HEADER APOPTOSIS 13-JAN-07 2OJQ TITLE CRYSTAL STRUCTURE OF ALIX V DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROGRAMMED CELL DEATH 6-INTERACTING PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: V DOMAIN, RESIDUES 360-702; COMPND 5 SYNONYM: PDCD6-INTERACTING PROTEIN, ALG-2-INTERACTING PROTEIN 1, COMPND 6 HP95; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PDCD6IP, AIP1, ALIX, KIAA1375; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PGST2 KEYWDS HELICAL, APOPTOSIS EXPDTA X-RAY DIFFRACTION AUTHOR S.LEE,J.H.HURLEY REVDAT 6 27-DEC-23 2OJQ 1 SEQADV LINK REVDAT 5 31-JAN-18 2OJQ 1 REMARK REVDAT 4 13-JUL-11 2OJQ 1 VERSN REVDAT 3 24-FEB-09 2OJQ 1 VERSN REVDAT 2 27-MAR-07 2OJQ 1 JRNL REVDAT 1 20-FEB-07 2OJQ 0 JRNL AUTH S.LEE,A.JOSHI,K.NAGASHIMA,E.O.FREED,J.H.HURLEY JRNL TITL STRUCTURAL BASIS FOR VIRAL LATE-DOMAIN BINDING TO ALIX JRNL REF NAT.STRUCT.MOL.BIOL. V. 14 194 2007 JRNL REFN ISSN 1545-9993 JRNL PMID 17277784 JRNL DOI 10.1038/NSMB1203 REMARK 2 REMARK 2 RESOLUTION. 2.87 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.87 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 113.23 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 96.3 REMARK 3 NUMBER OF REFLECTIONS : 9414 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.257 REMARK 3 R VALUE (WORKING SET) : 0.250 REMARK 3 FREE R VALUE : 0.318 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1030 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.87 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 542 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 76.33 REMARK 3 BIN R VALUE (WORKING SET) : 0.3030 REMARK 3 BIN FREE R VALUE SET COUNT : 61 REMARK 3 BIN FREE R VALUE : 0.4990 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2704 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 78.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 75.86 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.04000 REMARK 3 B22 (A**2) : -3.24000 REMARK 3 B33 (A**2) : 6.58000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 3.66000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.514 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.403 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 45.038 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.916 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.875 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2733 ; 0.013 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3688 ; 1.496 ; 1.981 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 342 ; 5.755 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 134 ;42.646 ;25.821 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 531 ;21.527 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 19 ;28.308 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 433 ; 0.095 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2024 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1404 ; 0.253 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1876 ; 0.312 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 127 ; 0.170 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 27 ; 0.245 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 4 ; 0.272 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1761 ; 0.497 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2767 ; 0.843 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1070 ; 1.461 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 921 ; 2.321 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 360 A 410 REMARK 3 RESIDUE RANGE : A 540 A 642 REMARK 3 ORIGIN FOR THE GROUP (A): 4.2524 23.9304 28.7648 REMARK 3 T TENSOR REMARK 3 T11: 0.0759 T22: 