data_2OIU # _entry.id 2OIU # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2OIU pdb_00002oiu 10.2210/pdb2oiu/pdb NDB UR0110 ? ? RCSB RCSB041189 ? ? WWPDB D_1000041189 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-03-13 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2018-01-24 5 'Structure model' 1 4 2023-12-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Structure summary' 5 5 'Structure model' 'Data collection' 6 5 'Structure model' 'Database references' 7 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' audit_author 2 5 'Structure model' chem_comp_atom 3 5 'Structure model' chem_comp_bond 4 5 'Structure model' database_2 5 5 'Structure model' pdbx_struct_conn_angle 6 5 'Structure model' struct_conn 7 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_audit_author.name' 2 5 'Structure model' '_database_2.pdbx_DOI' 3 5 'Structure model' '_database_2.pdbx_database_accession' 4 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 5 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 7 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 8 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 9 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 10 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 11 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 12 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 13 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 14 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 15 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 16 5 'Structure model' '_pdbx_struct_conn_angle.value' 17 5 'Structure model' '_struct_conn.pdbx_dist_value' 18 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 19 5 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 20 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 21 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 22 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 23 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 24 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 25 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 26 5 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 27 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 28 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 29 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 30 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 31 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 32 5 'Structure model' '_struct_conn.ptnr2_label_seq_id' 33 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 34 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 35 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2OIU _pdbx_database_status.recvd_initial_deposition_date 2007-01-11 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Robertson, M.P.' 1 'Scott, W.G.' 2 # _citation.id primary _citation.title 'The structural basis of ribozyme-catalyzed RNA assembly.' _citation.journal_abbrev Science _citation.journal_volume 315 _citation.page_first 1549 _citation.page_last 1553 _citation.year 2007 _citation.journal_id_ASTM SCIEAS _citation.country US _citation.journal_id_ISSN 0036-8075 _citation.journal_id_CSD 0038 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17363667 _citation.pdbx_database_id_DOI 10.1126/science.1136231 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Robertson, M.P.' 1 ? primary 'Scott, W.G.' 2 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'L1 Ribozyme RNA Ligase' 23010.779 2 ? ? ? ? 2 non-polymer syn 'MAGNESIUM ION' 24.305 7 ? ? ? ? 3 water nat water 18.015 26 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code GGACCUCGGCGAAAGCCGUUCGACCAGCGAAAGCUCUUAGACAGGAGGUUAGGUGCUCCGAAAGGAGCACU _entity_poly.pdbx_seq_one_letter_code_can GGACCUCGGCGAAAGCCGUUCGACCAGCGAAAGCUCUUAGACAGGAGGUUAGGUGCUCCGAAAGGAGCACU _entity_poly.pdbx_strand_id P,Q _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 G n 1 3 A n 1 4 C n 1 5 C n 1 6 U n 1 7 C n 1 8 G n 1 9 G n 1 10 C n 1 11 G n 1 12 A n 1 13 A n 1 14 A n 1 15 G n 1 16 C n 1 17 C n 1 18 G n 1 19 U n 1 20 U n 1 21 C n 1 22 G n 1 23 A n 1 24 C n 1 25 C n 1 26 A n 1 27 G n 1 28 C n 1 29 G n 1 30 A n 1 31 A n 1 32 A n 1 33 G n 1 34 C n 1 35 U n 1 36 C n 1 37 U n 1 38 U n 1 39 A n 1 40 G n 1 41 A n 1 42 C n 1 43 A n 1 44 G n 1 45 G n 1 46 A n 1 47 G n 1 48 G n 1 49 U n 1 50 U n 1 51 A n 1 52 G n 1 53 G n 1 54 U n 1 55 G n 1 56 C n 1 57 U n 1 58 C n 1 59 C n 1 60 G n 1 61 A n 1 62 A n 1 63 A n 1 64 G n 1 65 G n 1 66 A n 1 67 G n 1 68 C n 1 69 A n 1 70 C n 1 71 U n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'T7 RNA transcription product' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 HOH non-polymer . WATER ? 'H2 O' 18.015 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 1 1 G G P . n A 1 2 G 2 2 2 G G P . n A 1 3 A 3 3 3 A A P . n A 1 4 C 4 4 4 C C P . n A 1 5 C 5 5 5 C C P . n A 1 6 U 6 6 6 U U P . n A 1 7 C 7 7 7 C C P . n A 1 8 G 8 8 8 G G P . n A 1 9 G 9 9 9 G G P . n A 1 10 C 10 10 10 C C P . n A 1 11 G 11 11 11 G G P . n A 1 12 A 12 12 12 A A P . n A 1 13 A 13 13 13 A A P . n A 1 14 A 14 14 14 A A P . n A 1 15 G 15 15 15 G G P . n A 1 16 C 16 16 16 C C P . n A 1 17 C 17 17 17 C C P . n A 1 18 G 18 18 18 G G P . n A 1 19 U 19 19 19 U U P . n A 1 20 U 20 20 20 U U P . n A 1 21 C 21 21 21 C C P . n A 1 22 G 22 22 22 G G P . n A 1 23 A 23 23 23 A A P . n A 1 24 C 24 24 24 C C P . n A 1 25 C 25 25 25 C C P . n A 1 26 A 26 26 26 A A P . n A 1 27 G 27 27 27 G G P . n A 1 28 C 28 28 28 C C P . n A 1 29 G 29 29 29 G G P . n A 1 30 A 30 30 30 A A P . n A 1 31 A 31 31 31 A A P . n A 1 32 A 32 32 32 A A P . n A 1 33 G 33 33 33 G G P . n A 1 34 C 34 34 34 C C P . n A 1 35 U 35 35 35 U U P . n A 1 36 C 36 36 36 C C P . n A 1 37 U 37 37 37 U U P . n A 1 38 U 38 38 38 U U P . n A 1 39 A 39 39 39 A A P . n A 1 40 G 40 40 40 G G P . n A 1 41 A 41 41 41 A A P . n A 1 42 C 42 42 42 C C P . n A 1 43 A 43 43 43 A A P . n A 1 44 G 44 44 44 G G P . n A 1 45 G 45 45 45 G G P . n A 1 46 A 46 46 46 A A P . n A 1 47 G 47 47 47 G G P . n A 1 48 G 48 48 48 G G P . n A 1 49 U 49 49 49 U U P . n A 1 50 U 50 50 50 U U P . n A 1 51 A 51 51 51 A A P . n A 1 52 G 52 52 52 G G P . n A 1 53 G 53 53 53 G G P . n A 1 54 U 54 54 54 U U P . n A 1 55 G 55 55 55 G G P . n A 1 56 C 56 56 56 C C P . n A 1 57 U 57 57 57 U U P . n A 1 58 C 58 58 58 C C P . n A 1 59 C 59 59 59 C C P . n A 1 60 G 60 60 60 G G P . n A 1 61 A 61 61 61 A A P . n A 1 62 A 62 62 62 A A P . n A 1 63 A 63 63 63 A A P . n A 1 64 G 64 64 64 G G P . n A 1 65 G 65 65 65 G G P . n A 1 66 A 66 66 66 A A P . n A 1 67 G 67 67 67 G G P . n A 1 68 C 68 68 68 C C P . n A 1 69 A 69 69 69 A A P . n A 1 70 C 70 70 70 C C P . n A 1 71 U 71 71 71 U U P . n B 1 1 G 1 1 1 G G Q . n B 1 2 G 2 2 2 G G Q . n B 1 3 A 3 3 3 A A Q . n B 1 4 C 4 4 4 C C Q . n B 1 5 C 5 5 5 C C Q . n B 1 6 U 6 6 6 U U Q . n B 1 7 C 7 7 7 C C Q . n B 1 8 G 8 8 8 G G Q . n B 1 9 G 9 9 9 G G Q . n B 1 10 C 10 10 10 C C Q . n B 1 11 G 11 11 11 G G Q . n B 1 12 A 12 12 12 A A Q . n B 1 13 A 13 13 13 A A Q . n B 1 14 A 14 14 14 A A Q . n B 1 15 G 15 15 15 G G Q . n B 1 16 C 16 16 16 C C Q . n B 1 17 C 17 17 17 C C Q . n B 1 18 G 18 18 18 G G Q . n B 1 19 U 19 19 19 U U Q . n B 1 20 U 20 20 20 U U Q . n B 1 21 C 21 21 21 C C Q . n B 1 22 G 22 22 22 G G Q . n B 1 23 A 23 23 23 A A Q . n B 1 24 C 24 24 24 C C Q . n B 1 25 C 25 25 25 C C Q . n B 1 26 A 26 26 26 A A Q . n B 1 27 G 27 27 27 G G Q . n B 1 28 C 28 28 28 C C Q . n B 1 29 G 29 29 29 G G Q . n B 1 30 A 30 30 30 A A Q . n B 1 31 A 31 31 31 A A Q . n B 1 32 A 32 32 32 A A Q . n B 1 33 G 33 33 33 G G Q . n B 1 34 C 34 34 34 C C Q . n B 1 35 U 35 35 35 U U Q . n B 1 36 C 36 36 36 C C Q . n B 1 37 U 37 37 37 U U Q . n B 1 38 U 38 38 38 U U Q . n B 1 39 A 39 39 39 A A Q . n B 1 40 G 40 40 40 G G Q . n B 1 41 A 41 41 41 A A Q . n B 1 42 C 42 42 42 C C Q . n B 1 43 A 43 43 43 A A Q . n B 1 44 G 44 44 44 G G Q . n B 1 45 G 45 45 45 G G Q . n B 1 46 A 46 46 46 A A Q . n B 1 47 G 47 47 47 G G Q . n B 1 48 G 48 48 48 G G Q . n B 1 49 U 49 49 49 U U Q . n B 1 50 U 50 50 50 U U Q . n B 1 51 A 51 51 51 A A Q . n B 1 52 G 52 52 52 G G Q . n B 1 53 G 53 53 53 G G Q . n B 1 54 U 54 54 54 U U Q . n B 1 55 G 55 55 55 G G Q . n B 1 56 C 56 56 56 C C Q . n B 1 57 U 57 57 57 U U Q . n B 1 58 C 58 58 58 C C Q . n B 1 59 C 59 59 59 C C Q . n B 1 60 G 60 60 60 G G Q . n B 1 61 A 61 61 61 A A Q . n B 1 62 A 62 62 62 A A Q . n B 1 63 A 63 63 63 A A Q . n B 1 64 G 64 64 64 G G Q . n B 1 65 G 65 65 65 G G Q . n B 1 66 A 66 66 66 A A Q . n B 1 67 G 67 67 67 G G Q . n B 1 68 C 68 68 68 C C Q . n B 1 69 A 69 69 69 A A Q . n B 1 70 C 70 70 70 C C Q . n B 1 71 U 71 71 71 U U Q . