8 ? primary 'Weigelt, J.' 9 ? primary 'Bochkarev, A.' 10 ? primary 'Park, H.' 11 ? # _cell.length_a 90.250 _cell.length_b 90.250 _cell.length_c 45.598 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.entry_id 2OIL _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.Int_Tables_number 96 _symmetry.entry_id 2OIL _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Ras-related protein Rab-25' 21551.324 1 ? ? ? ? 2 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 3 non-polymer syn "GUANOSINE-5'-DIPHOSPHATE" 443.201 1 ? ? ? ? 4 non-polymer syn 'UNKNOWN ATOM OR ION' ? 1 ? ? ? ? 5 water nat water 18.015 18 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name CATX-8 # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MGSSHHHHHHSSGLVPRGSEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWD TAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEARMFAENN GLLFLETSALDSTNVELAFETVLKEIFAKVSKQ ; _entity_poly.pdbx_seq_one_letter_code_can ;MGSSHHHHHHSSGLVPRGSEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWD TAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEARMFAENN GLLFLETSALDSTNVELAFETVLKEIFAKVSKQ ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 SER n 1 4 SER n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 SER n 1 12 SER n 1 13 GLY n 1 14 LEU n 1 15 VAL n 1 16 PRO n 1 17 ARG n 1 18 GLY n 1 19 SER n 1 20 GLU n 1 21 ASP n 1 22 TYR n 1 23 ASN n 1 24 PHE n 1 25 VAL n 1 26 PHE n 1 27 LYS n 1 28 VAL n 1 29 VAL n 1 30 LEU n 1 31 ILE n 1 32 GLY n 1 33 GLU n 1 34 SER n 1 35 GLY n 1 36 VAL n 1 37 GLY n 1 38 LYS n 1 39 THR n 1 40 ASN n 1 41 LEU n 1 42 LEU n 1 43 SER n 1 44 ARG n 1 45 PHE n 1 46 THR n 1 47 ARG n 1 48 ASN n 1 49 GLU n 1 50 PHE n 1 51 SER n 1 52 HIS n 1 53 ASP n 1 54 SER n 1 55 ARG n 1 56 THR n 1 57 THR n 1 58 ILE n 1 59 GLY n 1 60 VAL n 1 61 GLU n 1 62 PHE n 1 63 SER n 1 64 THR n 1 65 ARG n 1 66 THR n 1 67 VAL n 1 68 MET n 1 69 LEU n 1 70 GLY n 1 71 THR n 1 72 ALA n 1 73 ALA n 1 74 VAL n 1 75 LYS n 1 76 ALA n 1 77 GLN n 1 78 ILE n 1 79 TRP n 1 80 ASP n 1 81 THR n 1 82 ALA n 1 83 GLY n 1 84 LEU n 1 85 GLU n 1 86 ARG n 1 87 TYR n 1 88 ARG n 1 89 ALA n 1 90 ILE n 1 91 THR n 1 92 SER n 1 93 ALA n 1 94 TYR n 1 95 TYR n 1 96 ARG n 1 97 GLY n 1 98 ALA n 1 99 VAL n 1 100 GLY n 1 101 ALA n 1 102 LEU n 1 103 LEU n 1 104 VAL n 1 105 PHE n 1 106 ASP n 1 107 LEU n 1 108 THR n 1 109 LYS n 1 110 HIS n 1 111 GLN n 1 112 THR n 1 113 TYR n 1 114 ALA n 1 115 VAL n 1 116 VAL n 1 117 GLU n 1 118 ARG n 1 119 TRP n 1 120 LEU n 1 121 LYS n 1 122 GLU n 1 123 LEU n 1 124 TYR n 1 125 ASP n 1 126 HIS n 1 127 ALA n 1 128 GLU n 1 129 ALA n 1 130 THR n 1 131 ILE n 1 132 VAL n 1 133 VAL n 1 134 MET n 1 135 LEU n 1 136 VAL n 1 137 GLY n 1 138 ASN n 1 139 LYS n 1 140 SER n 1 141 ASP n 1 142 LEU n 1 143 SER n 1 144 GLN n 1 145 ALA n 1 146 ARG n 1 147 GLU n 1 148 VAL n 1 149 PRO n 1 150 THR n 1 151 GLU n 1 152 GLU n 1 153 ALA n 1 154 ARG n 1 155 MET n 1 156 PHE n 1 157 ALA n 1 158 GLU n 1 159 ASN n 1 160 ASN n 1 161 GLY n 1 162 LEU n 1 163 LEU n 1 164 PHE n 1 165 LEU n 1 166 GLU n 1 167 THR n 1 168 SER n 1 169 ALA n 1 170 LEU n 1 171 ASP n 1 172 SER n 1 173 THR n 1 174 ASN n 1 175 VAL n 1 176 GLU n 1 177 LEU n 1 178 ALA n 1 179 PHE n 1 180 GLU n 1 181 THR n 1 182 VAL n 1 183 LEU n 1 184 LYS n 1 185 GLU n 1 186 ILE n 1 187 PHE n 1 188 ALA n 1 189 LYS n 1 190 VAL n 1 191 SER n 1 192 LYS n 1 193 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene 'RAB25, CATX8' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21-CodonPlus (DE-3)-RIL' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name p28a-thrombin-LIC _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RAB25_HUMAN _struct_ref.pdbx_db_accession P57735 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;EDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAYYRGAV GALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAF ETVLKEIFAKVSKQ ; _struct_ref.pdbx_align_begin 7 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2OIL _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 20 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 193 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P57735 _struct_ref_seq.db_align_beg 7 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 180 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 7 _struct_ref_seq.pdbx_auth_seq_align_end 180 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2OIL MET A 1 ? UNP P57735 ? ? 'cloning artifact' -12 1 1 2OIL GLY A 2 ? UNP P57735 ? ? 'cloning artifact' -11 2 1 2OIL SER A 3 ? UNP P57735 ? ? 'cloning artifact' -10 3 1 2OIL SER A 4 ? UNP P57735 ? ? 'cloning artifact' -9 4 1 2OIL HIS A 5 ? UNP P57735 ? ? 'expression tag' -8 5 1 2OIL HIS A 6 ? UNP P57735 ? ? 'expression tag' -7 6 1 2OIL HIS A 7 ? UNP P57735 ? ? 'expression tag' -6 7 1 2OIL HIS A 8 ? UNP P57735 ? ? 'expression tag' -5 8 1 2OIL HIS A 9 ? UNP P57735 ? ? 'expression tag' -4 9 1 2OIL HIS A 10 ? UNP P57735 ? ? 'expression tag' -3 10 1 2OIL SER A 11 ? UNP P57735 ? ? 'cloning artifact' -2 11 1 2OIL SER A 12 ? UNP P57735 ? ? 'cloning artifact' -1 12 1 2OIL GLY A 13 ? UNP P57735 ? ? 'cloning artifact' 0 13 1 2OIL LEU A 14 ? UNP P57735 ? ? 'cloning artifact' 1 14 1 2OIL VAL A 15 ? UNP P57735 ? ? 'cloning artifact' 2 15 1 2OIL PRO A 16 ? UNP P57735 ? ? 'cloning artifact' 3 16 1 2OIL ARG A 17 ? UNP P57735 ? ? 'cloning artifact' 4 17 1 2OIL GLY A 18 ? UNP P57735 ? ? 'cloning artifact' 5 18 1 2OIL SER A 19 ? UNP P57735 ? ? 