0.0492 REMARK 3 T33: 0.3162 T12: 0.0330 REMARK 3 T13: 0.1831 T23: 0.3454 REMARK 3 L TENSOR REMARK 3 L11: 7.8579 L22: 1.1601 REMARK 3 L33: 5.7807 L12: -0.5155 REMARK 3 L13: -5.5245 L23: 0.8631 REMARK 3 S TENSOR REMARK 3 S11: -0.9162 S12: -1.3701 S13: -1.3809 REMARK 3 S21: 0.7769 S22: 0.1546 S23: 0.3740 REMARK 3 S31: 1.2536 S32: 0.3077 S33: 0.7617 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 411 A 539 REMARK 3 RESIDUE RANGE : A 643 A 702 REMARK 3 ORIGIN FOR THE GROUP (A): -5.1056 49.6215 24.2753 REMARK 3 T TENSOR REMARK 3 T11: -0.1534 T22: -0.0419 REMARK 3 T33: -0.3843 T12: 0.0969 REMARK 3 T13: 0.0720 T23: -0.0425 REMARK 3 L TENSOR REMARK 3 L11: 2.8655 L22: 7.6006 REMARK 3 L33: 9.5998 L12: 0.1918 REMARK 3 L13: -0.6715 L23: -6.8455 REMARK 3 S TENSOR REMARK 3 S11: -0.0663 S12: -1.1019 S13: -0.0486 REMARK 3 S21: 1.5766 S22: 0.4751 S23: 0.7648 REMARK 3 S31: -0.8219 S32: -0.6885 S33: -0.4088 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2OJQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-JAN-07. REMARK 100 THE DEPOSITION ID IS D_1000041221. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-SEP-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X25 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795, 0.9799, 0.9600 REMARK 200 MONOCHROMATOR : SI(111), SI(220) REMARK 200 OPTICS : MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 10483 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.900 REMARK 200 RESOLUTION RANGE LOW (A) : 113.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.1 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : 0.06700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 86.6 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : 0.31700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.08 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.01 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 13-15% PEG 6000, 6-10% ETHYLENE REMARK 280 GLYCOL, PH 8.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 100K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 27.69000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A MONOMER. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 355 REMARK 465 ALA A 356 REMARK 465 MSE A 357 REMARK 465 GLY A 358 REMARK 465 SER A 359 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU A 462 NH1 ARG A 489 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 SER A 423 CB SER A 423 OG 0.186 REMARK 500 GLU A 645 CD GLU A 645 OE1 0.071 REMARK 500 GLU A 645 CD GLU A 645 OE2 0.078 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 361 15.60 -155.90 REMARK 500 ASN A 400 73.90 16.06 REMARK 500 ASP A 411 -64.15 -23.06 REMARK 500 GLN A 415 -122.43 -118.67 REMARK 500 SER A 416 14.46 -66.73 REMARK 500 LYS A 473 -101.89 -163.04 REMARK 500 ARG A 478 170.27 -59.91 REMARK 500 GLU A 527 -31.24 -144.04 REMARK 500 LEU A 530 -73.02 -63.48 REMARK 500 ASN A 531 -25.81 -37.10 REMARK 500 ALA A 532 -86.61 -105.26 REMARK 500 SER A 536 83.66 45.36 REMARK 500 MSE A 543 76.71 -55.85 REMARK 500 GLN A 544 -125.22 -93.22 REMARK 500 ASP A 579 97.93 79.52 REMARK 500 GLN A 590 -40.44 -134.57 REMARK 500 ASN A 595 76.36 -105.80 REMARK 500 LEU A 619 -72.27 -68.14 REMARK 500 LYS A 620 16.23 -67.79 REMARK 500 ILE A 629 -41.63 -134.39 REMARK 500 LYS A 640 106.06 -3.79 REMARK 500 GLN A 641 -85.69 -56.91 REMARK 500 ASN A 644 -77.33 -164.97 REMARK 500 GLU A 650 -83.41 -81.18 REMARK 500 GLU A 651 -35.46 -36.90 REMARK 500 LEU A 670 -75.83 -59.63 REMARK 500 LYS A 671 -47.32 -29.36 REMARK 500 REMARK 500 REMARK: NULL REMARK 999 REMARK 999 SEQUENCE REMARK 999 SER 555 AGREES WITH THE GENE BANK ENTRY AF349951 DBREF 2OJQ A 360 702 UNP Q8WUM4 PDC6I_HUMAN 360 702 SEQADV 