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG 1 72 1 MG MG Q . D 2 MG 1 73 2 MG MG Q . E 2 MG 1 74 3 MG MG Q . F 2 MG 1 75 4 MG MG Q . G 2 MG 1 76 5 MG MG Q . H 2 MG 1 77 6 MG MG Q . I 2 MG 1 78 7 MG MG Q . J 3 HOH 1 72 4 HOH HOH P . J 3 HOH 2 73 5 HOH HOH P . J 3 HOH 3 74 10 HOH HOH P . J 3 HOH 4 75 12 HOH HOH P . J 3 HOH 5 76 14 HOH HOH P . J 3 HOH 6 77 16 HOH HOH P . J 3 HOH 7 78 18 HOH HOH P . J 3 HOH 8 79 20 HOH HOH P . J 3 HOH 9 80 22 HOH HOH P . J 3 HOH 10 81 24 HOH HOH P . K 3 HOH 1 79 2 HOH HOH Q . K 3 HOH 2 80 3 HOH HOH Q . K 3 HOH 3 81 6 HOH HOH Q . K 3 HOH 4 82 7 HOH HOH Q . K 3 HOH 5 83 8 HOH HOH Q . K 3 HOH 6 84 9 HOH HOH Q . K 3 HOH 7 85 11 HOH HOH Q . K 3 HOH 8 86 13 HOH HOH Q . K 3 HOH 9 87 15 HOH HOH Q . K 3 HOH 10 88 17 HOH HOH Q . K 3 HOH 11 89 19 HOH HOH Q . K 3 HOH 12 90 21 HOH HOH Q . K 3 HOH 13 91 23 HOH HOH Q . K 3 HOH 14 92 25 HOH HOH Q . K 3 HOH 15 93 26 HOH HOH Q . K 3 HOH 16 94 27 HOH HOH Q . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.3.0012 ? 1 Blu-Ice 'data collection' . ? 2 MOSFLM 'data reduction' . ? 3 CCP4 'data scaling' '(SCALA)' ? 4 PHASER phasing . ? 5 # _cell.entry_id 2OIU _cell.length_a 45.290 _cell.length_b 100.018 _cell.length_c 71.930 _cell.angle_alpha 90.00 _cell.angle_beta 104.42 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2OIU _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # _exptl.entry_id 2OIU _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.43 _exptl_crystal.density_percent_sol 64.12 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.pdbx_details ;1.8M lithium sulfate, 10mM magnesium sulfate, 50mM sodium cacodylate (pH 6.0), 100mM sodium chloride, 60mM magnesium chloride, 30mM tris (pH 7.6), VAPOR DIFFUSION, HANGING DROP, temperature 298K ; _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 'lithium sulfate' ? ? ? 1 2 1 'magnesium sulfate' ? ? ? 1 3 1 'sodium cacodylate' ? ? ? 1 4 1 'sodium chloride' ? ? ? 1 5 1 'magnesium chloride' ? ? ? 1 6 1 tris ? ? ? 1 7 2 'lithium sulfate' ? ? ? 1 8 2 'magnesium sulfate' ? ? ? 1 9 2 'sodium cacodylate' ? ? ? 1 10 2 'sodium chloride' ? ? ? 1 11 2 'magnesium chloride' ? ? ? 1 12 2 tris ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2006-06-14 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9840 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SSRL BEAMLINE BL9-1' _diffrn_source.pdbx_synchrotron_site SSRL _diffrn_source.pdbx_synchrotron_beamline BL9-1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9840 # _reflns.entry_id 2OIU _reflns.observed_criterion_sigma_F 0.0 _reflns.observed_criterion_sigma_I 0.0 _reflns.d_resolution_high 2.6 _reflns.d_resolution_low 100 _reflns.number_all 19071 _reflns.number_obs 19071 _reflns.percent_possible_obs 99.5 _reflns.pdbx_Rmerge_I_obs 0.044 _reflns.pdbx_Rsym_value 0.056 _reflns.pdbx_netI_over_sigmaI 20.2 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 4.1 _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.60 _reflns_shell.d_res_low 2.74 _reflns_shell.percent_possible_all 99.9 _reflns_shell.Rmerge_I_obs 0.467 _reflns_shell.pdbx_Rsym_value 0.615 _reflns_shell.meanI_over_sigI_obs 2.5 _reflns_shell.pdbx_redundancy 4.1 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 2767 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 2OIU _refine.ls_number_reflns_obs 17100 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I 0.0 _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 31.34 _refine.ls_d_res_high 2.60 _refine.ls_percent_reflns_obs 99.42 _refine.ls_R_factor_obs 0.2065 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.20291 _refine.ls_R_factor_R_free 0.23776 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.2 _refine.ls_number_reflns_R_free 1949 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.951 _refine.correlation_coeff_Fo_to_Fc_free 0.936 _refine.B_iso_mean 75.023 _refine.aniso_B[1][1] -0.64 _refine.aniso_B[2][2] 0.50 _refine.aniso_B[3][3] 0.25 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.22 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.442 _refine.pdbx_overall_ESU_R_Free 0.273 _refine.overall_SU_ML 0.250 _refine.overall_SU_B 26.550 _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 2OIU _refine_analyze.Luzzati_coordinate_error_obs ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free 0.274 _refine_analyze.Luzzati_sigma_a_free 0.252 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 3054 _refine_hist.pdbx_number_atoms_ligand 7 _refine_hist.number_atoms_solvent 26 _refine_hist.number_atoms_total 3087 _refine_hist.d_res_high 2.60 _refine_hist.d_res_low 31.34 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.010 0.021 ? 3426 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.976 3.000 ? 5340 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_chiral_restr 0.085 0.200 ? 710 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.007 0.020 ? 1492 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.199 0.200 ? 1315 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.285 0.200 ? 2131 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.149 0.200 ? 103 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.155 0.200 ? 46 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.144 0.200 ? 5 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 1.120 3.000 ? 4916 'X-RAY DIFFRACTION' ? r_scangle_it 1.898 4.500 ? 5340 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.600 _refine_ls_shell.d_res_low 2.667 _refine_ls_shell.number_reflns_R_work 1261 _refine_ls_shell.R_factor_R_work 0.419 _refine_ls_shell.percent_reflns_obs 99.86 _refine_ls_shell.R_factor_R_free 0.414 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 163 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 1261 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 2OIU _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 2OIU _struct.title 'L1 Ribozyme Ligase circular adduct' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2OIU _struct_keywords.pdbx_keywords RNA _struct_keywords.text 'Ligase, ribozyme, in vitro selection, RNA, active site' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 2 ? H N N 2 ? I N N 2 ? J N N 3 ? K N N 3 ? # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 2OIU _struct_ref.pdbx_db_accession 2OIU _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2OIU P 1 ? 71 ? 2OIU 1 ? 71 ? 1 71 2 1 2OIU Q 1 ? 71 ? 2OIU 1 ? 71 ? 