HEADER OXIDOREDUCTASE 12-JAN-07 2OJD OBSLTE 19-FEB-08 2OJD 3C6G TITLE STRUCTURAL ANALYSIS OF CYP2R1 IN COMPLEX WITH VITAMIN D3 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYTOCHROME P450 2R1; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: VITAMIN D 25-HYDROXYLASE; COMPND 5 EC: 1.14.14.-; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 GENE: CYP2R1; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_COMMON: BACTERIA; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: JM109; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PCW KEYWDS CYTOCHROME P450, VITAMIN D, VITAMIN S 25-HYDROXYLASE, DRUG KEYWDS 2 METABOLISM, STRUCTURAL GENOMICS, STRUCTURAL GENOMICS KEYWDS 3 CONSORTIUM, SGC EXPDTA X-RAY DIFFRACTION AUTHOR N.V.STRUSHKEVICH,J.MIN,P.LOPPNAU,W.TEMPEL,C.H.ARROWSMITH, AUTHOR 2 A.M.EDWARDS,M.SUNDSTROM,J.WEIGELT,A.BOCHKAREV,A.N.PLOTNIKOV, AUTHOR 3 S.A.USANOV,G.JONES,H.PARK,STRUCTURAL GENOMICS CONSORTIUM AUTHOR 4 (SGC) REVDAT 2 19-FEB-08 2OJD 1 OBSLTE REVDAT 1 30-JAN-07 2OJD 0 JRNL AUTH N.V.STRUSHKEVICH,J.MIN,P.LOPPNAU,W.TEMPEL, JRNL AUTH 2 C.H.ARROWSMITH,A.M.EDWARDS,M.SUNDSTROM,J.WEIGELT, JRNL AUTH 3 A.BOCHKAREV,A.N.PLOTNIKOV,S.A.USANOV,G.JONES,H.PARK JRNL TITL STRUCTURAL ANALYSIS OF CYP2R1 IN COMPLEX WITH JRNL TITL 2 VITAMIN D3 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019, COOT, PRODRG REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 3 NUMBER OF REFLECTIONS : 47389 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.218 REMARK 3 FREE R VALUE : 0.255 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.054 REMARK 3 FREE R VALUE TEST SET COUNT : 2395 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH : 2.69 REMARK 3 BIN RESOLUTION RANGE LOW : 2.75 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2819 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 84.10 REMARK 3 BIN R VALUE (WORKING SET) : 0.3480 REMARK 3 BIN FREE R VALUE SET COUNT : 149 REMARK 3 BIN FREE R VALUE : 0.3890 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 ALL ATOMS : 7966 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 36.53 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.80100 REMARK 3 B22 (A**2) : -1.82400 REMARK 3 B33 (A**2) : -0.97600 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.467 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.294 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.224 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 10.766 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.921 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.900 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 8105 ; 0.011 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 11041 ; 1.363 ; 2.016 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 929 ; 5.432 