data_2OM3
# 
_entry.id   2OM3 
# 
_audit_conform.dict_name       mmcif_pdbx.dic 
_audit_conform.dict_version    5.383 
_audit_conform.dict_location   http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 
# 
loop_
_database_2.database_id 
_database_2.database_code 
_database_2.pdbx_database_accession 
_database_2.pdbx_DOI 
PDB   2OM3         pdb_00002om3 10.2210/pdb2om3/pdb 
RCSB  RCSB041305   ?            ?                   
WWPDB D_1000041305 ?            ?                   
# 
loop_
_pdbx_audit_revision_history.ordinal 
_pdbx_audit_revision_history.data_content_type 
_pdbx_audit_revision_history.major_revision 
_pdbx_audit_revision_history.minor_revision 
_pdbx_audit_revision_history.revision_date 
1 'Structure model' 1 0 2007-10-16 
2 'Structure model' 1 1 2011-07-13 
3 'Structure model' 1 2 2018-07-18 
4 'Structure model' 1 3 2019-12-18 
5 'Structure model' 1 4 2023-12-27 
# 
_pdbx_audit_revision_details.ordinal             1 
_pdbx_audit_revision_details.revision_ordinal    1 
_pdbx_audit_revision_details.data_content_type   'Structure model' 
_pdbx_audit_revision_details.provider            repository 
_pdbx_audit_revision_details.type                'Initial release' 
_pdbx_audit_revision_details.description         ? 
_pdbx_audit_revision_details.details             ? 
# 
loop_
_pdbx_audit_revision_group.ordinal 
_pdbx_audit_revision_group.revision_ordinal 
_pdbx_audit_revision_group.data_content_type 
_pdbx_audit_revision_group.group 
1 2 'Structure model' 'Version format compliance'  
2 3 'Structure model' 'Author supporting evidence' 
3 3 'Structure model' 'Data collection'            
4 4 'Structure model' Other                        
5 5 'Structure model' 'Data collection'            
6 5 'Structure model' 'Database references'        
7 5 'Structure model' 'Derived calculations'       
8 5 'Structure model' 'Refinement description'     
# 
loop_
_pdbx_audit_revision_category.ordinal 
_pdbx_audit_revision_category.revision_ordinal 
_pdbx_audit_revision_category.data_content_type 
_pdbx_audit_revision_category.category 
1  3 'Structure model' em_single_particle_entity     
2  3 'Structure model' em_software                   
3  4 'Structure model' atom_sites                    
4  4 'Structure model' cell                          
5  5 'Structure model' chem_comp_atom                
6  5 'Structure model' chem_comp_bond                
7  5 'Structure model' database_2                    
8  5 'Structure model' em_3d_fitting_list            
9  5 'Structure model' pdbx_initial_refinement_model 
10 5 'Structure model' pdbx_struct_oper_list         
# 
loop_
_pdbx_audit_revision_item.ordinal 
_pdbx_audit_revision_item.revision_ordinal 
_pdbx_audit_revision_item.data_content_type 
_pdbx_audit_revision_item.item 
1  3 'Structure model' '_em_software.image_processing_id'                
2  4 'Structure model' '_atom_sites.fract_transf_matrix[1][1]'           
3  4 'Structure model' '_atom_sites.fract_transf_matrix[2][2]'           
4  4 'Structure model' '_atom_sites.fract_transf_matrix[3][3]'           
5  4 'Structure model' '_cell.length_a'                                  
6  4 'Structure model' '_cell.length_b'                                  
7  4 'Structure model' '_cell.length_c'                                  
8  5 'Structure model' '_database_2.pdbx_DOI'                            
9  5 'Structure model' '_database_2.pdbx_database_accession'             
10 5 'Structure model' '_em_3d_fitting_list.accession_code'              
11 5 'Structure model' '_em_3d_fitting_list.initial_refinement_model_id' 
12 5 'Structure model' '_em_3d_fitting_list.source_name'                 
13 5 'Structure model' '_em_3d_fitting_list.type'                        
14 5 'Structure model' '_pdbx_struct_oper_list.name'                     
15 5 'Structure model' '_pdbx_struct_oper_list.symmetry_operation'       
16 5 'Structure model' '_pdbx_struct_oper_list.type'                     
# 
_pdbx_database_status.status_code                     REL 
_pdbx_database_status.entry_id                        2OM3 
_pdbx_database_status.recvd_initial_deposition_date   2007-01-20 
_pdbx_database_status.deposit_site                    RCSB 
_pdbx_database_status.process_site                    RCSB 
_pdbx_database_status.status_code_sf                  ? 
_pdbx_database_status.status_code_mr                  ? 
_pdbx_database_status.SG_entry                        ? 
_pdbx_database_status.pdb_format_compatible           Y 
_pdbx_database_status.status_code_cs                  ? 
_pdbx_database_status.methods_development_category    ? 
_pdbx_database_status.status_code_nmr_data            ? 
# 
loop_
_pdbx_database_related.db_name 
_pdbx_database_related.db_id 
_pdbx_database_related.details 
_pdbx_database_related.content_type 
PDB  2tmv     'The same protein/RNA complex resolved by X-ray fiber diffraction'         unspecified            
PDB  1ei7     'Structure of the RNA-free disk protein resolved by X-ray crystallography' unspecified            
EMDB EMD-1316 .                                                                          'associated EM volume' 
# 
_audit_author.name           'Sachse, C.' 
_audit_author.pdbx_ordinal   1 
# 
_citation.id                        primary 
_citation.title                     
'High-resolution electron microscopy of helical specimens: a fresh look at tobacco mosaic virus.' 
_citation.journal_abbrev            J.Mol.Biol. 
_citation.journal_volume            371 
_citation.page_first                812 
_citation.page_last                 835 
_citation.year                      2007 
_citation.journal_id_ASTM           JMOBAK 
_citation.country                   UK 
_citation.journal_id_ISSN           0022-2836 
_citation.journal_id_CSD            0070 
_citation.book_publisher            ? 
_citation.pdbx_database_id_PubMed   17585939 
_citation.pdbx_database_id_DOI      10.1016/j.jmb.2007.05.088 
# 
loop_
_citation_author.citation_id 
_citation_author.name 
_citation_author.ordinal 
_citation_author.identifier_ORCID 
primary 'Sachse, C.'     1 ? 
primary 'Chen, J.Z.'     2 ? 
primary 'Coureux, P.D.'  3 ? 
primary 'Stroupe, M.E.'  4 ? 
primary 'Fandrich, M.'   5 ? 
primary 'Grigorieff, N.' 6 ? 
# 
loop_
_entity.id 
_entity.type 
_entity.src_method 
_entity.pdbx_description 
_entity.formula_weight 
_entity.pdbx_number_of_molecules 
_entity.pdbx_ec 
_entity.pdbx_mutation 
_entity.pdbx_fragment 
_entity.details 
1 polymer syn 'Tobacco Mosaic Virus RNA' 958.660   1 ? ? ? ? 
2 polymer nat 'Coat protein'             17505.426 1 ? ? ? ? 
# 
_entity_name_com.entity_id   2 
_entity_name_com.name        'Capsid protein' 
# 
loop_
_entity_poly.entity_id 
_entity_poly.type 
_entity_poly.nstd_linkage 
_entity_poly.nstd_monomer 
_entity_poly.pdbx_seq_one_letter_code 
_entity_poly.pdbx_seq_one_letter_code_can 
_entity_poly.pdbx_strand_id 
_entity_poly.pdbx_target_identifier 
1 polyribonucleotide no no GAA GAA R ? 
2 'polypeptide(L)'   no no 
;SYSITTPSQFVFLSSAWADPIELINLCTNALGNQFQTQQARTVVQRQFSEVWKPSPQVTVRFPDSDFKVYRYNAVLDPLV
TALLGAFDTRNRIIEVENQANPTTAETLDATRRVDDATVAIRSAINNLIVELIRGTGSYNRSSFESSSGLVWTSGPAT
;
;SYSITTPSQFVFLSSAWADPIELINLCTNALGNQFQTQQARTVVQRQFSEVWKPSPQVTVRFPDSDFKVYRYNAVLDPLV
TALLGAFDTRNRIIEVENQANPTTAETLDATRRVDDATVAIRSAINNLIVELIRGTGSYNRSSFESSSGLVWTSGPAT
;
A ? 
# 
loop_
_entity_poly_seq.entity_id 
_entity_poly_seq.num 
_entity_poly_seq.mon_id 
_entity_poly_seq.hetero 
1 1   G   n 
1 2   A   n 
1 3   A   n 
2 1   SER n 
2 2   TYR n 
2 3   SER n 
2 4   ILE n 
2 5   THR n 
2 6   THR n 
2 7   PRO n 
2 8   SER n 
2 9   GLN n 
2 10  PHE n 
2 11  VAL n 
2 12  PHE n 
2 13  LEU n 
2 14  SER n 
2 15  SER n 
2 16  ALA n 
2 17  TRP n 
2 18  ALA n 
2 19  ASP n 
2 20  PRO n 
2 21  ILE n 
2 22  GLU n 
2 23  LEU n 
2 24  ILE n 
2 25  ASN n 
2 26  LEU n 
2 27  CYS n 
2 28  THR n 
2 29  ASN n 
2 30  ALA n 
2 31  LEU n 
2 32  GLY n 
2 33  ASN n 
2 34  GLN n 
2 35  PHE n 
2 36  GLN n 
2 37  THR n 
2 38  GLN n 
2 39  GLN n 
2 40  ALA n 
2 41  ARG n 
2 42  THR n 
2 43  VAL n 
2 44  VAL n 
2 45  GLN n 
2 46  ARG n 
2 47  GLN n 
2 48  PHE n 
2 49  SER n 
2 50  GLU n 
2 51  VAL n 
2 52  TRP n 
2 53  LYS n 
2 54  PRO n 
2 55  SER n 
2 56  PRO n 
2 57  GLN n 
2 58  VAL n 
2 59  THR n 
2 60  VAL n 
2 61  ARG n 
2 62  PHE n 
2 63  PRO n 
2 64  ASP n 
2 65  SER n 
2 66  ASP n 
2 67  PHE n 
2 68  LYS n 
2 69  VAL n 
2 70  TYR n 
2 71  ARG n 
2 72  TYR n 
2 73  ASN n 
2 74  ALA n 
2 75  VAL n 
2 76  LEU n 
2 77  ASP n 
2 78  PRO n 
2 79  LEU n 
2 80  VAL n 
2 81  THR n 
2 82  ALA n 
2 83  LEU n 
2 84  LEU n 
2 85  GLY n 
2 86  ALA n 
2 87  PHE n 
2 88  ASP n 
2 89  THR n 
2 90  ARG n 
2 91  ASN n 
2 92  ARG n 
2 93  ILE n 
2 94  ILE n 
2 95  GLU n 
2 96  VAL n 
2 97  GLU n 
2 98  ASN n 
2 99  GLN n 
2 100 ALA n 
2 101 ASN n 
2 102 PRO n 
2 103 THR n 
2 104 THR n 
2 105 ALA n 
2 106 GLU n 
2 107 THR n 
2 108 LEU n 
2 109 ASP n 
2 110 ALA n 
2 111 THR n 
2 112 ARG n 
2 113 ARG n 
2 114 VAL n 
2 115 ASP n 
2 116 ASP n 
2 117 ALA n 
2 118 THR n 
2 119 VAL n 
2 120 ALA n 
2 121 ILE n 
2 122 ARG n 
2 123 SER n 
2 124 ALA n 
2 125 ILE n 
2 126 ASN n 
2 127 ASN n 
2 128 LEU n 
2 129 ILE n 
2 130 VAL n 
2 131 GLU n 
2 132 LEU n 
2 133 ILE n 
2 134 ARG n 
2 135 GLY n 
2 136 THR n 
2 137 GLY n 
2 138 SER n 
2 139 TYR n 
2 140 ASN n 
2 141 ARG n 
2 142 SER n 
2 143 SER n 
2 144 PHE n 
2 145 GLU n 
2 146 SER n 
2 147 SER n 
2 148 SER n 
2 149 GLY n 
2 150 LEU n 
2 151 VAL n 
2 152 TRP n 
2 153 THR n 
2 154 SER n 
2 155 GLY n 
2 156 PRO n 
2 157 ALA n 
2 158 THR n 
# 
_entity_src_nat.entity_id                  2 
_entity_src_nat.pdbx_src_id                1 
_entity_src_nat.pdbx_alt_source_flag       sample 
_entity_src_nat.pdbx_beg_seq_num           ? 
_entity_src_nat.pdbx_end_seq_num           ? 
_entity_src_nat.common_name                ? 
_entity_src_nat.pdbx_organism_scientific   'Tobacco mosaic virus' 
_entity_src_nat.pdbx_ncbi_taxonomy_id      12242 
_entity_src_nat.genus                      Tobamovirus 
_entity_src_nat.species                    ? 
_entity_src_nat.strain                     ? 
_entity_src_nat.tissue                     ? 
_entity_src_nat.tissue_fraction            ? 
_entity_src_nat.pdbx_secretion             ? 
_entity_src_nat.pdbx_fragment              ? 
_entity_src_nat.pdbx_variant               ? 
_entity_src_nat.pdbx_cell_line             ? 
_entity_src_nat.pdbx_atcc                  ? 
_entity_src_nat.pdbx_cellular_location     ? 
_entity_src_nat.pdbx_organ                 ? 
_entity_src_nat.pdbx_organelle             ? 
_entity_src_nat.pdbx_cell                  ? 
_entity_src_nat.pdbx_plasmid_name          ? 
_entity_src_nat.pdbx_plasmid_details       ? 
_entity_src_nat.details                    ? 