1 71 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 author_defined_assembly ? monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,J 2 1 B,C,D,E,F,G,H,I,K # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_biol.id _struct_biol.details _struct_biol.pdbx_parent_biol_id 1 ;There are two molecules (independent ribozymes) within a single asymmetric unit. They are in dramatically different conformations. Chain Q appears to have the contacts required for catalytic activity. Chain P appears to be in a relaxed or inactive state. ; ? 2 ? ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A G 1 P ? ? ? 1_555 A U 71 "O3'" ? ? P G 1 P U 71 1_555 ? ? ? ? ? ? ? 1.598 ? ? covale2 covale both ? B G 1 P ? ? ? 1_555 B U 71 "O3'" ? ? Q G 1 Q U 71 1_555 ? ? ? ? ? ? ? 1.593 ? ? metalc1 metalc ? ? B G 1 OP1 ? ? ? 1_555 C MG . MG ? ? Q G 1 Q MG 72 1_555 ? ? ? ? ? ? ? 2.216 ? ? metalc2 metalc ? ? B G 1 O6 ? ? ? 1_555 D MG . MG ? ? Q G 1 Q MG 73 1_555 ? ? ? ? ? ? ? 2.180 ? ? metalc3 metalc ? ? B G 11 O6 ? ? ? 1_555 F MG . MG ? ? Q G 11 Q MG 75 1_555 ? ? ? ? ? ? ? 2.933 ? ? metalc4 metalc ? ? B A 39 OP1 ? ? ? 1_555 C MG . MG ? ? Q A 39 Q MG 72 1_555 ? ? ? ? ? ? ? 2.197 ? ? metalc5 metalc ? ? B G 40 OP2 ? ? ? 1_555 C MG . MG ? ? Q G 40 Q MG 72 1_555 ? ? ? ? ? ? ? 2.197 ? ? metalc6 metalc ? ? B G 53 "O4'" ? ? ? 1_555 H MG . MG ? ? Q G 53 Q MG 77 1_555 ? ? ? ? ? ? ? 2.982 ? ? metalc7 metalc ? ? B G 53 O6 ? ? ? 1_555 I MG . MG ? ? Q G 53 Q MG 78 1_555 ? ? ? ? ? ? ? 2.654 ? ? metalc8 metalc ? ? B U 71 "O3'" ? ? ? 1_555 C MG . MG ? ? Q U 71 Q MG 72 1_555 ? ? ? ? ? ? ? 2.760 ? ? metalc9 metalc ? ? D MG . MG ? ? ? 1_555 K HOH . O ? ? Q MG 73 Q HOH 88 1_555 ? ? ? ? ? ? ? 3.139 ? ? metalc10 metalc ? ? E MG . MG ? ? ? 1_555 K HOH . O ? ? Q MG 74 Q HOH 91 1_555 ? ? ? ? ? ? ? 3.087 ? ? metalc11 metalc ? ? H MG . MG ? ? ? 1_555 K HOH . O ? ? Q MG 77 Q HOH 79 1_555 ? ? ? ? ? ? ? 2.886 ? ? metalc12 metalc ? ? I MG . MG ? ? ? 1_555 K HOH . O ? ? Q MG 78 Q HOH 83 1_555 ? ? ? ? ? ? ? 2.846 ? ? hydrog1 hydrog ? ? A G 1 N2 ? ? ? 1_555 A A 51 N7 ? ? P G 1 P A 51 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog2 hydrog ? ? A G 1 N3 ? ? ? 1_555 A A 51 N6 ? ? P G 1 P A 51 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog3 hydrog ? ? A G 2 N1 ? ? ? 1_555 A U 50 O2 ? ? P G 2 P U 50 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog4 hydrog ? ? A G 2 O6 ? ? ? 1_555 A U 50 N3 ? ? P G 2 P U 50 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog5 hydrog ? ? A A 3 N1 ? ? ? 1_555 A U 49 N3 ? ? P A 3 P U 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A A 3 N6 ? ? ? 1_555 A U 49 O4 ? ? P A 3 P U 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A C 4 N3 ? ? ? 1_555 A G 48 N1 ? ? P C 4 P G 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A C 4 N4 ? ? ? 1_555 A G 48 O6 ? ? P C 4 P G 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A C 4 O2 ? ? ? 1_555 A G 48 N2 ? ? P C 4 P G 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A C 5 N3 ? ? ? 1_555 A G 47 N1 ? ? P C 5 P G 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A C 5 N4 ? ? ? 1_555 A G 47 O6 ? ? P C 5 P G 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A C 5 O2 ? ? ? 1_555 A G 47 N2 ? ? P C 5 P G 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A U 6 N3 ? ? ? 1_555 A A 46 N1 ? ? P U 6 P A 46 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A U 6 O4 ? ? ? 1_555 A A 46 N6 ? ? P U 6 P A 46 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A C 7 N3 ? ? ? 1_555 A G 45 N1 ? ? P C 7 P G 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A C 7 N4 ? ? ? 1_555 A G 45 O6 ? ? P C 7 P G 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A C 7 O2 ? ? ? 1_555 A G 45 N2 ? ? P C 7 P G 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A G 8 N1 ? ? ? 1_555 A C 17 N3 ? ? P G 8 P C 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A G 8 N2 ? ? ? 1_555 A C 17 O2 ? ? P G 8 P C 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A G 8 O6 ? ? ? 1_555 A C 17 N4 ? ? P G 8 P C 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A G 9 N1 ? ? ? 1_555 A C 16 N3 ? ? P G 9 P C 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A G 9 N2 ? ? ? 1_555 A C 16 O2 ? ? P G 9 P C 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A G 9 O6 ? ? ? 1_555 A C 16 N4 ? ? P G 9 P C 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A C 10 N3 ? ? ? 1_555 A G 15 N1 ? ? P C 10 P G 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A C 10 N4 ? ? ? 1_555 A G 15 O6 ? ? P C 10 P G 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A C 10 O2 ? ? ? 1_555 A G 15 N2 ? ? P C 10 P G 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A G 11 N2 ? ? ? 1_555 A A 14 N7 ? ? P G 11 P A 14 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog28 hydrog ? ? A G 18 N1 ? ? ? 1_555 A C 42 N3 ? ? P G 18 P C 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A G 18 N2 ? ? ? 1_555 A C 42 O2 ? ? P G 18 P C 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A G 18 O6 ? ? ? 1_555 A C 42 N4 ? ? P G 18 P C 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A U 20 N3 ? ? ? 1_555 A A 41 N1 ? ? P U 20 P A 41 1_555 ? ? ? ? ? ? 'U-A PAIR' ? ? ? hydrog32 hydrog ? ? A C 21 N3 ? ? ? 1_555 A G 40 N1 ? ? P C 21 P G 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A C 21 N4 ? ? ? 1_555 A G 40 O6 ? ? P C 21 P G 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A C 21 O2 ? ? ? 1_555 A G 40 N2 ? ? P C 21 P G 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A G 22 N2 ? ? ? 1_555 A A 39 N7 ? ? P G 22 P A 39 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog36 hydrog ? ? A G 22 N3 ? ? ? 1_555 A A 39 N6 ? ? P G 22 P A 39 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog37 hydrog ? ? A A 23 N6 ? ? ? 1_555 A U 37 O2 ? ? P A 23 P U 37 1_555 ? ? ? ? ? ? 'A-U PAIR' ? ? ? hydrog38 hydrog ? ? A C 25 N4 ? ? ? 1_555 A C 36 O2 ? ? P C 25 P C 36 1_555 ? ? ? ? ? ? 'C-C MISPAIR' ? ? ? hydrog39 hydrog ? ? A A 26 N1 ? ? ? 1_555 A U 35 N3 ? ? P A 26 P U 35 1_555 ? ? ? ? ? ? 'A-U PAIR' ? ? ? hydrog40 hydrog ? ? A G 27 N1 ? ? ? 1_555 A C 34 N3 ? ? P G 27 P C 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A G 27 N2 ? ? ? 1_555 A C 34 O2 ? ? P G 27 P C 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A G 27 O6 ? ? ? 1_555 A C 34 N4 ? ? P G 27 P C 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A C 28 N3 ? ? ? 1_555 A G 33 N1 ? ? P C 28 P G 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A C 28 N4 ? ? ? 1_555 A G 33 O6 ? ? P C 28 P G 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? A C 28 O2 ? ? ? 1_555 A G 33 N2 ? ? P C 28 P G 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A G 29 N2 ? ? ? 1_555 A A 32 N7 ? ? P G 29 P A 32 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog47 hydrog ? ? A G 47 N2 ? ? ? 1_555 B A 61 N1 ? ? P G 47 Q A 61 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog48 hydrog ? ? A G 48 N2 ? ? ? 1_555 B A 63 N3 ? ? P G 48 Q A 63 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog49 hydrog ? ? A G 52 N1 ? ? ? 1_555 A U 71 O2 ? ? P G 52 P U 71 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog50 hydrog ? ? A G 52 O6 ? ? ? 1_555 A U 71 N3 ? ? P G 52 P U 71 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog51 hydrog ? ? A G 53 N1 ? ? ? 1_555 A C 70 N3 ? ? P G 53 P C 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? A G 53 N2 ? ? ? 1_555 A C 70 O2 ? ? P G 53 P C 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? A G 53 O6 ? ? ? 1_555 A C 70 N4 ? ? P G 53 P C 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? A U 54 N3 ? ? ? 1_555 A A 69 N1 ? ? P U 54 P A 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? A U 54 O4 ? ? ? 1_555 A A 69 N6 ? ? P U 54 P A 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? A G 55 N1 ? ? ? 