data_2ONF # _entry.id 2ONF # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2ONF pdb_00002onf 10.2210/pdb2onf/pdb RCSB RCSB041351 ? ? WWPDB D_1000041351 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 370499 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 2ONF _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2007-01-23 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of hypothetical protein (NP_393673.1) from Thermoplasma acidophilum at 1.70 A resolution' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 2ONF _cell.length_a 47.070 _cell.length_b 68.550 _cell.length_c 48.670 _cell.angle_alpha 90.000 _cell.angle_beta 98.290 _cell.angle_gamma 90.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 4 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2ONF _symmetry.Int_Tables_number 4 _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Hypothetical protein Ta0195' 16232.896 2 ? ? ? ? 2 non-polymer syn 1,2-ETHANEDIOL 62.068 4 ? ? ? ? 3 non-polymer syn 'COENZYME A' 767.534 1 ? ? ? ? 4 water nat water 18.015 306 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;G(MSE)HVYESDVSWIDDRRTEVSVGDHRIEVDSPPEFGGPEGQLYPETLFPSVLASCLLTTFLEFKDR(MSE)GINLKS WNSHVTAELGPSPEKGFKFHRIKIHVKIGVNDEDKEKIPRA(MSE)QLAEKYCFISRAIRNNVEEIVDYEFV ; _entity_poly.pdbx_seq_one_letter_code_can ;GMHVYESDVSWIDDRRTEVSVGDHRIEVDSPPEFGGPEGQLYPETLFPSVLASCLLTTFLEFKDRMGINLKSWNSHVTAE LGPSPEKGFKFHRIKIHVKIGVNDEDKEKIPRAMQLAEKYCFISRAIRNNVEEIVDYEFV ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier 370499 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 MSE n 1 3 HIS n 1 4 VAL n 1 5 TYR n 1 6 GLU n 1 7 SER n 1 8 ASP n 1 9 VAL n 1 10 SER n 1 11 TRP n 1 12 ILE n 1 13 ASP n 1 14 ASP n 1 15 ARG n 1 16 ARG n 1 17 THR n 1 18 GLU n 1 19 VAL n 1 20 SER n 1 21 VAL n 1 22 GLY n 1 23 ASP n 1 24 HIS n 1 25 ARG n 1 26 ILE n 1 27 GLU n 1 28 VAL n 1 29 ASP n 1 30 SER n 1 31 PRO n 1 32 PRO n 1 33 GLU n 1 34 PHE n 1 35 GLY n 1 36 GLY n 1 37 PRO n 1 38 GLU n 1 39 GLY n 1 40 GLN n 1 41 LEU n 1 42 TYR n 1 43 PRO n 1 44 GLU n 1 45 THR n 1 46 LEU n 1 47 PHE n 1 48 PRO n 1 49 SER n 1 50 VAL n 1 51 LEU n 1 52 ALA n 1 53 SER n 1 54 CYS n 1 55 LEU n 1 56 LEU n 1 57 THR n 1 58 THR n 1 59 PHE n 1 60 LEU n 1 61 GLU n 1 62 PHE n 1 63 LYS n 1 64 ASP n 1 65 ARG n 1 66 MSE n 1 67 GLY n 1 68 ILE n 1 69 ASN n 1 70 LEU n 1 71 LYS n 1 72 SER n 1 73 TRP n 1 74 ASN n 1 75 SER n 1 76 HIS n 1 77 VAL n 1 78 THR n 1 79 ALA n 1 80 GLU n 1 81 LEU n 1 82 GLY n 1 83 PRO n 1 84 SER n 1 85 PRO n 1 86 GLU n 1 87 LYS n 1 88 GLY n 1 89 PHE n 1 90 LYS n 1 91 PHE n 1 92 HIS n 1 93 ARG n 1 94 ILE n 1 95 LYS n 1 96 ILE n 1 97 HIS n 1 98 VAL n 1 99 LYS n 1 100 ILE n 1 101 GLY n 1 102 VAL n 1 103 ASN n 1 104 ASP n 1 105 GLU n 1 106 ASP n 1 107 LYS n 1 108 GLU n 1 109 LYS n 1 110 ILE n 1 111 PRO n 1 112 ARG n 1 113 ALA n 1 114 MSE n 1 115 GLN n 1 116 LEU n 1 117 ALA n 1 118 GLU n 1 119 LYS n 1 120 TYR n 1 121 CYS n 1 122 PHE n 1 123 ILE n 1 124 SER n 1 125 ARG n 1 126 ALA n 1 127 ILE n 1 128 ARG n 1 129 ASN n 1 130 ASN n 1 131 VAL n 1 132 GLU n 1 133 GLU n 1 134 ILE n 1 135 VAL n 1 136 ASP n 1 137 TYR n 1 138 GLU n 1 139 PHE n 1 140 VAL n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Thermoplasma _entity_src_gen.pdbx_gene_src_gene 'NP_393673.1, Ta0195' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'AMRC-C165, DSM1728, IFO15155, JCM9062' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Thermoplasma acidophilum' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 2303 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc 25905 _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain HK100 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name speedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q9HLN2_THEAC _struct_ref.pdbx_db_accession Q9HLN2 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MHVYESDVSWIDDRRTEVSVGDHRIEVDSPPEFGGPEGQLYPETLFPSVLASCLLTTFLEFKDRMGINLKSWNSHVTAEL GPSPEKGFKFHRIKIHVKIGVNDEDKEKIPRAMQLAEKYCFISRAIRNNVEEIVDYEFV ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2ONF A 2 ? 140 ? Q9HLN2 1 ? 139 ? 1 139 2 1 2ONF B 2 ? 140 ? Q9HLN2 1 ? 139 ? 1 139 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2ONF GLY A 1 ? UNP Q9HLN2 ? ? 'expression tag' 0 1 1 2ONF MSE A 2 ? UNP Q9HLN2 MET 1 'modified residue' 1 2 1 2ONF MSE A 66 ? UNP Q9HLN2 MET 65 'modified residue' 65 3 1 2ONF MSE A 114 ? UNP Q9HLN2 MET 113 'modified residue' 113 4 2 2ONF GLY B 1 ? UNP Q9HLN2 ? ? 'expression tag' 0 5 2 2ONF MSE B 2 ? UNP Q9HLN2 MET 1 'modified residue' 1 6 2 2ONF MSE B 66 ? UNP Q9HLN2 MET 65 'modified residue' 65 7 2 2ONF MSE B 114 ? UNP Q9HLN2 MET 113 'modified residue' 113 8 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 COA non-polymer . 'COENZYME A' ? 