# 
loop_
_chem_comp.id 
_chem_comp.type 
_chem_comp.mon_nstd_flag 
_chem_comp.name 
_chem_comp.pdbx_synonyms 
_chem_comp.formula 
_chem_comp.formula_weight 
A   'RNA linking'       y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 
ALA 'L-peptide linking' y ALANINE                      ? 'C3 H7 N O2'      89.093  
ARG 'L-peptide linking' y ARGININE                     ? 'C6 H15 N4 O2 1'  175.209 
ASN 'L-peptide linking' y ASPARAGINE                   ? 'C4 H8 N2 O3'     132.118 
ASP 'L-peptide linking' y 'ASPARTIC ACID'              ? 'C4 H7 N O4'      133.103 
CYS 'L-peptide linking' y CYSTEINE                     ? 'C3 H7 N O2 S'    121.158 
G   'RNA linking'       y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 
GLN 'L-peptide linking' y GLUTAMINE                    ? 'C5 H10 N2 O3'    146.144 
GLU 'L-peptide linking' y 'GLUTAMIC ACID'              ? 'C5 H9 N O4'      147.129 
GLY 'peptide linking'   y GLYCINE                      ? 'C2 H5 N O2'      75.067  
ILE 'L-peptide linking' y ISOLEUCINE                   ? 'C6 H13 N O2'     131.173 
LEU 'L-peptide linking' y LEUCINE                      ? 'C6 H13 N O2'     131.173 
LYS 'L-peptide linking' y LYSINE                       ? 'C6 H15 N2 O2 1'  147.195 
PHE 'L-peptide linking' y PHENYLALANINE                ? 'C9 H11 N O2'     165.189 
PRO 'L-peptide linking' y PROLINE                      ? 'C5 H9 N O2'      115.130 
SER 'L-peptide linking' y SERINE                       ? 'C3 H7 N O3'      105.093 
THR 'L-peptide linking' y THREONINE                    ? 'C4 H9 N O3'      119.119 
TRP 'L-peptide linking' y TRYPTOPHAN                   ? 'C11 H12 N2 O2'   204.225 
TYR 'L-peptide linking' y TYROSINE                     ? 'C9 H11 N O3'     181.189 
VAL 'L-peptide linking' y VALINE                       ? 'C5 H11 N O2'     117.146 
# 
loop_
_pdbx_poly_seq_scheme.asym_id 
_pdbx_poly_seq_scheme.entity_id 
_pdbx_poly_seq_scheme.seq_id 
_pdbx_poly_seq_scheme.mon_id 
_pdbx_poly_seq_scheme.ndb_seq_num 
_pdbx_poly_seq_scheme.pdb_seq_num 
_pdbx_poly_seq_scheme.auth_seq_num 
_pdbx_poly_seq_scheme.pdb_mon_id 
_pdbx_poly_seq_scheme.auth_mon_id 
_pdbx_poly_seq_scheme.pdb_strand_id 
_pdbx_poly_seq_scheme.pdb_ins_code 
_pdbx_poly_seq_scheme.hetero 
A 1 1   G   1   4   4   G   G   R . n 
A 1 2   A   2   5   5   A   A   R . n 
A 1 3   A   3   6   6   A   A   R . n 
B 2 1   SER 1   1   1   SER SER A . n 
B 2 2   TYR 2   2   2   TYR TYR A . n 
B 2 3   SER 3   3   3   SER SER A . n 
B 2 4   ILE 4   4   4   ILE ILE A . n 
B 2 5   THR 5   5   5   THR THR A . n 
B 2 6   THR 6   6   6   THR THR A . n 
B 2 7   PRO 7   7   7   PRO PRO A . n 
B 2 8   SER 8   8   8   SER SER A . n 
B 2 9   GLN 9   9   9   GLN GLN A . n 
B 2 10  PHE 10  10  10  PHE PHE A . n 
B 2 11  VAL 11  11  11  VAL VAL A . n 
B 2 12  PHE 12  12  12  PHE PHE A . n 
B 2 13  LEU 13  13  13  LEU LEU A . n 
B 2 14  SER 14  14  14  SER SER A . n 
B 2 15  SER 15  15  15  SER SER A . n 
B 2 16  ALA 16  16  16  ALA ALA A . n 
B 2 17  TRP 17  17  17  TRP TRP A . n 
B 2 18  ALA 18  18  18  ALA ALA A . n 
B 2 19  ASP 19  19  19  ASP ASP A . n 
B 2 20  PRO 20  20  20  PRO PRO A . n 
B 2 21  ILE 21  21  21  ILE ILE A . n 
B 2 22  GLU 22  22  22  GLU GLU A . n 
B 2 23  LEU 23  23  23  LEU LEU A . n 
B 2 24  ILE 24  24  24  ILE ILE A . n 
B 2 25  ASN 25  25  25  ASN ASN A . n 
B 2 26  LEU 26  26  26  LEU LEU A . n 
B 2 27  CYS 27  27  27  CYS CYS A . n 
B 2 28  THR 28  28  28  THR THR A . n 
B 2 29  ASN 29  29  29  ASN ASN A . n 
B 2 30  ALA 30  30  30  ALA ALA A . n 
B 2 31  LEU 31  31  31  LEU LEU A . n 
B 2 32  GLY 32  32  32  GLY GLY A . n 
B 2 33  ASN 33  33  33  ASN ASN A . n 
B 2 34  GLN 34  34  34  GLN GLN A . n 
B 2 35  PHE 35  35  35  PHE PHE A . n 
B 2 36  GLN 36  36  36  GLN GLN A . n 
B 2 37  THR 37  37  37  THR THR A . n 
B 2 38  GLN 38  38  38  GLN GLN A . n 
B 2 39  GLN 39  39  39  GLN GLN A . n 
B 2 40  ALA 40  40  40  ALA ALA A . n 
B 2 41  ARG 41  41  41  ARG ARG A . n 
B 2 42  THR 42  42  42  THR THR A . n 
B 2 43  VAL 43  43  43  VAL VAL A . n 
B 2 44  VAL 44  44  44  VAL VAL A . n 
B 2 45  GLN 45  45  45  GLN GLN A . n 
B 2 46  ARG 46  46  46  ARG ARG A . n 
B 2 47  GLN 47  47  47  GLN GLN A . n 
B 2 48  PHE 48  48  48  PHE PHE A . n 
B 2 49  SER 49  49  49  SER SER A . n 
B 2 50  GLU 50  50  50  GLU GLU A . n 
B 2 51  VAL 51  51  51  VAL VAL A . n 
B 2 52  TRP 52  52  52  TRP TRP A . n 
B 2 53  LYS 53  53  53  LYS LYS A . n 
B 2 54  PRO 54  54  54  PRO PRO A . n 
B 2 55  SER 55  55  55  SER SER A . n 
B 2 56  PRO 56  56  56  PRO PRO A . n 
B 2 57  GLN 57  57  57  GLN GLN A . n 
B 2 58  VAL 58  58  58  VAL VAL A . n 
B 2 59  THR 59  59  59  THR THR A . n 
B 2 60  VAL 60  60  60  VAL VAL A . n 
B 2 61  ARG 61  61  61  ARG ARG A . n 
B 2 62  PHE 62  62  62  PHE PHE A . n 
B 2 63  PRO 63  63  63  PRO PRO A . n 
B 2 64  ASP 64  64  64  ASP ASP A . n 
B 2 65  SER 65  65  65  SER SER A . n 
B 2 66  ASP 66  66  66  ASP ASP A . n 
B 2 67  PHE 67  67  67  PHE PHE A . n 
B 2 68  LYS 68  68  68  LYS LYS A . n 
B 2 69  VAL 69  69  69  VAL VAL A . n 
B 2 70  TYR 70  70  70  TYR TYR A . n 
B 2 71  ARG 71  71  71  ARG ARG A . n 
B 2 72  TYR 72  72  72  TYR TYR A . n 
B 2 73  ASN 73  73  73  ASN ASN A . n 
B 2 74  ALA 74  74  74  ALA ALA A . n 
B 2 75  VAL 75  75  75  VAL VAL A . n 
B 2 76  LEU 76  76  76  LEU LEU A . n 
B 2 77  ASP 77  77  77  ASP ASP A . n 
B 2 78  PRO 78  78  78  PRO PRO A . n 
B 2 79  LEU 79  79  79  LEU LEU A . n 
B 2 80  VAL 80  80  80  VAL VAL A . n 
B 2 81  THR 81  81  81  THR THR A . n 
B 2 82  ALA 82  82  82  ALA ALA A . n 
B 2 83  LEU 83  83  83  LEU LEU A . n 
B 2 84  LEU 84  84  84  LEU LEU A . n 
B 2 85  GLY 85  85  85  GLY GLY A . n 
B 2 86  ALA 86  86  86  ALA ALA A . n 
B 2 87  PHE 87  87  87  PHE PHE A . n 
B 2 88  ASP 88  88  88  ASP ASP A . n 
B 2 89  THR 89  89  89  THR THR A . n 
B 2 90  ARG 90  90  90  ARG ARG A . n 
B 2 91  ASN 91  91  91  ASN ASN A . n 
B 2 92  ARG 92  92  92  ARG ARG A . n 
B 2 93  ILE 93  93  93  ILE ILE A . n 
B 2 94  ILE 94  94  94  ILE ILE A . n 
B 2 95  GLU 95  95  95  GLU GLU A . n 
B 2 96  VAL 96  96  96  VAL VAL A . n 
B 2 97  GLU 97  97  97  GLU GLU A . n 
B 2 98  ASN 98  98  98  ASN ASN A . n 
B 2 99  GLN 99  99  99  GLN GLN A . n 
B 2 100 ALA 100 100 100 ALA ALA A . n 
B 2 101 ASN 101 101 101 ASN ASN A . n 
B 2 102 PRO 102 102 102 PRO PRO A . n 
B 2 103 THR 103 103 103 THR THR A . n 
B 2 104 THR 104 104 104 THR THR A . n 
B 2 105 ALA 105 105 105 ALA ALA A . n 
B 2 106 GLU 106 106 106 GLU GLU A . n 
B 2 107 THR 107 107 107 THR THR A . n 
B 2 108 LEU 108 108 108 LEU LEU A . n 
B 2 109 ASP 109 109 109 ASP ASP A . n 
B 2 110 ALA 110 110 110 ALA ALA A . n 
B 2 111 THR 111 111 111 THR THR A . n 
B 2 112 ARG 112 112 112 ARG ARG A . n 
B 2 113 ARG 113 113 113 ARG ARG A . n 
B 2 114 VAL 114 114 114 VAL VAL A . n 
B 2 115 ASP 115 115 115 ASP ASP A . n 
B 2 116 ASP 116 116 116 ASP ASP A . n 
B 2 117 ALA 117 117 117 ALA ALA A . n 
B 2 118 THR 118 118 118 THR THR A . n 
B 2 119 VAL 119 119 119 VAL VAL A . n 
B 2 120 ALA 120 120 120 ALA ALA A . n 
B 2 121 ILE 121 121 121 ILE ILE A . n 
B 2 122 ARG 122 122 122 ARG ARG A . n 
B 2 123 SER 123 123 123 SER SER A . n 
B 2 124 ALA 124 124 124 ALA ALA A . n 
B 2 125 ILE 125 125 125 ILE ILE A . n 
B 2 126 ASN 126 126 126 ASN ASN A . n 
B 2 127 ASN 127 127 127 ASN ASN A . n 
B 2 128 LEU 128 128 128 LEU LEU A . n 
B 2 129 ILE 129 129 129 ILE ILE A . n 
B 2 130 VAL 130 130 130 VAL VAL A . n 
B 2 131 GLU 131 131 131 GLU GLU A . n 
B 2 132 LEU 132 132 132 LEU LEU A . n 
B 2 133 ILE 133 133 133 ILE ILE A . n 
B 2 134 ARG 134 134 134 ARG ARG A . n 
B 2 135 GLY 135 135 135 GLY GLY A . n 
B 2 136 THR 136 136 136 THR THR A . n 
B 2 137 GLY 137 137 137 GLY GLY A . n 
B 2 138 SER 138 138 138 SER SER A . n 
B 2 139 TYR 139 139 139 TYR TYR A . n 
B 2 140 ASN 140 140 140 ASN ASN A . n 
B 2 141 ARG 141 141 141 ARG ARG A . n 
B 2 142 SER 142 142 142 SER SER A . n 
B 2 143 SER 143 143 143 SER SER A . n 
B 2 144 PHE 144 144 144 PHE PHE A . n 
B 2 145 GLU 145 145 145 GLU GLU A . n 
B 2 146 SER 146 146 146 SER SER A . n 
B 2 147 SER 147 147 147 SER SER A . n 
B 2 148 SER 148 148 148 SER SER A . n 
B 2 149 GLY 149 149 149 GLY GLY A . n 
B 2 150 LEU 150 150 150 LEU LEU A . n 
B 2 151 VAL 151 151 151 VAL VAL A . n 
B 2 152 TRP 152 152 152 TRP TRP A . n 
B 2 153 THR 153 153 153 THR THR A . n 
B 2 154 SER 154 154 154 SER SER A . n 
B 2 155 GLY 155 155 ?   ?   ?   A . n 
B 2 156 PRO 156 156 ?   ?   ?   A . n 
B 2 157 ALA 157 157 ?   ?   ?   A . n 
B 2 158 THR 158 158 ?   ?   ?   A . n 
# 
_cell.entry_id           2OM3 
_cell.length_a           1.0 
_cell.length_b           1.0 
_cell.length_c           1.0 
_cell.angle_alpha        90.0 
_cell.angle_beta         90.0 
_cell.angle_gamma        90.0 
_cell.Z_PDB              1 
_cell.pdbx_unique_axis   ? 
_cell.length_a_esd       ? 
_cell.length_b_esd       ? 
_cell.length_c_esd       ? 
_cell.angle_alpha_esd    ? 
_cell.angle_beta_esd     ? 
_cell.angle_gamma_esd    ? 