1_555 A C 68 N3 ? ? P G 55 P C 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? A G 55 N2 ? ? ? 1_555 A C 68 O2 ? ? P G 55 P C 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? A G 55 O6 ? ? ? 1_555 A C 68 N4 ? ? P G 55 P C 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? A C 56 N3 ? ? ? 1_555 A G 67 N1 ? ? P C 56 P G 67 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? A C 56 N4 ? ? ? 1_555 A G 67 O6 ? ? P C 56 P G 67 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? A C 56 O2 ? ? ? 1_555 A G 67 N2 ? ? P C 56 P G 67 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? A U 57 N3 ? ? ? 1_555 A A 66 N1 ? ? P U 57 P A 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? A U 57 O4 ? ? ? 1_555 A A 66 N6 ? ? P U 57 P A 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? A C 58 N3 ? ? ? 1_555 A G 65 N1 ? ? P C 58 P G 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? A C 58 N4 ? ? ? 1_555 A G 65 O6 ? ? P C 58 P G 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? A C 58 O2 ? ? ? 1_555 A G 65 N2 ? ? P C 58 P G 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? A C 59 N3 ? ? ? 1_555 A G 64 N1 ? ? P C 59 P G 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? A C 59 N4 ? ? ? 1_555 A G 64 O6 ? ? P C 59 P G 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? A C 59 O2 ? ? ? 1_555 A G 64 N2 ? ? P C 59 P G 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? A G 60 N2 ? ? ? 1_555 A A 63 N7 ? ? P G 60 P A 63 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog71 hydrog ? ? A A 63 N3 ? ? ? 1_555 B G 48 N2 ? ? P A 63 Q G 48 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? hydrog72 hydrog ? ? B G 1 N2 ? ? ? 1_555 B A 51 N7 ? ? Q G 1 Q A 51 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog73 hydrog ? ? B G 1 N3 ? ? ? 1_555 B A 51 N6 ? ? Q G 1 Q A 51 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog74 hydrog ? ? B G 2 N1 ? ? ? 1_555 B U 50 O2 ? ? Q G 2 Q U 50 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog75 hydrog ? ? B G 2 O6 ? ? ? 1_555 B U 50 N3 ? ? Q G 2 Q U 50 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog76 hydrog ? ? B A 3 N1 ? ? ? 1_555 B U 49 N3 ? ? Q A 3 Q U 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog77 hydrog ? ? B A 3 N6 ? ? ? 1_555 B U 49 O4 ? ? Q A 3 Q U 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog78 hydrog ? ? B C 4 N3 ? ? ? 1_555 B G 48 N1 ? ? Q C 4 Q G 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog79 hydrog ? ? B C 4 N4 ? ? ? 1_555 B G 48 O6 ? ? Q C 4 Q G 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog80 hydrog ? ? B C 4 O2 ? ? ? 1_555 B G 48 N2 ? ? Q C 4 Q G 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog81 hydrog ? ? B C 5 N3 ? ? ? 1_555 B G 47 N1 ? ? Q C 5 Q G 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog82 hydrog ? ? B C 5 N4 ? ? ? 1_555 B G 47 O6 ? ? Q C 5 Q G 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog83 hydrog ? ? B C 5 O2 ? ? ? 1_555 B G 47 N2 ? ? Q C 5 Q G 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog84 hydrog ? ? B U 6 N3 ? ? ? 1_555 B A 46 N1 ? ? Q U 6 Q A 46 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog85 hydrog ? ? B U 6 O4 ? ? ? 1_555 B A 46 N6 ? ? Q U 6 Q A 46 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog86 hydrog ? ? B C 7 N3 ? ? ? 1_555 B G 45 N1 ? ? Q C 7 Q G 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog87 hydrog ? ? B C 7 N4 ? ? ? 1_555 B G 45 O6 ? ? Q C 7 Q G 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog88 hydrog ? ? B C 7 O2 ? ? ? 1_555 B G 45 N2 ? ? Q C 7 Q G 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog89 hydrog ? ? B G 8 N1 ? ? ? 1_555 B C 17 N3 ? ? Q G 8 Q C 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog90 hydrog ? ? B G 8 N2 ? ? ? 1_555 B C 17 O2 ? ? Q G 8 Q C 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog91 hydrog ? ? B G 8 O6 ? ? ? 1_555 B C 17 N4 ? ? Q G 8 Q C 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog92 hydrog ? ? B G 9 N1 ? ? ? 1_555 B C 16 N3 ? ? Q G 9 Q C 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog93 hydrog ? ? B G 9 N2 ? ? ? 1_555 B C 16 O2 ? ? Q G 9 Q C 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog94 hydrog ? ? B G 9 O6 ? ? ? 1_555 B C 16 N4 ? ? Q G 9 Q C 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog95 hydrog ? ? B C 10 N3 ? ? ? 1_555 B G 15 N1 ? ? Q C 10 Q G 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog96 hydrog ? ? B C 10 N4 ? ? ? 1_555 B G 15 O6 ? ? Q C 10 Q G 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog97 hydrog ? ? B C 10 O2 ? ? ? 1_555 B G 15 N2 ? ? Q C 10 Q G 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog98 hydrog ? ? B G 11 N2 ? ? ? 1_555 B A 14 N7 ? ? Q G 11 Q A 14 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog99 hydrog ? ? B G 18 N1 ? ? ? 1_555 B C 42 N3 ? ? Q G 18 Q C 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog100 hydrog ? ? B G 18 N2 ? ? ? 1_555 B C 42 O2 ? ? Q G 18 Q C 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog101 hydrog ? ? B G 18 O6 ? ? ? 1_555 B C 42 N4 ? ? Q G 18 Q C 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog102 hydrog ? ? B U 20 N3 ? ? ? 1_555 B A 41 N1 ? ? Q U 20 Q A 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog103 hydrog ? ? B U 20 O4 ? ? ? 1_555 B A 41 N6 ? ? Q U 20 Q A 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog104 hydrog ? ? B C 21 N3 ? ? ? 1_555 B G 40 N1 ? ? Q C 21 Q G 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog105 hydrog ? ? B C 21 N4 ? ? ? 1_555 B G 40 O6 ? ? Q C 21 Q G 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog106 hydrog ? ? B C 21 O2 ? ? ? 1_555 B G 40 N2 ? ? Q C 21 Q G 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog107 hydrog ? ? B G 22 N2 ? ? ? 1_555 B A 39 N7 ? ? Q G 22 Q A 39 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog108 hydrog ? ? B G 22 N3 ? ? ? 1_555 B A 39 N6 ? ? Q G 22 Q A 39 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog109 hydrog ? ? B A 23 N6 ? ? ? 1_555 B U 37 O2 ? ? Q A 23 Q U 37 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog110 hydrog ? ? B A 23 N7 ? ? ? 1_555 B U 37 N3 ? ? Q A 23 Q U 37 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog111 hydrog ? ? B C 25 N4 ? ? ? 1_555 B C 36 O2 ? ? Q C 25 Q C 36 1_555 ? ? ? ? ? ? 'C-C MISPAIR' ? ? ? hydrog112 hydrog ? ? B A 26 N1 ? ? ? 1_555 B U 35 N3 ? ? Q A 26 Q U 35 1_555 ? ? ? ? ? ? 'A-U PAIR' ? ? ? hydrog113 hydrog ? ? B G 27 N1 ? ? ? 1_555 B C 34 N3 ? ? Q G 27 Q C 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog114 hydrog ? ? B G 27 N2 ? ? ? 1_555 B C 34 O2 ? ? Q G 27 Q C 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog115 hydrog ? ? B G 27 O6 ? ? ? 1_555 B C 34 N4 ? ? Q G 27 Q C 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog116 hydrog ? ? B C 28 N3 ? ? ? 1_555 B G 33 N1 ? ? Q C 28 Q G 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog117 hydrog ? ? B C 28 N4 ? ? ? 1_555 B G 33 O6 ? ? Q C 28 Q G 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog118 hydrog ? ? B C 28 O2 ? ? ? 1_555 B G 33 N2 ? ? Q C 28 Q G 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog119 hydrog ? ? B G 29 N2 ? ? ? 1_555 B G 33 O6 ? ? Q G 29 Q G 33 1_555 ? ? ? ? ? ? 'G-G MISPAIR' ? ? ? hydrog120 hydrog ? ? B U 38 N3 ? ? ? 1_555 B A 51 N1 ? ? Q U 38 Q A 51 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ? hydrog121 hydrog ? ? B U 38 O2 ? ? ? 1_555 B A 51 N6 ? ? Q U 38 Q A 51 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ? hydrog122 hydrog ? ? B G 52 N1 ? ? ? 1_555 B U 71 O2 ? ? Q G 52 Q U 71 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog123 hydrog ? ? B G 52 O6 ? ? ? 