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 379 ;33.173 ;23.325 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1291 ;17.750 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 48 ;25.110 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1201 ; 0.091 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6108 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 3673 ; 0.224 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 5564 ; 0.319 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 254 ; 0.147 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 59 ; 0.255 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 4 ; 0.229 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 4742 ; 0.936 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 7532 ; 1.202 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 4423 ; 1.815 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 3505 ; 2.666 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 0 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 0 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 2OJD COMPLIES WITH FORMAT V. 3.0, 1-DEC-2006 REMARK 4 REMARK 4 THIS IS THE REMEDIATED VERSION OF THIS PDB ENTRY. REMARK 4 REMEDIATED DATA FILE REVISION 3.101 (2007-05-29) REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB. REMARK 100 THE RCSB ID CODE IS RCSB041208. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-DEC-2006 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 6.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 17-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : HKL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 47597 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : 7.100 REMARK 200 R MERGE (I) : 0.13800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.80 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 4.90 REMARK 200 R MERGE FOR SHELL (I) : 0.80900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1SUO REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 69.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.00 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.1M AMMONIUM SULFATE, 0.1M ADA, PH REMARK 280 6.5, VAPOR DIFFUSION, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,1/2+Z REMARK 290 3555 -X,Y,1/2-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 1/2+X,1/2+Y,Z REMARK 290 6555 1/2-X,1/2-Y,1/2+Z REMARK 290 7555 1/2-X,1/2+Y,1/2-Z REMARK 290 8555 1/2+X,1/2-Y,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 76.37750 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 76.37750 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 68.84000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 81.52550 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 68.84000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 