# 
_symmetry.entry_id                         2OM3 
_symmetry.space_group_name_H-M             'P 1' 
_symmetry.pdbx_full_space_group_name_H-M   ? 
_symmetry.cell_setting                     ? 
_symmetry.Int_Tables_number                1 
# 
_exptl.entry_id          2OM3 
_exptl.method            'ELECTRON MICROSCOPY' 
_exptl.crystals_number   ? 
# 
_exptl_crystal.id                    1 
_exptl_crystal.density_meas          ? 
_exptl_crystal.density_Matthews      ? 
_exptl_crystal.density_percent_sol   ? 
_exptl_crystal.description           ? 
# 
_diffrn.id                     1 
_diffrn.ambient_temp           ? 
_diffrn.ambient_temp_details   ? 
_diffrn.crystal_id             1 
# 
_diffrn_radiation.diffrn_id                        1 
_diffrn_radiation.wavelength_id                    1 
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l   M 
_diffrn_radiation.monochromator                    ? 
_diffrn_radiation.pdbx_diffrn_protocol             'SINGLE WAVELENGTH' 
_diffrn_radiation.pdbx_scattering_type             ? 
# 
_diffrn_radiation_wavelength.id           1 
_diffrn_radiation_wavelength.wavelength   . 
_diffrn_radiation_wavelength.wt           1.0 
# 
_refine_hist.pdbx_refine_id                   'ELECTRON MICROSCOPY' 
_refine_hist.cycle_id                         LAST 
_refine_hist.pdbx_number_atoms_protein        1212 
_refine_hist.pdbx_number_atoms_nucleic_acid   67 
_refine_hist.pdbx_number_atoms_ligand         0 
_refine_hist.number_atoms_solvent             0 
_refine_hist.number_atoms_total               1279 
_refine_hist.d_res_high                       . 
_refine_hist.d_res_low                        . 
# 
_database_PDB_matrix.entry_id          2OM3 
_database_PDB_matrix.origx[1][1]       1.000000 
_database_PDB_matrix.origx[1][2]       0.000000 
_database_PDB_matrix.origx[1][3]       0.000000 
_database_PDB_matrix.origx[2][1]       0.000000 
_database_PDB_matrix.origx[2][2]       1.000000 
_database_PDB_matrix.origx[2][3]       0.000000 
_database_PDB_matrix.origx[3][1]       0.000000 
_database_PDB_matrix.origx[3][2]       0.000000 
_database_PDB_matrix.origx[3][3]       1.000000 
_database_PDB_matrix.origx_vector[1]   0.00000 
_database_PDB_matrix.origx_vector[2]   0.00000 
_database_PDB_matrix.origx_vector[3]   0.00000 
# 
_struct.entry_id                  2OM3 
_struct.title                     'High-resolution cryo-EM structure of Tobacco Mosaic Virus' 
_struct.pdbx_model_details        ? 
_struct.pdbx_CASP_flag            ? 
_struct.pdbx_model_type_details   ? 
# 
_struct_keywords.entry_id        2OM3 
_struct_keywords.pdbx_keywords   VIRUS 
_struct_keywords.text            'protein-RNA complex, four-helical up-and-down bundle, HELICAL VIRUS, VIRUS' 
# 
loop_
_struct_asym.id 
_struct_asym.pdbx_blank_PDB_chainid_flag 
_struct_asym.pdbx_modified 
_struct_asym.entity_id 
_struct_asym.details 
A N N 1 ? 
B N N 2 ? 
# 
loop_
_struct_ref.id 
_struct_ref.db_name 
_struct_ref.db_code 
_struct_ref.pdbx_db_accession 
_struct_ref.entity_id 
_struct_ref.pdbx_seq_one_letter_code 
_struct_ref.pdbx_align_begin 
_struct_ref.pdbx_db_isoform 
1 UNP Q77LT8_9VIRU Q77LT8 2 
;SYSITTPSQFVFLSSAWADPIELINLCTNALGNQFQTQQARTVVQRQFSEVWKPSPQVTVRFPDSDFKVYRYNAVLDPLV
TALLGAFDTRNRIIEVENQANPTTAETLDATRRVDDATVAIRSAINNLIVELIRGTGSYNRSSFESSSGLVWTSGPAT
;
2 ? 
2 PDB 2OM3         2OM3   1 ? ? ? 
# 
loop_
_struct_ref_seq.align_id 
_struct_ref_seq.ref_id 
_struct_ref_seq.pdbx_PDB_id_code 
_struct_ref_seq.pdbx_strand_id 
_struct_ref_seq.seq_align_beg 
_struct_ref_seq.pdbx_seq_align_beg_ins_code 
_struct_ref_seq.seq_align_end 
_struct_ref_seq.pdbx_seq_align_end_ins_code 
_struct_ref_seq.pdbx_db_accession 
_struct_ref_seq.db_align_beg 
_struct_ref_seq.pdbx_db_align_beg_ins_code 
_struct_ref_seq.db_align_end 
_struct_ref_seq.pdbx_db_align_end_ins_code 
_struct_ref_seq.pdbx_auth_seq_align_beg 
_struct_ref_seq.pdbx_auth_seq_align_end 
1 1 2OM3 A 1 ? 158 ? Q77LT8 2 ? 159 ? 1 158 
2 2 2OM3 R 1 ? 3   ? 2OM3   4 ? 6   ? 4 6   
# 
loop_
_pdbx_struct_assembly.id 
_pdbx_struct_assembly.details 
_pdbx_struct_assembly.method_details 
_pdbx_struct_assembly.oligomeric_details 
_pdbx_struct_assembly.oligomeric_count 
1 'representative helical assembly'            ? 98-meric 98 
2 'helical asymmetric unit'                    ? dimeric  2  
3 'helical asymmetric unit, std helical frame' ? dimeric  2  
# 
loop_
_pdbx_struct_assembly_gen.assembly_id 
_pdbx_struct_assembly_gen.oper_expression 
_pdbx_struct_assembly_gen.asym_id_list 
1 '(1-49)' A,B 
2 25       A,B 
3 H        A,B 
# 
loop_
_pdbx_struct_oper_list.id 
_pdbx_struct_oper_list.type 
_pdbx_struct_oper_list.name 
_pdbx_struct_oper_list.symmetry_operation 
_pdbx_struct_oper_list.matrix[1][1] 
_pdbx_struct_oper_list.matrix[1][2] 
_pdbx_struct_oper_list.matrix[1][3] 
_pdbx_struct_oper_list.vector[1] 
_pdbx_struct_oper_list.matrix[2][1] 
_pdbx_struct_oper_list.matrix[2][2] 
_pdbx_struct_oper_list.matrix[2][3] 
_pdbx_struct_oper_list.vector[2] 
_pdbx_struct_oper_list.matrix[3][1] 
_pdbx_struct_oper_list.matrix[3][2] 
_pdbx_struct_oper_list.matrix[3][3] 
_pdbx_struct_oper_list.vector[3] 
H  'identity operation'         1_555 x,y,z 1.00000000  0.00000000  0.00000000 0.00000 0.00000000  1.00000000  0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 0.00000   
1  'helical symmetry operation' ?     ?     -0.98083020 0.19486436  0.00000000 0.00000 -0.19486436 -0.98083020 0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 -33.78240 
2  'helical symmetry operation' ?     ?     -0.83610812 0.54856469  0.00000000 0.00000 -0.54856469 -0.83610812 0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 -32.37480 
3  'helical symmetry operation' ?     ?     -0.56927378 0.82214802  0.00000000 0.00000 -0.82214802 -0.56927378 0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 -30.96720 
4  'helical symmetry operation' ?     ?     -0.21929792 0.97565794  0.00000000 0.00000 -0.97565794 -0.21929792 0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 -29.55960 
5  'helical symmetry operation' ?     ?     0.16270605  0.98667459  0.00000000 0.00000 -0.98667459 0.16270605  0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 -28.15200 
6  'helical symmetry operation' ?     ?     0.52094706  0.85358899  0.00000000 0.00000 -0.85358899 0.52094706  0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 -26.74440 
7  'helical symmetry operation' ?     ?     0.80310459  0.59583808  0.00000000 0.00000 -0.59583808 0.80310459  0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 -25.33680 
8  'helical symmetry operation' ?     ?     0.96796998  0.25106597  0.00000000 0.00000 -0.25106597 0.96796998  0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 -23.92920 
9  'helical symmetry operation' ?     ?     0.99146490  -0.13037392 0.00000000 0.00000 0.13037392  0.99146490  0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 -22.52160 
10 'helical symmetry operation' ?     ?     0.87015795  -0.49277290 0.00000000 0.00000 0.49277290  0.87015795  0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 -21.11400 
11 'helical symmetry operation' ?     ?     0.62176583  -0.78320320 0.00000000 0.00000 0.78320320  0.62176583  0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 -19.70640 
12 'helical symmetry operation' ?     ?     0.28256581  -0.95924792 0.00000000 0.00000 0.95924792  0.28256581  0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 -18.29880 
13 'helical symmetry operation' ?     ?     -0.09790250 -0.99519601 0.00000000 0.00000 0.99519601  -0.09790250 0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 -16.89120 
14 'helical symmetry operation' ?     ?     -0.46407231 -0.88579732 0.00000000 0.00000 0.88579732  -0.46407231 0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 -15.48360 
15 'helical symmetry operation' ?     ?     -0.76246510 -0.64702935 0.00000000 0.00000 0.64702935  -0.76246510 0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 -14.07600 
16 'helical symmetry operation' ?     ?     -0.94950108 -0.31376377 0.00000000 0.00000 0.31376377  -0.94950108 0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 -12.66840 
17 'helical symmetry operation' ?     ?     -0.99786394 0.06532650  0.00000000 0.00000 -0.06532650 -0.99786394 0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 -11.26080 
18 'helical symmetry operation' ?     ?     -0.90049038 0.43487594  0.00000000 0.00000 -0.43487594 -0.90049038 0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 -9.85320  
19 'helical symmetry operation' ?     ?     -0.67160163 0.74091245  0.00000000 0.00000 -0.74091245 -0.67160163 0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 -8.44560  
20 'helical symmetry operation' ?     ?     -0.34462654 0.93873987  0.00000000 0.00000 -0.93873987 -0.34462654 0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 -7.03800  
21 'helical symmetry operation' ?     ?     0.03268071  0.99946584  0.00000000 0.00000 -0.99946584 0.03268071  0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 -5.63040  
22 'helical symmetry operation' ?     ?     0.40521499  0.91422143  0.00000000 0.00000 -0.91422143 0.40521499  0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 -4.22280  
23 'helical symmetry operation' ?     ?     0.71856827  0.69545643  0.00000000 0.00000 -0.69545643 0.71856827  0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 -2.81520  
24 'helical symmetry operation' ?     ?     0.92697580  0.37512114  0.00000000 0.00000 -0.37512114 0.92697580  0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 -1.40760  
25 'identity operation'         1_555 x,y,z 1.00000000  0.00000000  0.00000000 0.00000 0.00000000  1.00000000  0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 0.00000   
26 'helical symmetry operation' ?     ?     0.92697580  -0.37512114 0.00000000 0.00000 0.37512114  0.92697580  0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 1.40760   
27 'helical symmetry operation' ?     ?     0.71856827  -0.69545643 0.00000000 0.00000 0.69545643  0.71856827  0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 2.81520   
28 'helical symmetry operation' ?     ?     0.40521499  -0.91422143 0.00000000 0.00000 0.91422143  0.40521499  0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 4.22280   
29 'helical symmetry operation' ?     ?     0.03268071  -0.99946584 0.00000000 0.00000 0.99946584  0.03268071  0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 5.63040   
30 'helical symmetry operation' ?     ?     -0.34462654 -0.93873987 0.00000000 0.00000 0.93873987  -0.34462654 0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 7.03800   
31 'helical symmetry operation' ?     ?     -0.67160163 -0.74091245 0.00000000 0.00000 0.74091245  -0.67160163 0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 8.44560   
32 'helical symmetry operation' ?     ?     -0.90049038 -0.43487594 0.00000000 0.00000 0.43487594  -0.90049038 0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 9.85320   
33 'helical symmetry operation' ?     ?     -0.99786394 -0.06532650 0.00000000 0.00000 0.06532650  -0.99786394 0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 11.26080  
34 'helical symmetry operation' ?     ?     -0.94950108 0.31376377  0.00000000 0.00000 -0.31376377 -0.94950108 0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 12.66840  
35 'helical symmetry operation' ?     ?     -0.76246510 0.64702935  0.00000000 0.00000 -0.64702935 -0.76246510 0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 14.07600  
36 'helical symmetry operation' ?     ?     -0.46407231 0.88579732  0.00000000 0.00000 -0.88579732 -0.46407231 0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 15.48360  
37 'helical symmetry operation' ?     ?     -0.09790250 0.99519601  0.00000000 0.00000 -0.99519601 -0.09790250 0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 16.89120  
38 'helical symmetry operation' ?     ?     0.28256581  0.95924792  0.00000000 0.00000 -0.95924792 0.28256581  0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 18.29880  
39 'helical symmetry operation' ?     ?     0.62176583  0.78320320  0.00000000 0.00000 -0.78320320 0.62176583  0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 19.70640  
40 'helical symmetry operation' ?     ?     0.87015795  0.49277290  0.00000000 0.00000 -0.49277290 0.87015795  0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 21.11400  
41 'helical symmetry operation' ?     ?     0.99146490  0.13037392  0.00000000 0.00000 -0.13037392 0.99146490  0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 22.52160  
42 'helical symmetry operation' ?     ?     0.96796998  -0.25106597 0.00000000 0.00000 0.25106597  0.96796998  0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 23.92920  
43 'helical symmetry operation' ?     ?     0.80310459  -0.59583808 0.00000000 0.00000 0.59583808  0.80310459  0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 25.33680  
44 'helical symmetry operation' ?     ?     0.52094706  -0.85358899 0.00000000 0.00000 0.85358899  0.52094706  0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 26.74440  
45 'helical symmetry operation' ?     ?     0.16270605  -0.98667459 0.00000000 0.00000 0.98667459  0.16270605  0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 28.15200  
46 'helical symmetry operation' ?     ?     -0.21929792 -0.97565794 0.00000000 0.00000 0.97565794  -0.21929792 0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 29.55960  
47 'helical symmetry operation' ?     ?     -0.56927378 -0.82214802 0.00000000 0.00000 0.82214802  -0.56927378 0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 30.96720  
48 'helical symmetry operation' ?     ?     -0.83610812 -0.54856469 0.00000000 0.00000 0.54856469  -0.83610812 0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 32.37480  
49 'helical symmetry operation' ?     ?     -0.98083020 -0.19486436 0.00000000 0.00000 0.19486436  -0.98083020 0.00000000 0.00000 
0.00000000 0.00000000 1.00000000 33.78240  
# 
_struct_biol.id        1 
_struct_biol.details   ? 
