data_2OO9 # _entry.id 2OO9 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2OO9 pdb_00002oo9 10.2210/pdb2oo9/pdb RCSB RCSB041381 ? ? WWPDB D_1000041381 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-02-06 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-12-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' struct_conn 5 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 4 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2OO9 _pdbx_database_status.recvd_initial_deposition_date 2007-01-25 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2OOA . unspecified PDB 2OOB . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Kozlov, G.' 1 'Gehring, K.' 2 # _citation.id primary _citation.title 'Structural basis for UBA-mediated dimerization of c-Cbl ubiquitin ligase.' _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 282 _citation.page_first 27547 _citation.page_last 27555 _citation.year 2007 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17635922 _citation.pdbx_database_id_DOI 10.1074/jbc.M703333200 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kozlov, G.' 1 ? primary 'Peschard, P.' 2 ? primary 'Zimmerman, B.' 3 ? primary 'Lin, T.' 4 ? primary 'Moldoveanu, T.' 5 ? primary 'Mansur-Azzam, N.' 6 ? primary 'Gehring, K.' 7 ? primary 'Park, M.' 8 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'E3 ubiquitin-protein ligase CBL' 5172.457 3 6.3.2.- ? 'UBA domain' ? 2 water nat water 18.015 73 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Signal transduction protein CBL, Proto-oncogene c-CBL, Casitas B-lineage lymphoma proto-oncogene, RING finger protein 55' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code 'GSQLSSEIENL(MSE)SQGYSYQDIQKALVIAQNNIE(MSE)AKNILREFAAAS' _entity_poly.pdbx_seq_one_letter_code_can GSQLSSEIENLMSQGYSYQDIQKALVIAQNNIEMAKNILREFAAAS _entity_poly.pdbx_strand_id A,B,C _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 GLN n 1 4 LEU n 1 5 SER n 1 6 SER n 1 7 GLU n 1 8 ILE n 1 9 GLU n 1 10 ASN n 1 11 LEU n 1 12 MSE n 1 13 SER n 1 14 GLN n 1 15 GLY n 1 16 TYR n 1 17 SER n 1 18 TYR n 1 19 GLN n 1 20 ASP n 1 21 ILE n 1 22 GLN n 1 23 LYS n 1 24 ALA n 1 25 LEU n 1 26 VAL n 1 27 ILE n 1 28 ALA n 1 29 GLN n 1 30 ASN n 1 31 ASN n 1 32 ILE n 1 33 GLU n 1 34 MSE n 1 35 ALA n 1 36 LYS n 1 37 ASN n 1 38 ILE n 1 39 LEU n 1 40 ARG n 1 41 GLU n 1 42 PHE n 1 43 ALA n 1 44 ALA n 1 45 ALA n 1 46 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene 'CBL, CBL2, RNF55' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pGEX-4T-1 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 854 854 GLY GLY A . n A 1 2 SER 2 855 855 SER SER A . n A 1 3 GLN 3 856 856 GLN GLN A . n A 1 4 LEU 4 857 857 LEU LEU A . n A 1 5 SER 5 858 858 SER SER A . n A 1 6 SER 6 859 859 SER SER A . n A 1 7 GLU 7 860 860 GLU GLU A . n A 1 8 ILE 8 861 861 ILE ILE A . n A 1 9 GLU 9 862 862 GLU GLU A . n A 1 10 ASN 10 863 863 ASN ASN A . n A 1 