1_555 B U 71 N3 ? ? Q G 52 Q U 71 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog124 hydrog ? ? B G 53 N1 ? ? ? 1_555 B C 70 N3 ? ? Q G 53 Q C 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog125 hydrog ? ? B G 53 N2 ? ? ? 1_555 B C 70 O2 ? ? Q G 53 Q C 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog126 hydrog ? ? B G 53 O6 ? ? ? 1_555 B C 70 N4 ? ? Q G 53 Q C 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog127 hydrog ? ? B U 54 N3 ? ? ? 1_555 B A 69 N1 ? ? Q U 54 Q A 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog128 hydrog ? ? B U 54 O4 ? ? ? 1_555 B A 69 N6 ? ? Q U 54 Q A 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog129 hydrog ? ? B G 55 N1 ? ? ? 1_555 B C 68 N3 ? ? Q G 55 Q C 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog130 hydrog ? ? B G 55 N2 ? ? ? 1_555 B C 68 O2 ? ? Q G 55 Q C 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog131 hydrog ? ? B G 55 O6 ? ? ? 1_555 B C 68 N4 ? ? Q G 55 Q C 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog132 hydrog ? ? B C 56 N3 ? ? ? 1_555 B G 67 N1 ? ? Q C 56 Q G 67 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog133 hydrog ? ? B C 56 N4 ? ? ? 1_555 B G 67 O6 ? ? Q C 56 Q G 67 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog134 hydrog ? ? B C 56 O2 ? ? ? 1_555 B G 67 N2 ? ? Q C 56 Q G 67 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog135 hydrog ? ? B U 57 N3 ? ? ? 1_555 B A 66 N1 ? ? Q U 57 Q A 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog136 hydrog ? ? B U 57 O4 ? ? ? 1_555 B A 66 N6 ? ? Q U 57 Q A 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog137 hydrog ? ? B C 58 N3 ? ? ? 1_555 B G 65 N1 ? ? Q C 58 Q G 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog138 hydrog ? ? B C 58 N4 ? ? ? 1_555 B G 65 O6 ? ? Q C 58 Q G 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog139 hydrog ? ? B C 58 O2 ? ? ? 1_555 B G 65 N2 ? ? Q C 58 Q G 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog140 hydrog ? ? B C 59 N3 ? ? ? 1_555 B G 64 N1 ? ? Q C 59 Q G 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog141 hydrog ? ? B C 59 N4 ? ? ? 1_555 B G 64 O6 ? ? Q C 59 Q G 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog142 hydrog ? ? B C 59 O2 ? ? ? 1_555 B G 64 N2 ? ? Q C 59 Q G 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog143 hydrog ? ? B G 60 N2 ? ? ? 1_555 B A 63 N7 ? ? Q G 60 Q A 63 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OP1 ? B G 1 ? Q G 1 ? 1_555 MG ? C MG . ? Q MG 72 ? 1_555 OP1 ? B A 39 ? Q A 39 ? 1_555 84.5 ? 2 OP1 ? B G 1 ? Q G 1 ? 1_555 MG ? C MG . ? Q MG 72 ? 1_555 OP2 ? B G 40 ? Q G 40 ? 1_555 152.6 ? 3 OP1 ? B A 39 ? Q A 39 ? 1_555 MG ? C MG . ? Q MG 72 ? 1_555 OP2 ? B G 40 ? Q G 40 ? 1_555 89.5 ? 4 OP1 ? B G 1 ? Q G 1 ? 1_555 MG ? C MG . ? Q MG 72 ? 1_555 "O3'" ? B U 71 ? Q U 71 ? 1_555 56.9 ? 5 OP1 ? B A 39 ? Q A 39 ? 1_555 MG ? C MG . ? Q MG 72 ? 1_555 "O3'" ? B U 71 ? Q U 71 ? 1_555 69.7 ? 6 OP2 ? B G 40 ? Q G 40 ? 1_555 MG ? C MG . ? Q MG 72 ? 1_555 "O3'" ? B U 71 ? Q U 71 ? 1_555 96.0 ? 7 O6 ? B G 1 ? Q G 1 ? 1_555 MG ? D MG . ? Q MG 73 ? 1_555 O ? K HOH . ? Q HOH 88 ? 1_555 80.9 ? 8 "O4'" ? B G 53 ? Q G 53 ? 1_555 MG ? H MG . ? Q MG 77 ? 1_555 O ? K HOH . ? Q HOH 79 ? 1_555 108.8 ? 9 O6 ? B G 53 ? Q G 53 ? 1_555 MG ? I MG . ? Q MG 78 ? 1_555 O ? K HOH . ? Q HOH 83 ? 1_555 82.8 ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software Q MG 72 ? 4 'BINDING SITE FOR RESIDUE MG Q 72' AC2 Software Q MG 73 ? 1 'BINDING SITE FOR RESIDUE MG Q 73' AC3 Software Q MG 74 ? 3 'BINDING SITE FOR RESIDUE MG Q 74' AC4 Software Q MG 75 ? 1 'BINDING SITE FOR RESIDUE MG Q 75' AC5 Software Q MG 77 ? 3 'BINDING SITE FOR RESIDUE MG Q 77' AC6 Software Q MG 78 ? 3 'BINDING SITE FOR RESIDUE MG Q 78' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 G B 1 ? G Q 1 . ? 1_555 ? 2 AC1 4 A B 39 ? A Q 39 . ? 1_555 ? 3 AC1 4 G B 40 ? G Q 40 . ? 1_555 ? 4 AC1 4 U B 71 ? U Q 71 . ? 1_555 ? 5 AC2 1 G B 1 ? G Q 1 . ? 1_555 ? 6 AC3 3 G B 1 ? G Q 1 . ? 1_555 ? 7 AC3 3 U B 50 ? U Q 50 . ? 1_555 ? 8 AC3 3 HOH K . ? HOH Q 91 . ? 1_555 ? 9 AC4 1 G B 11 ? G Q 11 . ? 1_555 ? 10 AC5 3 G B 52 ? G Q 52 . ? 1_555 ? 11 AC5 3 G B 53 ? G Q 53 . ? 1_555 ? 12 AC5 3 HOH K . ? HOH Q 79 . ? 1_555 ? 13 AC6 3 G B 52 ? G Q 52 . ? 1_555 ? 14 AC6 3 G B 53 ? G Q 53 . ? 1_555 ? 15 AC6 3 HOH K . ? HOH Q 83 . ? 1_555 ? # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 "O5'" _pdbx_validate_rmsd_bond.auth_asym_id_1 P _pdbx_validate_rmsd_bond.auth_comp_id_1 A _pdbx_validate_rmsd_bond.auth_seq_id_1 41 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 "C5'" _pdbx_validate_rmsd_bond.auth_asym_id_2 P _pdbx_validate_rmsd_bond.auth_comp_id_2 A _pdbx_validate_rmsd_bond.auth_seq_id_2 41 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.366 _pdbx_validate_rmsd_bond.bond_target_value 1.420 _pdbx_validate_rmsd_bond.bond_deviation -0.054 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.009 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" P C 5 ? ? "C1'" P C 5 ? ? N1 P C 5 ? ? 112.98 108.50 4.48 0.70 N 2 1 "C5'" P A 13 ? ? "C4'" P A 13 ? ? "C3'" P A 13 ? ? 105.81 115.20 -9.39 1.40 N 3 1 "C5'" P A 13 ? ? "C4'" P A 13 ? ? "O4'" P A 13 ? ? 118.95 109.80 9.15 0.90 N 4 1 "O4'" P A 13 ? ? "C1'" P A 13 ? ? N9 P A 13 ? ? 113.12 108.50 4.62 0.70 N 5 1 C8 P A 13 ? ? N9 P A 13 ? ? C4 P A 13 ? ? 102.79 105.80 -3.01 0.40 N 6 1 "O4'" P G 18 ? ? "C1'" P G 18 ? ? N9 P G 18 ? ? 116.11 108.50 7.61 0.70 N 7 1 "C3'" P G 18 ? ? "O3'" P G 18 ? ? P P U 19 ? ? 129.61 119.70 9.91 1.20 Y 8 1 "C1'" P U 19 ? ? "O4'" P U 19 ? ? "C4'" P U 19 ? ? 104.70 109.70 -5.00 0.70 N 9 1 "O4'" P C 21 ? ? "C1'" P C 21 ? ? N1 P C 21 ? ? 114.05 108.50 5.55 0.70 N 10 1 "O4'" P C 24 ? ? "C4'" P C 24 ? ? "C3'" P C 24 ? ? 97.06 104.00 -6.94 1.00 N 11 1 "O4'" P C 28 ? ? "C1'" P C 28 ? ? N1 P C 28 ? ? 113.53 108.50 5.03 0.70 N 12 1 "O4'" P G 29 ? ? "C1'" P G 29 ? ? N9 P G 29 ? ? 113.26 108.50 4.76 0.70 N 13 1 "O4'" P G 48 ? ? "C1'" P G 48 ? ? N9 P G 48 ? ? 113.17 108.50 4.67 0.70 N 14 1 "O4'" P C 59 ? ? "C1'" P C 59 ? ? N1 P C 59 ? ? 113.64 108.50 5.14 0.70 N 15 1 "O4'" P G 60 ? ? "C1'" P G 60 ? ? N9 P G 60 ? ? 113.82 108.50 5.32 0.70 N 16 1 "C4'" P A 66 ? ? "C3'" P A 66 ? ? "C2'" P A 66 ? ? 96.23 102.60 -6.37 1.00 N 17 1 "C4'" P C 68 ? ? "C3'" P C 68 ? ? "C2'" P C 68 ? ? 95.90 102.60 -6.70 1.00 N 18 1 "O4'" P C 68 ? ? "C1'" P C 68 ? ? N1 P C 68 ? ? 113.30 108.50 4.80 0.70 N 19 1 N3 P C 68 ? ? C4 P C 68 ? ? N4 P C 68 ? ? 113.77 118.00 -4.23 0.70 N 20 1 "C4'" Q C 4 ? ? "C3'" Q C 4 ? ? "C2'" Q C 4 ? ? 96.56 102.60 -6.04 1.00 N 21 1 "O4'" Q C 5 ? ? "C1'" Q C 5 ? ? N1 Q C 5 ? ? 112.76 108.50 4.26 0.70 N 22 1 N9 Q G 11 ? ? "C1'" Q G 11 ? ? "C2'" Q G 11 ? ? 102.85 112.00 -9.15 1.10 N 23 1 C5 Q G 11 ? ? C6 Q G 11 ? ? N1 Q G 11 ? ? 115.00 111.50 3.50 0.50 N 24 1 "O4'" Q A 26 ? ? "C1'" Q A 26 ? ? N9 Q A 26 ? ? 112.97 108.50 4.47 0.70 N 25 1 "C3'" Q G 33 ? ? "C2'" Q G 33 ? ? "C1'" Q G 33 ? ? 96.14 101.30 -5.16 0.70 N 26 1 "O4'" Q G 33 ? ? "C1'" Q G 33 ? ? N9 Q G 33 ? ? 113.88 108.50 5.38 0.70 N 27 1 "C3'" Q C 34 ? ? "C2'" Q C 34 ? ? "C1'" Q C 34 ? ? 96.70 101.30 -4.60 0.70 N 28 1 "O4'" Q C 36 ? ? "C1'" Q C 36 ? ? N1 Q C 36 ? ? 113.63 108.50 5.13 0.70 N 29 1 "O4'" Q A 41 ? ? "C4'" Q A 41 ? ? "C3'" Q A 41 ? ? 96.94 104.00 -7.06 1.00 N 30 1 "C1'" Q G 44 ? ? "O4'" Q G 44 ? ? "C4'" Q G 44 ? ? 100.59 109.70 -9.11 0.70 N 31 1 "C4'" Q G 47 ? ? "C3'" Q G 47 ? ? "C2'" Q G 47 ? ? 95.80 102.60 -6.80 1.00 N 32 1 "O4'" Q G 47 ? ? "C1'" Q G 47 ? ? N9 Q G 47 ? ? 113.97 108.50 5.47 0.70 N 33 1 "C5'" Q G 48 ? ? "C4'" Q G 48 ? ? "C3'" Q G 48 ? ? 