# 
loop_
_struct_conf.conf_type_id 
_struct_conf.id 
_struct_conf.pdbx_PDB_helix_id 
_struct_conf.beg_label_comp_id 
_struct_conf.beg_label_asym_id 
_struct_conf.beg_label_seq_id 
_struct_conf.pdbx_beg_PDB_ins_code 
_struct_conf.end_label_comp_id 
_struct_conf.end_label_asym_id 
_struct_conf.end_label_seq_id 
_struct_conf.pdbx_end_PDB_ins_code 
_struct_conf.beg_auth_comp_id 
_struct_conf.beg_auth_asym_id 
_struct_conf.beg_auth_seq_id 
_struct_conf.end_auth_comp_id 
_struct_conf.end_auth_asym_id 
_struct_conf.end_auth_seq_id 
_struct_conf.pdbx_PDB_helix_class 
_struct_conf.details 
_struct_conf.pdbx_PDB_helix_length 
HELX_P HELX_P1 1 SER B 8   ? PHE B 12  ? SER A 8   PHE A 12  5 ? 5  
HELX_P HELX_P2 2 ASP B 19  ? ASN B 29  ? ASP A 19  ASN A 29  1 ? 11 
HELX_P HELX_P3 3 THR B 37  ? VAL B 51  ? THR A 37  VAL A 51  1 ? 15 
HELX_P HELX_P4 4 LEU B 76  ? ALA B 82  ? LEU A 76  ALA A 82  1 ? 7  
HELX_P HELX_P5 5 ALA B 82  ? ASP B 88  ? ALA A 82  ASP A 88  1 ? 7  
HELX_P HELX_P6 6 ARG B 92  ? GLU B 97  ? ARG A 92  GLU A 97  1 ? 6  
HELX_P HELX_P7 7 THR B 103 ? VAL B 130 ? THR A 103 VAL A 130 1 ? 28 
HELX_P HELX_P8 8 ARG B 141 ? GLU B 145 ? ARG A 141 GLU A 145 1 ? 5  
# 
_struct_conf_type.id          HELX_P 
_struct_conf_type.criteria    ? 
_struct_conf_type.reference   ? 
# 
loop_
_struct_mon_prot_cis.pdbx_id 
_struct_mon_prot_cis.label_comp_id 
_struct_mon_prot_cis.label_seq_id 
_struct_mon_prot_cis.label_asym_id 
_struct_mon_prot_cis.label_alt_id 
_struct_mon_prot_cis.pdbx_PDB_ins_code 
_struct_mon_prot_cis.auth_comp_id 
_struct_mon_prot_cis.auth_seq_id 
_struct_mon_prot_cis.auth_asym_id 
_struct_mon_prot_cis.pdbx_label_comp_id_2 
_struct_mon_prot_cis.pdbx_label_seq_id_2 
_struct_mon_prot_cis.pdbx_label_asym_id_2 
_struct_mon_prot_cis.pdbx_PDB_ins_code_2 
_struct_mon_prot_cis.pdbx_auth_comp_id_2 
_struct_mon_prot_cis.pdbx_auth_seq_id_2 
_struct_mon_prot_cis.pdbx_auth_asym_id_2 
_struct_mon_prot_cis.pdbx_PDB_model_num 
_struct_mon_prot_cis.pdbx_omega_angle 
1  GLN 99  B . ? GLN 99  A ALA 100 B ? ALA 100 A 1 14.45  
2  SER 148 B . ? SER 148 A GLY 149 B ? GLY 149 A 1 -3.17  
3  ASN 91  B . ? ASN 91  A ARG 92  B ? ARG 92  A 2 -22.46 
4  GLN 99  B . ? GLN 99  A ALA 100 B ? ALA 100 A 2 9.07   
5  SER 148 B . ? SER 148 A GLY 149 B ? GLY 149 A 2 2.07   
6  GLN 99  B . ? GLN 99  A ALA 100 B ? ALA 100 A 3 19.61  
7  SER 148 B . ? SER 148 A GLY 149 B ? GLY 149 A 3 -2.88  
8  GLN 99  B . ? GLN 99  A ALA 100 B ? ALA 100 A 4 6.74   
9  SER 148 B . ? SER 148 A GLY 149 B ? GLY 149 A 4 -2.07  
10 GLN 99  B . ? GLN 99  A ALA 100 B ? ALA 100 A 5 4.45   
11 SER 148 B . ? SER 148 A GLY 149 B ? GLY 149 A 5 -1.12  
# 
_struct_sheet.id               A 
_struct_sheet.type             ? 
_struct_sheet.number_strands   3 
_struct_sheet.details          ? 
# 
loop_
_struct_sheet_order.sheet_id 
_struct_sheet_order.range_id_1 
_struct_sheet_order.range_id_2 
_struct_sheet_order.offset 
_struct_sheet_order.sense 
A 1 2 ? anti-parallel 
A 2 3 ? anti-parallel 
# 
loop_
_struct_sheet_range.sheet_id 
_struct_sheet_range.id 
_struct_sheet_range.beg_label_comp_id 
_struct_sheet_range.beg_label_asym_id 
_struct_sheet_range.beg_label_seq_id 
_struct_sheet_range.pdbx_beg_PDB_ins_code 
_struct_sheet_range.end_label_comp_id 
_struct_sheet_range.end_label_asym_id 
_struct_sheet_range.end_label_seq_id 
_struct_sheet_range.pdbx_end_PDB_ins_code 
_struct_sheet_range.beg_auth_comp_id 
_struct_sheet_range.beg_auth_asym_id 
_struct_sheet_range.beg_auth_seq_id 
_struct_sheet_range.end_auth_comp_id 
_struct_sheet_range.end_auth_asym_id 
_struct_sheet_range.end_auth_seq_id 
A 1 TRP B 17  ? ALA B 18  ? TRP A 17  ALA A 18  
A 2 PHE B 67  ? TYR B 70  ? PHE A 67  TYR A 70  
A 3 SER B 138 ? ASN B 140 ? SER A 138 ASN A 140 
# 
loop_
_pdbx_struct_sheet_hbond.sheet_id 
_pdbx_struct_sheet_hbond.range_id_1 
_pdbx_struct_sheet_hbond.range_id_2 
_pdbx_struct_sheet_hbond.range_1_label_atom_id 
_pdbx_struct_sheet_hbond.range_1_label_comp_id 
_pdbx_struct_sheet_hbond.range_1_label_asym_id 
_pdbx_struct_sheet_hbond.range_1_label_seq_id 
_pdbx_struct_sheet_hbond.range_1_PDB_ins_code 
_pdbx_struct_sheet_hbond.range_1_auth_atom_id 
_pdbx_struct_sheet_hbond.range_1_auth_comp_id 
_pdbx_struct_sheet_hbond.range_1_auth_asym_id 
_pdbx_struct_sheet_hbond.range_1_auth_seq_id 
_pdbx_struct_sheet_hbond.range_2_label_atom_id 
_pdbx_struct_sheet_hbond.range_2_label_comp_id 
_pdbx_struct_sheet_hbond.range_2_label_asym_id 
_pdbx_struct_sheet_hbond.range_2_label_seq_id 
_pdbx_struct_sheet_hbond.range_2_PDB_ins_code 
_pdbx_struct_sheet_hbond.range_2_auth_atom_id 
_pdbx_struct_sheet_hbond.range_2_auth_comp_id 
_pdbx_struct_sheet_hbond.range_2_auth_asym_id 
_pdbx_struct_sheet_hbond.range_2_auth_seq_id 
A 1 2 N ALA B 18 ? N ALA A 18 O VAL B 69  ? O VAL A 69  
A 2 3 N LYS B 68 ? N LYS A 68 O TYR B 139 ? O TYR A 139 
# 
loop_
_pdbx_validate_torsion.id 
_pdbx_validate_torsion.PDB_model_num 
_pdbx_validate_torsion.auth_comp_id 
_pdbx_validate_torsion.auth_asym_id 
_pdbx_validate_torsion.auth_seq_id 
_pdbx_validate_torsion.PDB_ins_code 
_pdbx_validate_torsion.label_alt_id 
_pdbx_validate_torsion.phi 
_pdbx_validate_torsion.psi 
1  1 THR A 5   ? A -105.46 -73.95  
2  1 SER A 14  ? A -17.30  177.63  
3  1 SER A 15  ? A -105.62 53.56   
4  1 ALA A 18  ? A -170.59 -179.76 
5  1 ASN A 33  ? A -160.83 -164.40 
6  1 VAL A 58  ? A -68.59  -72.02  
7  1 ASP A 64  ? A -74.71  -71.22  
8  1 ALA A 74  ? A -35.88  -20.35  
9  1 GLU A 97  ? A -63.26  98.75   
10 1 ALA A 100 ? A -163.17 -137.04 
11 1 ASN A 101 ? A 82.06   114.07  
12 1 THR A 103 ? A 68.07   129.41  
13 1 ARG A 141 ? A -19.67  -52.66  
14 1 SER A 148 ? A -120.46 -52.09  
15 2 LEU A 13  ? B -96.44  52.52   
16 2 LEU A 31  ? B -57.45  -7.87   
17 2 ASN A 33  ? B -162.61 -156.17 
18 2 VAL A 58  ? B -66.08  -70.16  
19 2 ALA A 74  ? B -36.67  -19.79  
20 2 ALA A 100 ? B -151.65 -131.61 
21 2 ASN A 101 ? B 70.96   108.26  
22 2 THR A 103 ? B 76.41   142.05  
23 2 ARG A 141 ? B -12.56  -62.19  
24 3 THR A 5   ? C -120.74 -67.29  
25 3 SER A 15  ? C -58.87  68.92   
26 3 ASN A 33  ? C -160.95 -161.66 
27 3 ALA A 74  ? C -35.31  -18.88  
28 3 ALA A 100 ? C -162.44 -134.32 
29 3 ASN A 101 ? C 98.02   123.59  
30 3 THR A 103 ? C 85.93   140.74  
31 4 SER A 15  ? D -95.90  49.76   
32 4 ASN A 33  ? D -162.39 -156.23 
33 4 ALA A 74  ? D -34.93  -18.23  
34 4 GLU A 97  ? D -64.21  95.75   
35 4 ALA A 100 ? D -156.93 -146.27 
36 4 ASN A 101 ? D 77.81   153.21  
37 4 PRO A 102 ? D -54.19  -83.98  
38 4 THR A 103 ? D 82.10   146.62  
39 4 THR A 107 ? D -93.02  33.17   
40 4 LEU A 108 ? D -109.48 -60.83  
41 4 ARG A 141 ? D -18.45  -49.42  
42 4 SER A 147 ? D -152.49 52.70   
43 5 THR A 5   ? E -115.72 -71.43  
44 5 ASN A 33  ? E -162.56 -156.83 
45 5 VAL A 58  ? E -65.94  -70.67  
46 5 ALA A 74  ? E -36.46  -20.30  
47 5 ASN A 98  ? E -145.93 50.33   
48 5 ALA A 100 ? E -149.74 -120.32 
49 5 ASN A 101 ? E 80.40   146.27  
50 5 THR A 103 ? E 91.11   135.28  
51 5 ARG A 141 ? E -14.88  -59.33  
52 5 SER A 147 ? E -147.98 13.83   
# 
loop_
_pdbx_validate_peptide_omega.id 
_pdbx_validate_peptide_omega.PDB_model_num 
_pdbx_validate_peptide_omega.auth_comp_id_1 
_pdbx_validate_peptide_omega.auth_asym_id_1 
_pdbx_validate_peptide_omega.auth_seq_id_1 
_pdbx_validate_peptide_omega.PDB_ins_code_1 
_pdbx_validate_peptide_omega.label_alt_id_1 
_pdbx_validate_peptide_omega.auth_comp_id_2 
_pdbx_validate_peptide_omega.auth_asym_id_2 
_pdbx_validate_peptide_omega.auth_seq_id_2 
_pdbx_validate_peptide_omega.PDB_ins_code_2 
_pdbx_validate_peptide_omega.label_alt_id_2 
_pdbx_validate_peptide_omega.omega 
1 1 PRO A 54 ? A SER A 55 ? A 140.59 
2 1 ASN A 91 ? A ARG A 92 ? A -42.73 
3 2 PRO A 54 ? B SER A 55 ? B 137.74 
4 3 PRO A 54 ? C SER A 55 ? C 117.16 
5 3 ASN A 91 ? C ARG A 92 ? C -30.93 
6 4 PRO A 54 ? D SER A 55 ? D 130.79 
7 4 ASN A 91 ? D ARG A 92 ? D -36.93 
8 5 PRO A 54 ? E SER A 55 ? E 121.61 
9 5 ASN A 91 ? E ARG A 92 ? E -44.60 
# 
_pdbx_validate_main_chain_plane.id                       1 
_pdbx_validate_main_chain_plane.PDB_model_num            1 
_pdbx_validate_main_chain_plane.auth_comp_id             LEU 
_pdbx_validate_main_chain_plane.auth_asym_id             A 
_pdbx_validate_main_chain_plane.auth_seq_id              13 
_pdbx_validate_main_chain_plane.PDB_ins_code             ? 