'cloning artifact' 6 19 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GDP 'RNA linking' n "GUANOSINE-5'-DIPHOSPHATE" ? 'C10 H15 N5 O11 P2' 443.201 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 UNX non-polymer . 'UNKNOWN ATOM OR ION' ? ? ? VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 2OIL # _exptl_crystal.id 1 _exptl_crystal.density_percent_sol 42.90 _exptl_crystal.density_Matthews 2.15 _exptl_crystal.density_meas ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH ? _exptl_crystal_grow.temp 291 _exptl_crystal_grow.pdbx_details '20% peg-3350, 0.2M ammonium chloride, vapor diffusion, sitting drop, temperature 291K, VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS' _diffrn_detector.pdbx_collection_date 2006-10-03 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type ? _diffrn_source.pdbx_wavelength_list ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? # _reflns.entry_id 2OIL _reflns.d_resolution_high 2.300 _reflns.d_resolution_low 30.000 _reflns.number_obs 8824 _reflns.pdbx_Rmerge_I_obs 0.146 _reflns.pdbx_netI_over_sigmaI 6.900 _reflns.pdbx_chi_squared 1.954 _reflns.pdbx_redundancy 12.800 _reflns.percent_possible_obs 100.000 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal 2.30 2.38 ? ? 860 0.754 ? ? 0.961 13.00 100.00 ? ? ? 1 2.38 2.48 ? ? 844 0.629 ? ? 0.990 13.00 100.00 ? ? ? 2 2.48 2.59 ? ? 869 0.54 ? ? 1.114 13.10 100.00 ? ? ? 3 2.59 2.73 ? ? 858 0.414 ? ? 1.222 13.10 100.00 ? ? ? 4 2.73 2.90 ? ? 866 0.313 ? ? 1.391 13.20 100.00 ? ? ? 5 2.90 3.12 ? ? 871 0.236 ? ? 1.677 13.10 100.00 ? ? ? 6 3.12 3.43 ? ? 877 0.17 ? ? 2.251 13.00 100.00 ? ? ? 7 3.43 3.93 ? ? 893 0.125 ? ? 2.909 12.70 100.00 ? ? ? 8 3.93 4.95 ? ? 906 0.094 ? ? 3.425 12.30 100.00 ? ? ? 9 4.95 30.00 ? ? 980 0.079 ? ? 3.588 11.70 99.90 ? ? ? 10 # _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.B_iso_mean 36.904 _refine.aniso_B[1][1] -0.426 _refine.aniso_B[2][2] -0.426 _refine.aniso_B[3][3] 0.851 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.solvent_model_details 'MASK BULK SOLVENT' _refine.pdbx_solvent_vdw_probe_radii 1.400 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.ls_d_res_high 2.300 _refine.ls_d_res_low 28.537 _refine.ls_number_reflns_R_free 418 _refine.ls_number_reflns_obs 8778 _refine.ls_R_factor_R_work 0.2082 _refine.ls_R_factor_R_free 0.2575 _refine.ls_R_factor_all 0.21 _refine.ls_wR_factor_R_work 0.189 _refine.ls_wR_factor_R_free 0.228 _refine.ls_percent_reflns_obs 99.943 _refine.ls_percent_reflns_R_free 4.762 _refine.correlation_coeff_Fo_to_Fc 0.939 _refine.correlation_coeff_Fo_to_Fc_free 0.929 _refine.pdbx_overall_ESU_R 0.341 _refine.pdbx_overall_ESU_R_Free 0.245 _refine.overall_SU_ML 0.170 _refine.overall_SU_B 6.853 _refine.entry_id 2OIL _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_obs ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'pdb entry 1OIX' _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1336 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 30 _refine_hist.number_atoms_solvent 18 _refine_hist.number_atoms_total 1384 _refine_hist.d_res_high 2.300 _refine_hist.d_res_low 28.537 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 1389 0.017 0.022 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1892 1.474 1.970 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 173 6.504 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 57 34.243 23.860 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 223 13.333 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 7 18.108 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 225 0.094 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1019 0.005 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 557 0.208 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 950 0.298 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 68 0.128 0.200 ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined 2 0.038 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 28 0.176 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 4 0.144 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 889 2.756 2.000 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1382 4.087 3.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 587 2.877 2.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 510 3.971 3.000 ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_low _refine_ls_shell.d_res_high _refine_ls_shell.number_reflns_all _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free _refine_ls_shell.number_reflns_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id 20 2.360 2.300 620 99.839 584 0.233 0.239 35 0.348 . . . . 'X-RAY DIFFRACTION' 20 2.424 2.360 615 100.000 584 0.216 0.221 31 0.314 . . . . 'X-RAY DIFFRACTION' 20 2.494 2.424 595 99.832 554 0.21 0.216 40 0.288 . . . . 'X-RAY DIFFRACTION' 20 2.570 2.494 582 100.000 549 0.212 0.218 33 0.325 . . . . 'X-RAY DIFFRACTION' 20 2.654 2.570 574 100.000 547 0.232 0.237 27 0.338 . . . . 'X-RAY DIFFRACTION' 20 2.746 2.654 541 100.000 516 0.207 0.210 25 0.263 . . . . 'X-RAY DIFFRACTION' 20 2.848 2.746 529 100.000 507 0.224 0.227 22 0.284 . . . . 'X-RAY DIFFRACTION' 20 2.964 2.848 510 100.000 489 0.212 0.215 21 0.267 . . . . 'X-RAY DIFFRACTION' 20 3.094 2.964 494 100.000 470 0.187 0.191 24 0.274 . . . . 'X-RAY DIFFRACTION' 20 3.243 3.094 477 99.790 458 0.223 0.225 18 0.27 . . . . 'X-RAY DIFFRACTION' 20 3.416 3.243 441 100.000 427 0.197 0.201 14 0.306 . . . . 'X-RAY DIFFRACTION' 20 3.620 3.416 437 100.000 415 0.186 0.189 22 0.254 . . . . 