'C21 H36 N7 O16 P3 S' 767.534 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 2ONF # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.39 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 48.58 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details 'NANODROP, 30.0% PEG-6000, 0.1M MES pH 6.0, VAPOR DIFFUSION, SITTING DROP, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.details 'Flat mirror (vertical focusing)' _diffrn_detector.pdbx_collection_date 2006-12-18 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Single crystal Si(111) bent (horizontal focusing)' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.91837 1.0 2 0.97910 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL11-1 _diffrn_source.type 'SSRL BEAMLINE BL11-1' _diffrn_source.pdbx_wavelength_list '0.91837, 0.97910' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.entry_id 2ONF _reflns.d_resolution_high 1.700 _reflns.d_resolution_low 27.929 _reflns.number_obs 33417 _reflns.pdbx_Rmerge_I_obs 0.032 _reflns.pdbx_netI_over_sigmaI 14.340 _reflns.percent_possible_obs 94.400 _reflns.B_iso_Wilson_estimate 28.911 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.70 1.76 9345 ? ? 0.315 2.6 ? ? ? ? 5702 87.60 1 1 1.76 1.83 9851 ? ? 0.268 3.3 ? ? ? ? 5946 89.80 2 1 1.83 1.91 9374 ? ? 0.21 4.1 ? ? ? ? 5673 88.50 3 1 1.91 2.02 11442 ? ? 0.141 6.2 ? ? ? ? 6933 95.60 4 1 2.02 2.14 9922 ? ? 0.098 8.5 ? ? ? ? 6004 96.10 5 1 2.14 2.31 10968 ? ? 0.072 11.2 ? ? ? ? 6608 96.70 6 1 2.31 2.54 10704 ? ? 0.044 15.2 ? ? ? ? 6415 98.20 7 1 2.54 2.90 10782 ? ? 0.032 20.5 ? ? ? ? 6442 98.60 8 1 2.90 ? 11048 ? ? 0.021 30.0 ? ? ? ? 6530 97.30 9 1 # _refine.entry_id 2ONF _refine.ls_d_res_high 1.700 _refine.ls_d_res_low 27.929 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 99.010 _refine.ls_number_reflns_obs 33399 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1. HYDROGENS HAVE BEEN ADDED IN RIDING POSITIONS. 2. ATOM RECORD CONTAINS RESIDUAL B FACTORS ONLY. 3. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 TO ACCOUNT FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 4. ONE COENZYME A (COA) MONOMER WAS MODELED IN THE ACTIVE SITE BASED ON THE PRESENCE OF CLEAR AND CONCLUSIVE ELECTRON DENSITY. ; _refine.ls_R_factor_all 0.164 _refine.ls_R_factor_R_work 0.162 _refine.ls_R_factor_R_free 0.201 _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 1697 _refine.B_iso_mean 19.658 _refine.aniso_B[1][1] -1.390 _refine.aniso_B[2][2] -0.420 _refine.aniso_B[3][3] 2.090 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.960 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.970 _refine.correlation_coeff_Fo_to_Fc_free 0.952 _refine.pdbx_overall_ESU_R 0.102 _refine.pdbx_overall_ESU_R_Free 0.103 _refine.overall_SU_ML 0.078 _refine.overall_SU_B 4.534 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_obs 0.164 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2260 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 64 _refine_hist.number_atoms_solvent 306 _refine_hist.number_atoms_total 2630 _refine_hist.d_res_high 1.700 _refine_hist.d_res_low 27.929 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 2507 0.017 0.022 ? 'X-RAY DIFFRACTION' ? r_bond_other_d 1765 0.003 0.020 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 3415 1.696 1.984 ? 'X-RAY DIFFRACTION' ? r_angle_other_deg 4307 0.972 3.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 315 5.879 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 125 37.429 24.080 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 440 13.784 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 17 20.214 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 359 0.103 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 2767 0.007 0.020 ? 'X-RAY DIFFRACTION' ? r_gen_planes_other 511 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 413 0.214 0.200 ? 'X-RAY DIFFRACTION' ? r_nbd_other 1836 0.206 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 1137 0.181 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_other 1299 0.085 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 244 0.157 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 5 0.160 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 25 0.253 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 11 0.162 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1621 2.319 3.000 ? 'X-RAY DIFFRACTION' ? r_mcbond_other 579 0.572 3.000 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 2391 2.886 5.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 1154 5.092 8.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 1005 6.907 11.000 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.700 _refine_ls_shell.d_res_low 1.744 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 96.910 _refine_ls_shell.number_reflns_R_work 2292 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.24 _refine_ls_shell.R_factor_R_free 0.289 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 121 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs 2413 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2ONF _struct.title 'Crystal structure of a putative osmotically inducible protein c (ta0195) from thermoplasma acidophilum at 1.70 A resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text 'Structural genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2, oxidoreductase' _struct_keywords.pdbx_keywords OXIDOREDUCTASE _struct_keywords.entry_id 2ONF # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 3 ? G N N 2 ? H N N 4 ? I N N 4 ? # _struct_biol.id 1 _struct_biol.details ;SIZE EXCLUSION CHROMATOGRAPHY WITH STATIC LIGHT SCATTERING SUPPORTS THE ASSIGNMENT OF A DIMER AS A BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE. ; _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 31 ? GLY A 35 ? PRO A 30 GLY A 34 5 ? 