_pdbx_validate_main_chain_plane.label_alt_id             A 
_pdbx_validate_main_chain_plane.improper_torsion_angle   10.45 
# 
_pdbx_helical_symmetry.entry_id                  2OM3 
_pdbx_helical_symmetry.number_of_operations      49 
_pdbx_helical_symmetry.rotation_per_n_subunits   22.031800 
_pdbx_helical_symmetry.rise_per_n_subunits       1.407600 
_pdbx_helical_symmetry.n_subunits_divisor        1 
_pdbx_helical_symmetry.dyad_axis                 no 
_pdbx_helical_symmetry.circular_symmetry         1 
# 
loop_
_pdbx_struct_legacy_oper_list.id 
_pdbx_struct_legacy_oper_list.name 
_pdbx_struct_legacy_oper_list.matrix[1][1] 
_pdbx_struct_legacy_oper_list.matrix[1][2] 
_pdbx_struct_legacy_oper_list.matrix[1][3] 
_pdbx_struct_legacy_oper_list.vector[1] 
_pdbx_struct_legacy_oper_list.matrix[2][1] 
_pdbx_struct_legacy_oper_list.matrix[2][2] 
_pdbx_struct_legacy_oper_list.matrix[2][3] 
_pdbx_struct_legacy_oper_list.vector[2] 
_pdbx_struct_legacy_oper_list.matrix[3][1] 
_pdbx_struct_legacy_oper_list.matrix[3][2] 
_pdbx_struct_legacy_oper_list.matrix[3][3] 
_pdbx_struct_legacy_oper_list.vector[3] 
1  'helical symmetry operation' -0.98083020 0.19486436  0.00000000 0.00000 -0.19486436 -0.98083020 0.00000000 0.00000 0.00000000 
0.00000000 1.00000000 -33.78240 
2  'helical symmetry operation' -0.83610812 0.54856469  0.00000000 0.00000 -0.54856469 -0.83610812 0.00000000 0.00000 0.00000000 
0.00000000 1.00000000 -32.37480 
3  'helical symmetry operation' -0.56927378 0.82214802  0.00000000 0.00000 -0.82214802 -0.56927378 0.00000000 0.00000 0.00000000 
0.00000000 1.00000000 -30.96720 
4  'helical symmetry operation' -0.21929792 0.97565794  0.00000000 0.00000 -0.97565794 -0.21929792 0.00000000 0.00000 0.00000000 
0.00000000 1.00000000 -29.55960 
5  'helical symmetry operation' 0.16270605  0.98667459  0.00000000 0.00000 -0.98667459 0.16270605  0.00000000 0.00000 0.00000000 
0.00000000 1.00000000 -28.15200 
6  'helical symmetry operation' 0.52094706  0.85358899  0.00000000 0.00000 -0.85358899 0.52094706  0.00000000 0.00000 0.00000000 
0.00000000 1.00000000 -26.74440 
7  'helical symmetry operation' 0.80310459  0.59583808  0.00000000 0.00000 -0.59583808 0.80310459  0.00000000 0.00000 0.00000000 
0.00000000 1.00000000 -25.33680 
8  'helical symmetry operation' 0.96796998  0.25106597  0.00000000 0.00000 -0.25106597 0.96796998  0.00000000 0.00000 0.00000000 
0.00000000 1.00000000 -23.92920 
9  'helical symmetry operation' 0.99146490  -0.13037392 0.00000000 0.00000 0.13037392  0.99146490  0.00000000 0.00000 0.00000000 
0.00000000 1.00000000 -22.52160 
10 'helical symmetry operation' 0.87015795  -0.49277290 0.00000000 0.00000 0.49277290  0.87015795  0.00000000 0.00000 0.00000000 
0.00000000 1.00000000 -21.11400 
11 'helical symmetry operation' 0.62176583  -0.78320320 0.00000000 0.00000 0.78320320  0.62176583  0.00000000 0.00000 0.00000000 
0.00000000 1.00000000 -19.70640 
12 'helical symmetry operation' 0.28256581  -0.95924792 0.00000000 0.00000 0.95924792  0.28256581  0.00000000 0.00000 0.00000000 
0.00000000 1.00000000 -18.29880 
13 'helical symmetry operation' -0.09790250 -0.99519601 0.00000000 0.00000 0.99519601  -0.09790250 0.00000000 0.00000 0.00000000 
0.00000000 1.00000000 -16.89120 
14 'helical symmetry operation' -0.46407231 -0.88579732 0.00000000 0.00000 0.88579732  -0.46407231 0.00000000 0.00000 0.00000000 
0.00000000 1.00000000 -15.48360 
15 'helical symmetry operation' -0.76246510 -0.64702935 0.00000000 0.00000 0.64702935  -0.76246510 0.00000000 0.00000 0.00000000 
0.00000000 1.00000000 -14.07600 
16 'helical symmetry operation' -0.94950108 -0.31376377 0.00000000 0.00000 0.31376377  -0.94950108 0.00000000 0.00000 0.00000000 
0.00000000 1.00000000 -12.66840 
17 'helical symmetry operation' -0.99786394 0.06532650  0.00000000 0.00000 -0.06532650 -0.99786394 0.00000000 0.00000 0.00000000 
0.00000000 1.00000000 -11.26080 
18 'helical symmetry operation' -0.90049038 0.43487594  0.00000000 0.00000 -0.43487594 -0.90049038 0.00000000 0.00000 0.00000000 
0.00000000 1.00000000 -9.85320  
19 'helical symmetry operation' -0.67160163 0.74091245  0.00000000 0.00000 -0.74091245 -0.67160163 0.00000000 0.00000 0.00000000 
0.00000000 1.00000000 -8.44560  
20 'helical symmetry operation' -0.34462654 0.93873987  0.00000000 0.00000 -0.93873987 -0.34462654 0.00000000 0.00000 0.00000000 
0.00000000 1.00000000 -7.03800  
21 'helical symmetry operation' 0.03268071  0.99946584  0.00000000 0.00000 -0.99946584 0.03268071  0.00000000 0.00000 0.00000000 
0.00000000 1.00000000 -5.63040  
22 'helical symmetry operation' 0.40521499  0.91422143  0.00000000 0.00000 -0.91422143 0.40521499  0.00000000 0.00000 0.00000000 
0.00000000 1.00000000 -4.22280  
23 'helical symmetry operation' 0.71856827  0.69545643  0.00000000 0.00000 -0.69545643 0.71856827  0.00000000 0.00000 0.00000000 
0.00000000 1.00000000 -2.81520  
24 'helical symmetry operation' 0.92697580  0.37512114  0.00000000 0.00000 -0.37512114 0.92697580  0.00000000 0.00000 0.00000000 
0.00000000 1.00000000 -1.40760  
25 'helical symmetry operation' 1.00000000  0.00000000  0.00000000 0.00000 0.00000000  1.00000000  0.00000000 0.00000 0.00000000 
0.00000000 1.00000000 0.00000   
26 'helical symmetry operation' 0.92697580  -0.37512114 0.00000000 0.00000 0.37512114  0.92697580  0.00000000 0.00000 0.00000000 
0.00000000 1.00000000 1.40760   
27 'helical symmetry operation' 0.71856827  -0.69545643 0.00000000 0.00000 0.69545643  0.71856827  0.00000000 0.00000 0.00000000 
0.00000000 1.00000000 2.81520   
28 'helical symmetry operation' 0.40521499  -0.91422143 0.00000000 0.00000 0.91422143  0.40521499  0.00000000 0.00000 0.00000000 
0.00000000 1.00000000 4.22280   
29 'helical symmetry operation' 0.03268071  -0.99946584 0.00000000 0.00000 0.99946584  0.03268071  0.00000000 0.00000 0.00000000 
0.00000000 1.00000000 5.63040   
30 'helical symmetry operation' -0.34462654 -0.93873987 0.00000000 0.00000 0.93873987  -0.34462654 0.00000000 0.00000 0.00000000 
0.00000000 1.00000000 7.03800   
31 'helical symmetry operation' -0.67160163 -0.74091245 0.00000000 0.00000 0.74091245  -0.67160163 0.00000000 0.00000 0.00000000 
0.00000000 1.00000000 8.44560   
32 'helical symmetry operation' -0.90049038 -0.43487594 0.00000000 0.00000 0.43487594  -0.90049038 0.00000000 0.00000 0.00000000 
0.00000000 1.00000000 9.85320   
33 'helical symmetry operation' -0.99786394 -0.06532650 0.00000000 0.00000 0.06532650  -0.99786394 0.00000000 0.00000 0.00000000 
0.00000000 1.00000000 11.26080  
34 'helical symmetry operation' -0.94950108 0.31376377  0.00000000 0.00000 -0.31376377 -0.94950108 0.00000000 0.00000 0.00000000 
0.00000000 1.00000000 12.66840  
35 'helical symmetry operation' -0.76246510 0.64702935  0.00000000 0.00000 -0.64702935 -0.76246510 0.00000000 0.00000 0.00000000 
0.00000000 1.00000000 14.07600  
36 'helical symmetry operation' -0.46407231 0.88579732  0.00000000 0.00000 -0.88579732 -0.46407231 0.00000000 0.00000 0.00000000 
0.00000000 1.00000000 15.48360  
37 'helical symmetry operation' -0.09790250 0.99519601  0.00000000 0.00000 -0.99519601 -0.09790250 0.00000000 0.00000 0.00000000 
0.00000000 1.00000000 16.89120  
38 'helical symmetry operation' 0.28256581  0.95924792  0.00000000 0.00000 -0.95924792 0.28256581  0.00000000 0.00000 0.00000000 
0.00000000 1.00000000 18.29880  
39 'helical symmetry operation' 0.62176583  0.78320320  0.00000000 0.00000 -0.78320320 0.62176583  0.00000000 0.00000 0.00000000 
0.00000000 1.00000000 19.70640  
40 'helical symmetry operation' 0.87015795  0.49277290  0.00000000 0.00000 -0.49277290 0.87015795  0.00000000 0.00000 0.00000000 
0.00000000 1.00000000 21.11400  
41 'helical symmetry operation' 0.99146490  0.13037392  0.00000000 0.00000 -0.13037392 0.99146490  0.00000000 0.00000 0.00000000 
0.00000000 1.00000000 22.52160  
42 'helical symmetry operation' 0.96796998  -0.25106597 0.00000000 0.00000 0.25106597  0.96796998  0.00000000 0.00000 0.00000000 
0.00000000 1.00000000 23.92920  
43 'helical symmetry operation' 0.80310459  -0.59583808 0.00000000 0.00000 0.59583808  0.80310459  0.00000000 0.00000 0.00000000 
0.00000000 1.00000000 25.33680  
44 'helical symmetry operation' 0.52094706  -0.85358899 0.00000000 0.00000 0.85358899  0.52094706  0.00000000 0.00000 0.00000000 
0.00000000 1.00000000 26.74440  
45 'helical symmetry operation' 0.16270605  -0.98667459 0.00000000 0.00000 0.98667459  0.16270605  0.00000000 0.00000 0.00000000 
0.00000000 1.00000000 28.15200  
46 'helical symmetry operation' -0.21929792 -0.97565794 0.00000000 0.00000 0.97565794  -0.21929792 0.00000000 0.00000 0.00000000 
0.00000000 1.00000000 29.55960  
47 'helical symmetry operation' -0.56927378 -0.82214802 0.00000000 0.00000 0.82214802  -0.56927378 0.00000000 0.00000 0.00000000 
0.00000000 1.00000000 30.96720  
48 'helical symmetry operation' -0.83610812 -0.54856469 0.00000000 0.00000 0.54856469  -0.83610812 0.00000000 0.00000 0.00000000 
0.00000000 1.00000000 32.37480  
49 'helical symmetry operation' -0.98083020 -0.19486436 0.00000000 0.00000 0.19486436  -0.98083020 0.00000000 0.00000 0.00000000 
0.00000000 1.00000000 33.78240  
# 
_em_3d_fitting.id                1 
_em_3d_fitting.entry_id          2OM3 
_em_3d_fitting.ref_protocol      'FLEXIBLE FIT' 
_em_3d_fitting.ref_space         REAL 
_em_3d_fitting.overall_b_value   ? 
_em_3d_fitting.target_criteria   
;Minimization of least-square difference between observed and calculated 
densities
;
_em_3d_fitting.details           
;METHOD--Torsion angle molecular dynamics REFINEMENT PROTOCOL--Real-space 
molecular dynamics
;
_em_3d_fitting.method            ? 
# 
_em_3d_fitting_list.id                            1 
_em_3d_fitting_list.3d_fitting_id                 1 
_em_3d_fitting_list.pdb_entry_id                  2TMV 
_em_3d_fitting_list.pdb_chain_id                  ? 
_em_3d_fitting_list.initial_refinement_model_id   1 
_em_3d_fitting_list.chain_id                      ? 
_em_3d_fitting_list.chain_residue_range           ? 
_em_3d_fitting_list.pdb_chain_residue_range       ? 
_em_3d_fitting_list.source_name                   PDB 
_em_3d_fitting_list.type                          'experimental model' 
_em_3d_fitting_list.accession_code                2TMV 
_em_3d_fitting_list.details                       ? 
# 
_em_3d_reconstruction.entry_id                    2OM3 
_em_3d_reconstruction.id                          1 
_em_3d_reconstruction.symmetry_type               HELICAL 
_em_3d_reconstruction.image_processing_id         1 
_em_3d_reconstruction.method                      'Single-particel helical reconstruction' 
_em_3d_reconstruction.nominal_pixel_size          1.186 
_em_3d_reconstruction.actual_pixel_size           1.163 
_em_3d_reconstruction.resolution                  4.4 
_em_3d_reconstruction.magnification_calibration   'Maximization of FSC (resolution range 4-10 Angstrom) with atomic model' 
_em_3d_reconstruction.details                     'SIRT algorithm implemented in the SPIDER processing package (command BP RP)' 
_em_3d_reconstruction.resolution_method           ? 