'X-RAY DIFFRACTION' 20 3.865 3.620 407 99.754 391 0.186 0.191 15 0.34 . . . . 'X-RAY DIFFRACTION' 20 4.169 3.865 382 100.000 372 0.191 0.190 10 0.182 . . . . 'X-RAY DIFFRACTION' 20 4.557 4.169 359 100.000 344 0.174 0.177 15 0.273 . . . . 'X-RAY DIFFRACTION' 20 5.078 4.557 328 100.000 310 0.178 0.179 18 0.198 . . . . 'X-RAY DIFFRACTION' 20 5.833 5.078 292 99.658 277 0.223 0.224 14 0.249 . . . . 'X-RAY DIFFRACTION' 20 7.071 5.833 250 100.000 236 0.245 0.246 14 0.257 . . . . 'X-RAY DIFFRACTION' 20 9.706 7.071 209 100.000 196 0.233 0.229 13 0.169 . . . . 'X-RAY DIFFRACTION' 20 28.537 9.706 141 100.000 134 0.287 0.282 7 0.176 . . . . 'X-RAY DIFFRACTION' # _struct.entry_id 2OIL _struct.title 'Crystal structure of human RAB25 in complex with GDP' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text 'G-PROTEIN, RAB, GDP, STRUCTURAL GENOMICS, STRUCTURAL GENOMICS CONSORTIUM, SGC, PROTEIN TRANSPORT' _struct_keywords.entry_id 2OIL _struct_keywords.pdbx_keywords 'PROTEIN TRANSPORT' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? # _struct_biol.id 1 _struct_biol.details 'not known' _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 37 ? ASN A 48 ? GLY A 24 ASN A 35 1 ? 12 HELX_P HELX_P2 2 ILE A 90 ? ARG A 96 ? ILE A 77 ARG A 83 1 ? 7 HELX_P HELX_P3 3 LYS A 109 ? VAL A 115 ? LYS A 96 VAL A 102 1 ? 7 HELX_P HELX_P4 4 VAL A 115 ? ASP A 125 ? VAL A 102 ASP A 112 1 ? 11 HELX_P HELX_P5 5 SER A 140 ? ARG A 146 ? SER A 127 ARG A 133 5 ? 7 HELX_P HELX_P6 6 PRO A 149 ? ASN A 160 ? PRO A 136 ASN A 147 1 ? 12 HELX_P HELX_P7 7 ASN A 174 ? LYS A 192 ? ASN A 161 LYS A 179 1 ? 19 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A THR 39 OG1 ? ? ? 1_555 B MG . MG ? ? A THR 26 A MG 301 1_555 ? ? ? ? ? ? ? 2.045 ? ? metalc2 metalc ? ? C GDP . O3B ? ? ? 1_555 B MG . MG ? ? A GDP 201 A MG 301 1_555 ? ? ? ? ? ? ? 1.960 ? ? metalc3 metalc ? ? B MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 301 A HOH 401 1_555 ? ? ? ? ? ? ? 2.014 ? ? metalc4 metalc ? ? B MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 301 A HOH 405 1_555 ? ? ? ? ? ? ? 2.217 ? ? metalc5 metalc ? ? B MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 301 A HOH 406 1_555 ? ? ? ? ? ? ? 1.946 ? ? metalc6 metalc ? ? B MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 301 A HOH 410 1_555 ? ? ? ? ? ? ? 2.328 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 6 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 60 ? LEU A 69 ? VAL A 47 LEU A 56 A 2 ALA A 72 ? THR A 81 ? ALA A 59 THR A 68 A 3 PHE A 24 ? ILE A 31 ? PHE A 11 ILE A 18 A 4 GLY A 100 ? ASP A 106 ? GLY A 87 ASP A 93 A 5 VAL A 132 ? ASN A 138 ? VAL A 119 ASN A 125 A 6 LEU A 163 ? THR A 167 ? LEU A 150 THR A 154 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 69 ? N LEU A 56 O ALA A 72 ? O ALA A 59 A 2 3 O GLN A 77 ? O GLN A 64 N PHE A 26 ? N PHE A 13 A 3 4 N ILE A 31 ? N ILE A 18 O VAL A 104 ? O VAL A 91 A 4 5 N PHE A 105 ? N PHE A 92 O ASN A 138 ? O ASN A 125 A 5 6 N LEU A 135 ? N LEU A 122 O LEU A 163 ? O LEU A 150 # _atom_sites.entry_id 2OIL _atom_sites.fract_transf_matrix[1][1] 0.01108 _atom_sites.fract_transf_matrix[1][2] 0.00000 _atom_sites.fract_transf_matrix[1][3] 0.00000 _atom_sites.fract_transf_matrix[2][1] 0.00000 _atom_sites.fract_transf_matrix[2][2] 0.01108 _atom_sites.fract_transf_matrix[2][3] 0.00000 _atom_sites.fract_transf_matrix[3][1] 0.00000 _atom_sites.fract_transf_matrix[3][2] 0.00000 _atom_sites.fract_transf_matrix[3][3] 0.02193 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P S X # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -12 ? ? ? A . n A 1 2 GLY 2 -11 ? ? ? A . n A 1 3 SER 3 -10 ? ? ? A . n A 1 4 SER 4 -9 ? ? ? A . n A 1 5 HIS 5 -8 ? ? ? A . n A 1 6 HIS 6 -7 ? ? ? A . n A 1 7 HIS 7 -6 ? ? ? A . n A 1 8 HIS 8 -5 ? ? ? A . n A 1 9 HIS 9 -4 ? ? ? A . n A 1 10 HIS 10 -3 ? ? ? A . n A 1 11 SER 11 -2 ? ? ? A . n A 1 12 SER 12 -1 ? ? ? A . n A 1 13 GLY 13 0 ? ? ? A . n A 1 14 LEU 14 1 ? ? ? A . n A 1 15 VAL 15 2 ? ? ? A . n A 1 16 PRO 16 3 ? ? ? A . n A 1 17 ARG 17 4 ? ? ? A . n A 1 18 GLY 18 5 ? ? ? A . n A 1 19 SER 19 6 ? ? ? A . n A 1 20 GLU 20 7 7 GLU GLU A . n A 1 21 ASP 21 8 8 ASP ASP A . n A 1 22 TYR 22 9 9 TYR TYR A . n A 1 23 ASN 23 10 10 ASN ASN A . n A 1 24 PHE 24 11 11 PHE PHE A . n A 1 25 VAL 25 12 12 VAL VAL A . n A 1 26 PHE 26 13 13 PHE PHE A . n A 1 27 LYS 27 14 14 LYS LYS A . n A 1 28 VAL 28 15 15 VAL VAL A . n A 1 29 VAL 29 16 16 VAL VAL A . n A 1 30 LEU 30 17 17 LEU LEU A . n A 1 31 ILE 31 18 18 ILE ILE A . n A 1 32 GLY 32 19 19 GLY GLY A . n A 1 33 GLU 33 20 20 GLU GLU A . n A 1 34 SER 34 21 21 SER SER A . n A 1 35 GLY 35 22 22 GLY GLY A . n A 1 36 VAL 36 23 23 VAL VAL A . n A 1 37 GLY 37 24 24 GLY GLY A . n A 1 38 LYS 38 25 25 LYS LYS A . n A 1 39 THR 39 26 26 THR THR A . n A 1 40 ASN 40 27 27 ASN ASN A . n A 1 41 LEU 41 28 28 LEU LEU A . n A 1 42 LEU 42 29 29 LEU LEU A . n A 1 43 SER 43 30 30 SER SER A . n A 1 44 ARG 44 31 31 ARG ARG A . n A 1 45 PHE 45 32 32 PHE PHE A . n A 1 46 THR 46 33 33 THR THR A . n A 1 47 ARG 47 34 34 ARG ARG A . n A 1 48 ASN 48 35 35 ASN ASN A . n A 1 49 GLU 49 36 36 GLU GLU A . n A 1 50 PHE 50 37 37 PHE PHE A . n A 1 51 SER 51 38 38 SER SER A . n A 1 52 HIS 52 39 39 HIS HIS A . n A 1 53 ASP 53 40 40 ASP ASP A . n A 1 54 SER 54 41 41 SER SER A . n A 1 55 ARG 55 42 42 ARG ARG A . n A 1 56 THR 56 43 43 THR THR A . n A 1 57 THR 57 44 44 THR THR A . n A 1 58 ILE 58 45 45 ILE ILE A . n A 1 59 GLY 59 46 46 GLY GLY A . n A 1 60 VAL 60 47 47 VAL VAL A . n A 1 61 GLU 61 48 48 GLU