5 HELX_P HELX_P2 2 TYR A 42 ? MSE A 66 ? TYR A 41 MSE A 65 1 ? 25 HELX_P HELX_P3 3 ASP A 104 ? GLU A 108 ? ASP A 103 GLU A 107 5 ? 5 HELX_P HELX_P4 4 LYS A 109 ? CYS A 121 ? LYS A 108 CYS A 120 1 ? 13 HELX_P HELX_P5 5 CYS A 121 ? ARG A 128 ? CYS A 120 ARG A 127 1 ? 8 HELX_P HELX_P6 6 PRO B 31 ? GLY B 35 ? PRO B 30 GLY B 34 5 ? 5 HELX_P HELX_P7 7 TYR B 42 ? GLY B 67 ? TYR B 41 GLY B 66 1 ? 26 HELX_P HELX_P8 8 ASP B 104 ? GLU B 108 ? ASP B 103 GLU B 107 5 ? 5 HELX_P HELX_P9 9 LYS B 109 ? CYS B 121 ? LYS B 108 CYS B 120 1 ? 13 HELX_P HELX_P10 10 CYS B 121 ? ARG B 128 ? CYS B 120 ARG B 127 1 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A GLY 1 C ? ? ? 1_555 A MSE 2 N ? ? A GLY 0 A MSE 1 1_555 ? ? ? ? ? ? ? 1.347 ? ? covale2 covale both ? A MSE 2 C ? ? ? 1_555 A HIS 3 N ? ? A MSE 1 A HIS 2 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale3 covale both ? A ARG 65 C ? ? ? 1_555 A MSE 66 N ? ? A ARG 64 A MSE 65 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale4 covale both ? A MSE 66 C ? ? ? 1_555 A GLY 67 N ? ? A MSE 65 A GLY 66 1_555 ? ? ? ? ? ? ? 1.322 ? ? covale5 covale both ? A ALA 113 C ? ? ? 1_555 A MSE 114 N ? ? A ALA 112 A MSE 113 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale6 covale both ? A MSE 114 C ? ? ? 1_555 A GLN 115 N ? ? A MSE 113 A GLN 114 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale7 covale both ? B GLY 1 C ? ? ? 1_555 B MSE 2 N ? ? B GLY 0 B MSE 1 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale8 covale both ? B MSE 2 C ? ? ? 1_555 B HIS 3 N ? ? B MSE 1 B HIS 2 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale9 covale both ? B ARG 65 C ? ? ? 1_555 B MSE 66 N ? ? B ARG 64 B MSE 65 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale10 covale both ? B MSE 66 C ? ? ? 1_555 B GLY 67 N ? ? B MSE 65 B GLY 66 1_555 ? ? ? ? ? ? ? 1.322 ? ? covale11 covale both ? B ALA 113 C ? ? ? 1_555 B MSE 114 N ? ? B ALA 112 B MSE 113 1_555 ? ? ? ? ? ? ? 1.318 ? ? covale12 covale both ? B MSE 114 C ? ? ? 1_555 B GLN 115 N ? ? B MSE 113 B GLN 114 1_555 ? ? ? ? ? ? ? 1.313 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLY _struct_mon_prot_cis.label_seq_id 1 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLY _struct_mon_prot_cis.auth_seq_id 0 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 MSE _struct_mon_prot_cis.pdbx_label_seq_id_2 2 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 MSE _struct_mon_prot_cis.pdbx_auth_seq_id_2 1 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 4.87 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? parallel B 1 2 ? parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 HIS A 24 ? ASP A 29 ? HIS A 23 ASP A 28 A 2 ARG A 16 ? VAL A 21 ? ARG A 15 VAL A 20 A 3 HIS A 3 ? TRP A 11 ? HIS A 2 TRP A 10 A 4 LEU B 70 ? PRO B 83 ? LEU B 69 PRO B 82 A 5 PHE B 89 ? VAL B 102 ? PHE B 88 VAL B 101 A 6 GLU B 132 ? PHE B 139 ? GLU B 131 PHE B 138 B 1 GLU A 132 ? PHE A 139 ? GLU A 131 PHE A 138 B 2 PHE A 89 ? VAL A 102 ? PHE A 88 VAL A 101 B 3 LEU A 70 ? PRO A 83 ? LEU A 69 PRO A 82 B 4 HIS B 3 ? ASP B 13 ? HIS B 2 ASP B 12 B 5 ARG B 16 ? VAL B 21 ? ARG B 15 VAL B 20 B 6 HIS B 24 ? ASP B 29 ? HIS B 23 ASP B 28 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ILE A 26 ? O ILE A 25 N VAL A 19 ? N VAL A 18 A 2 3 O SER A 20 ? O SER A 19 N ASP A 8 ? N ASP A 7 A 3 4 N SER A 7 ? N SER A 6 O VAL B 77 ? O VAL B 76 A 4 5 N ASN B 74 ? N ASN B 73 O LYS B 99 ? O LYS B 98 A 5 6 N ILE B 96 ? N ILE B 95 O ILE B 134 ? O ILE B 133 B 1 2 O ASP A 136 ? O ASP A 135 N VAL A 98 ? N VAL A 97 B 2 3 O GLY A 101 ? O GLY A 100 N LYS A 71 ? N LYS A 70 B 3 4 N VAL A 77 ? N VAL A 76 O SER B 7 ? O SER B 6 B 4 5 N ASP B 8 ? N ASP B 7 O SER B 20 ? O SER B 19 B 5 6 N VAL B 19 ? N VAL B 18 O ILE B 26 ? O ILE B 25 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software B COA 140 ? 26 'BINDING SITE FOR RESIDUE COA B 140' AC2 Software A EDO 140 ? 4 'BINDING SITE FOR RESIDUE EDO A 140' AC3 Software B EDO 141 ? 3 'BINDING SITE FOR RESIDUE EDO B 141' AC4 Software A EDO 141 ? 4 'BINDING SITE FOR RESIDUE EDO A 141' AC5 Software A EDO 142 ? 1 'BINDING SITE FOR RESIDUE EDO A 142' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 26 PHE A 34 ? PHE A 33 . ? 1_555 ? 2 AC1 26 ARG A 65 ? ARG A 64 . ? 1_455 ? 3 AC1 26 LYS A 87 ? LYS A 86 . ? 1_555 ? 4 AC1 26 GLY A 88 ? GLY A 87 . ? 1_555 ? 5 AC1 26 GLU B 33 ? GLU B 32 . ? 1_455 ? 6 AC1 26 THR B 57 ? THR B 56 . ? 1_555 ? 7 AC1 26 PHE B 62 ? PHE B 61 . ? 1_555 ? 8 AC1 26 ARG B 65 ? ARG B 64 . ? 1_555 ? 9 AC1 26 MSE B 66 ? MSE B 65 . ? 1_555 ? 10 AC1 26 ARG B 112 ? ARG B 111 . ? 1_555 ? 11 AC1 26 LEU B 116 ? LEU B 115 . ? 1_555 ? 12 AC1 26 LYS B 119 ? LYS B 118 . ? 1_555 ? 13 AC1 26 TYR B 120 ? TYR B 119 . ? 