_em_3d_reconstruction.num_class_averages          ? 
_em_3d_reconstruction.num_particles               ? 
_em_3d_reconstruction.algorithm                   ? 
# 
_em_buffer.id            1 
_em_buffer.specimen_id   1 
_em_buffer.name          'Phosphate (5mM EDTA)' 
_em_buffer.pH            7.4 
_em_buffer.details       'Phosphate (5mM EDTA)' 
# 
_em_entity_assembly.id                   1 
_em_entity_assembly.name                 'Tobacco Mosaic Virus' 
_em_entity_assembly.type                 VIRUS 
_em_entity_assembly.parent_id            0 
_em_entity_assembly.synonym              ? 
_em_entity_assembly.details              'Helical Virus. Pitch of helix: 23 Angstrom, 49.02 subunits make up three complete turns.' 
_em_entity_assembly.oligomeric_details   ? 
# 
_em_image_scans.entry_id                2OM3 
_em_image_scans.id                      1 
_em_image_scans.image_recording_id      1 
_em_image_scans.number_digital_images   6 
_em_image_scans.citation_id             ? 
_em_image_scans.od_range                ? 
_em_image_scans.quant_bit_size          ? 
_em_image_scans.sampling_size           ? 
_em_image_scans.scanner_model           ? 
_em_image_scans.details                 ? 
# 
_em_imaging.entry_id                        2OM3 
_em_imaging.id                              1 
_em_imaging.microscope_model                'FEI TECNAI F30' 
_em_imaging.mode                            'BRIGHT FIELD' 
_em_imaging.date                            2005-11-22 
_em_imaging.illumination_mode               'FLOOD BEAM' 
_em_imaging.electron_source                 'FIELD EMISSION GUN' 
_em_imaging.specimen_id                     1 
_em_imaging.temperature                     93 
_em_imaging.nominal_defocus_min             1.5 
_em_imaging.nominal_defocus_max             4.0 
_em_imaging.tilt_angle_min                  0 
_em_imaging.tilt_angle_max                  0 
_em_imaging.nominal_cs                      2.0 
_em_imaging.nominal_magnification           59000 
_em_imaging.calibrated_magnification        60190 
_em_imaging.accelerating_voltage            200 
_em_imaging.details                         ? 
_em_imaging.specimen_holder_type            ? 
_em_imaging.specimen_holder_model           ? 
_em_imaging.citation_id                     ? 
_em_imaging.detector_distance               ? 
_em_imaging.recording_temperature_maximum   ? 
_em_imaging.recording_temperature_minimum   ? 
_em_imaging.astigmatism                     ? 
_em_imaging.electron_beam_tilt_params       ? 
# 
_em_sample_support.id               1 
_em_sample_support.specimen_id      1 
_em_sample_support.details          'Quantifoil grid' 
_em_sample_support.film_material    ? 
_em_sample_support.grid_material    ? 
_em_sample_support.grid_mesh_size   ? 
_em_sample_support.grid_type        ? 
_em_sample_support.method           ? 
# 
_em_virus_entity.id                    1 
_em_virus_entity.virus_type            VIRION 
_em_virus_entity.virus_host_category   PLANTS 
_em_virus_entity.entity_assembly_id    1 
_em_virus_entity.virus_isolate         ? 
_em_virus_entity.empty                 ? 
_em_virus_entity.enveloped             ? 
_em_virus_entity.details               ? 
# 
_em_vitrification.entry_id              2OM3 
_em_vitrification.id                    1 
_em_vitrification.instrument            'HOMEMADE PLUNGER' 
_em_vitrification.cryogen_name          ETHANE 
_em_vitrification.specimen_id           1 
_em_vitrification.details               'The sample was plunge-frozen at 4C.' 
_em_vitrification.citation_id           ? 
_em_vitrification.humidity              ? 
_em_vitrification.method                ? 
_em_vitrification.temp                  ? 
_em_vitrification.time_resolved_state   ? 
# 
_em_experiment.entry_id                2OM3 
_em_experiment.id                      1 
_em_experiment.aggregation_state       FILAMENT 
_em_experiment.entity_assembly_id      1 
_em_experiment.reconstruction_method   HELICAL 
# 
loop_
_pdbx_unobs_or_zero_occ_residues.id 
_pdbx_unobs_or_zero_occ_residues.PDB_model_num 
_pdbx_unobs_or_zero_occ_residues.polymer_flag 
_pdbx_unobs_or_zero_occ_residues.occupancy_flag 
_pdbx_unobs_or_zero_occ_residues.auth_asym_id 
_pdbx_unobs_or_zero_occ_residues.auth_comp_id 
_pdbx_unobs_or_zero_occ_residues.auth_seq_id 
_pdbx_unobs_or_zero_occ_residues.PDB_ins_code 
_pdbx_unobs_or_zero_occ_residues.label_asym_id 
_pdbx_unobs_or_zero_occ_residues.label_comp_id 
_pdbx_unobs_or_zero_occ_residues.label_seq_id 
1  1 Y 1 A GLY 155 ? B GLY 155 
2  1 Y 1 A PRO 156 ? B PRO 156 
3  1 Y 1 A ALA 157 ? B ALA 157 
4  1 Y 1 A THR 158 ? B THR 158 
5  2 Y 1 A GLY 155 ? B GLY 155 
6  2 Y 1 A PRO 156 ? B PRO 156 
7  2 Y 1 A ALA 157 ? B ALA 157 
8  2 Y 1 A THR 158 ? B THR 158 
9  3 Y 1 A GLY 155 ? B GLY 155 
10 3 Y 1 A PRO 156 ? B PRO 156 
11 3 Y 1 A ALA 157 ? B ALA 157 
12 3 Y 1 A THR 158 ? B THR 158 
13 4 Y 1 A GLY 155 ? B GLY 155 
14 4 Y 1 A PRO 156 ? B PRO 156 
15 4 Y 1 A ALA 157 ? B ALA 157 
16 4 Y 1 A THR 158 ? B THR 158 
17 5 Y 1 A GLY 155 ? B GLY 155 
18 5 Y 1 A PRO 156 ? B PRO 156 
19 5 Y 1 A ALA 157 ? B ALA 157 
20 5 Y 1 A THR 158 ? B THR 158 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_ordinal 
A   OP3    O N N 1   
A   P      P N N 2   
A   OP1    O N N 3   
A   OP2    O N N 4   
A   "O5'"  O N N 5   
A   "C5'"  C N N 6   
A   "C4'"  C N R 7   
A   "O4'"  O N N 8   
A   "C3'"  C N S 9   
A   "O3'"  O N N 10  
A   "C2'"  C N R 11  
A   "O2'"  O N N 12  
A   "C1'"  C N R 13  
A   N9     N Y N 14  
A   C8     C Y N 15  
A   N7     N Y N 16  
A   C5     C Y N 17  
A   C6     C Y N 18  
A   N6     N N N 19  
A   N1     N Y N 20  
A   C2     C Y N 21  
A   N3     N Y N 22  
A   C4     C Y N 23  
A   HOP3   H N N 24  
A   HOP2   H N N 25  
A   "H5'"  H N N 26  
A   "H5''" H N N 27  
A   "H4'"  H N N 28  
A   "H3'"  H N N 29  
A   "HO3'" H N N 30  
A   "H2'"  H N N 31  
A   "HO2'" H N N 32  
A   "H1'"  H N N 33  
A   H8     H N N 34  
A   H61    H N N 35  
A   H62    H N N 36  
A   H2     H N N 37  
ALA N      N N N 38  
ALA CA     C N S 39  
ALA C      C N N 40  
ALA O      O N N 41  
ALA CB     C N N 42  
ALA OXT    O N N 43  
ALA H      H N N 44  
ALA H2     H N N 45  
ALA HA     H N N 46  
ALA HB1    H N N 47  
ALA HB2    H N N 48  
ALA HB3    H N N 49  
ALA HXT    H N N 50  
ARG N      N N N 51  
ARG CA     C N S 52  
ARG C      C N N 53  
ARG O      O N N 54  
ARG CB     C N N 55  
ARG CG     C N N 56  
ARG CD     C N N 57  
ARG NE     N N N 58  
ARG CZ     C N N 59  
ARG NH1    N N N 60  
ARG NH2    N N N 61  
ARG OXT    O N N 62  
ARG H      H N N 63  
ARG H2     H N N 64  
ARG HA     H N N 65  
ARG HB2    H N N 66  
ARG HB3    H N N 67  
ARG HG2    H N N 68  
ARG HG3    H N N 69  
ARG HD2    H N N 70  
ARG HD3    H N N 71  
ARG HE     H N N 72  
ARG HH11   H N N 73  
ARG HH12   H N N 74  
ARG HH21   H N N 75  
ARG HH22   H N N 76  
ARG HXT    H N N 77  
ASN N      N N N 78  
ASN CA     C N S 79  
ASN C      C N N 80  
ASN O      O N N 81  
ASN CB     C N N 82  
ASN CG     C N N 83  
ASN OD1    O N N 84  
ASN ND2    N N N 85  
ASN OXT    O N N 86  
ASN H      H N N 87  
ASN H2     H N N 88  
ASN HA     H N N 89  
ASN HB2    H N N 90  
ASN HB3    H N N 91  
ASN HD21   H N N 92  
ASN HD22   H N N 93  
ASN HXT    H N N 94  
ASP N      N N N 95  
ASP CA     C N S 96  
ASP C      C N N 97  
ASP O      O N N 98  
ASP CB     C N N 99  
ASP CG     C N N 100 
ASP OD1    O N N 101 
ASP OD2    O N N 102 
ASP OXT    O N N 103 
ASP H      H N N 104 
ASP H2     H N N 105 
ASP HA     H N N 106 
ASP HB2    H N N 107 
ASP HB3    H N N 108 
ASP HD2    H N N 109 
ASP HXT    H N N 110 
CYS N      N N N 111 
CYS CA     C N R 112 
CYS C      C N N 113 
CYS O      O N N 114 
CYS CB     C N N 115 
CYS SG     S N N 116 
CYS OXT    O N N 117 
CYS H      H N N 118 
CYS H2     H N N 119 
CYS HA     H N N 120 
CYS HB2    H N N 121 
CYS HB3    H N N 122 
CYS HG     H N N 123 
CYS HXT    H N N 124 
G   OP3    O N N 125 
G   P      P N N 126 
G   OP1    O N N 127 
G   OP2    O N N 128 
G   "O5'"  O N N 129 
G   "C5'"  C N N 130 
G   "C4'"  C N R 131 
G   "O4'"  O N N 132 
G   "C3'"  C N S 133 
G   "O3'"  O N N 134 
G   "C2'"  C N R 135 
G   "O2'"  O N N 136 
G   "C1'"  C N R 137 
G   N9     N Y N 138 
G   C8     C Y N 139 
G   N7     N Y N 140 
G   C5     C Y N 141 
G   C6     C N N 142 
G   O6     O N N 143 
G   N1     N N N 144 
G   C2     C N N 145 
G   N2     N N N 146 
G   N3     N N N 147 
G   C4     C Y N 148 
G   HOP3   H N N 149 
G   HOP2   H N N 150 
G   "H5'"  H N N 151 
G   "H5''" H N N 152 
G   "H4'"  H N N 153 
G   "H3'"  H N N 154 
G   "HO3'" H N N 155 
G   "H2'"  H N N 156 
G   "HO2'" H N N 157 
G   "H1'"  H N N 158 
G   H8     H N N 159 
G   H1     H N N 160 
G   H21    H N N 161 
G   H22    H N N 162 
GLN N      N N N 163 
GLN CA     C N S 164 
GLN C      C N N 165 
GLN O      O N N 166 
GLN CB     C N N 167 
GLN CG     C N N 168 
GLN CD     C N N 169 
GLN OE1    O N N 170 
GLN NE2    N N N 171 
GLN OXT    O N N 172 
GLN H      H N N 173 
GLN H2     H N N 174 
GLN HA     H N N 175 
GLN HB2    H N N 176 
GLN HB3    H N N 177 
GLN HG2    H N N 178 
GLN HG3    H N N 179 
GLN HE21   H N N 180 
GLN HE22   H N N 181 
GLN HXT    H N N 182 
GLU N      N N N 183 
GLU CA     C N S 184 
GLU C      C N N 185 
GLU O      O N N 186 
GLU CB     C N N 187 
GLU CG     C N N 188 
GLU CD     C N N 189 
GLU OE1    O N N 190 
GLU OE2    O N N 191 
GLU OXT    O N N 192 
GLU H      H N N 193 
GLU H2     H N N 194 
GLU HA     H N N 195 
GLU HB2    H N N 196 
GLU HB3    H N N 197 
GLU HG2    H N N 198 
GLU HG3    H N N 199 
GLU HE2    H N N 200 
GLU HXT    H N N 201 
GLY N      N N N 202 
GLY CA     C N N 203 
GLY C      C N N 204 
GLY O      O N N 205 
GLY OXT    O N N 206 
GLY H      H N N 207 
GLY H2     H N N 208 
GLY HA2    H N N 209 
GLY HA3    H N N 210 
GLY HXT    H N N 211 
ILE N      N N N 212 
ILE CA     C N S 213 
ILE C      C N N 214 
ILE O      O N N 215 
ILE CB     C N S 216 
ILE CG1    C N N 217 
ILE CG2    C N N 218 
ILE CD1    C N N 219 
ILE OXT    O N N 220 
ILE H      H N N 221 
ILE H2     H N N 222 