GLU A . n A 1 62 PHE 62 49 49 PHE PHE A . n A 1 63 SER 63 50 50 SER SER A . n A 1 64 THR 64 51 51 THR THR A . n A 1 65 ARG 65 52 52 ARG ARG A . n A 1 66 THR 66 53 53 THR THR A . n A 1 67 VAL 67 54 54 VAL VAL A . n A 1 68 MET 68 55 55 MET MET A . n A 1 69 LEU 69 56 56 LEU LEU A . n A 1 70 GLY 70 57 57 GLY GLY A . n A 1 71 THR 71 58 58 THR THR A . n A 1 72 ALA 72 59 59 ALA ALA A . n A 1 73 ALA 73 60 60 ALA ALA A . n A 1 74 VAL 74 61 61 VAL VAL A . n A 1 75 LYS 75 62 62 LYS LYS A . n A 1 76 ALA 76 63 63 ALA ALA A . n A 1 77 GLN 77 64 64 GLN GLN A . n A 1 78 ILE 78 65 65 ILE ILE A . n A 1 79 TRP 79 66 66 TRP TRP A . n A 1 80 ASP 80 67 67 ASP ASP A . n A 1 81 THR 81 68 68 THR THR A . n A 1 82 ALA 82 69 69 ALA ALA A . n A 1 83 GLY 83 70 70 GLY GLY A . n A 1 84 LEU 84 71 71 LEU LEU A . n A 1 85 GLU 85 72 72 GLU GLU A . n A 1 86 ARG 86 73 73 ARG ARG A . n A 1 87 TYR 87 74 74 TYR TYR A . n A 1 88 ARG 88 75 75 ARG ARG A . n A 1 89 ALA 89 76 76 ALA ALA A . n A 1 90 ILE 90 77 77 ILE ILE A . n A 1 91 THR 91 78 78 THR THR A . n A 1 92 SER 92 79 79 SER SER A . n A 1 93 ALA 93 80 80 ALA ALA A . n A 1 94 TYR 94 81 81 TYR TYR A . n A 1 95 TYR 95 82 82 TYR TYR A . n A 1 96 ARG 96 83 83 ARG ARG A . n A 1 97 GLY 97 84 84 GLY GLY A . n A 1 98 ALA 98 85 85 ALA ALA A . n A 1 99 VAL 99 86 86 VAL VAL A . n A 1 100 GLY 100 87 87 GLY GLY A . n A 1 101 ALA 101 88 88 ALA ALA A . n A 1 102 LEU 102 89 89 LEU LEU A . n A 1 103 LEU 103 90 90 LEU LEU A . n A 1 104 VAL 104 91 91 VAL VAL A . n A 1 105 PHE 105 92 92 PHE PHE A . n A 1 106 ASP 106 93 93 ASP ASP A . n A 1 107 LEU 107 94 94 LEU LEU A . n A 1 108 THR 108 95 95 THR THR A . n A 1 109 LYS 109 96 96 LYS LYS A . n A 1 110 HIS 110 97 97 HIS HIS A . n A 1 111 GLN 111 98 98 GLN GLN A . n A 1 112 THR 112 99 99 THR THR A . n A 1 113 TYR 113 100 100 TYR TYR A . n A 1 114 ALA 114 101 101 ALA ALA A . n A 1 115 VAL 115 102 102 VAL VAL A . n A 1 116 VAL 116 103 103 VAL VAL A . n A 1 117 GLU 117 104 104 GLU GLU A . n A 1 118 ARG 118 105 105 ARG ARG A . n A 1 119 TRP 119 106 106 TRP TRP A . n A 1 120 LEU 120 107 107 LEU LEU A . n A 1 121 LYS 121 108 108 LYS LYS A . n A 1 122 GLU 122 109 109 GLU GLU A . n A 1 123 LEU 123 110 110 LEU LEU A . n A 1 124 TYR 124 111 111 TYR TYR A . n A 1 125 ASP 125 112 112 ASP ASP A . n A 1 126 HIS 126 113 113 HIS HIS A . n A 1 127 ALA 127 114 114 ALA ALA A . n A 1 128 GLU 128 115 115 GLU GLU A . n A 1 129 ALA 129 116 116 ALA ALA A . n A 1 130 THR 130 117 117 THR THR A . n A 1 131 ILE 131 118 118 ILE ILE A . n A 1 132 VAL 132 119 119 VAL VAL A . n A 1 133 VAL 133 120 120 VAL VAL A . n A 1 134 MET 134 121 121 MET MET A . n A 1 135 LEU 135 122 122 LEU LEU A . n A 1 136 VAL 136 123 123 VAL VAL A . n A 1 137 GLY 137 124 124 GLY GLY A . n A 1 138 ASN 138 125 125 ASN ASN A . n A 1 139 LYS 139 126 126 LYS LYS A . n A 1 140 SER 140 127 127 SER SER A . n A 1 141 ASP 141 128 128 ASP ASP A . n A 1 142 LEU 142 129 129 LEU LEU A . n A 1 143 SER 143 130 130 SER SER A . n A 1 144 GLN 144 131 131 GLN GLN A . n A 1 145 ALA 145 132 132 ALA ALA A . n A 1 146 ARG 146 133 133 ARG ARG A . n A 1 147 GLU 147 134 134 GLU GLU A . n A 1 148 VAL 148 135 135 VAL VAL A . n A 1 149 PRO 149 136 136 PRO PRO A . n A 1 150 THR 150 137 137 THR THR A . n A 1 151 GLU 151 138 138 GLU GLU A . n A 1 152 GLU 152 139 139 GLU GLU A . n A 1 153 ALA 153 140 140 ALA ALA A . n A 1 154 ARG 154 141 141 ARG ARG A . n A 1 155 MET 155 142 142 MET MET A . n A 1 156 PHE 156 143 143 PHE PHE A . n A 1 157 ALA 157 144 144 ALA ALA A . n A 1 158 GLU 158 145 145 GLU GLU A . n A 1 159 ASN 159 146 146 ASN ASN A . n A 1 160 ASN 160 147 147 ASN ASN A . n A 1 161 GLY 161 148 148 GLY GLY A . n A 1 162 LEU 162 149 149 LEU LEU A . n A 1 163 LEU 163 150 150 LEU LEU A . n A 1 164 PHE 164 151 151 PHE PHE A . n A 1 165 LEU 165 152 152 LEU LEU A . n A 1 166 GLU 166 153 153 GLU GLU A . n A 1 167 THR 167 154 154 THR THR A . n A 1 168 SER 168 155 155 SER SER A . n A 1 169 ALA 169 156 156 ALA ALA A . n A 1 170 LEU 170 157 157 LEU LEU A . n A 1 171 ASP 171 158 158 ASP ASP A . n A 1 172 SER 172 159 159 SER SER A . n A 1 173 THR 173 160 160 THR THR A . n A 1 174 ASN 174 161 161 ASN ASN A . n A 1 175 VAL 175 162 162 VAL VAL A . n A 1 176 GLU 176 163 163 GLU GLU A . n A 1 177 LEU 177 164 164 LEU LEU A . n A 1 178 ALA 178 165 165 ALA ALA A . n A 1 179 PHE 179 166 166 PHE PHE A . n A 1 180 GLU 180 167 167 GLU GLU A . n A 1 181 THR 181 168 168 THR THR A . n A 1 182 VAL 182 169 169 VAL VAL A . n A 1 183 LEU 183 170 170 LEU LEU A . n A 1 184 LYS 184 171 171 LYS LYS A . n A 1 185 GLU 185 172 172 GLU GLU A . n A 1 186 ILE 186 173 173 ILE ILE A . n A 1 187 PHE 187 174 174 PHE PHE A . n A 1 188 ALA 188 175 175 ALA ALA A . n A 1 189 LYS 189 176 176 LYS LYS A . n A 1 190 VAL 190 177 177 VAL VAL A . n A 1 191 SER 191 178 178 SER SER A . n A 1 192 LYS 192 179 179 LYS LYS A . n A 1 193 GLN 193 180 180 GLN GLN A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'Structural Genomics Consortium' _pdbx_SG_project.initial_of_center SGC # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG 1 301 301 MG MG A . C 3 GDP 1 201 201 GDP GDP A . D 4 UNX 1 1001 1001 UNX UNX A . E 5 HOH 1 401 401 HOH HOH A . E 5 HOH 2 402 402 HOH HOH A . E 5 HOH 3 403 403 HOH HOH A . E 5 HOH 4 404 404 HOH HOH A . E 5 HOH 5 405 405 HOH HOH A . E 5 HOH 6 406 406 HOH HOH A . E 5 HOH 7 407 407 HOH HOH A . E 5 HOH 8 408 408 HOH HOH A . E 5 HOH 9 409 409 HOH HOH A . E 5 HOH 10 410 410 HOH HOH A . E 5 HOH 11 411 411 HOH HOH A . E 5 HOH 12 412 412 HOH HOH A . E 5 HOH 13 413 413 HOH HOH A . E 5 HOH 14 414 414 HOH HOH A . E 5 HOH 15 415 415 HOH HOH A . E 5 HOH 16 416 416 HOH HOH A . E 5 HOH 17 417 417 HOH HOH A . E 5 HOH 18 418 418 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OG1 ? A THR 39 ? A THR 26 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O3B ? C GDP . ? A GDP 201 ? 