1_555 ? 14 AC1 26 HOH I . ? HOH B 147 . ? 1_555 ? 15 AC1 26 HOH I . ? HOH B 152 . ? 1_555 ? 16 AC1 26 HOH I . ? HOH B 155 . ? 1_555 ? 17 AC1 26 HOH I . ? HOH B 171 . ? 1_555 ? 18 AC1 26 HOH I . ? HOH B 176 . ? 1_555 ? 19 AC1 26 HOH I . ? HOH B 178 . ? 1_555 ? 20 AC1 26 HOH I . ? HOH B 189 . ? 1_555 ? 21 AC1 26 HOH I . ? HOH B 222 . ? 1_555 ? 22 AC1 26 HOH I . ? HOH B 231 . ? 1_555 ? 23 AC1 26 HOH I . ? HOH B 258 . ? 1_555 ? 24 AC1 26 HOH I . ? HOH B 259 . ? 1_555 ? 25 AC1 26 HOH I . ? HOH B 260 . ? 1_555 ? 26 AC1 26 HOH I . ? HOH B 263 . ? 1_555 ? 27 AC2 4 LYS A 109 ? LYS A 108 . ? 1_555 ? 28 AC2 4 ARG A 112 ? ARG A 111 . ? 1_555 ? 29 AC2 4 HOH H . ? HOH A 143 . ? 1_555 ? 30 AC2 4 HOH H . ? HOH A 273 . ? 1_555 ? 31 AC3 3 LYS A 71 ? LYS A 70 . ? 1_555 ? 32 AC3 3 TRP B 11 ? TRP B 10 . ? 1_555 ? 33 AC3 3 ILE B 12 ? ILE B 11 . ? 1_555 ? 34 AC4 4 TRP A 11 ? TRP A 10 . ? 1_555 ? 35 AC4 4 ILE A 12 ? ILE A 11 . ? 1_555 ? 36 AC4 4 ASP A 13 ? ASP A 12 . ? 1_555 ? 37 AC4 4 LYS B 71 ? LYS B 70 . ? 1_555 ? 38 AC5 1 ARG A 65 ? ARG A 64 . ? 1_555 ? # _atom_sites.entry_id 2ONF _atom_sites.fract_transf_matrix[1][1] 0.02125 _atom_sites.fract_transf_matrix[1][2] 0.00000 _atom_sites.fract_transf_matrix[1][3] 0.00310 _atom_sites.fract_transf_matrix[2][1] 0.00000 _atom_sites.fract_transf_matrix[2][2] 0.01459 _atom_sites.fract_transf_matrix[2][3] 0.00000 _atom_sites.fract_transf_matrix[3][1] 0.00000 _atom_sites.fract_transf_matrix[3][2] 0.00000 _atom_sites.fract_transf_matrix[3][3] 0.02076 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 0 GLY GLY A . n A 1 2 MSE 2 1 1 MSE MSE A . n A 1 3 HIS 3 2 2 HIS HIS A . n A 1 4 VAL 4 3 3 VAL VAL A . n A 1 5 TYR 5 4 4 TYR TYR A . n A 1 6 GLU 6 5 5 GLU GLU A . n A 1 7 SER 7 6 6 SER SER A . n A 1 8 ASP 8 7 7 ASP ASP A . n A 1 9 VAL 9 8 8 VAL VAL A . n A 1 10 SER 10 9 9 SER SER A . n A 1 11 TRP 11 10 10 TRP TRP A . n A 1 12 ILE 12 11 11 ILE ILE A . n A 1 13 ASP 13 12 12 ASP ASP A . n A 1 14 ASP 14 13 13 ASP ASP A . n A 1 15 ARG 15 14 14 ARG ARG A . n A 1 16 ARG 16 15 15 ARG ARG A . n A 1 17 THR 17 16 16 THR THR A . n A 1 18 GLU 18 17 17 GLU GLU A . n A 1 19 VAL 19 18 18 VAL VAL A . n A 1 20 SER 20 19 19 SER SER A . n A 1 21 VAL 21 20 20 VAL VAL A . n A 1 22 GLY 22 21 21 GLY GLY A . n A 1 23 ASP 23 22 22 ASP ASP A . n A 1 24 HIS 24 23 23 HIS HIS A . n A 1 25 ARG 25 24 24 ARG ARG A . n A 1 26 ILE 26 25 25 ILE ILE A . n A 1 27 GLU 27 26 26 GLU GLU A . n A 1 28 VAL 28 27 27 VAL VAL A . n A 1 29 ASP 29 28 28 ASP ASP A . n A 1 30 SER 30 29 29 SER SER A . n A 1 31 PRO 31 30 30 PRO PRO A . n A 1 32 PRO 32 31 31 PRO PRO A . n A 1 33 GLU 33 32 32 GLU GLU A . n A 1 34 PHE 34 33 33 PHE PHE A . n A 1 35 GLY 35 34 34 GLY GLY A . n A 1 36 GLY 36 35 35 GLY GLY A . n A 1 37 PRO 37 36 36 PRO PRO A . n A 1 38 GLU 38 37 37 GLU GLU A . n A 1 39 GLY 39 38 38 GLY GLY A . n A 1 40 GLN 40 39 39 GLN GLN A . n A 1 41 LEU 41 40 40 LEU LEU A . n A 1 42 TYR 42 41 41 TYR TYR A . n A 1 43 PRO 43 42 42 PRO PRO A . n A 1 44 GLU 44 43 43 GLU GLU A . n A 1 45 THR 45 44 44 THR THR A . n A 1 46 LEU 46 45 45 LEU LEU A . n A 1 47 PHE 47 46 46 PHE PHE A . n A 1 48 PRO 48 47 47 PRO PRO A . n A 1 49 SER 49 48 48 SER SER A . n A 1 50 VAL 50 49 49 VAL VAL A . n A 1 51 LEU 51 50 50 LEU LEU A . n A 1 52 ALA 52 51 51 ALA ALA A . n A 1 53 SER 53 52 52 SER SER A . n A 1 54 CYS 54 53 53 CYS CYS A . n A 1 55 LEU 55 54 54 LEU LEU A . n A 1 56 LEU 56 55 55 LEU LEU A . n A 1 57 THR 57 56 56 THR THR A . n A 1 58 THR 58 57 57 THR THR A . n A 1 59 PHE 59 58 58 PHE PHE A . n A 1 60 LEU 60 59 59 LEU LEU A . n A 1 61 GLU 61 60 60 GLU GLU A . n A 1 62 PHE 62 61 61 PHE PHE A . n A 1 63 LYS 63 62 62 LYS LYS A . n A 1 64 ASP 64 63 63 ASP ASP A . n A 1 65 ARG 65 64 64 ARG ARG A . n A 1 66 MSE 66 65 65 MSE MSE A . n A 1 67 GLY 67 66 66 GLY GLY A . n A 1 68 ILE 68 67 67 ILE ILE A . n A 1 69 ASN 69 68 68 ASN ASN A . n A 1 70 LEU 70 69 69 LEU LEU A . n A 1 71 LYS 71 70 70 LYS LYS A . n A 1 72 SER 72 71 71 SER SER A . n A 1 73 TRP 73 72 72 TRP TRP A . n A 1 74 ASN 74 73 73 ASN ASN A . n A 1 75 SER 75 74 74 SER SER A . n A 1 76 HIS 76 75 75 HIS HIS A . n A 1 77 VAL 77 76 76 VAL VAL A . n A 1 78 THR 78 77 77 THR THR A . n A 1 79 ALA 79 78 78 ALA ALA A . n A 1 80 GLU 80 79 79 GLU GLU A . n A 1 81 LEU 81 80 80 LEU LEU A . n A 1 82 GLY 82 81 81 GLY GLY A . n A 1 83 PRO 83 82 82 PRO PRO A . n A 1 84 SER 84 83 83 SER SER A . n A 1 85 PRO 85 84 84 PRO PRO A . n A 1 86 GLU 86 85 85 GLU GLU A . n A 1 87 LYS 87 86 86 LYS LYS A . n A 1 88 GLY 88 87 87 GLY GLY A . n A 1 89 PHE 89 88 88 PHE PHE A . n A 1 90 LYS 90 89 89 LYS LYS A . n A 1 91 PHE 91 90 90 PHE PHE A . n A 1 92 HIS 92 91 91 HIS HIS A . n A 1 93 ARG 93 92 92 ARG ARG A . n A 1 94 ILE 94 93 93 ILE ILE A . n A 1 95 LYS 95 94 94 LYS LYS A . n A 1 96 ILE 96 95 95 ILE ILE A . n A 1 97 HIS 97 96 96 HIS HIS A . n A 1 98 VAL 98 97 97 VAL VAL A . n A 1 99 LYS 99 98 98 LYS LYS A . n A 1 100 ILE 100 99 99 ILE ILE A . n A 1 101 GLY 101 100 100 GLY GLY A . n A 1 102 VAL 102 101 101 VAL VAL A . n A 1 103 ASN 103 102 102 ASN ASN A . n A 1 104 ASP 104 103 103 ASP ASP A . n A 1 105 GLU 105 104 104 GLU GLU A . n A 1 106 ASP 106 105 105 ASP ASP A . n A 1 107 LYS 107 106 106 LYS LYS A . n A 1 108 GLU 108 107 107 GLU GLU A . n A 1 109 LYS 109 108 108 LYS LYS A . n A 1 110 ILE 110 109 109 ILE ILE A . n A 1 111 PRO 111 110 110 PRO PRO A . n A 1 112 ARG 112 111 111 ARG ARG A . n A 1 113 ALA 113 112 112 ALA ALA A . n A 1 114 MSE 114 113 113 MSE MSE A . n A 1 115 GLN 115 114 114 GLN GLN A . n A 1 116 LEU 116 115 115 LEU LEU A . n A 1 117 ALA 117 116 116 ALA ALA A . n A 1 118 GLU 118 117 117 GLU GLU A . n A 1 119 LYS 119 118 118 LYS LYS A . n A 1 120 TYR 120 119 119 TYR TYR A . n A 1 121 CYS 121 120 120 CYS CYS A . n A 1 122 PHE 122 121 121 PHE PHE A . n A 1 123 ILE 123 122 122 ILE ILE A . n A 1 124 SER 124 123 123 SER SER A . n A 1 125 ARG 125 124 124 ARG ARG A . n A 1 126 ALA 126 125 125 ALA ALA A . n A 1 127 ILE 127 126 126 ILE ILE A . n A 1 128 ARG 128 127 127 ARG ARG A . n A 1 129 ASN 129 128 128 ASN ASN A . n A 1 130 ASN 130 129 129 ASN ASN A . n A 1 131 VAL 131 130 130 VAL VAL A . n A 1 132 GLU 132 131 131 GLU GLU A . n A 1 133 GLU 133 132 132 GLU GLU A . n A 1 134 ILE 134 133 133 ILE ILE A . n A 1 135 VAL 135 134 134 VAL VAL A . n A 1 136 ASP 136 135 135 ASP ASP A . n A 1 137 TYR 137 136 136 TYR TYR A . n A 1 138 GLU 138 137 137 GLU GLU A . n A 1 139 PHE 139 138 138 PHE PHE A . n A 1 140 VAL 140 139 139 VAL VAL A . n B 1 1 GLY 1 0 0 GLY GLY B . n B 1 2 MSE 2 1 1 MSE MSE B . n B 1 3 HIS 3 2 2 HIS HIS B . n B 1 4 VAL 4 3 3 VAL VAL B . n B 1 5 TYR 5 4 4 TYR TYR B . n B 1 6 GLU 6 5 5 GLU GLU B . n B 1 7 SER 7 6 6 SER SER B . n B 1 8 ASP 8 7 7 ASP ASP B . n B 1 9 VAL 9 8 8 VAL VAL B . n B 1 10 SER 10 9 9 SER SER B . n B 1 11 TRP 11 10 10 TRP TRP B . n B 1 12 ILE 12 11 11 ILE ILE B . n B 1 13 ASP 13 12 12 ASP ASP B . n B 1 14 ASP 14 13 13 ASP ASP B . n B 1 15 ARG 15 14 14 ARG ARG B . n B 1 16 ARG 16 15 15 ARG ARG B . n B 1 17 THR 17 16 16 THR THR B . n B 1 18 GLU 18 17 17 GLU GLU B . n B 1 19 VAL 19 18 18 VAL VAL B . n B 1 20 SER 20 19 19 SER SER B . n B 1 21 VAL 21 20 20 VAL VAL B . n B 1 22 GLY 22 21 21 GLY GLY B . n B 1 23 ASP 23 22 22 ASP ASP B . n B 1 24 HIS 24 23 23 HIS HIS B . n B 1 25 ARG 25 24 24 ARG ARG B . n B 1 26 ILE 26 25 25 ILE ILE B . n B 1 27 GLU 27 26 26 GLU GLU B . n B 1 28 VAL 28 27 27 VAL VAL B . n B 1 29 ASP 29 28 28 ASP ASP B . n B 1 30 SER 30 29 29 SER SER B . n B 1 31 PRO 31 30 30 PRO PRO B . n B 1 32 PRO 32 31 31 PRO PRO B . n B 1 33 GLU 33 32 32 GLU GLU B . n B 1 34 PHE 34 33 33 PHE PHE B . n B 1 35 GLY 35 34 34 GLY GLY B . n B 1 36 GLY 36 35 35 GLY GLY B . n B 1 37 PRO 37 36 36 PRO PRO B . n B 1 38 GLU 38 37 37 GLU GLU B . n B 1 39 GLY 39 38 38 GLY GLY B . n B 1 40 GLN 40 39 39 GLN GLN B . n B 1 41 LEU 41 40 40 LEU LEU B . n B 1 42 TYR 42 41 41 TYR TYR B . n B 1 43 PRO 43 42 42 PRO PRO B . n B 1 44 GLU 44 43 43 GLU GLU B . n B 1 45 THR 45 44 44 THR THR B . n B 1 46 LEU 46 45 45 LEU LEU B . n B 1 47 PHE 47 46 46 PHE PHE B . n B 1 48 PRO 48 47 47 PRO PRO B . n B 1 49 SER 49 48 48 SER SER B . n B 1 50 VAL 50 49 49 VAL VAL B . n B 1 51 LEU 51 50 50 LEU LEU B . n B 1 52 ALA 52 51 51 ALA ALA B . n B 1 53 SER 53 52 52 SER SER B . n B 1 54 CYS 54 53 53 CYS CYS B . n B 1 55 LEU 55 54 54 LEU LEU B . n B 1 56 LEU 56 55 55 LEU LEU B . n B 1 57 THR 57 56 56 THR THR B . n B 1 58 THR 58 57 57 THR THR B . n B 1 59 PHE 59 58 58 PHE PHE B . n B 1 60 LEU 60 59 59 LEU LEU B . n B 1 61 GLU 61 60 60 GLU GLU B . n B 1 62 PHE 62 61 61 PHE PHE B . n B 1 63 LYS 63 62 62 LYS LYS B . n B 1 64 ASP 64 63 63 ASP ASP B . n B 1 65 ARG 65 64 64 ARG ARG B . n B 1 66 MSE 66 65 65 MSE MSE B . n B 1 67 GLY 67 66 66 GLY GLY B . n B 1 68 ILE 68 67 67 ILE ILE B . n B 1 69 ASN 69 68 68 ASN ASN B . n B 1 70 LEU 70 69 69 LEU LEU B . n B 1 71 LYS 71 70 70 LYS LYS B . n B 1 72 SER 72 71 71 SER SER B . n B 1 73 TRP 73 72 72 TRP TRP B . n B 1 74 ASN 74 73 73 ASN ASN B . n B 1 75 SER 75 74 74 SER SER B . n B 1 76 HIS 76 75 75 HIS HIS B . n B 1 77 VAL 77 76 76 VAL VAL B . n B 1 78 THR 78 77 77 THR THR B . n B 1 79 ALA 79 78 78 ALA ALA B . n B 1 80 GLU 80 79 79 GLU GLU B . n B 1 81 LEU 81 80 80 LEU LEU B . n B 1 82 GLY 82 81 81 GLY GLY B . n B 1 83 PRO 83 82 82 PRO PRO B . n B 1 84 SER 84 83 83 SER SER B . n B 1 85 PRO 85 84 84 PRO PRO B . n B 1 86 GLU 86 85 85 GLU GLU B . n B 1 87 LYS 87 86 86 LYS LYS B . n B 1 88 GLY 88 87 87 GLY GLY B . n B 1 89 PHE 89 88 88 PHE PHE B . n B 1 90 LYS 90 89 89 LYS LYS B . n B 1 91 PHE 91 90 90 PHE PHE B . n B 1 92 HIS 92 91 91 HIS HIS B . n B 1 93 ARG 93 92 92 ARG ARG B . n B 1 94 ILE 94 93 93 ILE ILE B . n B 1 95 LYS 95 94 94 LYS LYS B . n B 1 96 ILE 96 95 95 ILE ILE B . n B 1 97 HIS 97 96 96 HIS HIS B . n B 1 98 VAL 98 97 97 VAL VAL B . n B 1 99 LYS 99 98 98 LYS LYS B . n B 1 100 ILE 100 99 99 ILE ILE B . n B 1 101 GLY 101 100 100 GLY GLY B . n B 1 102 VAL 102 101 101 VAL VAL B . n B 1 103 ASN 103 102 102 ASN ASN B . n B 1 104 ASP 104 103 103 ASP ASP B . n B 1 105 GLU 105 104 104 GLU GLU B . n B 1 106 ASP 106 105 105 ASP ASP B . n B 1 107 LYS 107 106 106 LYS LYS B . n B 1 108 GLU 108 107 107 GLU GLU B . n B 1 109 LYS 109 108 108 LYS LYS B . n B 1 110 ILE 110 109 109 ILE ILE B . n B 