11 LEU 11 864 864 LEU LEU A . n A 1 12 MSE 12 865 865 MSE MSE A . n A 1 13 SER 13 866 866 SER SER A . n A 1 14 GLN 14 867 867 GLN GLN A . n A 1 15 GLY 15 868 868 GLY GLY A . n A 1 16 TYR 16 869 869 TYR TYR A . n A 1 17 SER 17 870 870 SER SER A . n A 1 18 TYR 18 871 871 TYR TYR A . n A 1 19 GLN 19 872 872 GLN GLN A . n A 1 20 ASP 20 873 873 ASP ASP A . n A 1 21 ILE 21 874 874 ILE ILE A . n A 1 22 GLN 22 875 875 GLN GLN A . n A 1 23 LYS 23 876 876 LYS LYS A . n A 1 24 ALA 24 877 877 ALA ALA A . n A 1 25 LEU 25 878 878 LEU LEU A . n A 1 26 VAL 26 879 879 VAL VAL A . n A 1 27 ILE 27 880 880 ILE ILE A . n A 1 28 ALA 28 881 881 ALA ALA A . n A 1 29 GLN 29 882 882 GLN GLN A . n A 1 30 ASN 30 883 883 ASN ASN A . n A 1 31 ASN 31 884 884 ASN ASN A . n A 1 32 ILE 32 885 885 ILE ILE A . n A 1 33 GLU 33 886 886 GLU GLU A . n A 1 34 MSE 34 887 887 MSE MSE A . n A 1 35 ALA 35 888 888 ALA ALA A . n A 1 36 LYS 36 889 889 LYS LYS A . n A 1 37 ASN 37 890 890 ASN ASN A . n A 1 38 ILE 38 891 891 ILE ILE A . n A 1 39 LEU 39 892 892 LEU LEU A . n A 1 40 ARG 40 893 893 ARG ARG A . n A 1 41 GLU 41 894 894 GLU GLU A . n A 1 42 PHE 42 895 895 PHE PHE A . n A 1 43 ALA 43 896 896 ALA ALA A . n A 1 44 ALA 44 897 897 ALA ALA A . n A 1 45 ALA 45 898 898 ALA ALA A . n A 1 46 SER 46 899 899 SER SER A . n B 1 1 GLY 1 854 ? ? ? B . n B 1 2 SER 2 855 855 SER SER B . n B 1 3 GLN 3 856 856 GLN GLN B . n B 1 4 LEU 4 857 857 LEU LEU B . n B 1 5 SER 5 858 858 SER SER B . n B 1 6 SER 6 859 859 SER SER B . n B 1 7 GLU 7 860 860 GLU GLU B . n B 1 8 ILE 8 861 861 ILE ILE B . n B 1 9 GLU 9 862 862 GLU GLU B . n B 1 10 ASN 10 863 863 ASN ASN B . n B 1 11 LEU 11 864 864 LEU LEU B . n B 1 12 MSE 12 865 865 MSE MSE B . n B 1 13 SER 13 866 866 SER SER B . n B 1 14 GLN 14 867 867 GLN GLN B . n B 1 15 GLY 15 868 868 GLY GLY B . n B 1 16 TYR 16 869 869 TYR TYR B . n B 1 17 SER 17 870 870 SER SER B . n B 1 18 TYR 18 871 871 TYR TYR B . n B 1 19 GLN 19 872 872 GLN GLN B . n B 1 20 ASP 20 873 873 ASP ASP B . n B 1 21 ILE 21 874 874 ILE ILE B . n B 1 22 GLN 22 875 875 GLN GLN B . n B 1 23 LYS 23 876 876 LYS LYS B . n B 1 24 ALA 24 877 877 ALA ALA B . n B 1 25 LEU 25 878 878 LEU LEU B . n B 1 26 VAL 26 879 879 VAL VAL B . n B 1 27 ILE 27 880 880 ILE ILE B . n B 1 28 ALA 28 881 881 ALA ALA B . n B 1 29 GLN 29 882 882 GLN GLN B . n B 1 30 ASN 30 883 883 ASN ASN B . n B 1 31 ASN 31 884 884 ASN ASN B . n B 1 32 ILE 32 885 885 ILE ILE B . n B 1 33 GLU 33 886 886 GLU GLU B . n B 1 34 MSE 34 887 887 MSE MSE B . n B 1 35 ALA 35 888 888 ALA ALA B . n B 1 36 LYS 36 889 889 LYS LYS B . n B 1 37 ASN 37 890 890 ASN ASN B . n B 1 38 ILE 38 891 891 ILE ILE B . n B 1 39 LEU 39 892 892 LEU LEU B . n B 1 40 ARG 40 893 893 ARG ARG B . n B 1 41 GLU 41 894 894 GLU GLU B . n B 1 42 PHE 42 895 895 PHE PHE B . n B 1 43 ALA 43 896 896 ALA ALA B . n B 1 44 ALA 44 897 897 ALA ALA B . n B 1 45 ALA 45 898 898 ALA ALA B . n B 1 46 SER 46 899 ? ? ? B . n C 1 1 GLY 1 854 ? ? ? C . n C 1 2 SER 2 855 ? ? ? C . n C 1 3 GLN 3 856 ? ? ? C . n C 1 4 LEU 4 857 ? ? ? C . n C 1 5 SER 5 858 858 SER SER C . n C 1 6 SER 6 859 859 SER SER C . n C 1 7 GLU 7 860 860 GLU GLU C . n C 1 8 ILE 8 861 861 ILE ILE C . n C 1 9 GLU 9 862 862 GLU GLU C . n C 1 10 ASN 10 863 863 ASN ASN C . n C 1 11 LEU 11 864 864 LEU LEU C . n C 1 12 MSE 12 865 865 MSE MSE C . n C 1 13 SER 13 866 866 SER SER C . n C 1 14 GLN 14 867 867 GLN GLN C . n C 1 15 GLY 15 868 868 GLY GLY C . n C 1 16 TYR 16 869 869 TYR TYR C . n C 1 17 SER 17 870 870 SER SER C . n C 1 18 TYR 18 871 871 TYR TYR C . n C 1 19 GLN 19 872 872 GLN GLN C . n C 1 20 ASP 20 873 873 ASP ASP C . n C 1 21 ILE 21 874 874 ILE ILE C . n C 1 22 GLN 22 875 875 GLN GLN C . n C 1 23 LYS 23 876 876 LYS LYS C . n C 1 24 ALA 24 877 877 ALA ALA C . n C 1 25 LEU 25 878 878 LEU LEU C . n C 1 26 VAL 26 879 879 VAL VAL C . n C 1 27 ILE 27 880 880 ILE ILE C . n C 1 28 ALA 28 881 881 ALA ALA C . n C 1 29 GLN 29 882 882 GLN GLN C . n C 1 30 ASN 30 883 883 ASN ASN C . n C 1 31 ASN 31 884 884 ASN ASN C . n C 1 32 ILE 32 885 885 ILE ILE C . n C 1 33 GLU 33 886 886 GLU GLU C . n C 1 34 MSE 34 887 887 MSE MSE C . n C 1 35 ALA 35 888 888 ALA ALA C . n C 1 36 LYS 36 889 889 LYS LYS C . n C 1 37 ASN 37 890 890 ASN ASN C . n C 1 38 ILE 38 891 891 ILE ILE C . n C 1 39 LEU 39 892 892 LEU LEU C . n C 1 40 ARG 40 893 893 ARG ARG C . n C 1 41 GLU 41 894 894 GLU GLU C . n C 1 42 PHE 42 895 895 PHE PHE C . n C 1 43 ALA 43 896 896 ALA ALA C . n C 1 44 ALA 44 897 897 ALA ALA C . n C 1 45 ALA 45 898 898 ALA ALA C . n C 1 46 SER 46 899 ? ? ? C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 HOH 1 4 4 HOH HOH A . D 2 HOH 2 5 5 HOH HOH A . D 2 HOH 3 6 6 HOH HOH A . D 2 HOH 4 8 8 HOH HOH A . D 2 HOH 5 9 9 HOH HOH A . D 2 HOH 6 12 12 HOH HOH A . D 2 HOH 7 16 16 HOH HOH A . D 2 HOH 8 19 19 HOH HOH A . D 2 HOH 9 20 20 HOH HOH A . D 2 HOH 10 30 30 HOH HOH A . D 2 HOH 11 32 32 HOH HOH A . D 2 HOH 12 35 35 HOH HOH A . D 2 HOH 13 36 36 HOH HOH A . D 2 HOH 14 39 39 HOH HOH A . D 2 HOH 15 41 41 HOH HOH A . D 2 HOH 16 43 43 HOH HOH A . D 2 HOH 17 45 45 HOH HOH A . D 2 HOH 18 46 46 HOH HOH A . D 2 HOH 19 49 49 HOH HOH A . D 2 HOH 20 56 56 HOH HOH A . D 2 HOH 21 58 58 HOH HOH A . D 2 HOH 22 63 63 HOH HOH A . D 2 HOH 23 64 64 HOH HOH A . D 2 HOH 24 67 67 HOH HOH A . D 2 HOH 25 70 70 HOH HOH A . D 2 HOH 26 71 71 HOH HOH A . D 2 HOH 27 72 72 HOH HOH A . E 2 HOH 1 1 1 HOH HOH B . E 2 HOH 2 2 2 HOH HOH B . E 2 HOH 3 3 3 HOH HOH B . E 2 HOH 4 10 10 HOH HOH B . E 2 HOH 5 11 11 HOH HOH B . E 2 HOH 6 14 14 HOH HOH B . E 2 HOH 7 15 15 HOH HOH B . E 2 HOH 8 17 17 HOH HOH B . E 2 HOH 9 18 18 HOH HOH B . E 2 HOH 10 21 21 HOH HOH B . E 2 HOH 11 23 23 HOH HOH B . E 2 HOH 12 24 24 HOH HOH B . E 2 HOH 13 26 26 HOH HOH B . E 2 HOH 14 28 28 HOH HOH B . E 2 HOH 15 31 31 HOH HOH B . E 2 HOH 16 33 33 HOH HOH B . E 2 HOH 17 37 37 HOH HOH B . E 2 HOH 18 