1_555 90.4 ? 2 OG1 ? A THR 39 ? A THR 26 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O ? E HOH . ? A HOH 401 ? 1_555 92.2 ? 3 O3B ? C GDP . ? A GDP 201 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O ? E HOH . ? A HOH 401 ? 1_555 93.4 ? 4 OG1 ? A THR 39 ? A THR 26 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O ? E HOH . ? A HOH 405 ? 1_555 87.5 ? 5 O3B ? C GDP . ? A GDP 201 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O ? E HOH . ? A HOH 405 ? 1_555 92.7 ? 6 O ? E HOH . ? A HOH 401 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O ? E HOH . ? A HOH 405 ? 1_555 173.9 ? 7 OG1 ? A THR 39 ? A THR 26 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O ? E HOH . ? A HOH 406 ? 1_555 93.3 ? 8 O3B ? C GDP . ? A GDP 201 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O ? E HOH . ? A HOH 406 ? 1_555 176.1 ? 9 O ? E HOH . ? A HOH 401 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O ? E HOH . ? A HOH 406 ? 1_555 87.6 ? 10 O ? E HOH . ? A HOH 405 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O ? E HOH . ? A HOH 406 ? 1_555 86.4 ? 11 OG1 ? A THR 39 ? A THR 26 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O ? E HOH . ? A HOH 410 ? 1_555 175.6 ? 12 O3B ? C GDP . ? A GDP 201 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O ? E HOH . ? A HOH 410 ? 1_555 85.2 ? 13 O ? E HOH . ? A HOH 401 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O ? E HOH . ? A HOH 410 ? 1_555 88.9 ? 14 O ? E HOH . ? A HOH 405 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O ? E HOH . ? A HOH 410 ? 1_555 91.9 ? 15 O ? E HOH . ? A HOH 406 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O ? E HOH . ? A HOH 410 ? 1_555 91.1 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-01-23 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-18 5 'Structure model' 1 4 2023-08-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Refinement description' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Derived calculations' 7 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' chem_comp_atom 3 5 'Structure model' chem_comp_bond 4 5 'Structure model' database_2 5 5 'Structure model' pdbx_initial_refinement_model 6 5 'Structure model' pdbx_struct_conn_angle 7 5 'Structure model' struct_conn 8 5 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.classification' 2 4 'Structure model' '_software.contact_author' 3 4 'Structure model' '_software.contact_author_email' 4 4 'Structure model' '_software.date' 5 4 'Structure model' '_software.language' 6 4 'Structure model' '_software.location' 7 4 'Structure model' '_software.name' 8 4 'Structure model' '_software.type' 9 4 'Structure model' '_software.version' 10 5 'Structure model' '_database_2.pdbx_DOI' 11 5 'Structure model' '_database_2.pdbx_database_accession' 12 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 13 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 14 5 'Structure model' '_pdbx_struct_conn_angle.value' 15 5 'Structure model' '_struct_conn.pdbx_dist_value' 16 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 17 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 18 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 19 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 20 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 21 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 22 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 23 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 24 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 25 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 26 5 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_phasing_MR.entry_id 2OIL _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details ? _pdbx_phasing_MR.R_factor ? _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 2.500 _pdbx_phasing_MR.d_res_low_rotation 28.540 _pdbx_phasing_MR.d_res_high_translation 2.500 _pdbx_phasing_MR.d_res_low_translation 28.540 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # _phasing.method mr # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal PHASER . ? ? 'R. J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 1 DENZO . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data reduction' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 2 SCALEPACK . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data scaling' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 3 REFMAC refmac_5.2.0019 24/04/2001 program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran ? 4 PDB_EXTRACT 1.701 'Nov. 1, 2005' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 5 # _pdbx_database_remark.id 300 _pdbx_database_remark.text ;BIOMOLECULE: 1 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT WHICH CONSISTS OF 1 CHAIN(S). AUTHORS STATE THAT THE BIOLOGICAL MOLECULE IS UNKNOWN. ; # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 72 ? ? -176.08 106.53 2 1 ARG A 73 ? ? -36.47 -32.06 3 1 LYS A 126 ? ? 77.51 38.67 4 1 SER A 159 ? ? 