1 111 PRO 111 110 110 PRO PRO B . n B 1 112 ARG 112 111 111 ARG ARG B . n B 1 113 ALA 113 112 112 ALA ALA B . n B 1 114 MSE 114 113 113 MSE MSE B . n B 1 115 GLN 115 114 114 GLN GLN B . n B 1 116 LEU 116 115 115 LEU LEU B . n B 1 117 ALA 117 116 116 ALA ALA B . n B 1 118 GLU 118 117 117 GLU GLU B . n B 1 119 LYS 119 118 118 LYS LYS B . n B 1 120 TYR 120 119 119 TYR TYR B . n B 1 121 CYS 121 120 120 CYS CYS B . n B 1 122 PHE 122 121 121 PHE PHE B . n B 1 123 ILE 123 122 122 ILE ILE B . n B 1 124 SER 124 123 123 SER SER B . n B 1 125 ARG 125 124 124 ARG ARG B . n B 1 126 ALA 126 125 125 ALA ALA B . n B 1 127 ILE 127 126 126 ILE ILE B . n B 1 128 ARG 128 127 127 ARG ARG B . n B 1 129 ASN 129 128 128 ASN ASN B . n B 1 130 ASN 130 129 129 ASN ASN B . n B 1 131 VAL 131 130 130 VAL VAL B . n B 1 132 GLU 132 131 131 GLU GLU B . n B 1 133 GLU 133 132 132 GLU GLU B . n B 1 134 ILE 134 133 133 ILE ILE B . n B 1 135 VAL 135 134 134 VAL VAL B . n B 1 136 ASP 136 135 135 ASP ASP B . n B 1 137 TYR 137 136 136 TYR TYR B . n B 1 138 GLU 138 137 137 GLU GLU B . n B 1 139 PHE 139 138 138 PHE PHE B . n B 1 140 VAL 140 139 139 VAL VAL B . n # _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 EDO 1 140 2 EDO EDO A . D 2 EDO 1 141 4 EDO EDO A . E 2 EDO 1 142 5 EDO EDO A . F 3 COA 1 140 1 COA COA B . G 2 EDO 1 141 3 EDO EDO B . H 4 HOH 1 143 11 HOH HOH A . H 4 HOH 2 144 13 HOH HOH A . H 4 HOH 3 145 17 HOH HOH A . H 4 HOH 4 146 18 HOH HOH A . H 4 HOH 5 147 19 HOH HOH A . H 4 HOH 6 148 21 HOH HOH A . H 4 HOH 7 149 26 HOH HOH A . H 4 HOH 8 150 28 HOH HOH A . H 4 HOH 9 151 30 HOH HOH A . H 4 HOH 10 152 38 HOH HOH A . H 4 HOH 11 153 39 HOH HOH A . H 4 HOH 12 154 44 HOH HOH A . H 4 HOH 13 155 45 HOH HOH A . H 4 HOH 14 156 46 HOH HOH A . H 4 HOH 15 157 47 HOH HOH A . H 4 HOH 16 158 48 HOH HOH A . H 4 HOH 17 159 50 HOH HOH A . H 4 HOH 18 160 51 HOH HOH A . H 4 HOH 19 161 53 HOH HOH A . H 4 HOH 20 162 54 HOH HOH A . H 4 HOH 21 163 55 HOH HOH A . H 4 HOH 22 164 61 HOH HOH A . H 4 HOH 23 165 62 HOH HOH A . H 4 HOH 24 166 66 HOH HOH A . H 4 HOH 25 167 68 HOH HOH A . H 4 HOH 26 168 69 HOH HOH A . H 4 HOH 27 169 70 HOH HOH A . H 4 HOH 28 170 72 HOH HOH A . H 4 HOH 29 171 77 HOH HOH A . H 4 HOH 30 172 82 HOH HOH A . H 4 HOH 31 173 83 HOH HOH A . H 4 HOH 32 174 85 HOH HOH A . H 4 HOH 33 175 86 HOH HOH A . H 4 HOH 34 176 87 HOH HOH A . H 4 HOH 35 177 88 HOH HOH A . H 4 HOH 36 178 92 HOH HOH A . H 4 HOH 37 179 93 HOH HOH A . H 4 HOH 38 180 94 HOH HOH A . H 4 HOH 39 181 96 HOH HOH A . H 4 HOH 40 182 97 HOH HOH A . H 4 HOH 41 183 103 HOH HOH A . H 4 HOH 42 184 106 HOH HOH A . H 4 HOH 43 185 108 HOH HOH A . H 4 HOH 44 186 112 HOH HOH A . H 4 HOH 45 187 114 HOH HOH A . H 4 HOH 46 188 115 HOH HOH A . H 4 HOH 47 189 116 HOH HOH A . H 4 HOH 48 190 118 HOH HOH A . H 4 HOH 49 191 119 HOH HOH A . H 4 HOH 50 192 123 HOH HOH A . H 4 HOH 51 193 131 HOH HOH A . H 4 HOH 52 194 133 HOH HOH A . H 4 HOH 53 195 136 HOH HOH A . H 4 HOH 54 196 137 HOH HOH A . H 4 HOH 55 197 140 HOH HOH A . H 4 HOH 56 198 141 HOH HOH A . H 4 HOH 57 199 142 HOH HOH A . H 4 HOH 58 200 143 HOH HOH A . H 4 HOH 59 201 144 HOH HOH A . H 4 HOH 60 202 147 HOH HOH A . H 4 HOH 61 203 149 HOH HOH A . H 4 HOH 62 204 151 HOH HOH A . H 4 HOH 63 205 162 HOH HOH A . H 4 HOH 64 206 168 HOH HOH A . H 4 HOH 65 207 169 HOH HOH A . H 4 HOH 66 208 173 HOH HOH A . H 4 HOH 67 209 174 HOH HOH A . H 4 HOH 68 210 176 HOH HOH A . H 4 HOH 69 211 178 HOH HOH A . H 4 HOH 70 212 179 HOH HOH A . H 4 HOH 71 213 180 HOH HOH A . H 4 HOH 72 214 181 HOH HOH A . H 4 HOH 73 215 183 HOH HOH A . H 4 HOH 74 216 184 HOH HOH A . H 4 HOH 75 217 186 HOH HOH A . H 4 HOH 76 218 187 HOH HOH A . H 4 HOH 77 219 188 HOH HOH A . H 4 HOH 78 220 189 HOH HOH A . H 4 HOH 79 221 192 HOH HOH A . H 4 HOH 80 222 193 HOH HOH A . H 4 HOH 81 223 194 HOH HOH A . H 4 HOH 82 224 195 HOH HOH A . H 4 HOH 83 225 196 HOH HOH A . H 4 HOH 84 226 197 HOH HOH A . H 4 HOH 85 227 198 HOH HOH A . H 4 HOH 86 228 199 HOH HOH A . H 4 HOH 87 229 200 HOH HOH A . H 4 HOH 88 230 202 HOH HOH A . H 4 HOH 89 231 204 HOH HOH A . H 4 HOH 90 232 205 HOH HOH A . H 4 HOH 91 233 206 HOH HOH A . H 4 HOH 92 234 211 HOH HOH A . H 4 HOH 93 235 213 HOH HOH A . H 4 HOH 94 236 214 HOH HOH A . H 4 HOH 95 237 215 HOH HOH A . H 4 HOH 96 238 216 HOH HOH A . H 4 HOH 97 239 217 HOH HOH A . H 4 HOH 98 240 218 HOH HOH A . H 4 HOH 99 241 219 HOH HOH A . H 4 HOH 100 242 223 HOH HOH A . H 4 HOH 101 243 226 HOH HOH A . H 4 HOH 102 244 227 HOH HOH A . H 4 HOH 103 245 228 HOH HOH A . H 4 HOH 104 246 229 HOH HOH A . H 4 HOH 105 247 230 HOH HOH A . H 4 HOH 106 248 231 HOH HOH A . H 4 HOH 107 249 232 HOH HOH A . H 4 HOH 108 250 233 HOH HOH A . H 4 HOH 109 251 234 HOH HOH A . H 4 HOH 110 252 236 HOH HOH A . H 4 HOH 111 253 238 HOH HOH A . H 4 HOH 112 254 242 HOH HOH A . H 4 HOH 113 255 244 HOH HOH A . H 4 HOH 114 256 245 HOH HOH A . H 4 HOH 115 257 246 HOH HOH A . H 4 HOH 116 258 249 HOH HOH A . H 4 HOH 117 259 251 HOH HOH A . H 4 HOH 118 260 253 HOH HOH A . H 4 HOH 119 261 254 HOH HOH A . H 4 HOH 120 262 257 HOH HOH A . H 4 HOH 121 263 258 HOH HOH A . H 4 HOH 122 264 259 HOH