106.77 115.20 -8.43 1.40 N 34 1 "O4'" Q A 51 ? ? "C1'" Q A 51 ? ? N9 Q A 51 ? ? 113.20 108.50 4.70 0.70 N 35 1 "O4'" Q G 55 ? ? "C1'" Q G 55 ? ? N9 Q G 55 ? ? 114.67 108.50 6.17 0.70 N 36 1 "O4'" Q G 60 ? ? "C1'" Q G 60 ? ? N9 Q G 60 ? ? 113.27 108.50 4.77 0.70 N 37 1 "O4'" Q C 68 ? ? "C1'" Q C 68 ? ? N1 Q C 68 ? ? 112.87 108.50 4.37 0.70 N 38 1 "O4'" Q U 71 ? ? "C1'" Q U 71 ? ? N1 Q U 71 ? ? 112.81 108.50 4.31 0.70 N # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.pdbx_refine_id 1 ? refined -11.6988 -18.7686 -14.6850 -0.1839 -0.0137 0.0216 -0.0162 -0.1178 -0.0719 0.1727 1.0111 2.2735 0.1593 -0.1917 1.1576 0.0513 -0.1033 0.0523 0.0362 0.1242 -0.3473 0.0552 0.6578 -0.1755 'X-RAY DIFFRACTION' 2 ? refined -34.8841 -34.3495 -0.6643 0.0527 0.3332 0.9938 -0.0267 0.1650 0.0807 17.3733 4.3371 4.8229 0.5396 -5.6512 3.4154 -0.2998 -2.0486 0.1093 0.6816 0.2945 0.8794 0.1416 0.8308 0.0053 'X-RAY DIFFRACTION' 3 ? refined -16.8108 -1.7912 -42.1464 -0.1444 -0.1206 -0.1235 -0.1035 0.0577 0.0668 1.2865 1.1484 2.7274 -0.7932 -0.6488 0.7212 0.0050 0.2129 0.0700 0.1369 0.1008 0.2737 -0.1156 -0.7531 -0.1058 'X-RAY DIFFRACTION' 4 ? refined 0.3154 16.1801 -45.6234 0.0067 -0.0424 0.5646 -0.0550 0.0864 -0.0800 6.0891 12.1058 12.5043 -0.9332 3.8016 0.6822 -0.4803 0.5625 0.9037 -0.3842 0.5220 -2.9718 -0.5134 2.5001 -0.0417 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 P 1 A 1 P 18 A 18 ? 'X-RAY DIFFRACTION' ? 2 1 P 42 A 42 P 71 A 71 ? 'X-RAY DIFFRACTION' ? 3 2 P 20 A 20 P 41 A 41 ? 'X-RAY DIFFRACTION' ? 4 3 Q 1 B 1 Q 18 B 18 ? 'X-RAY DIFFRACTION' ? 5 3 Q 42 B 42 Q 71 B 71 ? 'X-RAY DIFFRACTION' ? 6 4 Q 20 B 20 Q 41 B 41 ? 'X-RAY DIFFRACTION' ? # _pdbx_database_remark.id 400 _pdbx_database_remark.text ;COMPOUND CHAIN Q APPEARS TO HAVE THE CONTACTS REQUIRED FOR CATALYTIC ACTIVITY. CHAIN P APPEARS TO BE IN A RELAXED OR INACTIVE STATE. ; # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 C OP3 O N N 38 C P P N N 39 C OP1 O N N 40 C OP2 O N N 41 C "O5'" O N N 42 C "C5'" C N N 43 C "C4'" C N R 44 C "O4'" O N N 45 C "C3'" C N S 46 C "O3'" O N N 47 C "C2'" C N R 48 C "O2'" O N N 49 C "C1'" C N R 50 C N1 N N N 51 C C2 C N N 52 C O2 O N N 53 C N3 N N N 54 C C4 C N N 55 C N4 N N N 56 C C5 C N N 57 C C6 C N N 58 C HOP3 H N N 59 C HOP2 H N N 60 C "H5'" H N N 61 C "H5''" H N N 62 C "H4'" H N N 63 C "H3'" H N N 64 C "HO3'" H N N 65 C "H2'" H N N 66 C "HO2'" H N N 67 C "H1'" H N N 68 C H41 H N N 69 C H42 H N N 70 C H5 H N N 71 C H6 H N N 72 G OP3 O N N 73 G P P N N 74 G OP1 O N N 75 G OP2 O N N 76 G "O5'" O N N 77 G "C5'" C N N 78 G "C4'" C N R 79 G "O4'" O N N 80 G "C3'" C N S 81 G "O3'" O N N 82 G "C2'" C N R 83 G "O2'" O N N 84 G "C1'" C N R 85 G N9 N Y N 86 G C8 C Y N 87 G N7 N Y N 88 G C5 C Y N 89 G C6 C N N 90 G O6 O N N 91 G N1 N N N 92 G C2 C N N 93 G N2 N N N 94 G N3 N N N 95 G C4 C Y N 96 G HOP3 H N N 97 G HOP2 H N N 98 G "H5'" H N N 99 G "H5''" H N N 100 G "H4'" H N N 101 G "H3'" H N N 102 G "HO3'" H N N 103 G "H2'" H N N 104 G "HO2'" H N N 105 G "H1'" H N N 106 G H8 H N N 107 G H1 H N N 108 G H21 H N N 109 G H22 H N N 110 HOH O O N N 111 HOH H1 H N N 112 HOH H2 H N N 113 MG MG MG N N 114 U OP3 O N N 115 U P P N N 116 U OP1 O N N 117 U OP2 O N N 118 U "O5'" O N N 119 U "C5'" C N N 120 U "C4'" C N R 121 U "O4'" O N N 122 U "C3'" C N S 123 U "O3'" O N N 124 U "C2'" C N R 125 U "O2'" O N N 126 U "C1'" C N R 127 U N1 N N N 128 U C2 C N N 129 U O2 O N N 130 U N3 N N N 131 U C4 C N N 132 U O4 O N N 133 U C5 C N N 134 U C6 C N N 135 U HOP3 H N N 136 U HOP2 H N N 137 U "H5'" H N N 138 U "H5''" H N N 139 U "H4'" H N N 140 U "H3'" H N N 141 U "HO3'" H N N 142 U "H2'" H N N 143 U "HO2'" H N N 144 U "H1'" H N N 145 U H3 H N N 146 U H5 H N N 147 U H6 H N N 148 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 C OP3 P sing N N 40 C OP3 HOP3 sing N N 41 C P OP1 doub N N 42 C P OP2 sing N N 43 C P "O5'" sing N N 44 C OP2 HOP2 sing N N 45 C "O5'" "C5'" sing N N 46 C "C5'" "C4'" sing N N 47 C "C5'" "H5'" sing N N 48 C "C5'" "H5''" sing N N 49 C "C4'" "O4'" sing N N 50 C "C4'" "C3'" sing N N 51 C "C4'" "H4'" sing N N 52 C "O4'" "C1'" sing N N 53 C "C3'" "O3'" sing N N 54 C "C3'" "C2'" sing N N 55 C "C3'" "H3'" sing N N 56 C "O3'" "HO3'" sing N N 57 C "C2'" "O2'" sing N N 58 C "C2'" "C1'" sing N N 59 C "C2'" "H2'" sing N N 60 C "O2'" "HO2'" sing N N 61 C "C1'" N1 sing N N 62 C "C1'" "H1'" sing N N 63 C N1 C2 sing N N 64 C N1 C6 sing N N 65 C C2 O2 doub N N 66 C C2 N3 sing N N 67 C N3 C4 doub N N 68 C C4 N4 sing N N 69 C C4 C5 sing N N 70 C N4 H41 sing N N 71 C N4 H42 sing N N 72 C C5 C6 doub N N 73 C C5 H5 sing N N 74 C C6 H6 sing N N 75 G OP3 P sing N N 76 G OP3 HOP3 sing N N 77 G P OP1 doub N N 78 G P OP2 sing N N 79 G P "O5'" sing N N 80 G OP2 HOP2 sing N N 81 G "O5'" "C5'" sing N N 82 G "C5'" "C4'" sing N N 83 G "C5'" "H5'" sing N N 84 G "C5'" "H5''" sing N N 85 G "C4'" "O4'" sing N N 86 G "C4'" "C3'" sing N N 87 G "C4'" "H4'" sing N N 88 G "O4'" "C1'" sing N N 89 G "C3'" "O3'" sing N N 90 G "C3'" "C2'" sing N N 91 G "C3'" "H3'" sing N N 92 G "O3'" "HO3'" sing N N 93 G "C2'" "O2'" sing N N 94 G "C2'" "C1'" sing N N 95 G "C2'" "H2'" sing N N 96 G "O2'" "HO2'" sing N N 97 G "C1'" N9 sing N N 98 G "C1'" "H1'" sing N N 99 G N9 C8 sing Y N 100 G N9 C4 sing Y N 101 G C8 N7 doub Y N 102 G C8 H8 sing N N 103 G N7 C5 sing Y N 104 G C5 C6 sing N N 105 G C5 C4 doub Y N 106 G C6 O6 doub N N 107 G C6 N1 sing N N 108 G N1 C2 sing N N 109 G N1 H1 sing N N 110 G C2 N2 sing N N 111 G C2 N3 doub N N 112 G N2 H21 sing N N 113 G N2 H22 sing N N 114 G N3 C4 sing N N 115 HOH O H1 sing N N 116 HOH O H2 sing N N 117 U OP3 P sing N N 118 U OP3 HOP3 sing N N 119 U P OP1 doub N N 120 U P OP2 sing N N 121 U P "O5'" sing N N 122 U OP2 HOP2 sing N N 123 U "O5'" "C5'" sing N N 124 U "C5'" "C4'" sing N N 125 U "C5'" "H5'" sing N N 126 U "C5'" "H5''" sing N N 127 U "C4'" "O4'" sing N N 128 U "C4'" "C3'" sing N N 129 U "C4'" "H4'" sing N N 130 U "O4'" "C1'" sing N N 131 U "C3'" "O3'" sing N N 132 U "C3'" "C2'" sing N N 133 U "C3'" "H3'" sing N N 134 U "O3'" "HO3'" sing N N 135 U "C2'" "O2'" sing N N 136 U "C2'" "C1'" sing N N 137 U "C2'" "H2'" sing N N 138 U "O2'" "HO2'" sing N N 139 U "C1'" N1 sing N N 140 U "C1'" "H1'" sing N N 141 U N1 C2 sing N N 142 U N1 C6 sing N N 143 U C2 O2 doub N N 144 U C2 N3 sing N N 145 U N3 C4 sing N N 146 U N3 H3 sing N N 147 U C4 O4 doub N N 148 U C4 C5 sing N N 149 U C5 C6 doub N N 150 U C5 H5 sing N N 151 U C6 H6 sing N N 152 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 2OIU 'double helix' 2OIU 'a-form double helix' 2OIU 'hairpin loop' 2OIU tetraloop 2OIU 'bulge loop' 2OIU 'mismatched base pair' 2OIU 'internal loop' 2OIU 'three-way junction' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A A 14 1_555 A G 11 1_555 -6.956 -4.870 0.523 -18.900 2.436 -9.700 1 P_A14:G11_P P 14 ? P 11 ? ? ? 1 A G 15 1_555 A C 10 1_555 -0.337 -0.331 0.107 3.146 2.932 1.925 2 P_G15:C10_P P 15 ? P 10 ? 19 1 1 A C 16 1_555 A G 9 1_555 -0.028 -0.108 -0.061 8.286 -8.610 -1.418 3 P_C16:G9_P P 16 ? P 9 ? 19 1 1 A C 17 1_555 A G 8 1_555 0.512 -0.142 -0.353 10.326 -5.764 2.974 4 P_C17:G8_P P 17 ? P 8 ? 19 1 1 A G 45 1_555 A C 7 1_555 -0.281 -0.257 0.028 3.003 9.631 0.127 5 P_G45:C7_P P 45 ? P 7 ? 19 1 1 A A 46 1_555 A U 6 1_555 0.013 -0.064 -0.237 1.483 -8.018 6.070 6 P_A46:U6_P P 46 ? P 6 ? 20 1 1 A G 47 1_555 A C 5 1_555 -0.574 -0.180 -0.604 -14.205 -13.952 3.167 7 P_G47:C5_P P 47 ? P 5 ? 19 1 1 A G 48 1_555 A C 4 1_555 0.219 -0.076 -0.474 -15.454 -5.422 1.346 8 P_G48:C4_P P 48 ? P 4 ? 19 1 1 A U 49 1_555 A A 3 1_555 -0.023 0.040 -0.136 -1.896 -0.213 6.818 9 P_U49:A3_P P 49 ? P 3 ? 