72.60 -11.58 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 7 ? CG ? A GLU 20 CG 2 1 Y 1 A GLU 7 ? CD ? A GLU 20 CD 3 1 Y 1 A GLU 7 ? OE1 ? A GLU 20 OE1 4 1 Y 1 A GLU 7 ? OE2 ? A GLU 20 OE2 5 1 Y 1 A ARG 42 ? CG ? A ARG 55 CG 6 1 Y 1 A ARG 42 ? CD ? A ARG 55 CD 7 1 Y 1 A ARG 42 ? NE ? A ARG 55 NE 8 1 Y 1 A ARG 42 ? CZ ? A ARG 55 CZ 9 1 Y 1 A ARG 42 ? NH1 ? A ARG 55 NH1 10 1 Y 1 A ARG 42 ? NH2 ? A ARG 55 NH2 11 1 Y 1 A LEU 71 ? CG ? A LEU 84 CG 12 1 Y 1 A LEU 71 ? CD1 ? A LEU 84 CD1 13 1 Y 1 A LEU 71 ? CD2 ? A LEU 84 CD2 14 1 Y 1 A GLN 98 ? CD ? A GLN 111 CD 15 1 Y 1 A GLN 98 ? OE1 ? A GLN 111 OE1 16 1 Y 1 A GLN 98 ? NE2 ? A GLN 111 NE2 17 1 Y 1 A ARG 105 ? NE ? A ARG 118 NE 18 1 Y 1 A ARG 105 ? CZ ? A ARG 118 CZ 19 1 Y 1 A ARG 105 ? NH1 ? A ARG 118 NH1 20 1 Y 1 A ARG 105 ? NH2 ? A ARG 118 NH2 21 1 Y 1 A LYS 108 ? CG ? A LYS 121 CG 22 1 Y 1 A LYS 108 ? CD ? A LYS 121 CD 23 1 Y 1 A LYS 108 ? CE ? A LYS 121 CE 24 1 Y 1 A LYS 108 ? NZ ? A LYS 121 NZ 25 1 Y 1 A GLU 109 ? CD ? A GLU 122 CD 26 1 Y 1 A GLU 109 ? OE1 ? A GLU 122 OE1 27 1 Y 1 A GLU 109 ? OE2 ? A GLU 122 OE2 28 1 Y 1 A GLN 131 ? CD ? A GLN 144 CD 29 1 Y 1 A GLN 131 ? OE1 ? A GLN 144 OE1 30 1 Y 1 A GLN 131 ? NE2 ? A GLN 144 NE2 31 1 Y 1 A GLU 138 ? CG ? A GLU 151 CG 32 1 Y 1 A GLU 138 ? CD ? A GLU 151 CD 33 1 Y 1 A GLU 138 ? OE1 ? A GLU 151 OE1 34 1 Y 1 A GLU 138 ? OE2 ? A GLU 151 OE2 35 1 Y 1 A ARG 141 ? NE ? A ARG 154 NE 36 1 Y 1 A ARG 141 ? CZ ? A ARG 154 CZ 37 1 Y 1 A ARG 141 ? NH1 ? A ARG 154 NH1 38 1 Y 1 A ARG 141 ? NH2 ? A ARG 154 NH2 39 1 Y 1 A LYS 171 ? CE ? A LYS 184 CE 40 1 Y 1 A LYS 171 ? NZ ? A LYS 184 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -12 ? A MET 1 2 1 Y 1 A GLY -11 ? A GLY 2 3 1 Y 1 A SER -10 ? A SER 3 4 1 Y 1 A SER -9 ? A SER 4 5 1 Y 1 A HIS -8 ? A HIS 5 6 1 Y 1 A HIS -7 ? A HIS 6 7 1 Y 1 A HIS -6 ? A HIS 7 8 1 Y 1 A HIS -5 ? A HIS 8 9 1 Y 1 A HIS -4 ? A HIS 9 10 1 Y 1 A HIS -3 ? A HIS 10 11 1 Y 1 A SER -2 ? A SER 11 12 1 Y 1 A SER -1 ? A SER 12 13 1 Y 1 A GLY 0 ? A GLY 13 14 1 Y 1 A LEU 1 ? A LEU 14 15 1 Y 1 A VAL 2 ? A VAL 15 16 1 Y 1 A PRO 3 ? A PRO 16 17 1 Y 1 A ARG 4 ? A ARG 17 18 1 Y 1 A GLY 5 ? A GLY 18 19 1 Y 1 A SER 6 ? A SER 19 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GDP PB P N N 74 GDP O1B O N N 75 GDP O2B O N N 76 GDP O3B O N N 77 GDP O3A O N N 78 GDP PA P N N 79 GDP O1A O N N 80 GDP O2A O N N 81 GDP "O5'" O N N 82 GDP "C5'" C N N 83 GDP "C4'" C N R 84 GDP "O4'" O N N 85 GDP "C3'" C N S 86 GDP "O3'" O N N 87 GDP "C2'" C N R 88 GDP "O2'" O N N 89 GDP "C1'" C N R 90 GDP N9 N Y N 91 GDP C8 C Y N 92 GDP N7 N Y N 93 GDP C5 C Y N 94 GDP C6 C N N 95 GDP O6 O N N 96 GDP N1 N N N 97 GDP C2 C N N 98 GDP N2 N N N 99 GDP N3 N N N 100 GDP C4 C Y N 101 GDP HOB2 H N N 102 GDP HOB3 H N N 103 GDP HOA2 H N N 104 GDP "H5'" H N N 105 GDP "H5''" H N N 106 GDP "H4'" H N N 107 GDP "H3'" H N N 108 GDP "HO3'" H N N 109 GDP "H2'" H N N 110 GDP "HO2'" H N N 111 GDP "H1'" H N N 112 GDP H8 H N N 113 GDP HN1 H N N 114 GDP HN21 H N N 115 GDP HN22 H N N 116 GLN N N N N 117 GLN CA C N S 118 GLN C C N N 119 GLN O O N N 120 GLN CB C N N 121 GLN CG C N N 122 GLN CD C N N 123 GLN OE1 O N N 124 GLN NE2 N N N 125 GLN OXT O N N 126 GLN H H N N 127 GLN H2 H N N 128 GLN HA H N N 129 GLN HB2 H N N 130 GLN HB3 H N N 131 GLN HG2 H N N 132 GLN HG3 H N N 133 GLN HE21 H N N 134 GLN HE22 H N N 135 GLN HXT H N N 136 GLU N N N N 137 GLU CA C N S 138 GLU C C N N 139 GLU O O N N 140 GLU CB C N N 141 GLU CG C N N 142 GLU CD C N N 143 GLU OE1 O N N 144 GLU OE2 O N N 145 GLU OXT O N N 146 GLU H H N N 147 GLU H2 H N N 148 GLU HA H N N 149 GLU HB2 H N N 150 GLU HB3 H N N 151 GLU HG2 H N N 152 GLU HG3 H N N 153 GLU HE2 H N N 154 GLU HXT H N N 155 GLY N N N N 156 GLY CA C N N 157 GLY C C N N 158 GLY O O N N 159 GLY OXT O N N 160 GLY H H N N 161 GLY H2 H N N 162 GLY HA2 H N N 163 GLY HA3 H N N 164 GLY HXT H N N 165 HIS N N N N 166 HIS CA C N S 167 HIS C C N N 168 HIS O O N N 169 HIS CB C N N 170 HIS CG C Y N 171 HIS ND1 N Y N 172 HIS CD2 C Y N 173 HIS CE1 C Y N 174 HIS NE2 N Y N 175 HIS OXT O N N 176 HIS H H N N 177 HIS H2 H N N 178 HIS HA H N N 179 HIS HB2 H N N 180 HIS HB3 H N N 181 HIS HD1 H N N 182 HIS HD2 H N N 183 HIS HE1 H N N 184 HIS HE2 H N N 185 HIS HXT H N N 186 HOH O O N N 187 HOH H1 H N N 188 HOH H2 H N N 189 ILE N N N N 190 ILE CA C N S 191 ILE C C N N 192 ILE O O N N 193 ILE CB C N S 194 ILE CG1 C N N 195 ILE CG2 C N N 196 ILE CD1 C N N 197 ILE OXT O N N 198 ILE H H N N 199 ILE H2 H N N 200 ILE HA H N N 201 ILE HB H N N 202 ILE HG12 H N N 203 ILE HG13 H N N 204 ILE HG21 H N N 205 ILE HG22 H N N 206 ILE HG23 H N N 207 ILE HD11 H N N 208 ILE HD12 H N N 209 ILE HD13 H N N 210 ILE HXT H N N 211 LEU N N N N 212 LEU CA C N S 213 LEU C C N N 214 LEU O O N N 215 LEU CB C N N 216 LEU CG C N N 217 LEU CD1 C N N 218 LEU CD2 C N N 219 LEU OXT O N N 220 LEU H H N N 221 LEU H2 H N N 222 LEU HA H N N 223 LEU HB2 H N N 224 LEU HB3 H N N 225 LEU HG H N N 226 LEU HD11 H N N 227 LEU HD12 H N N 228 LEU HD13 H N N 229 LEU HD21 H N N 230 LEU HD22 H N N 231 LEU HD23 H N N 232 LEU HXT H N N 233 LYS N N N N 234 LYS CA C N S 235 LYS C C N N 236 LYS O O N N 237 LYS CB C N N 238 LYS CG C N N 239 LYS CD C N N 240 LYS CE C N N 241 LYS NZ N N N 242 LYS OXT O N N 243 LYS H H N N 244 LYS H2 H N N 245 LYS HA H N N 246 LYS HB2 H N N 247 LYS HB3 H N N 248 LYS HG2 H N N 249 LYS HG3 H N N 250 LYS HD2 H N N 251 LYS HD3 H N N 252 LYS HE2 H N N 253 LYS HE3 H N N 254 LYS HZ1 H N N 255 LYS HZ2 H N N 256 LYS HZ3 H N N 257 LYS HXT H N N 258 MET N N N N 259 MET CA C N S 260 MET C C N N 261 MET O O N N 262 MET CB C N N 263 MET CG C N N 264 MET SD S N N 265 MET CE C N N 266 MET OXT O N N 267 MET H H