HOH A . H 4 HOH 123 265 260 HOH HOH A . H 4 HOH 124 266 261 HOH HOH A . H 4 HOH 125 267 262 HOH HOH A . H 4 HOH 126 268 266 HOH HOH A . H 4 HOH 127 269 267 HOH HOH A . H 4 HOH 128 270 268 HOH HOH A . H 4 HOH 129 271 272 HOH HOH A . H 4 HOH 130 272 273 HOH HOH A . H 4 HOH 131 273 276 HOH HOH A . H 4 HOH 132 274 277 HOH HOH A . H 4 HOH 133 275 280 HOH HOH A . H 4 HOH 134 276 282 HOH HOH A . H 4 HOH 135 277 283 HOH HOH A . H 4 HOH 136 278 287 HOH HOH A . H 4 HOH 137 279 288 HOH HOH A . H 4 HOH 138 280 289 HOH HOH A . H 4 HOH 139 281 290 HOH HOH A . H 4 HOH 140 282 293 HOH HOH A . H 4 HOH 141 283 294 HOH HOH A . H 4 HOH 142 284 295 HOH HOH A . H 4 HOH 143 285 300 HOH HOH A . H 4 HOH 144 286 301 HOH HOH A . H 4 HOH 145 287 302 HOH HOH A . H 4 HOH 146 288 304 HOH HOH A . H 4 HOH 147 289 307 HOH HOH A . H 4 HOH 148 290 311 HOH HOH A . I 4 HOH 1 142 6 HOH HOH B . I 4 HOH 2 143 7 HOH HOH B . I 4 HOH 3 144 8 HOH HOH B . I 4 HOH 4 145 9 HOH HOH B . I 4 HOH 5 146 10 HOH HOH B . I 4 HOH 6 147 12 HOH HOH B . I 4 HOH 7 148 14 HOH HOH B . I 4 HOH 8 149 15 HOH HOH B . I 4 HOH 9 150 16 HOH HOH B . I 4 HOH 10 151 20 HOH HOH B . I 4 HOH 11 152 22 HOH HOH B . I 4 HOH 12 153 23 HOH HOH B . I 4 HOH 13 154 24 HOH HOH B . I 4 HOH 14 155 25 HOH HOH B . I 4 HOH 15 156 27 HOH HOH B . I 4 HOH 16 157 29 HOH HOH B . I 4 HOH 17 158 31 HOH HOH B . I 4 HOH 18 159 32 HOH HOH B . I 4 HOH 19 160 33 HOH HOH B . I 4 HOH 20 161 34 HOH HOH B . I 4 HOH 21 162 35 HOH HOH B . I 4 HOH 22 163 36 HOH HOH B . I 4 HOH 23 164 37 HOH HOH B . I 4 HOH 24 165 40 HOH HOH B . I 4 HOH 25 166 41 HOH HOH B . I 4 HOH 26 167 42 HOH HOH B . I 4 HOH 27 168 43 HOH HOH B . I 4 HOH 28 169 49 HOH HOH B . I 4 HOH 29 170 52 HOH HOH B . I 4 HOH 30 171 56 HOH HOH B . I 4 HOH 31 172 57 HOH HOH B . I 4 HOH 32 173 58 HOH HOH B . I 4 HOH 33 174 59 HOH HOH B . I 4 HOH 34 175 60 HOH HOH B . I 4 HOH 35 176 63 HOH HOH B . I 4 HOH 36 177 64 HOH HOH B . I 4 HOH 37 178 65 HOH HOH B . I 4 HOH 38 179 67 HOH HOH B . I 4 HOH 39 180 71 HOH HOH B . I 4 HOH 40 181 73 HOH HOH B . I 4 HOH 41 182 74 HOH HOH B . I 4 HOH 42 183 75 HOH HOH B . I 4 HOH 43 184 76 HOH HOH B . I 4 HOH 44 185 78 HOH HOH B . I 4 HOH 45 186 79 HOH HOH B . I 4 HOH 46 187 80 HOH HOH B . I 4 HOH 47 188 81 HOH HOH B . I 4 HOH 48 189 84 HOH HOH B . I 4 HOH 49 190 89 HOH HOH B . I 4 HOH 50 191 90 HOH HOH B . I 4 HOH 51 192 91 HOH HOH B . I 4 HOH 52 193 95 HOH HOH B . I 4 HOH 53 194 98 HOH HOH B . I 4 HOH 54 195 99 HOH HOH B . I 4 HOH 55 196 100 HOH HOH B . I 4 HOH 56 197 101 HOH HOH B . I 4 HOH 57 198 102 HOH HOH B . I 4 HOH 58 199 104 HOH HOH B . I 4 HOH 59 200 105 HOH HOH B . I 4 HOH 60 201 107 HOH HOH B . I 4 HOH 61 202 109 HOH HOH B . I 4 HOH 62 203 110 HOH HOH B . I 4 HOH 63 204 111 HOH HOH B . I 4 HOH 64 205 113 HOH HOH B . I 4 HOH 65 206 117 HOH HOH B . I 4 HOH 66 207 120 HOH HOH B . I 4 HOH 67 208 121 HOH HOH B . I 4 HOH 68 209 122 HOH HOH B . I 4 HOH 69 210 124 HOH HOH B . I 4 HOH 70 211 125 HOH HOH B . I 4 HOH 71 212 126 HOH HOH B . I 4 HOH 72 213 127 HOH HOH B . I 4 HOH 73 214 128 HOH HOH B . I 4 HOH 74 215 129 HOH HOH B . I 4 HOH 75 216 130 HOH HOH B . I 4 HOH 76 217 132 HOH HOH B . I 4 HOH 77 218 134 HOH HOH B . I 4 HOH 78 219 135 HOH HOH B . I 4 HOH 79 220 138 HOH HOH B . I 4 HOH 80 221 139 HOH HOH B . I 4 HOH 81 222 145 HOH HOH B . I 4 HOH 82 223 146 HOH HOH B . I 4 HOH 83 224 148 HOH HOH B . I 4 HOH 84 225 150 HOH HOH B . I 4 HOH 85 226 152 HOH HOH B . I 4 HOH 86 227 153 HOH HOH B . I 4 HOH 87 228 154 HOH HOH B . I 4 HOH 88 229 155 HOH HOH B . I 4 HOH 89 230 156 HOH HOH B . I 4 HOH 90 231 157 HOH HOH B . I 4 HOH 91 232 158 HOH HOH B . I 4 HOH 92 233 159 HOH HOH B . I 4 HOH 93 234 160 HOH HOH B . I 4 HOH 94 235 161 HOH HOH B . I 4 HOH 95 236 163 HOH HOH B . I 4 HOH 96 237 164 HOH HOH B . I 4 HOH 97 238 165 HOH HOH B . I 4 HOH 98 239 166 HOH HOH B . I 4 HOH 99 240 167 HOH HOH B . I 4 HOH 100 241 170 HOH HOH B . I 4 HOH 101 242 171 HOH HOH B . I 4 HOH 102 243 172 HOH HOH B . I 4 HOH 103 244 175 HOH HOH B . I 4 HOH 104 245 177 HOH HOH B . I 4 HOH 105 246 182 HOH HOH B . I 4 HOH 106 247 185 HOH HOH B . I 4 HOH 107 248 190 HOH HOH B . I 4 HOH 108 249 191 HOH HOH B . I 4 HOH 109 250 201 HOH HOH B . I 4 HOH 110 251 203 HOH HOH B . I 4 HOH 111 252 207 HOH HOH B . I 4 HOH 112 253 208 HOH HOH B . I 4 HOH 113 254 209 HOH HOH B . I 4 HOH 114 255 210 HOH HOH B . I 4 HOH 115 256 212 HOH HOH B . I 4 HOH 116 257 220 HOH HOH B . I 4 HOH 117 258 221 HOH HOH B . I 4 HOH 118 259 222 HOH HOH B . I 4 HOH 119 260 224 HOH HOH B . I 4 HOH 120 261 225 HOH HOH B . I 4 HOH 121 262 235 HOH HOH B . I 4 HOH 122 263 237 HOH HOH B . I 4 HOH 123 264 239 HOH HOH B . I 4 HOH 124 265 240 HOH HOH B . I 4 HOH 125 266 241 HOH HOH B . I 4 HOH 126 267 243 HOH HOH B . I 4 HOH 127 268 247 HOH HOH B . I 4 HOH 128 269 248 HOH HOH B . I 4 HOH 129 270 250 HOH HOH B . I 4 HOH 130 271 252 HOH HOH B . I 4 HOH 131 272 255 HOH HOH B . I 4 HOH 132 273 256 HOH HOH B . I 4 HOH 133 274 263 HOH HOH B . I 4 HOH 134 275 264 HOH HOH B . I 4 HOH 135 276 265 HOH HOH B . I 4 HOH 136 277 269 HOH HOH B . I 4 HOH 137 278 270 HOH HOH B . I 4 HOH 138 279 271 