81.52550 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 76.37750 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 68.84000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 81.52550 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 76.37750 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 68.84000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 81.52550 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT REMARK 300 WHICH CONSISTS OF 2 CHAIN(S). THE BIOLOGICAL UNIT OF THE REMARK 300 PROTEIN IS NOT KNOWN REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 27 REMARK 465 ALA A 28 REMARK 465 LYS A 29 REMARK 465 LYS A 30 REMARK 465 THR A 31 REMARK 465 LYS A 32 REMARK 465 GLN A 33 REMARK 465 ARG A 34 REMARK 465 ARG A 35 REMARK 465 PRO A 36 REMARK 465 MET A 37 REMARK 465 GLY A 38 REMARK 465 HIS A 503 REMARK 465 HIS A 504 REMARK 465 HIS A 505 REMARK 465 MET B 27 REMARK 465 ALA B 28 REMARK 465 LYS B 29 REMARK 465 LYS B 30 REMARK 465 THR B 31 REMARK 465 LYS B 32 REMARK 465 GLN B 33 REMARK 465 ARG B 34 REMARK 465 ARG B 35 REMARK 465 PRO B 36 REMARK 465 MET B 37 REMARK 465 GLY B 38 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI REMARK 500 O HOH 102 O HOH 103 1.92 REMARK 500 OD1 ASP B 80 O GLY B 82 2.17 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),F6.3) REMARK 500 REMARK 500 EXPECTED VALUES: ENGH AND HUBER, 1991 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ARG A 128 CB ARG A 128 CG -0.064 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES: ENGH AND HUBER, 1991 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 128 CG - CD - NE ANGL. DEV. = -7.9 DEGREES REMARK 500 ILE A 379 N - CA - C ANGL. DEV. = -9.9 DEGREES REMARK 500 GLY B 82 N - CA - C ANGL. DEV. = -8.2 DEGREES REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 48 -66.29 72.34 REMARK 500 PHE B 48 -66.96 75.96 REMARK 600 REMARK 600 HETEROGEN REMARK 600 2-HYDROXYPROPYL-BETA-CYCLODEXTRIN WAS ADDED TO THE PROTEIN REMARK 600 SAMPLE. DUE TO LIMITED RESOLUTION OF THE ELECTRON DENSITY REMARK 600 MAP AND LACK OF A PRECISE CHEMICAL DESCRIPTION OF THE REMARK 600 ADDITIVE, IT WAS MODELED HERE AS BETA-CYCLODEXTRIN DBREF 2OJD A 32 501 UNP Q6VVX0 CP2R1_HUMAN 32 501 DBREF 2OJD B 32 501 UNP Q6VVX0 CP2R1_HUMAN 32 501 SEQADV 2OJD MET A 27 UNP Q6VVX0 INITIATING METHIONINE SEQADV 2OJD ALA A 28 UNP Q6VVX0 CLONING ARTIFACT SEQADV 2OJD LYS A 29 UNP Q6VVX0 CLONING ARTIFACT SEQADV 2OJD LYS A 30 UNP Q6VVX0 CLONING ARTIFACT SEQADV 2OJD THR A 31 UNP Q6VVX0 CLONING ARTIFACT SEQADV 2OJD HIS A 502 UNP Q6VVX0 HIS TAG SEQADV 2OJD HIS A 503 UNP Q6VVX0 HIS TAG SEQADV 2OJD HIS A 504 UNP Q6VVX0 HIS TAG SEQADV 2OJD HIS A 505 UNP Q6VVX0 HIS TAG SEQADV 2OJD MET B 27 UNP Q6VVX0 INITIATING METHIONINE SEQADV 2OJD ALA B 28 UNP Q6VVX0 CLONING ARTIFACT SEQADV 2OJD LYS