ILE HA     H N N 223 
ILE HB     H N N 224 
ILE HG12   H N N 225 
ILE HG13   H N N 226 
ILE HG21   H N N 227 
ILE HG22   H N N 228 
ILE HG23   H N N 229 
ILE HD11   H N N 230 
ILE HD12   H N N 231 
ILE HD13   H N N 232 
ILE HXT    H N N 233 
LEU N      N N N 234 
LEU CA     C N S 235 
LEU C      C N N 236 
LEU O      O N N 237 
LEU CB     C N N 238 
LEU CG     C N N 239 
LEU CD1    C N N 240 
LEU CD2    C N N 241 
LEU OXT    O N N 242 
LEU H      H N N 243 
LEU H2     H N N 244 
LEU HA     H N N 245 
LEU HB2    H N N 246 
LEU HB3    H N N 247 
LEU HG     H N N 248 
LEU HD11   H N N 249 
LEU HD12   H N N 250 
LEU HD13   H N N 251 
LEU HD21   H N N 252 
LEU HD22   H N N 253 
LEU HD23   H N N 254 
LEU HXT    H N N 255 
LYS N      N N N 256 
LYS CA     C N S 257 
LYS C      C N N 258 
LYS O      O N N 259 
LYS CB     C N N 260 
LYS CG     C N N 261 
LYS CD     C N N 262 
LYS CE     C N N 263 
LYS NZ     N N N 264 
LYS OXT    O N N 265 
LYS H      H N N 266 
LYS H2     H N N 267 
LYS HA     H N N 268 
LYS HB2    H N N 269 
LYS HB3    H N N 270 
LYS HG2    H N N 271 
LYS HG3    H N N 272 
LYS HD2    H N N 273 
LYS HD3    H N N 274 
LYS HE2    H N N 275 
LYS HE3    H N N 276 
LYS HZ1    H N N 277 
LYS HZ2    H N N 278 
LYS HZ3    H N N 279 
LYS HXT    H N N 280 
PHE N      N N N 281 
PHE CA     C N S 282 
PHE C      C N N 283 
PHE O      O N N 284 
PHE CB     C N N 285 
PHE CG     C Y N 286 
PHE CD1    C Y N 287 
PHE CD2    C Y N 288 
PHE CE1    C Y N 289 
PHE CE2    C Y N 290 
PHE CZ     C Y N 291 
PHE OXT    O N N 292 
PHE H      H N N 293 
PHE H2     H N N 294 
PHE HA     H N N 295 
PHE HB2    H N N 296 
PHE HB3    H N N 297 
PHE HD1    H N N 298 
PHE HD2    H N N 299 
PHE HE1    H N N 300 
PHE HE2    H N N 301 
PHE HZ     H N N 302 
PHE HXT    H N N 303 
PRO N      N N N 304 
PRO CA     C N S 305 
PRO C      C N N 306 
PRO O      O N N 307 
PRO CB     C N N 308 
PRO CG     C N N 309 
PRO CD     C N N 310 
PRO OXT    O N N 311 
PRO H      H N N 312 
PRO HA     H N N 313 
PRO HB2    H N N 314 
PRO HB3    H N N 315 
PRO HG2    H N N 316 
PRO HG3    H N N 317 
PRO HD2    H N N 318 
PRO HD3    H N N 319 
PRO HXT    H N N 320 
SER N      N N N 321 
SER CA     C N S 322 
SER C      C N N 323 
SER O      O N N 324 
SER CB     C N N 325 
SER OG     O N N 326 
SER OXT    O N N 327 
SER H      H N N 328 
SER H2     H N N 329 
SER HA     H N N 330 
SER HB2    H N N 331 
SER HB3    H N N 332 
SER HG     H N N 333 
SER HXT    H N N 334 
THR N      N N N 335 
THR CA     C N S 336 
THR C      C N N 337 
THR O      O N N 338 
THR CB     C N R 339 
THR OG1    O N N 340 
THR CG2    C N N 341 
THR OXT    O N N 342 
THR H      H N N 343 
THR H2     H N N 344 
THR HA     H N N 345 
THR HB     H N N 346 
THR HG1    H N N 347 
THR HG21   H N N 348 
THR HG22   H N N 349 
THR HG23   H N N 350 
THR HXT    H N N 351 
TRP N      N N N 352 
TRP CA     C N S 353 
TRP C      C N N 354 
TRP O      O N N 355 
TRP CB     C N N 356 
TRP CG     C Y N 357 
TRP CD1    C Y N 358 
TRP CD2    C Y N 359 
TRP NE1    N Y N 360 
TRP CE2    C Y N 361 
TRP CE3    C Y N 362 
TRP CZ2    C Y N 363 
TRP CZ3    C Y N 364 
TRP CH2    C Y N 365 
TRP OXT    O N N 366 
TRP H      H N N 367 
TRP H2     H N N 368 
TRP HA     H N N 369 
TRP HB2    H N N 370 
TRP HB3    H N N 371 
TRP HD1    H N N 372 
TRP HE1    H N N 373 
TRP HE3    H N N 374 
TRP HZ2    H N N 375 
TRP HZ3    H N N 376 
TRP HH2    H N N 377 
TRP HXT    H N N 378 
TYR N      N N N 379 
TYR CA     C N S 380 
TYR C      C N N 381 
TYR O      O N N 382 
TYR CB     C N N 383 
TYR CG     C Y N 384 
TYR CD1    C Y N 385 
TYR CD2    C Y N 386 
TYR CE1    C Y N 387 
TYR CE2    C Y N 388 
TYR CZ     C Y N 389 
TYR OH     O N N 390 
TYR OXT    O N N 391 
TYR H      H N N 392 
TYR H2     H N N 393 
TYR HA     H N N 394 
TYR HB2    H N N 395 
TYR HB3    H N N 396 
TYR HD1    H N N 397 
TYR HD2    H N N 398 
TYR HE1    H N N 399 
TYR HE2    H N N 400 
TYR HH     H N N 401 
TYR HXT    H N N 402 
VAL N      N N N 403 
VAL CA     C N S 404 
VAL C      C N N 405 
VAL O      O N N 406 
VAL CB     C N N 407 
VAL CG1    C N N 408 
VAL CG2    C N N 409 
VAL OXT    O N N 410 
VAL H      H N N 411 
VAL H2     H N N 412 
VAL HA     H N N 413 
VAL HB     H N N 414 
VAL HG11   H N N 415 
VAL HG12   H N N 416 
VAL HG13   H N N 417 
VAL HG21   H N N 418 
VAL HG22   H N N 419 
VAL HG23   H N N 420 
VAL HXT    H N N 421 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
A   OP3   P      sing N N 1   
A   OP3   HOP3   sing N N 2   
A   P     OP1    doub N N 3   
A   P     OP2    sing N N 4   
A   P     "O5'"  sing N N 5   
A   OP2   HOP2   sing N N 6   
A   "O5'" "C5'"  sing N N 7   
A   "C5'" "C4'"  sing N N 8   
A   "C5'" "H5'"  sing N N 9   
A   "C5'" "H5''" sing N N 10  
A   "C4'" "O4'"  sing N N 11  
A   "C4'" "C3'"  sing N N 12  
A   "C4'" "H4'"  sing N N 13  
A   "O4'" "C1'"  sing N N 14  
A   "C3'" "O3'"  sing N N 15  
A   "C3'" "C2'"  sing N N 16  
A   "C3'" "H3'"  sing N N 17  
A   "O3'" "HO3'" sing N N 18  
A   "C2'" "O2'"  sing N N 19  
A   "C2'" "C1'"  sing N N 20  
A   "C2'" "H2'"  sing N N 21  
A   "O2'" "HO2'" sing N N 22  
A   "C1'" N9     sing N N 23  
A   "C1'" "H1'"  sing N N 24  
A   N9    C8     sing Y N 25  
A   N9    C4     sing Y N 26  
A   C8    N7     doub Y N 27  
A   C8    H8     sing N N 28  
A   N7    C5     sing Y N 29  
A   C5    C6     sing Y N 30  
A   C5    C4     doub Y N 31  
A   C6    N6     sing N N 32  
A   C6    N1     doub Y N 33  
A   N6    H61    sing N N 34  
A   N6    H62    sing N N 35  
A   N1    C2     sing Y N 36  
A   C2    N3     doub Y N 37  
A   C2    H2     sing N N 38  
A   N3    C4     sing Y N 39  
ALA N     CA     sing N N 40  
ALA N     H      sing N N 41  
ALA N     H2     sing N N 42  
ALA CA    C      sing N N 43  
ALA CA    CB     sing N N 44  
ALA CA    HA     sing N N 45  
ALA C     O      doub N N 46  
ALA C     OXT    sing N N 47  
ALA CB    HB1    sing N N 48  
ALA CB    HB2    sing N N 49  
ALA CB    HB3    sing N N 50  
ALA OXT   HXT    sing N N 51  
ARG N     CA     sing N N 52  
ARG N     H      sing N N 53  
ARG N     H2     sing N N 54  
ARG CA    C      sing N N 55  
ARG CA    CB     sing N N 56  
ARG CA    HA     sing N N 57  
ARG C     O      doub N N 58  
ARG C     OXT    sing N N 59  
ARG CB    CG     sing N N 60  
ARG CB    HB2    sing N N 61  
ARG CB    HB3    sing N N 62  
ARG CG    CD     sing N N 63  
ARG CG    HG2    sing N N 64  
ARG CG    HG3    sing N N 65  
ARG CD    NE     sing N N 66  
ARG CD    HD2    sing N N 67  
ARG CD    HD3    sing N N 68  
ARG NE    CZ     sing N N 69  
ARG NE    HE     sing N N 70  
ARG CZ    NH1    sing N N 71  
ARG CZ    NH2    doub N N 72  
ARG NH1   HH11   sing N N 73  
ARG NH1   HH12   sing N N 74  
ARG NH2   HH21   sing N N 75  
ARG NH2   HH22   sing N N 76  
ARG OXT   HXT    sing N N 77  
ASN N     CA     sing N N 78  
ASN N     H      sing N N 79  
ASN N     H2     sing N N 80  
ASN CA    C      sing N N 81  
ASN CA    CB     sing N N 82  
ASN CA    HA     sing N N 83  
ASN C     O      doub N N 84  
ASN C     OXT    sing N N 85  
ASN CB    CG     sing N N 86  
ASN CB    HB2    sing N N 87  
ASN CB    HB3    sing N N 88  
ASN CG    OD1    doub N N 89  
ASN CG    ND2    sing N N 90  
ASN ND2   HD21   sing N N 91  
ASN ND2   HD22   sing N N 92  
ASN OXT   HXT    sing N N 93  
ASP N     CA     sing N N 94  
ASP N     H      sing N N 95  
ASP N     H2     sing N N 96  
ASP CA    C      sing N N 97  
ASP CA    CB     sing N N 98  
ASP CA    HA     sing N N 99  
ASP C     O      doub N N 100 
ASP C     OXT    sing N N 101 
ASP CB    CG     sing N N 102 
ASP CB    HB2    sing N N 103 
ASP CB    HB3    sing N N 104 
ASP CG    OD1    doub N N 105 
ASP CG    OD2    sing N N 106 
ASP OD2   HD2    sing N N 107 
ASP OXT   HXT    sing N N 108 
CYS N     CA     sing N N 109 
CYS N     H      sing N N 110 
CYS N     H2     sing N N 111 
CYS CA    C      sing N N 112 
CYS CA    CB     sing N N 113 
CYS CA    HA     sing N N 114 
CYS C     O      doub N N 115 
CYS C     OXT    sing N N 116 
CYS CB    SG     sing N N 117 
CYS CB    HB2    sing N N 118 
CYS CB    HB3    sing N N 119 
CYS SG    HG     sing N N 120 
CYS OXT   HXT    sing N N 121 
G   OP3   P      sing N N 122 
G   OP3   HOP3   sing N N 123 
G   P     OP1    doub N N 124 
G   P     OP2    sing N N 125 
G   P     "O5'"  sing N N 126 
G   OP2   HOP2   sing N N 127 
G   "O5'" "C5'"  sing N N 128 
G   "C5'" "C4'"  sing N N 129 
G   "C5'" "H5'"  sing N N 130 
G   "C5'" "H5''" sing N N 131 
G   "C4'" "O4'"  sing N N 132 
G   "C4'" "C3'"  sing N N 133 
G   "C4'" "H4'"  sing N N 134 
G   "O4'" "C1'"  sing N N 135 
G   "C3'" "O3'"  sing N N 136 
G   "C3'" "C2'"  sing N N 137 
G   "C3'" "H3'"  sing N N 138 
G   "O3'" "HO3'" sing N N 139 
G   "C2'" "O2'"  sing N N 140 
G   "C2'" "C1'"  sing N N 141 
G   "C2'" "H2'"  sing N N 142 
G   "O2'" "HO2'" sing N N 143 
G   "C1'" N9     sing N N 144 
G   "C1'" "H1'"  sing N N 145 
G   N9    C8     sing Y N 146 
G   N9    C4     sing Y N 147 
G   C8    N7     doub Y N 148 
G   C8    H8     sing N N 149 
G   N7    C5     sing Y N 150 
G   C5    C6     sing N N 151 
G   C5    C4     doub Y N 152 
G   C6    O6     doub N N 153 
G   C6    N1     sing N N 154 
G   N1    C2     sing N N 155 
G   N1    H1     sing N N 156 
G   C2    N2     sing N N 157 
G   C2    N3     doub N N 158 
G   N2    H21    sing N N 159 
G   N2    H22    sing N N 160 
G   N3    C4     sing N N 161 
GLN N     CA     sing N N 162 
GLN N     H      sing N N 163 
GLN N     H2     sing N N 164 
GLN CA    C      sing N N 165 
GLN CA    CB     sing N N 166 
GLN CA    HA     sing N N 167 
GLN C     O      doub N N 168 
GLN C     OXT    sing N N 169 
GLN CB    CG     sing N N 170 
GLN CB    HB2    sing N N 171 
GLN CB    HB3    sing N N 172 
GLN CG    CD     sing N N 173 
GLN CG    HG2    sing N N 174 
GLN CG    HG3    sing N N 175 
GLN CD    OE1    doub N N 176 
GLN CD    NE2    sing N N 177 
GLN NE2   HE21   sing N N 178 
GLN NE2   HE22   sing N N 179 
GLN OXT   HXT    sing N N 180 
GLU N     CA     sing N N 181 
GLU N     H      sing N N 182 