HOH HOH B . I 4 HOH 139 280 274 HOH HOH B . I 4 HOH 140 281 275 HOH HOH B . I 4 HOH 141 282 278 HOH HOH B . I 4 HOH 142 283 279 HOH HOH B . I 4 HOH 143 284 281 HOH HOH B . I 4 HOH 144 285 285 HOH HOH B . I 4 HOH 145 286 286 HOH HOH B . I 4 HOH 146 287 291 HOH HOH B . I 4 HOH 147 288 292 HOH HOH B . I 4 HOH 148 289 296 HOH HOH B . I 4 HOH 149 290 297 HOH HOH B . I 4 HOH 150 291 298 HOH HOH B . I 4 HOH 151 292 299 HOH HOH B . I 4 HOH 152 293 303 HOH HOH B . I 4 HOH 153 294 305 HOH HOH B . I 4 HOH 154 295 306 HOH HOH B . I 4 HOH 155 296 308 HOH HOH B . I 4 HOH 156 297 309 HOH HOH B . I 4 HOH 157 298 310 HOH HOH B . I 4 HOH 158 299 312 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 2 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 66 A MSE 65 ? MET SELENOMETHIONINE 3 A MSE 114 A MSE 113 ? MET SELENOMETHIONINE 4 B MSE 2 B MSE 1 ? MET SELENOMETHIONINE 5 B MSE 66 B MSE 65 ? MET SELENOMETHIONINE 6 B MSE 114 B MSE 113 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 8390 ? 1 MORE -33 ? 1 'SSA (A^2)' 11930 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-02-06 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-18 5 'Structure model' 1 4 2017-10-25 6 'Structure model' 1 5 2023-01-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Refinement description' 5 5 'Structure model' 'Author supporting evidence' 6 6 'Structure model' 'Database references' 7 6 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' pdbx_struct_assembly_auth_evidence 3 6 'Structure model' database_2 4 6 'Structure model' struct_conn 5 6 'Structure model' struct_ref_seq_dif 6 6 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.classification' 2 4 'Structure model' '_software.name' 3 6 'Structure model' '_database_2.pdbx_DOI' 4 6 'Structure model' '_database_2.pdbx_database_accession' 5 6 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 6 6 'Structure model' '_struct_ref_seq_dif.details' 7 6 'Structure model' '_struct_site.pdbx_auth_asym_id' 8 6 'Structure model' '_struct_site.pdbx_auth_comp_id' 9 6 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 24.8092 _pdbx_refine_tls.origin_y 12.0500 _pdbx_refine_tls.origin_z 10.5566 _pdbx_refine_tls.T[1][1] -0.0425 _pdbx_refine_tls.T[2][2] -0.0208 _pdbx_refine_tls.T[3][3] -0.0570 _pdbx_refine_tls.T[1][2] 0.0134 _pdbx_refine_tls.T[1][3] -0.0007 _pdbx_refine_tls.T[2][3] -0.0105 _pdbx_refine_tls.L[1][1] 1.0474 _pdbx_refine_tls.L[2][2] 0.9590 _pdbx_refine_tls.L[3][3] 0.3031 _pdbx_refine_tls.L[1][2] 0.6326 _pdbx_refine_tls.L[1][3] -0.1780 _pdbx_refine_tls.L[2][3] -0.1927 _pdbx_refine_tls.S[1][1] -0.0170 _pdbx_refine_tls.S[2][2] 0.0109 _pdbx_refine_tls.S[3][3] 0.0061 _pdbx_refine_tls.S[1][2] -0.1015 _pdbx_refine_tls.S[1][3] 0.0270 _pdbx_refine_tls.S[2][3] 0.0178 _pdbx_refine_tls.S[2][1] 0.0081 _pdbx_refine_tls.S[3][1] 0.0103 _pdbx_refine_tls.S[3][2] 0.0121 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 A 1 A 140 ALL A 0 A 139 'X-RAY DIFFRACTION' ? 2 1 B 1 B 140 ALL B 0 B 139 'X-RAY DIFFRACTION' ? # _phasing.method MAD # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 1 SOLVE . ? package 'Tom Terwilliger' terwilliger@LANL.gov phasing http://www.solve.lanl.gov/ ? ? 2 REFMAC 5.2.0019 ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran_77 ? 3 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/xscale_program.html ? ? 4 PDB_EXTRACT 2.000 'April. 3, 2006' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 5 MAR345 CCD ? ? ? ? 'data collection' ? ? ? 6 XDS . ? ? ? ? 'data reduction' ? ? ? 7 # loop_ _pdbx_database_remark.id _pdbx_database_remark.text 300 ; BIOMOLECULE: 1 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT WHICH CONSISTS OF 2 CHAIN(S). SEE REMARK 350 FOR INFORMATION ON GENERATING THE BIOLOGICAL MOLECULE(S). SIZE EXCLUSION CHROMATOGRAPHY WITH STATIC LIGHT SCATTERING SUPPORTS THE ASSIGNMENT OF A DIMER AS A BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE. ; 999 ; SEQUENCE THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. ; # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE B ARG 15 ? ? CZ B ARG 15 ? ? NH1 B ARG 15 ? ? 123.48 120.30 3.18 0.50 N 2 1 NE B ARG 127 ? ? CZ B ARG 127 ? ? NH2 B ARG 127 ? ? 116.60 120.30 -3.70 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ILE A 11 ? ? -81.64 -70.83 2 1 ASP A 13 ? ? 48.85 -130.80 3 1 ARG A 14 ? ? -109.33 48.66 4 1 LYS A 86 ? ? 73.74 165.50 5 1 ASN A 128 ? ? 75.14 -11.58 6 1 ASP B 13 ? ? 48.15 -124.04 7 1 LYS B 86 ? ? 69.66 168.91 8 1 ASN B 128 ? ? 72.44 -9.49 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 94 ? CD ? A LYS 95 CD 2 1 Y 1 A LYS 94 ? CE ? A LYS 95 CE 3 1 Y 1 A LYS 94 ? NZ ? A LYS 95 NZ 4 1 Y 1 B ARG 92 ? CZ ? B ARG 93 CZ 5 1 Y 1 B ARG 92 ? NH1 ? B ARG 93 NH1 6 1 Y 1 B ARG 92 ? NH2 ? B ARG 93 NH2 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 1,2-ETHANEDIOL EDO 3 'COENZYME A' COA 4 water HOH # loop_ _pdbx_struct_assembly_auth_evidence.id _pdbx_struct_assembly_auth_evidence.assembly_id _pdbx_struct_assembly_auth_evidence.experimental_support _pdbx_struct_assembly_auth_evidence.details 1 1 'gel filtration' ? 2 1 'light scattering' ? #