2OJQ GLY A 355 UNP Q8WUM4 CLONING ARTIFACT SEQADV 2OJQ ALA A 356 UNP Q8WUM4 CLONING ARTIFACT SEQADV 2OJQ MSE A 357 UNP Q8WUM4 CLONING ARTIFACT SEQADV 2OJQ GLY A 358 UNP Q8WUM4 CLONING ARTIFACT SEQADV 2OJQ SER A 359 UNP Q8WUM4 CLONING ARTIFACT SEQADV 2OJQ MSE A 385 UNP Q8WUM4 MET 385 MODIFIED RESIDUE SEQADV 2OJQ MSE A 543 UNP Q8WUM4 MET 543 MODIFIED RESIDUE SEQADV 2OJQ SER A 550 UNP Q8WUM4 ASN 550 SEE REMARK 999 SEQADV 2OJQ MSE A 580 UNP Q8WUM4 MET 580 MODIFIED RESIDUE SEQADV 2OJQ MSE A 639 UNP Q8WUM4 MET 639 MODIFIED RESIDUE SEQRES 1 A 348 GLY ALA MSE GLY SER PRO VAL SER VAL GLN GLN SER LEU SEQRES 2 A 348 ALA ALA TYR ASN GLN ARG LYS ALA ASP LEU VAL ASN ARG SEQRES 3 A 348 SER ILE ALA GLN MSE ARG GLU ALA THR THR LEU ALA ASN SEQRES 4 A 348 GLY VAL LEU ALA SER LEU ASN LEU PRO ALA ALA ILE GLU SEQRES 5 A 348 ASP VAL SER GLY ASP THR VAL PRO GLN SER ILE LEU THR SEQRES 6 A 348 LYS SER ARG SER VAL ILE GLU GLN GLY GLY ILE GLN THR SEQRES 7 A 348 VAL ASP GLN LEU ILE LYS GLU LEU PRO GLU LEU LEU GLN SEQRES 8 A 348 ARG ASN ARG GLU ILE LEU ASP GLU SER LEU ARG LEU LEU SEQRES 9 A 348 ASP GLU GLU GLU ALA THR ASP ASN ASP LEU ARG ALA LYS SEQRES 10 A 348 PHE LYS GLU ARG TRP GLN ARG THR PRO SER ASN GLU LEU SEQRES 11 A 348 TYR LYS PRO LEU ARG ALA GLU GLY THR ASN PHE ARG THR SEQRES 12 A 348 VAL LEU ASP LYS ALA VAL GLN ALA ASP GLY GLN VAL LYS SEQRES 13 A 348 GLU CYS TYR GLN SER HIS ARG ASP THR ILE VAL LEU LEU SEQRES 14 A 348 CYS LYS PRO GLU PRO GLU LEU ASN ALA ALA ILE PRO SER SEQRES 15 A 348 ALA ASN PRO ALA LYS THR MSE GLN GLY SER GLU VAL VAL SEQRES 16 A 348 SER VAL LEU LYS SER LEU LEU SER ASN LEU ASP GLU VAL SEQRES 17 A 348 LYS LYS GLU ARG GLU GLY LEU GLU ASN ASP LEU LYS SER SEQRES 18 A 348 VAL ASN PHE ASP MSE THR SER LYS PHE LEU THR ALA LEU SEQRES 19 A 348 ALA GLN ASP GLY VAL ILE ASN GLU GLU ALA LEU SER VAL SEQRES 20 A 348 THR GLU LEU ASP ARG VAL TYR GLY GLY LEU THR THR LYS SEQRES 21 A 348 VAL GLN GLU SER LEU LYS LYS GLN GLU GLY LEU LEU LYS SEQRES 22 A 348 ASN ILE GLN VAL SER HIS GLN GLU PHE SER LYS MSE LYS SEQRES 23 A 348 GLN SER ASN ASN GLU ALA ASN LEU ARG GLU GLU VAL LEU SEQRES 24 A 348 LYS ASN LEU ALA THR ALA TYR ASP ASN PHE VAL GLU LEU SEQRES 25 A 348 VAL ALA ASN LEU LYS GLU GLY THR LYS PHE TYR ASN GLU SEQRES 26 A 348 LEU THR GLU ILE LEU VAL ARG PHE GLN ASN LYS CYS SER SEQRES 27 A 348 ASP ILE VAL PHE ALA ARG LYS THR GLU ARG MODRES 2OJQ MSE A 385 MET SELENOMETHIONINE MODRES 2OJQ MSE A 543 MET SELENOMETHIONINE MODRES 2OJQ MSE A 580 MET SELENOMETHIONINE MODRES 2OJQ MSE A 639 MET SELENOMETHIONINE HET MSE A 385 8 HET MSE A 543 8 HET MSE A 580 8 HET MSE A 639 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 4(C5 H11 N O2 SE) HELIX 1 1 SER A 362 LEU A 399 1 38 HELIX 2 2 ASN A 400 GLU A 406 1 7 HELIX 3 3 ASP A 407 SER A 409 5 3 HELIX 4 4 ILE A 417 GLY A 428 1 12 HELIX 5 5 GLY A 429 PHE A 472 1 44 HELIX 6 6 PRO A 480 TYR A 485 1 6 HELIX 7 7 TYR A 485 ARG A 517 1 33 HELIX 8 8 ARG A 517 LEU A 522 1 6 HELIX 9 9 GLU A 527 ALA A 532 1 6 HELIX 10 10 SER A 546 VAL A 576 1 31 HELIX 11 11 MSE A 580 ALA A 589 1 10 HELIX 12 12 ASN A 595 GLU A 635 1 41 HELIX 13 13 ASN A 644 THR A 700 1 57 LINK C GLN A 384 N MSE A 385 1555 1555 1.33 LINK C MSE A 385 N ARG A 386 1555 1555 1.33 LINK C THR A 542 N MSE A 543 1555 1555 1.33 LINK C MSE A 543 N GLN A 544 1555 1555 1.33 LINK C ASP A 579 N MSE A 580 1555 1555 1.33 LINK C MSE A 580 N THR A 581 1555 1555 1.32 LINK C LYS A 638 N MSE A 639 1555 1555 1.33 LINK C MSE A 639 N LYS A 640 1555 1555 1.34 CRYST1 37.650 55.380 113.166 90.00 92.37 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.026560 0.000000 0.001099 0.00000 SCALE2 0.000000 0.018057 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008844 0.00000