N N 268 MET H2 H N N 269 MET HA H N N 270 MET HB2 H N N 271 MET HB3 H N N 272 MET HG2 H N N 273 MET HG3 H N N 274 MET HE1 H N N 275 MET HE2 H N N 276 MET HE3 H N N 277 MET HXT H N N 278 MG MG MG N N 279 PHE N N N N 280 PHE CA C N S 281 PHE C C N N 282 PHE O O N N 283 PHE CB C N N 284 PHE CG C Y N 285 PHE CD1 C Y N 286 PHE CD2 C Y N 287 PHE CE1 C Y N 288 PHE CE2 C Y N 289 PHE CZ C Y N 290 PHE OXT O N N 291 PHE H H N N 292 PHE H2 H N N 293 PHE HA H N N 294 PHE HB2 H N N 295 PHE HB3 H N N 296 PHE HD1 H N N 297 PHE HD2 H N N 298 PHE HE1 H N N 299 PHE HE2 H N N 300 PHE HZ H N N 301 PHE HXT H N N 302 PRO N N N N 303 PRO CA C N S 304 PRO C C N N 305 PRO O O N N 306 PRO CB C N N 307 PRO CG C N N 308 PRO CD C N N 309 PRO OXT O N N 310 PRO H H N N 311 PRO HA H N N 312 PRO HB2 H N N 313 PRO HB3 H N N 314 PRO HG2 H N N 315 PRO HG3 H N N 316 PRO HD2 H N N 317 PRO HD3 H N N 318 PRO HXT H N N 319 SER N N N N 320 SER CA C N S 321 SER C C N N 322 SER O O N N 323 SER CB C N N 324 SER OG O N N 325 SER OXT O N N 326 SER H H N N 327 SER H2 H N N 328 SER HA H N N 329 SER HB2 H N N 330 SER HB3 H N N 331 SER HG H N N 332 SER HXT H N N 333 THR N N N N 334 THR CA C N S 335 THR C C N N 336 THR O O N N 337 THR CB C N R 338 THR OG1 O N N 339 THR CG2 C N N 340 THR OXT O N N 341 THR H H N N 342 THR H2 H N N 343 THR HA H N N 344 THR HB H N N 345 THR HG1 H N N 346 THR HG21 H N N 347 THR HG22 H N N 348 THR HG23 H N N 349 THR HXT H N N 350 TRP N N N N 351 TRP CA C N S 352 TRP C C N N 353 TRP O O N N 354 TRP CB C N N 355 TRP CG C Y N 356 TRP CD1 C Y N 357 TRP CD2 C Y N 358 TRP NE1 N Y N 359 TRP CE2 C Y N 360 TRP CE3 C Y N 361 TRP CZ2 C Y N 362 TRP CZ3 C Y N 363 TRP CH2 C Y N 364 TRP OXT O N N 365 TRP H H N N 366 TRP H2 H N N 367 TRP HA H N N 368 TRP HB2 H N N 369 TRP HB3 H N N 370 TRP HD1 H N N 371 TRP HE1 H N N 372 TRP HE3 H N N 373 TRP HZ2 H N N 374 TRP HZ3 H N N 375 TRP HH2 H N N 376 TRP HXT H N N 377 TYR N N N N 378 TYR CA C N S 379 TYR C C N N 380 TYR O O N N 381 TYR CB C N N 382 TYR CG C Y N 383 TYR CD1 C Y N 384 TYR CD2 C Y N 385 TYR CE1 C Y N 386 TYR CE2 C Y N 387 TYR CZ C Y N 388 TYR OH O N N 389 TYR OXT O N N 390 TYR H H N N 391 TYR H2 H N N 392 TYR HA H N N 393 TYR HB2 H N N 394 TYR HB3 H N N 395 TYR HD1 H N N 396 TYR HD2 H N N 397 TYR HE1 H N N 398 TYR HE2 H N N 399 TYR HH H N N 400 TYR HXT H N N 401 VAL N N N N 402 VAL CA C N S 403 VAL C C N N 404 VAL O O N N 405 VAL CB C N N 406 VAL CG1 C N N 407 VAL CG2 C N N 408 VAL OXT O N N 409 VAL H H N N 410 VAL H2 H N N 411 VAL HA H N N 412 VAL HB H N N 413 VAL HG11 H N N 414 VAL HG12 H N N 415 VAL HG13 H N N 416 VAL HG21 H N N 417 VAL HG22 H N N 418 VAL HG23 H N N 419 VAL HXT H N N 420 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GDP PB O1B doub N N 70 GDP PB O2B sing N N 71 GDP PB O3B sing N N 72 GDP PB O3A sing N N 73 GDP O2B HOB2 sing N N 74 GDP O3B HOB3 sing N N 75 GDP O3A PA sing N N 76 GDP PA O1A doub N N 77 GDP PA O2A sing N N 78 GDP PA "O5'" sing N N 79 GDP O2A HOA2 sing N N 80 GDP "O5'" "C5'" sing N N 81 GDP "C5'" "C4'" sing N N 82 GDP "C5'" "H5'" sing N N 83 GDP "C5'" "H5''" sing N N 84 GDP "C4'" "O4'" sing N N 85 GDP "C4'" "C3'" sing N N 86 GDP "C4'" "H4'" sing N N 87 GDP "O4'" "C1'" sing N N 88 GDP "C3'" "O3'" sing N N 89 GDP "C3'" "C2'" sing N N 90 GDP "C3'" "H3'" sing N N 91 GDP "O3'" "HO3'" sing N N 92 GDP "C2'" "O2'" sing N N 93 GDP "C2'" "C1'" sing N N 94 GDP "C2'" "H2'" sing N N 95 GDP "O2'" "HO2'" sing N N 96 GDP "C1'" N9 sing N N 97 GDP "C1'" "H1'" sing N N 98 GDP N9 C8 sing Y N 99 GDP N9 C4 sing Y N 100 GDP C8 N7 doub Y N 101 GDP C8 H8 sing N N 102 GDP N7 C5 sing Y N 103 GDP C5 C6 sing N N 104 GDP C5 C4 doub Y N 105 GDP C6 O6 doub N N 106 GDP C6 N1 sing N N 107 GDP N1 C2 sing N N 108 GDP N1 HN1 sing N N 109 GDP C2 N2 sing N N 110 GDP C2 N3 doub N N 111 GDP N2 HN21 sing N N 112 GDP N2 HN22 sing N N 113 GDP N3 C4 sing N N 114 GLN N CA sing N N 115 GLN N H sing N N 116 GLN N H2 sing N N 117 GLN CA C sing N N 118 GLN CA CB sing N N 119 GLN CA HA sing N N 120 GLN C O doub N N 121 GLN C OXT sing N N 122 GLN CB CG sing N N 123 GLN CB HB2 sing N N 124 GLN CB HB3 sing N N 125 GLN CG CD sing N N 126 GLN CG HG2 sing N N 127 GLN CG HG3 sing N N 128 GLN CD OE1 doub N N 129 GLN CD NE2 sing N N 130 GLN NE2 HE21 sing N N 131 GLN NE2 HE22 sing N N 132 GLN OXT HXT sing N N 133 GLU N CA sing N N 134 GLU N H sing N N 135 GLU N H2 sing N N 136 GLU CA C sing N N 137 GLU CA CB sing N N 138 GLU CA HA sing N N 139 GLU C O doub N N 140 GLU C OXT sing N N 141 GLU CB CG sing N N 142 GLU CB HB2 sing N N 143 GLU CB HB3 sing N N 144 GLU CG CD sing N N 145 GLU CG HG2 sing N N 146 GLU CG HG3 sing N N 147 GLU CD OE1 doub N N 148 GLU CD OE2 sing N N 149 GLU OE2 HE2 sing N N 150 GLU OXT HXT sing N N 151 GLY N CA sing N N 152 GLY N H sing N N 153 GLY N H2 sing N N 154 GLY CA C sing N N 155 GLY CA HA2 sing N N 156 GLY CA HA3 sing N N 157 GLY C O doub N N 158 GLY C OXT sing N N 159 GLY OXT HXT sing N N 160 HIS N CA sing N N 161 HIS N H sing N N 162 HIS N H2 sing N N 163 HIS CA C sing N N 164 HIS CA CB sing N N 165 HIS CA HA sing N N 166 HIS C O doub N N 167 HIS C OXT sing N N 168 HIS CB CG sing N N 169 HIS CB HB2 sing N N 170 HIS CB HB3 sing N N 171 HIS CG ND1 sing Y N 172 HIS CG CD2 doub Y N 173 HIS ND1 CE1 doub Y N 174 HIS ND1 HD1 sing N N 175 HIS CD2 NE2 sing Y N 176 HIS CD2 HD2 sing N N 177 HIS CE1 NE2 sing Y N 178 HIS CE1 HE1 sing N N 179 HIS NE2 HE2 sing N N 180 HIS OXT HXT sing N N 181 HOH O H1 sing N N 182 HOH O H2 sing N N 183 ILE N CA sing N N 184 ILE N