B 29 UNP Q6VVX0 CLONING ARTIFACT SEQADV 2OJD LYS B 30 UNP Q6VVX0 CLONING ARTIFACT SEQADV 2OJD THR B 31 UNP Q6VVX0 CLONING ARTIFACT SEQADV 2OJD HIS B 502 UNP Q6VVX0 HIS TAG SEQADV 2OJD HIS B 503 UNP Q6VVX0 HIS TAG SEQADV 2OJD HIS B 504 UNP Q6VVX0 HIS TAG SEQADV 2OJD HIS B 505 UNP Q6VVX0 HIS TAG SEQRES 1 A 479 MET ALA LYS LYS THR LYS GLN ARG ARG PRO MET GLY PHE SEQRES 2 A 479 PRO PRO GLY PRO PRO GLY LEU PRO PHE ILE GLY ASN ILE SEQRES 3 A 479 TYR SER LEU ALA ALA SER SER GLU LEU PRO HIS VAL TYR SEQRES 4 A 479 MET ARG LYS GLN SER GLN VAL TYR GLY GLU ILE PHE SER SEQRES 5 A 479 LEU ASP LEU GLY GLY ILE SER THR VAL VAL LEU ASN GLY SEQRES 6 A 479 TYR ASP VAL VAL LYS GLU CYS LEU VAL HIS GLN SER GLU SEQRES 7 A 479 ILE PHE ALA ASP ARG PRO CYS LEU PRO LEU PHE MET LYS SEQRES 8 A 479 MET THR LYS MET GLY GLY LEU LEU ASN SER ARG TYR GLY SEQRES 9 A 479 ARG GLY TRP VAL ASP HIS ARG ARG LEU ALA VAL ASN SER SEQRES 10 A 479 PHE ARG TYR PHE GLY TYR GLY GLN LYS SER PHE GLU SER SEQRES 11 A 479 LYS ILE LEU GLU GLU THR LYS PHE PHE ASN ASP ALA ILE SEQRES 12 A 479 GLU THR TYR LYS GLY ARG PRO PHE ASP PHE LYS GLN LEU SEQRES 13 A 479 ILE THR ASN ALA VAL SER ASN ILE THR ASN LEU ILE ILE SEQRES 14 A 479 PHE GLY GLU ARG PHE THR TYR GLU ASP THR ASP PHE GLN SEQRES 15 A 479 HIS MET ILE GLU LEU PHE SER GLU ASN VAL GLU LEU ALA SEQRES 16 A 479 ALA SER ALA SER VAL PHE LEU TYR ASN ALA PHE PRO TRP SEQRES 17 A 479 ILE GLY ILE LEU PRO PHE GLY LYS HIS GLN GLN LEU PHE SEQRES 18 A 479 ARG ASN ALA ALA VAL VAL TYR ASP PHE LEU SER ARG LEU SEQRES 19 A 479 ILE GLU LYS ALA SER VAL ASN ARG LYS PRO GLN LEU PRO SEQRES 20 A 479 GLN HIS PHE VAL ASP ALA TYR LEU ASP GLU MET ASP GLN SEQRES 21 A 479 GLY LYS ASN ASP PRO SER SER THR PHE SER LYS GLU ASN SEQRES 22 A 479 LEU ILE PHE SER VAL GLY GLU LEU ILE ILE ALA GLY THR SEQRES 23 A 479 GLU THR THR THR ASN VAL LEU ARG TRP ALA ILE LEU PHE SEQRES 24 A 479 MET ALA LEU TYR PRO ASN ILE GLN GLY GLN VAL GLN LYS SEQRES 25 A 479 GLU ILE ASP LEU ILE MET GLY PRO ASN GLY LYS PRO SER SEQRES 26 A 479 TRP ASP ASP LYS CYS LYS MET PRO TYR THR GLU ALA VAL SEQRES 27 A 479 LEU HIS GLU VAL LEU ARG PHE CYS ASN ILE VAL PRO LEU SEQRES 28 A 479 GLY ILE PHE HIS ALA THR SER GLU ASP ALA VAL VAL ARG SEQRES 29 A 479 GLY TYR SER ILE PRO LYS GLY THR THR VAL ILE THR ASN SEQRES 30 A 479 LEU TYR SER VAL HIS PHE ASP GLU LYS TYR TRP ARG ASP SEQRES 31 A 479 PRO GLU VAL PHE HIS PRO GLU ARG PHE LEU ASP SER SER SEQRES 32 A 479 GLY TYR PHE ALA LYS LYS GLU ALA LEU VAL PRO PHE SER SEQRES 33 A 479 LEU GLY ARG ARG HIS CYS LEU GLY GLU HIS LEU ALA ARG SEQRES 34 A 479 MET GLU MET PHE LEU PHE PHE THR ALA LEU LEU GLN ARG SEQRES 35 A 479 PHE HIS LEU HIS PHE PRO HIS GLU LEU VAL PRO ASP LEU SEQRES 36 A 479 LYS PRO ARG LEU GLY MET THR LEU GLN PRO GLN PRO TYR SEQRES 37 A 479 LEU ILE CYS ALA GLU ARG ARG HIS HIS HIS