20 1 1 A U 50 1_555 A G 2 1_555 2.419 -0.581 -0.471 6.448 -5.864 1.888 10 P_U50:G2_P P 50 ? P 2 ? 28 ? 1 A A 51 1_555 A G 1 1_555 -6.941 -3.450 0.023 9.784 -17.008 2.526 11 P_A51:G1_P P 51 ? P 1 ? 11 9 1 A G 52 1_555 A U 71 1_555 -2.372 -0.551 0.165 5.674 -17.261 5.113 12 P_G52:U71_P P 52 ? P 71 ? 28 1 1 A G 53 1_555 A C 70 1_555 -0.344 -0.169 0.172 -4.999 -16.735 1.769 13 P_G53:C70_P P 53 ? P 70 ? 19 1 1 A U 54 1_555 A A 69 1_555 0.334 -0.056 0.282 1.507 -10.229 6.153 14 P_U54:A69_P P 54 ? P 69 ? 20 1 1 A G 55 1_555 A C 68 1_555 -0.042 -0.129 0.426 3.996 -17.068 2.309 15 P_G55:C68_P P 55 ? P 68 ? 19 1 1 A C 56 1_555 A G 67 1_555 0.327 -0.064 0.016 5.512 -12.556 1.517 16 P_C56:G67_P P 56 ? P 67 ? 19 1 1 A U 57 1_555 A A 66 1_555 0.401 -0.168 0.059 8.219 -8.269 6.403 17 P_U57:A66_P P 57 ? P 66 ? 20 1 1 A C 58 1_555 A G 65 1_555 0.505 -0.204 -0.300 6.515 -8.372 3.051 18 P_C58:G65_P P 58 ? P 65 ? 19 1 1 A C 59 1_555 A G 64 1_555 0.275 -0.209 -0.160 5.835 0.440 -1.944 19 P_C59:G64_P P 59 ? P 64 ? 19 1 1 A G 18 1_555 A C 42 1_555 -0.438 -0.240 -0.392 -8.684 -12.014 1.384 20 P_G18:C42_P P 18 ? P 42 ? 19 1 1 A U 20 1_555 A A 41 1_555 0.758 0.284 0.322 -6.840 -9.757 13.953 21 P_U20:A41_P P 20 ? P 41 ? ? 1 1 A C 21 1_555 A G 40 1_555 0.706 -0.221 0.018 0.938 -12.813 -1.831 22 P_C21:G40_P P 21 ? P 40 ? 19 1 1 A G 22 1_555 A A 39 1_555 6.882 -4.460 0.309 -0.866 -12.367 1.399 23 P_G22:A39_P P 22 ? P 39 ? 11 10 1 A A 23 1_555 A U 37 1_555 -6.294 -3.843 0.117 4.486 7.566 -49.170 24 P_A23:U37_P P 23 ? P 37 ? ? ? 1 A C 25 1_555 A C 36 1_555 -4.143 -2.307 1.550 15.126 5.189 9.974 25 P_C25:C36_P P 25 ? P 36 ? ? 1 1 A A 26 1_555 A U 35 1_555 -0.821 0.458 0.380 2.883 -13.385 22.138 26 P_A26:U35_P P 26 ? P 35 ? ? 1 1 A G 27 1_555 A C 34 1_555 -0.520 -0.099 0.302 1.157 -5.394 8.574 27 P_G27:C34_P P 27 ? P 34 ? 19 1 1 A C 28 1_555 A G 33 1_555 -0.251 -0.059 -0.254 -0.017 2.974 1.696 28 P_C28:G33_P P 28 ? P 33 ? 19 1 1 A G 29 1_555 A A 32 1_555 6.923 -6.035 0.821 14.636 0.045 -19.817 29 P_G29:A32_P P 29 ? P 32 ? ? ? 1 B A 14 1_555 B G 11 1_555 -6.728 -5.158 0.644 -14.054 7.052 -10.335 30 Q_A14:G11_Q Q 14 ? Q 11 ? ? ? 1 B G 15 1_555 B C 10 1_555 -0.489 -0.322 0.043 0.443 4.071 0.940 31 Q_G15:C10_Q Q 15 ? Q 10 ? 19 1 1 B C 16 1_555 B G 9 1_555 0.119 -0.163 -0.103 1.493 -3.547 -1.206 32 Q_C16:G9_Q Q 16 ? Q 9 ? 19 1 1 B C 17 1_555 B G 8 1_555 -0.010 -0.385 -0.493 14.518 6.703 -5.416 33 Q_C17:G8_Q Q 17 ? Q 8 ? 19 1 1 B G 45 1_555 B C 7 1_555 0.065 -0.046 -0.091 -13.135 -9.185 1.121 34 Q_G45:C7_Q Q 45 ? Q 7 ? 19 1 1 B A 46 1_555 B U 6 1_555 0.190 -0.160 -0.011 1.743 -9.177 5.784 35 Q_A46:U6_Q Q 46 ? Q 6 ? 20 1 1 B G 47 1_555 B C 5 1_555 -0.253 -0.148 0.254 9.662 -7.331 0.552 36 Q_G47:C5_Q Q 47 ? Q 5 ? 19 1 1 B G 48 1_555 B C 4 1_555 -0.326 -0.245 -0.187 -8.713 -18.770 6.475 37 Q_G48:C4_Q Q 48 ? Q 4 ? 19 1 1 B U 49 1_555 B A 3 1_555 -0.191 -0.193 0.441 -12.292 -11.565 1.988 38 Q_U49:A3_Q Q 49 ? Q 3 ? 20 1 1 B U 50 1_555 B G 2 1_555 2.450 -0.685 0.034 -1.955 -12.938 -2.624 39 Q_U50:G2_Q Q 50 ? Q 2 ? 28 ? 1 B A 51 1_555 B U 38 1_555 0.152 1.091 -0.554 -5.622 -6.797 170.809 40 Q_A51:U38_Q Q 51 ? Q 38 ? 21 2 1 B G 52 1_555 B U 71 1_555 -2.478 -0.680 -0.097 0.302 -6.947 0.030 41 Q_G52:U71_Q Q 52 ? Q 71 ? 28 ? 1 B G 53 1_555 B C 70 1_555 -0.295 -0.387 -0.277 -5.303 -7.092 0.329 42 Q_G53:C70_Q Q 53 ? Q 70 ? 19 1 1 B U 54 1_555 B A 69 1_555 -0.090 -0.167 -0.212 -4.125 -7.800 1.244 43 Q_U54:A69_Q Q 54 ? Q 69 ? 20 1 1 B G 55 1_555 B C 68 1_555 -0.507 -0.190 0.025 -6.598 -12.861 -1.777 44 Q_G55:C68_Q Q 55 ? Q 68 ? 19 1 1 B C 56 1_555 B G 67 1_555 0.799 -0.205 -0.058 -0.218 -13.716 0.887 45 Q_C56:G67_Q Q 56 ? Q 67 ? 19 1 1 B U 57 1_555 B A 66 1_555 0.948 -0.311 -0.016 4.438 -15.894 7.170 46 Q_U57:A66_Q Q 57 ? Q 66 ? 20 1 1 B C 58 1_555 B G 65 1_555 0.295 -0.118 -0.364 8.019 -13.137 -1.028 47 Q_C58:G65_Q Q 58 ? Q 65 ? 19 1 1 B C 59 1_555 B G 64 1_555 0.499 -0.227 -0.474 5.578 0.518 -2.713 48 Q_C59:G64_Q Q 59 ? Q 64 ? 19 1 1 B G 60 1_555 B A 63 1_555 7.071 -5.279 0.517 7.604 3.182 -15.212 49 Q_G60:A63_Q Q 60 ? Q 63 ? ? 10 1 B G 18 1_555 B C 42 1_555 -0.364 -0.145 0.049 -15.797 -13.312 3.988 50 Q_G18:C42_Q Q 18 ? Q 42 ? 19 1 1 B U 20 1_555 B A 41 1_555 0.173 -0.275 0.273 -12.237 -9.373 0.547 51 Q_U20:A41_Q Q 20 ? Q 41 ? 20 1 1 B C 21 1_555 B G 40 1_555 0.305 -0.390 0.715 -10.621 -6.664 -3.515 52 Q_C21:G40_Q Q 21 ? Q 40 ? 19 1 1 B G 22 1_555 B A 39 1_555 6.823 -4.362 0.511 -1.808 -7.644 -5.673 53 Q_G22:A39_Q Q 22 ? Q 39 ? 11 10 1 B A 23 1_555 B U 37 1_555 -4.138 -2.071 -0.339 1.870 -3.627 -94.983 54 Q_A23:U37_Q Q 23 ? Q 37 ? 24 4 1 B C 25 1_555 B C 36 1_555 -3.808 -1.632 -0.197 14.946 -39.032 7.709 55 Q_C25:C36_Q Q 25 ? Q 36 ? ? 1 1 B A 26 1_555 B U 35 1_555 -0.923 0.059 0.024 -8.397 -19.359 14.096 56 Q_A26:U35_Q Q 26 ? Q 35 ? ? 1 1 B G 27 1_555 B C 34 1_555 -1.012 0.078 -0.455 -20.399 -24.486 0.996 57 Q_G27:C34_Q Q 27 ? Q 34 ? 19 1 1 B C 28 1_555 B G 33 1_555 0.703 -0.141 -0.869 -19.550 12.435 2.465 58 Q_C28:G33_Q Q 28 ? Q 33 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A A 14 1_555 A G 11 1_555 A G 15 1_555 A C 10 1_555 1.911 -0.880 2.726 1.012 3.179 48.012 -1.287 -2.277 2.703 3.902 -1.242 48.121 1 PP_A14G15:C10G11_PP P 14 ? P 11 ? P 15 ? P 10 ? 1 A G 15 1_555 A C 10 1_555 A C 16 1_555 A G 9 1_555 0.041 -2.059 3.082 0.670 2.453 29.828 -4.451 0.048 2.908 4.755 -1.299 29.933 2 PP_G15C16:G9C10_PP P 15 ? P 10 ? P 16 ? P 9 ? 1 A C 16 1_555 A G 9 1_555 A C 17 1_555 A G 8 1_555 0.752 -2.182 3.188 5.504 7.221 34.518 -4.534 -0.489 2.773 11.915 -9.083 35.657 3 PP_C16C17:G8G9_PP P 16 ? P 9 ? P 17 ? P 8 ? 1 A C 17 1_555 A G 8 1_555 A G 45 1_555 A C 7 1_555 1.879 -3.734 3.476 -7.735 -0.494 -4.552 25.375 -12.234 3.173 3.803 -59.500 -8.987 4 PP_C17G45:C7G8_PP P 17 ? P 8 ? P 45 ? P 7 ? 1 A G 45 1_555 A C 7 1_555 A A 46 1_555 A U 6 1_555 0.342 -2.383 3.324 1.040 7.277 28.778 -6.075 -0.465 2.665 14.348 -2.050 29.683 5 PP_G45A46:U6C7_PP P 45 ? P 7 ? P 46 ? P 6 ? 1 A A 46 1_555 A U 6 1_555 A G 47 1_555 A C 5 1_555 0.033 -2.645 3.699 2.413 11.634 25.794 -7.985 0.470 2.306 24.475 -5.076 28.357 6 PP_A46G47:C5U6_PP P 46 ? P 6 ? P 47 ? P 5 ? 1 A G 47 1_555 A C 5 1_555 A G 48 1_555 A C 4 1_555 -0.138 -2.343 3.379 0.747 8.802 30.067 -5.893 0.387 2.601 16.523 -1.403 31.308 7 PP_G47G48:C4C5_PP P 47 ? P 5 ? P 48 ? P 4 ? 1 A G 48 1_555 A C 4 1_555 A U 49 1_555 A A 3 1_555 0.883 -2.538 3.099 1.502 -1.667 21.821 -6.033 -1.746 3.333 -4.388 -3.955 21.935 8 PP_G48U49:A3C4_PP P 48 ? P 4 ? P 49 ? P 3 ? 1 A U 49 1_555 A A 3 1_555 A U 50 1_555 A G 2 1_555 -0.349 -1.547 3.102 5.007 4.210 36.921 -2.913 1.145 2.845 6.584 -7.831 37.477 9 PP_U49U50:G2A3_PP P 49 ? P 3 ? P 50 ? P 2 ? 1 A U 50 1_555 A G 2 1_555 A A 51 1_555 A G 1 1_555 0.537 -2.318 3.291 -0.972 3.858 -6.880 2.982 0.412 4.040 -29.155 -7.347 -7.946 10 PP_U50A51:G1G2_PP P 50 ? P 2 ? P 51 ? P 1 ? 1 A A 51 1_555 A G 1 1_555 A G 52 1_555 A U 71 1_555 0.351 -0.960 3.552 -5.395 3.422 51.243 -1.352 -0.795 3.435 3.939 6.210 51.613 11 PP_A51G52:U71G1_PP P 51 ? P 1 ? P 52 ? P 71 ? 1 A G 52 1_555 A U 71 1_555 A G 53 1_555 A C 70 1_555 -0.058 -1.518 3.470 -2.228 6.459 39.217 -2.999 -0.179 3.189 9.535 3.289 39.785 12 PP_G52G53:C70U71_PP P 52 ? P 71 ? P 53 ? P 70 ? 1 A G 53 1_555 A C 70 1_555 A U 54 1_555 A A 69 1_555 0.230 -1.709 3.159 -0.110 0.376 32.387 -3.128 -0.432 3.139 0.674 0.198 32.390 13 PP_G53U54:A69C70_PP P 53 ? P 70 ? P 54 ? P 69 ? 1 A U 54 1_555 A A 69 1_555 A G 55 1_555 A C 68 1_555 -0.085 -1.468 3.012 0.499 11.374 32.372 -4.009 0.211 2.374 19.658 -0.862 34.265 14 PP_U54G55:C68A69_PP P 54 ? P 69 ? P 55 ? P 68 ? 