GLU N     H2     sing N N 183 
GLU CA    C      sing N N 184 
GLU CA    CB     sing N N 185 
GLU CA    HA     sing N N 186 
GLU C     O      doub N N 187 
GLU C     OXT    sing N N 188 
GLU CB    CG     sing N N 189 
GLU CB    HB2    sing N N 190 
GLU CB    HB3    sing N N 191 
GLU CG    CD     sing N N 192 
GLU CG    HG2    sing N N 193 
GLU CG    HG3    sing N N 194 
GLU CD    OE1    doub N N 195 
GLU CD    OE2    sing N N 196 
GLU OE2   HE2    sing N N 197 
GLU OXT   HXT    sing N N 198 
GLY N     CA     sing N N 199 
GLY N     H      sing N N 200 
GLY N     H2     sing N N 201 
GLY CA    C      sing N N 202 
GLY CA    HA2    sing N N 203 
GLY CA    HA3    sing N N 204 
GLY C     O      doub N N 205 
GLY C     OXT    sing N N 206 
GLY OXT   HXT    sing N N 207 
ILE N     CA     sing N N 208 
ILE N     H      sing N N 209 
ILE N     H2     sing N N 210 
ILE CA    C      sing N N 211 
ILE CA    CB     sing N N 212 
ILE CA    HA     sing N N 213 
ILE C     O      doub N N 214 
ILE C     OXT    sing N N 215 
ILE CB    CG1    sing N N 216 
ILE CB    CG2    sing N N 217 
ILE CB    HB     sing N N 218 
ILE CG1   CD1    sing N N 219 
ILE CG1   HG12   sing N N 220 
ILE CG1   HG13   sing N N 221 
ILE CG2   HG21   sing N N 222 
ILE CG2   HG22   sing N N 223 
ILE CG2   HG23   sing N N 224 
ILE CD1   HD11   sing N N 225 
ILE CD1   HD12   sing N N 226 
ILE CD1   HD13   sing N N 227 
ILE OXT   HXT    sing N N 228 
LEU N     CA     sing N N 229 
LEU N     H      sing N N 230 
LEU N     H2     sing N N 231 
LEU CA    C      sing N N 232 
LEU CA    CB     sing N N 233 
LEU CA    HA     sing N N 234 
LEU C     O      doub N N 235 
LEU C     OXT    sing N N 236 
LEU CB    CG     sing N N 237 
LEU CB    HB2    sing N N 238 
LEU CB    HB3    sing N N 239 
LEU CG    CD1    sing N N 240 
LEU CG    CD2    sing N N 241 
LEU CG    HG     sing N N 242 
LEU CD1   HD11   sing N N 243 
LEU CD1   HD12   sing N N 244 
LEU CD1   HD13   sing N N 245 
LEU CD2   HD21   sing N N 246 
LEU CD2   HD22   sing N N 247 
LEU CD2   HD23   sing N N 248 
LEU OXT   HXT    sing N N 249 
LYS N     CA     sing N N 250 
LYS N     H      sing N N 251 
LYS N     H2     sing N N 252 
LYS CA    C      sing N N 253 
LYS CA    CB     sing N N 254 
LYS CA    HA     sing N N 255 
LYS C     O      doub N N 256 
LYS C     OXT    sing N N 257 
LYS CB    CG     sing N N 258 
LYS CB    HB2    sing N N 259 
LYS CB    HB3    sing N N 260 
LYS CG    CD     sing N N 261 
LYS CG    HG2    sing N N 262 
LYS CG    HG3    sing N N 263 
LYS CD    CE     sing N N 264 
LYS CD    HD2    sing N N 265 
LYS CD    HD3    sing N N 266 
LYS CE    NZ     sing N N 267 
LYS CE    HE2    sing N N 268 
LYS CE    HE3    sing N N 269 
LYS NZ    HZ1    sing N N 270 
LYS NZ    HZ2    sing N N 271 
LYS NZ    HZ3    sing N N 272 
LYS OXT   HXT    sing N N 273 
PHE N     CA     sing N N 274 
PHE N     H      sing N N 275 
PHE N     H2     sing N N 276 
PHE CA    C      sing N N 277 
PHE CA    CB     sing N N 278 
PHE CA    HA     sing N N 279 
PHE C     O      doub N N 280 
PHE C     OXT    sing N N 281 
PHE CB    CG     sing N N 282 
PHE CB    HB2    sing N N 283 
PHE CB    HB3    sing N N 284 
PHE CG    CD1    doub Y N 285 
PHE CG    CD2    sing Y N 286 
PHE CD1   CE1    sing Y N 287 
PHE CD1   HD1    sing N N 288 
PHE CD2   CE2    doub Y N 289 
PHE CD2   HD2    sing N N 290 
PHE CE1   CZ     doub Y N 291 
PHE CE1   HE1    sing N N 292 
PHE CE2   CZ     sing Y N 293 
PHE CE2   HE2    sing N N 294 
PHE CZ    HZ     sing N N 295 
PHE OXT   HXT    sing N N 296 
PRO N     CA     sing N N 297 
PRO N     CD     sing N N 298 
PRO N     H      sing N N 299 
PRO CA    C      sing N N 300 
PRO CA    CB     sing N N 301 
PRO CA    HA     sing N N 302 
PRO C     O      doub N N 303 
PRO C     OXT    sing N N 304 
PRO CB    CG     sing N N 305 
PRO CB    HB2    sing N N 306 
PRO CB    HB3    sing N N 307 
PRO CG    CD     sing N N 308 
PRO CG    HG2    sing N N 309 
PRO CG    HG3    sing N N 310 
PRO CD    HD2    sing N N 311 
PRO CD    HD3    sing N N 312 
PRO OXT   HXT    sing N N 313 
SER N     CA     sing N N 314 
SER N     H      sing N N 315 
SER N     H2     sing N N 316 
SER CA    C      sing N N 317 
SER CA    CB     sing N N 318 
SER CA    HA     sing N N 319 
SER C     O      doub N N 320 
SER C     OXT    sing N N 321 
SER CB    OG     sing N N 322 
SER CB    HB2    sing N N 323 
SER CB    HB3    sing N N 324 
SER OG    HG     sing N N 325 
SER OXT   HXT    sing N N 326 
THR N     CA     sing N N 327 
THR N     H      sing N N 328 
THR N     H2     sing N N 329 
THR CA    C      sing N N 330 
THR CA    CB     sing N N 331 
THR CA    HA     sing N N 332 
THR C     O      doub N N 333 
THR C     OXT    sing N N 334 
THR CB    OG1    sing N N 335 
THR CB    CG2    sing N N 336 
THR CB    HB     sing N N 337 
THR OG1   HG1    sing N N 338 
THR CG2   HG21   sing N N 339 
THR CG2   HG22   sing N N 340 
THR CG2   HG23   sing N N 341 
THR OXT   HXT    sing N N 342 
TRP N     CA     sing N N 343 
TRP N     H      sing N N 344 
TRP N     H2     sing N N 345 
TRP CA    C      sing N N 346 
TRP CA    CB     sing N N 347 
TRP CA    HA     sing N N 348 
TRP C     O      doub N N 349 
TRP C     OXT    sing N N 350 
TRP CB    CG     sing N N 351 
TRP CB    HB2    sing N N 352 
TRP CB    HB3    sing N N 353 
TRP CG    CD1    doub Y N 354 
TRP CG    CD2    sing Y N 355 
TRP CD1   NE1    sing Y N 356 
TRP CD1   HD1    sing N N 357 
TRP CD2   CE2    doub Y N 358 
TRP CD2   CE3    sing Y N 359 
TRP NE1   CE2    sing Y N 360 
TRP NE1   HE1    sing N N 361 
TRP CE2   CZ2    sing Y N 362 
TRP CE3   CZ3    doub Y N 363 
TRP CE3   HE3    sing N N 364 
TRP CZ2   CH2    doub Y N 365 
TRP CZ2   HZ2    sing N N 366 
TRP CZ3   CH2    sing Y N 367 
TRP CZ3   HZ3    sing N N 368 
TRP CH2   HH2    sing N N 369 
TRP OXT   HXT    sing N N 370 
TYR N     CA     sing N N 371 
TYR N     H      sing N N 372 
TYR N     H2     sing N N 373 
TYR CA    C      sing N N 374 
TYR CA    CB     sing N N 375 
TYR CA    HA     sing N N 376 
TYR C     O      doub N N 377 
TYR C     OXT    sing N N 378 
TYR CB    CG     sing N N 379 
TYR CB    HB2    sing N N 380 
TYR CB    HB3    sing N N 381 
TYR CG    CD1    doub Y N 382 
TYR CG    CD2    sing Y N 383 
TYR CD1   CE1    sing Y N 384 
TYR CD1   HD1    sing N N 385 
TYR CD2   CE2    doub Y N 386 
TYR CD2   HD2    sing N N 387 
TYR CE1   CZ     doub Y N 388 
TYR CE1   HE1    sing N N 389 
TYR CE2   CZ     sing Y N 390 
TYR CE2   HE2    sing N N 391 
TYR CZ    OH     sing N N 392 
TYR OH    HH     sing N N 393 
TYR OXT   HXT    sing N N 394 
VAL N     CA     sing N N 395 
VAL N     H      sing N N 396 
VAL N     H2     sing N N 397 
VAL CA    C      sing N N 398 
VAL CA    CB     sing N N 399 
VAL CA    HA     sing N N 400 
VAL C     O      doub N N 401 
VAL C     OXT    sing N N 402 
VAL CB    CG1    sing N N 403 
VAL CB    CG2    sing N N 404 
VAL CB    HB     sing N N 405 
VAL CG1   HG11   sing N N 406 
VAL CG1   HG12   sing N N 407 
VAL CG1   HG13   sing N N 408 
VAL CG2   HG21   sing N N 409 
VAL CG2   HG22   sing N N 410 
VAL CG2   HG23   sing N N 411 
VAL OXT   HXT    sing N N 412 
# 
_em_ctf_correction.id        1 
_em_ctf_correction.details   
'Phase correction and amplitude weighting adapted from Grigorieff 1998(after determination of CTF and specimen tilt)' 
_em_ctf_correction.type      . 
# 
_em_image_processing.id                   1 
_em_image_processing.image_recording_id   1 
_em_image_processing.details              ? 
# 
_em_image_recording.details                       ? 
_em_image_recording.id                            1 
_em_image_recording.avg_electron_dose_per_image   15 
_em_image_recording.film_or_detector_model        'KODAK SO-163 FILM' 
_em_image_recording.imaging_id                    1 
_em_image_recording.detector_mode                 ? 
_em_image_recording.average_exposure_time         ? 
_em_image_recording.num_diffraction_images        ? 
_em_image_recording.num_grids_imaged              ? 
_em_image_recording.num_real_images               ? 
# 
loop_
_em_software.id 
_em_software.name 
_em_software.version 
_em_software.category 
_em_software.details 
_em_software.image_processing_id 
1 X-PLOR ? 'MODEL FITTING' ? ? 
2 SPIDER ? RECONSTRUCTION  ? 1 
# 
_em_specimen.experiment_id           1 
_em_specimen.id                      1 
_em_specimen.concentration           2.5 
_em_specimen.vitrification_applied   YES 
_em_specimen.staining_applied        NO 
_em_specimen.embedding_applied       NO 
_em_specimen.shadowing_applied       NO 
_em_specimen.details                 ? 
# 
_em_virus_natural_host.entity_assembly_id   1 
_em_virus_natural_host.id                   1 
_em_virus_natural_host.ncbi_tax_id          4097 
_em_virus_natural_host.organism             'Nicotiana tabacum' 
_em_virus_natural_host.strain               ? 
# 
_pdbx_initial_refinement_model.id               1 
_pdbx_initial_refinement_model.type             'experimental model' 
_pdbx_initial_refinement_model.source_name      PDB 
_pdbx_initial_refinement_model.accession_code   2TMV 
# 
loop_
_pdbx_struct_entity_inst.id 
_pdbx_struct_entity_inst.entity_id 
_pdbx_struct_entity_inst.details 
R 1 'TOBACCO MOSAIC VIRUS RNA' 
A 2 'COAT PROTEIN'             
# 
loop_
_pdbx_struct_msym_gen.msym_id 
_pdbx_struct_msym_gen.oper_expression 
_pdbx_struct_msym_gen.entity_inst_id 
R H R 
A H A 
# 
_atom_sites.entry_id                    2OM3 
_atom_sites.fract_transf_matrix[1][1]   1.000000 
_atom_sites.fract_transf_matrix[1][2]   0.000000 
_atom_sites.fract_transf_matrix[1][3]   0.000000 
_atom_sites.fract_transf_matrix[2][1]   0.000000 
_atom_sites.fract_transf_matrix[2][2]   1.000000 
_atom_sites.fract_transf_matrix[2][3]   0.000000 
_atom_sites.fract_transf_matrix[3][1]   0.000000 
_atom_sites.fract_transf_matrix[3][2]   0.000000 
_atom_sites.fract_transf_matrix[3][3]   1.000000 
_atom_sites.fract_transf_vector[1]      0.00000 
_atom_sites.fract_transf_vector[2]      0.00000 
_atom_sites.fract_transf_vector[3]      0.00000 
# 
loop_
_atom_type.symbol 
C 
N 
O 
P 
S 
# 
loop_