HIS SEQRES 1 B 479 MET ALA LYS LYS THR LYS GLN ARG ARG PRO MET GLY PHE SEQRES 2 B 479 PRO PRO GLY PRO PRO GLY LEU PRO PHE ILE GLY ASN ILE SEQRES 3 B 479 TYR SER LEU ALA ALA SER SER GLU LEU PRO HIS VAL TYR SEQRES 4 B 479 MET ARG LYS GLN SER GLN VAL TYR GLY GLU ILE PHE SER SEQRES 5 B 479 LEU ASP LEU GLY GLY ILE SER THR VAL VAL LEU ASN GLY SEQRES 6 B 479 TYR ASP VAL VAL LYS GLU CYS LEU VAL HIS GLN SER GLU SEQRES 7 B 479 ILE PHE ALA ASP ARG PRO CYS LEU PRO LEU PHE MET LYS SEQRES 8 B 479 MET THR LYS MET GLY GLY LEU LEU ASN SER ARG TYR GLY SEQRES 9 B 479 ARG GLY TRP VAL ASP HIS ARG ARG LEU ALA VAL ASN SER SEQRES 10 B 479 PHE ARG TYR PHE GLY TYR GLY GLN LYS SER PHE GLU SER SEQRES 11 B 479 LYS ILE LEU GLU GLU THR LYS PHE PHE ASN ASP ALA ILE SEQRES 12 B 479 GLU THR TYR LYS GLY ARG PRO PHE ASP PHE LYS GLN LEU SEQRES 13 B 479 ILE THR ASN ALA VAL SER ASN ILE THR ASN LEU ILE ILE SEQRES 14 B 479 PHE GLY GLU ARG PHE THR TYR GLU ASP THR ASP PHE GLN SEQRES 15 B 479 HIS MET ILE GLU LEU PHE SER GLU ASN VAL GLU LEU ALA SEQRES 16 B 479 ALA SER ALA SER VAL PHE LEU TYR ASN ALA PHE PRO TRP SEQRES 17 B 479 ILE GLY ILE LEU PRO PHE GLY LYS HIS GLN GLN LEU PHE SEQRES 18 B 479 ARG ASN ALA ALA VAL VAL TYR ASP PHE LEU SER ARG LEU SEQRES 19 B 479 ILE GLU LYS ALA SER VAL ASN ARG LYS PRO GLN LEU PRO SEQRES 20 B 479 GLN HIS PHE VAL ASP ALA TYR LEU ASP GLU MET ASP GLN SEQRES 21 B 479 GLY LYS ASN ASP PRO SER SER THR PHE SER LYS GLU ASN SEQRES 22 B 479 LEU ILE PHE SER VAL GLY GLU LEU ILE ILE ALA GLY THR SEQRES 23 B 479 GLU THR THR THR ASN VAL LEU ARG TRP ALA ILE LEU PHE SEQRES 24 B 479 MET ALA LEU TYR PRO ASN ILE GLN GLY GLN VAL GLN LYS SEQRES 25 B 479 GLU ILE ASP LEU ILE MET GLY PRO ASN GLY LYS PRO SER SEQRES 26 B 479 TRP ASP ASP LYS CYS LYS MET PRO TYR THR GLU ALA VAL SEQRES 27 B 479 LEU HIS GLU VAL LEU ARG PHE CYS ASN ILE VAL PRO LEU SEQRES 28 B 479 GLY ILE PHE HIS ALA THR SER GLU ASP ALA VAL VAL ARG SEQRES 29 B 479 GLY TYR SER ILE PRO LYS GLY THR THR VAL ILE THR ASN SEQRES 30 B 479 LEU TYR SER VAL HIS PHE ASP GLU LYS TYR TRP ARG ASP SEQRES 31 B 479 PRO GLU VAL PHE HIS PRO GLU ARG PHE LEU ASP SER SER SEQRES 32 B 479 GLY TYR PHE ALA LYS LYS GLU ALA LEU VAL PRO PHE SER SEQRES 33 B 479 LEU GLY ARG ARG HIS CYS LEU GLY GLU HIS LEU ALA ARG SEQRES 34 B 479 MET GLU MET PHE LEU PHE PHE THR ALA LEU LEU GLN ARG SEQRES 35 B 479 PHE HIS LEU HIS PHE PRO HIS GLU LEU VAL PRO ASP LEU SEQRES 36 B 479 LYS PRO ARG LEU GLY MET THR LEU GLN PRO GLN PRO TYR SEQRES 37 B 479 LEU ILE CYS ALA GLU ARG ARG HIS HIS HIS HIS HET BCD 800 77 HET BCD 801 77 HET HEM B 600 43 HET HEM A 601 43 HET VD3 700 28 HET VD3 701 28 HETNAM BCD BETA-CYCLODEXTRIN HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETNAM VD3 (1S,3Z)-3-[(2E)-2-[(1R,3AR,7AS)-7A-METHYL-1-[(2R)-6- HETNAM 2 VD3 METHYLHEPTAN-2-YL]-2,3,3A,5,6,7-HEXAHYDRO-1H-INDEN-4- HETNAM 