1 A G 55 1_555 A C 68 1_555 A C 56 1_555 A G 67 1_555 -0.689 -1.196 3.163 2.540 12.125 30.596 -3.952 1.601 2.461 21.885 -4.585 32.953 15 PP_G55C56:G67C68_PP P 55 ? P 68 ? P 56 ? P 67 ? 1 A C 56 1_555 A G 67 1_555 A U 57 1_555 A A 66 1_555 1.008 -1.791 3.188 -0.648 3.175 33.577 -3.575 -1.837 2.991 5.479 1.118 33.729 16 PP_C56U57:A66G67_PP P 56 ? P 67 ? P 57 ? P 66 ? 1 A U 57 1_555 A A 66 1_555 A C 58 1_555 A G 65 1_555 -0.330 -1.863 3.248 2.857 2.634 29.677 -4.133 1.210 3.031 5.114 -5.548 29.925 17 PP_U57C58:G65A66_PP P 57 ? P 66 ? P 58 ? P 65 ? 1 A C 58 1_555 A G 65 1_555 A C 59 1_555 A G 64 1_555 -0.570 -1.971 3.331 -0.746 5.529 30.108 -4.792 0.938 2.943 10.530 1.421 30.609 18 PP_C58C59:G64G65_PP P 58 ? P 65 ? P 59 ? P 64 ? 1 A G 18 1_555 A C 42 1_555 A U 20 1_555 A A 41 1_555 -0.609 -1.466 3.244 -3.135 0.865 42.409 -2.108 0.524 3.250 1.194 4.325 42.528 19 PP_G18U20:A41C42_PP P 18 ? P 42 ? P 20 ? P 41 ? 1 A U 20 1_555 A A 41 1_555 A C 21 1_555 A G 40 1_555 -0.922 -1.606 2.991 2.666 1.546 32.549 -3.092 2.049 2.831 2.750 -4.743 32.690 20 PP_U20C21:G40A41_PP P 20 ? P 41 ? P 21 ? P 40 ? 1 A C 21 1_555 A G 40 1_555 A G 22 1_555 A A 39 1_555 -0.265 -0.956 3.349 1.328 4.617 57.931 -1.231 0.344 3.264 4.757 -1.368 58.113 21 PP_C21G22:A39G40_PP P 21 ? P 40 ? P 22 ? P 39 ? 1 A G 22 1_555 A A 39 1_555 A A 23 1_555 A U 37 1_555 -1.342 -0.241 3.182 -3.725 -0.863 3.086 5.035 -18.232 3.058 -11.536 49.794 4.913 22 PP_G22A23:U37A39_PP P 22 ? P 39 ? P 23 ? P 37 ? 1 A A 23 1_555 A U 37 1_555 A C 25 1_555 A C 36 1_555 0.976 -3.146 4.856 -5.833 12.523 58.592 -3.999 -1.374 4.064 12.605 5.872 60.057 23 PP_A23C25:C36U37_PP P 23 ? P 37 ? P 25 ? P 36 ? 1 A C 25 1_555 A C 36 1_555 A A 26 1_555 A U 35 1_555 0.841 -1.226 3.770 4.539 8.385 42.386 -2.579 -0.638 3.544 11.425 -6.185 43.397 24 PP_C25A26:U35C36_PP P 25 ? P 36 ? P 26 ? P 35 ? 1 A A 26 1_555 A U 35 1_555 A G 27 1_555 A C 34 1_555 -0.675 -1.735 3.143 -1.164 5.825 35.526 -3.572 0.939 2.852 9.464 1.891 36.003 25 PP_A26G27:C34U35_PP P 26 ? P 35 ? P 27 ? P 34 ? 1 A G 27 1_555 A C 34 1_555 A C 28 1_555 A G 33 1_555 0.312 -1.869 3.378 7.532 3.676 33.482 -3.732 0.659 3.155 6.260 -12.826 34.486 26 PP_G27C28:G33C34_PP P 27 ? P 34 ? P 28 ? P 33 ? 1 A C 28 1_555 A G 33 1_555 A G 29 1_555 A A 32 1_555 -1.779 -0.917 2.944 -4.319 7.911 53.209 -1.453 1.721 2.916 8.761 4.783 53.912 27 PP_C28G29:A32G33_PP P 28 ? P 33 ? P 29 ? P 32 ? 1 B A 14 1_555 B G 11 1_555 B G 15 1_555 B C 10 1_555 1.717 -0.947 2.788 1.872 4.658 46.683 -1.516 -2.025 2.749 5.858 -2.355 46.937 28 QQ_A14G15:C10G11_QQ Q 14 ? Q 11 ? Q 15 ? Q 10 ? 1 B G 15 1_555 B C 10 1_555 B C 16 1_555 B G 9 1_555 -0.449 -2.031 3.273 -0.039 3.323 35.362 -3.803 0.731 3.076 5.456 0.064 35.513 29 QQ_G15C16:G9C10_QQ Q 15 ? Q 10 ? Q 16 ? Q 9 ? 1 B C 16 1_555 B G 9 1_555 B C 17 1_555 B G 8 1_555 -0.100 -1.819 3.091 3.862 8.675 26.566 -5.475 0.980 2.353 18.157 -8.084 28.183 30 QQ_C16C17:G8G9_QQ Q 16 ? Q 9 ? Q 17 ? Q 8 ? 1 B C 17 1_555 B G 8 1_555 B G 45 1_555 B C 7 1_555 -2.730 -0.724 3.997 -8.945 -3.331 59.240 -0.512 2.162 4.362 -3.346 8.986 59.936 31 QQ_C17G45:C7G8_QQ Q 17 ? Q 8 ? Q 45 ? Q 7 ? 1 B G 45 1_555 B C 7 1_555 B A 46 1_555 B U 6 1_555 -0.392 -1.908 2.988 1.915 3.248 28.676 -4.452 1.157 2.728 6.522 -3.845 28.918 32 QQ_G45A46:U6C7_QQ Q 45 ? Q 7 ? Q 46 ? Q 6 ? 1 B A 46 1_555 B U 6 1_555 B G 47 1_555 B C 5 1_555 0.168 -1.494 3.118 -0.318 4.802 24.376 -4.790 -0.478 2.775 11.233 0.744 24.840 33 QQ_A46G47:C5U6_QQ Q 46 ? Q 6 ? Q 47 ? Q 5 ? 1 B G 47 1_555 B C 5 1_555 B G 48 1_555 B C 4 1_555 0.980 -2.269 3.558 4.403 12.076 29.327 -6.261 -1.000 2.565 22.536 -8.217 31.963 34 QQ_G47G48:C4C5_QQ Q 47 ? Q 5 ? Q 48 ? Q 4 ? 1 B G 48 1_555 B C 4 1_555 B U 49 1_555 B A 3 1_555 -0.479 -2.096 3.336 -5.000 5.175 28.714 -5.176 -0.097 2.960 10.233 9.886 29.584 35 QQ_G48U49:A3C4_QQ Q 48 ? Q 4 ? Q 49 ? Q 3 ? 1 B U 49 1_555 B A 3 1_555 B U 50 1_555 B G 2 1_555 -0.120 -1.026 2.970 4.169 0.542 42.067 -1.473 0.553 2.933 0.753 -5.790 42.267 36 QQ_U49U50:G2A3_QQ Q 49 ? Q 3 ? Q 50 ? Q 2 ? 1 B U 50 1_555 B G 2 1_555 B A 51 1_555 B U 38 1_555 0.682 -4.575 3.611 3.233 4.078 -91.451 3.103 0.546 3.747 -2.846 2.256 -91.566 37 QQ_U50A51:U38G2_QQ Q 50 ? Q 2 ? Q 51 ? Q 38 ? 1 B A 51 1_555 B U 38 1_555 B G 52 1_555 B U 71 1_555 3.960 2.657 2.980 -11.306 5.152 143.473 1.375 -2.134 2.889 2.712 5.950 143.695 38 QQ_A51G52:U71U38_QQ Q 51 ? Q 38 ? Q 52 ? Q 71 ? 1 B G 52 1_555 B U 71 1_555 B G 53 1_555 B C 70 1_555 -0.152 -1.782 3.323 -2.718 10.926 39.389 -3.685 -0.065 2.758 15.822 3.936 40.905 39 QQ_G52G53:C70U71_QQ Q 52 ? Q 71 ? Q 53 ? Q 70 ? 1 B G 53 1_555 B C 70 1_555 B U 54 1_555 B A 69 1_555 0.403 -2.272 3.279 -0.927 5.289 30.784 -5.166 -0.915 2.845 9.870 1.729 31.238 40 QQ_G53U54:A69C70_QQ Q 53 ? Q 70 ? Q 54 ? Q 69 ? 1 B U 54 1_555 B A 69 1_555 B G 55 1_555 B C 68 1_555 -0.663 -1.933 3.313 -0.230 6.779 26.819 -5.597 1.334 2.755 14.327 0.487 27.648 41 QQ_U54G55:C68A69_QQ Q 54 ? Q 69 ? Q 55 ? Q 68 ? 1 B G 55 1_555 B C 68 1_555 B C 56 1_555 B G 67 1_555 -0.061 -1.161 3.150 0.495 6.770 35.633 -2.749 0.162 2.887 10.940 -0.799 36.253 42 QQ_G55C56:G67C68_QQ Q 55 ? Q 68 ? Q 56 ? Q 67 ? 1 B C 56 1_555 B G 67 1_555 B U 57 1_555 B A 66 1_555 0.647 -1.054 3.156 2.907 4.109 36.634 -2.191 -0.646 3.065 6.499 -4.599 36.966 43 QQ_C56U57:A66G67_QQ Q 56 ? Q 67 ? Q 57 ? Q 66 ? 1 B U 57 1_555 B A 66 1_555 B C 58 1_555 B G 65 1_555 0.084 -1.788 3.182 3.796 2.799 25.468 -4.724 0.807 2.953 6.280 -8.518 25.894 44 QQ_U57C58:G65A66_QQ Q 57 ? Q 66 ? Q 58 ? Q 65 ? 1 B C 58 1_555 B G 65 1_555 B C 59 1_555 B G 64 1_555 0.013 -1.987 3.494 1.789 3.441 31.552 -4.280 0.316 3.261 6.298 -3.275 31.783 45 QQ_C58C59:G64G65_QQ Q 58 ? Q 65 ? Q 59 ? Q 64 ? 1 B C 59 1_555 B G 64 1_555 B G 60 1_555 B A 63 1_555 -2.116 -1.265 3.238 -2.323 8.514 43.600 -2.437 2.588 3.055 11.324 3.089 44.442 46 QQ_C59G60:A63G64_QQ Q 59 ? Q 64 ? Q 60 ? Q 63 ? 1 B G 18 1_555 B C 42 1_555 B U 20 1_555 B A 41 1_555 -0.639 -1.397 3.172 0.741 2.938 39.521 -2.388 1.024 3.053 4.338 -1.093 39.632 47 QQ_G18U20:A41C42_QQ Q 18 ? Q 42 ? Q 20 ? Q 41 ? 1 B U 20 1_555 B A 41 1_555 B C 21 1_555 B G 40 1_555 -0.722 -2.176 3.094 -2.072 5.252 28.875 -5.293 1.024 2.708 10.406 4.106 29.410 48 QQ_U20C21:G40A41_QQ Q 20 ? Q 41 ? Q 21 ? Q 40 ? 1 B C 21 1_555 B G 40 1_555 B G 22 1_555 B A 39 1_555 0.301 -0.915 3.170 7.485 4.003 61.060 -1.075 0.045 3.125 3.920 -7.329 61.591 49 QQ_C21G22:A39G40_QQ Q 21 ? Q 40 ? Q 22 ? Q 39 ? 1 B G 22 1_555 B A 39 1_555 B A 23 1_555 B U 37 1_555 -2.747 -0.043 3.319 5.382 -2.010 9.909 2.093 19.954 1.593 -10.550 -28.248 11.450 50 QQ_G22A23:U37A39_QQ Q 22 ? Q 39 ? Q 23 ? Q 37 ? 1 B A 23 1_555 B U 37 1_555 B C 25 1_555 B C 36 1_555 2.153 -2.730 5.794 6.710 24.281 62.835 -4.058 -1.505 4.764 22.365 -6.181 67.214 51 QQ_A23C25:C36U37_QQ Q 23 ? Q 37 ? Q 25 ? Q 36 ? 1 B C 25 1_555 B C 36 1_555 B A 26 1_555 B U 35 1_555 0.132 -1.010 4.242 -12.173 20.398 40.678 -3.367 -1.417 3.255 26.772 15.978 46.851 52 QQ_C25A26:U35C36_QQ Q 25 ? Q 36 ? Q 26 ? Q 35 ? 1 B A 26 1_555 B U 35 1_555 B G 27 1_555 B C 34 1_555 -0.811 -2.117 3.742 1.643 3.482 25.964 -5.689 2.271 3.377 7.696 -3.631 26.243 53 QQ_A26G27:C34U35_QQ Q 26 ? Q 35 ? Q 27 ? Q 34 ? 1 B G 27 1_555 B C 34 1_555 B C 28 1_555 B G 33 1_555 1.303 -1.569 3.495 10.246 -7.140 42.964 -1.310 -0.633 3.892 -9.510 -13.647 44.659 54 QQ_G27C28:G33C34_QQ Q 27 ? Q 34 ? Q 28 ? Q 33 ? # _atom_sites.entry_id 2OIU _atom_sites.fract_transf_matrix[1][1] 0.022080 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.005676 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009998 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014354 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P # loop_