H sing N N 185 ILE N H2 sing N N 186 ILE CA C sing N N 187 ILE CA CB sing N N 188 ILE CA HA sing N N 189 ILE C O doub N N 190 ILE C OXT sing N N 191 ILE CB CG1 sing N N 192 ILE CB CG2 sing N N 193 ILE CB HB sing N N 194 ILE CG1 CD1 sing N N 195 ILE CG1 HG12 sing N N 196 ILE CG1 HG13 sing N N 197 ILE CG2 HG21 sing N N 198 ILE CG2 HG22 sing N N 199 ILE CG2 HG23 sing N N 200 ILE CD1 HD11 sing N N 201 ILE CD1 HD12 sing N N 202 ILE CD1 HD13 sing N N 203 ILE OXT HXT sing N N 204 LEU N CA sing N N 205 LEU N H sing N N 206 LEU N H2 sing N N 207 LEU CA C sing N N 208 LEU CA CB sing N N 209 LEU CA HA sing N N 210 LEU C O doub N N 211 LEU C OXT sing N N 212 LEU CB CG sing N N 213 LEU CB HB2 sing N N 214 LEU CB HB3 sing N N 215 LEU CG CD1 sing N N 216 LEU CG CD2 sing N N 217 LEU CG HG sing N N 218 LEU CD1 HD11 sing N N 219 LEU CD1 HD12 sing N N 220 LEU CD1 HD13 sing N N 221 LEU CD2 HD21 sing N N 222 LEU CD2 HD22 sing N N 223 LEU CD2 HD23 sing N N 224 LEU OXT HXT sing N N 225 LYS N CA sing N N 226 LYS N H sing N N 227 LYS N H2 sing N N 228 LYS CA C sing N N 229 LYS CA CB sing N N 230 LYS CA HA sing N N 231 LYS C O doub N N 232 LYS C OXT sing N N 233 LYS CB CG sing N N 234 LYS CB HB2 sing N N 235 LYS CB HB3 sing N N 236 LYS CG CD sing N N 237 LYS CG HG2 sing N N 238 LYS CG HG3 sing N N 239 LYS CD CE sing N N 240 LYS CD HD2 sing N N 241 LYS CD HD3 sing N N 242 LYS CE NZ sing N N 243 LYS CE HE2 sing N N 244 LYS CE HE3 sing N N 245 LYS NZ HZ1 sing N N 246 LYS NZ HZ2 sing N N 247 LYS NZ HZ3 sing N N 248 LYS OXT HXT sing N N 249 MET N CA sing N N 250 MET N H sing N N 251 MET N H2 sing N N 252 MET CA C sing N N 253 MET CA CB sing N N 254 MET CA HA sing N N 255 MET C O doub N N 256 MET C OXT sing N N 257 MET CB CG sing N N 258 MET CB HB2 sing N N 259 MET CB HB3 sing N N 260 MET CG SD sing N N 261 MET CG HG2 sing N N 262 MET CG HG3 sing N N 263 MET SD CE sing N N 264 MET CE HE1 sing N N 265 MET CE HE2 sing N N 266 MET CE HE3 sing N N 267 MET OXT HXT sing N N 268 PHE N CA sing N N 269 PHE N H sing N N 270 PHE N H2 sing N N 271 PHE CA C sing N N 272 PHE CA CB sing N N 273 PHE CA HA sing N N 274 PHE C O doub N N 275 PHE C OXT sing N N 276 PHE CB CG sing N N 277 PHE CB HB2 sing N N 278 PHE CB HB3 sing N N 279 PHE CG CD1 doub Y N 280 PHE CG CD2 sing Y N 281 PHE CD1 CE1 sing Y N 282 PHE CD1 HD1 sing N N 283 PHE CD2 CE2 doub Y N 284 PHE CD2 HD2 sing N N 285 PHE CE1 CZ doub Y N 286 PHE CE1 HE1 sing N N 287 PHE CE2 CZ sing Y N 288 PHE CE2 HE2 sing N N 289 PHE CZ HZ sing N N 290 PHE OXT HXT sing N N 291 PRO N CA sing N N 292 PRO N CD sing N N 293 PRO N H sing N N 294 PRO CA C sing N N 295 PRO CA CB sing N N 296 PRO CA HA sing N N 297 PRO C O doub N N 298 PRO C OXT sing N N 299 PRO CB CG sing N N 300 PRO CB HB2 sing N N 301 PRO CB HB3 sing N N 302 PRO CG CD sing N N 303 PRO CG HG2 sing N N 304 PRO CG HG3 sing N N 305 PRO CD HD2 sing N N 306 PRO CD HD3 sing N N 307 PRO OXT HXT sing N N 308 SER N CA sing N N 309 SER N H sing N N 310 SER N H2 sing N N 311 SER CA C sing N N 312 SER CA CB sing N N 313 SER CA HA sing N N 314 SER C O doub N N 315 SER C OXT sing N N 316 SER CB OG sing N N 317 SER CB HB2 sing N N 318 SER CB HB3 sing N N 319 SER OG HG sing N N 320 SER OXT HXT sing N N 321 THR N CA sing N N 322 THR N H sing N N 323 THR N H2 sing N N 324 THR CA C sing N N 325 THR CA CB sing N N 326 THR CA HA sing N N 327 THR C O doub N N 328 THR C OXT sing N N 329 THR CB OG1 sing N N 330 THR CB CG2 sing N N 331 THR CB HB sing N N 332 THR OG1 HG1 sing N N 333 THR CG2 HG21 sing N N 334 THR CG2 HG22 sing N N 335 THR CG2 HG23 sing N N 336 THR OXT HXT sing N N 337 TRP N CA sing N N 338 TRP N H sing N N 339 TRP N H2 sing N N 340 TRP CA C sing N N 341 TRP CA CB sing N N 342 TRP CA HA sing N N 343 TRP C O doub N N 344 TRP C OXT sing N N 345 TRP CB CG sing N N 346 TRP CB HB2 sing N N 347 TRP CB HB3 sing N N 348 TRP CG CD1 doub Y N 349 TRP CG CD2 sing Y N 350 TRP CD1 NE1 sing Y N 351 TRP CD1 HD1 sing N N 352 TRP CD2 CE2 doub Y N 353 TRP CD2 CE3 sing Y N 354 TRP NE1 CE2 sing Y N 355 TRP NE1 HE1 sing N N 356 TRP CE2 CZ2 sing Y N 357 TRP CE3 CZ3 doub Y N 358 TRP CE3 HE3 sing N N 359 TRP CZ2 CH2 doub Y N 360 TRP CZ2 HZ2 sing N N 361 TRP CZ3 CH2 sing Y N 362 TRP CZ3 HZ3 sing N N 363 TRP CH2 HH2 sing N N 364 TRP OXT HXT sing N N 365 TYR N CA sing N N 366 TYR N H sing N N 367 TYR N H2 sing N N 368 TYR CA C sing N N 369 TYR CA CB sing N N 370 TYR CA HA sing N N 371 TYR C O doub N N 372 TYR C OXT sing N N 373 TYR CB CG sing N N 374 TYR CB HB2 sing N N 375 TYR CB HB3 sing N N 376 TYR CG CD1 doub Y N 377 TYR CG CD2 sing Y N 378 TYR CD1 CE1 sing Y N 379 TYR CD1 HD1 sing N N 380 TYR CD2 CE2 doub Y N 381 TYR CD2 HD2 sing N N 382 TYR CE1 CZ doub Y N 383 TYR CE1 HE1 sing N N 384 TYR CE2 CZ sing Y N 385 TYR CE2 HE2 sing N N 386 TYR CZ OH sing N N 387 TYR OH HH sing N N 388 TYR OXT HXT sing N N 389 VAL N CA sing N N 390 VAL N H sing N N 391 VAL N H2 sing N N 392 VAL CA C sing N N 393 VAL CA CB sing N N 394 VAL CA HA sing N N 395 VAL C O doub N N 396 VAL C OXT sing N N 397 VAL CB CG1 sing N N 398 VAL CB CG2 sing N N 399 VAL CB HB sing N N 400 VAL CG1 HG11 sing N N 401 VAL CG1 HG12 sing N N 402 VAL CG1 HG13 sing N N 403 VAL CG2 HG21 sing N N 404 VAL CG2 HG22 sing N N 405 VAL CG2 HG23 sing N N 406 VAL OXT HXT sing N N 407 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 "GUANOSINE-5'-DIPHOSPHATE" GDP 4 'UNKNOWN ATOM OR ION' UNX 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1OIX _pdbx_initial_refinement_model.details 'pdb entry 1OIX' #