3 VD3 YLIDENE]ETHYLIDENE]-4-METHYLIDENE-CYCLOHEXAN-1-OL HETSYN BCD CYCLO-HEPTA-AMYLOSE HETSYN HEM HEME HETSYN VD3 VITAMIN D3 FORMUL 3 BCD 2(C42 H70 O35) FORMUL 5 HEM 2(C34 H32 FE N4 O4) FORMUL 7 VD3 2(C27 H44 O) FORMUL 9 HOH *114(H2 O) HELIX 1 1 GLY A 50 SER A 58 1 9 HELIX 2 2 LEU A 61 GLY A 74 1 14 HELIX 3 3 GLY A 91 VAL A 100 1 10 HELIX 4 4 LEU A 112 LYS A 120 1 9 HELIX 5 5 GLY A 130 GLY A 148 1 19 HELIX 6 6 SER A 153 THR A 171 1 19 HELIX 7 7 PHE A 179 PHE A 196 1 18 HELIX 8 8 ASP A 204 ALA A 221 1 18 HELIX 9 9 SER A 223 PHE A 232 1 10 HELIX 10 10 PRO A 233 LEU A 238 5 6 HELIX 11 11 GLY A 241 VAL A 266 1 26 HELIX 12 12 HIS A 275 GLY A 287 1 13 HELIX 13 13 SER A 296 TYR A 329 1 34 HELIX 14 14 TYR A 329 MET A 344 1 16 HELIX 15 15 SER A 351 LYS A 357 5 7 HELIX 16 16 MET A 358 ASN A 373 1 16 HELIX 17 17 ASN A 403 PHE A 409 1 7 HELIX 18 18 HIS A 421 LEU A 426 5 6 HELIX 19 19 LEU A 443 HIS A 447 5 5 HELIX 20 20 GLY A 450 ARG A 468 1 19 HELIX 21 21 PHE A 473 LEU A 477 5 5 HELIX 22 22 ASN B 51 ALA B 57 1 7 HELIX 23 23 LEU B 61 GLY B 74 1 14 HELIX 24 24 GLY B 91 VAL B 100 1 10 HELIX 25 25 LEU B 112 LYS B 120 1 9 HELIX 26 26 GLY B 130 PHE B 147 1 18 HELIX 27 27 SER B 153 THR B 171 1 19 HELIX 28 28 PHE B 179 GLY B 197 1 19 HELIX 29 29 ASP B 204 ALA B 221 1 18 HELIX 30 30 SER B 223 PHE B 232 1 10 HELIX 31 31 PRO B 233 LEU B 238 5 6 HELIX 32 32 LYS B 242 ALA B 264 1 23 HELIX 33 33 HIS B 275 GLN B 286 1 12 HELIX 34 34 SER B 296 TYR B 329 1 34 HELIX 35 35 TYR B 329 MET B 344 1 16 HELIX 36 36 TRP B 352 CYS B 356 5 5 HELIX 37 37 MET B 358 ASN B 373 1 16 HELIX 38 38 LEU B 404 PHE B 409 1 6 HELIX 39 39 HIS B 421 LEU B 426 5 6 HELIX 40 40 GLY B 450 ARG B 468 1 19 HELIX 41 41 PHE B 473 LEU B 477 5 5 SHEET 1 A 4 ILE A 76 LEU A 81 0 SHEET 2 A 4 ILE A 84 LEU A 89 -1 O VAL A 88 N PHE A 77 SHEET 3 A 4 THR A 399 THR A 402 1 O ILE A 401 N VAL A 87 SHEET 4 A 4 HIS A 381 ALA A 382 -1 N HIS A 381 O VAL A 400 SHEET 1 B 2 ALA A 387 VAL A 389 0 SHEET 2 B 2 TYR A 392 ILE A 394 -1 O ILE A 394 N ALA A 387 SHEET 1 C 2 PHE A 469 HIS A 472 0 SHEET 2 C 2 CYS A 497 ARG A 500 -1 O CYS A 497 N HIS A 472 SHEET 1 D 4 ILE B 76 LEU B 81 0 SHEET 2 D 4 ILE B 84 ASN B 90 -1 O THR B 86 N LEU B 79 SHEET 3 D 4 THR B 399 ASN B 403 1 O THR B 399 N VAL B 87 SHEET 4 D 4 HIS B 381 ALA B 382 -1 N HIS B 381 O VAL B 400 SHEET 1 E 2 ALA B 387 VAL B 389 0 SHEET 2 E 2 TYR B 392 ILE B 394 -1 O ILE B 394 N ALA B 387 SHEET 1 F 2 PHE B 469 HIS B 472 0 SHEET 2 F 2 CYS B 497 ARG B 500 -1 O CYS B 497 N HIS B 472 LINK SG CYS A 448 FE HEM A 601 LINK SG CYS B 448 FE HEM B 600 CRYST1 137.680 163.051 152.755 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007263 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006133 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006546 0.00000