38 38 HOH HOH B . E 2 HOH 19 40 40 HOH HOH B . E 2 HOH 20 42 42 HOH HOH B . E 2 HOH 21 44 44 HOH HOH B . E 2 HOH 22 48 48 HOH HOH B . E 2 HOH 23 51 51 HOH HOH B . E 2 HOH 24 52 52 HOH HOH B . E 2 HOH 25 54 54 HOH HOH B . E 2 HOH 26 55 55 HOH HOH B . E 2 HOH 27 57 57 HOH HOH B . E 2 HOH 28 59 59 HOH HOH B . E 2 HOH 29 61 61 HOH HOH B . E 2 HOH 30 66 66 HOH HOH B . E 2 HOH 31 68 68 HOH HOH B . E 2 HOH 32 73 73 HOH HOH B . E 2 HOH 33 74 74 HOH HOH B . E 2 HOH 34 75 75 HOH HOH B . E 2 HOH 35 76 76 HOH HOH B . E 2 HOH 36 77 77 HOH HOH B . F 2 HOH 1 7 7 HOH HOH C . F 2 HOH 2 13 13 HOH HOH C . F 2 HOH 3 22 22 HOH HOH C . F 2 HOH 4 25 25 HOH HOH C . F 2 HOH 5 27 27 HOH HOH C . F 2 HOH 6 47 47 HOH HOH C . F 2 HOH 7 53 53 HOH HOH C . F 2 HOH 8 62 62 HOH HOH C . F 2 HOH 9 65 65 HOH HOH C . F 2 HOH 10 78 78 HOH HOH C . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0005 ? 1 HKL-2000 'data collection' . ? 2 HKL-2000 'data reduction' . ? 3 HKL-2000 'data scaling' . ? 4 SOLVE phasing . ? 5 # _cell.entry_id 2OO9 _cell.length_a 82.025 _cell.length_b 82.025 _cell.length_c 56.194 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2OO9 _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? # _exptl.entry_id 2OO9 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.05 _exptl_crystal.density_percent_sol 59.61 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_details '3.8M sodium formate, 0.1M Tris, 4% (v/v) glycerol, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2006-02-13 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si (111) monochromator' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9790 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'CHESS BEAMLINE F2' _diffrn_source.pdbx_synchrotron_site CHESS _diffrn_source.pdbx_synchrotron_beamline F2 _diffrn_source.pdbx_wavelength 0.9790 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 2OO9 _reflns.observed_criterion_sigma_F 1.0 _reflns.observed_criterion_sigma_I 1.0 _reflns.d_resolution_high 2.1 _reflns.d_resolution_low 58.0 _reflns.number_all 11674 _reflns.number_obs 11572 _reflns.percent_possible_obs 99.1 _reflns.pdbx_Rmerge_I_obs 0.061 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 18.2 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 7.3 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.1 _reflns_shell.d_res_low 2.18 _reflns_shell.percent_possible_all 95.9 _reflns_shell.Rmerge_I_obs 0.313 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 4.9 _reflns_shell.pdbx_redundancy 5.7 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 756 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 2OO9 _refine.ls_number_reflns_obs 11010 _refine.ls_number_reflns_all 11652 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 19.60 _refine.ls_d_res_high 2.10 _refine.ls_percent_reflns_obs 99.20 _refine.ls_R_factor_obs 0.21838 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2163 _refine.ls_R_factor_R_free 0.26009 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.7 _refine.ls_number_reflns_R_free 549 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.942 _refine.correlation_coeff_Fo_to_Fc_free 0.909 _refine.B_iso_mean 33.206 _refine.aniso_B[1][1] 0.04 _refine.aniso_B[2][2] 0.04 _refine.aniso_B[3][3] -0.09 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.188 _refine.pdbx_overall_ESU_R_Free 0.175 _refine.overall_SU_ML 0.123 _refine.overall_SU_B 8.835 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1019 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 73 _refine_hist.number_atoms_total 1092 _refine_hist.d_res_high 2.10 _refine_hist.d_res_low 19.60 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.023 0.022 ? 1025 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.629 1.952 ? 1374 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.994 5.000 ? 128 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 46.971 27.170 ? 53 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 16.050 15.000 ? 197 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 14.416 15.000 ? 3 'X-RAY DIFFRACTION' ? r_chiral_restr 0.115 0.200 ? 156 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.008 0.020 ? 760 'X-RAY DIFFRACTION' ? r_nbd_refined 0.226 0.200 ? 480 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.296 0.200 ? 732 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.196 0.200 ? 69 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.276 0.200 ? 31 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.133 0.200 ? 8 'X-RAY DIFFRACTION' ? r_mcbond_it 1.438 1.500 ? 682 'X-RAY DIFFRACTION' ? r_mcangle_it 1.628 2.000 ? 1027 'X-RAY DIFFRACTION' ? r_scbond_it 3.246 3.000 ? 400 'X-RAY DIFFRACTION' ? r_scangle_it 4.460 4.500 ? 347 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.100 _refine_ls_shell.d_res_low 2.154 _refine_ls_shell.number_reflns_R_work 756 _refine_ls_shell.R_factor_R_work 0.237 _refine_ls_shell.percent_reflns_obs 95.26 _refine_ls_shell.R_factor_R_free 0.214 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 47 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 2OO9 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 2OO9 _struct.title 'crystal structure of the UBA domain from human c-Cbl ubiquitin ligase' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2OO9 _struct_keywords.pdbx_keywords LIGASE _struct_keywords.text 'alpha-helical domain, homodimer, LIGASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 2 ? E N N 2 ? F N N 2 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code CBL_HUMAN _struct_ref.pdbx_db_accession P22681 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code QLSSEIENLMSQGYSYQDIQKALVIAQNNIEMAKNILREF _struct_ref.pdbx_align_begin 856 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2OO9 A 3 ? 42 ? P22681 856 ? 895 ? 856 895 2 1 2OO9 B 3 ? 42 ? P22681 856 ? 895 ? 856 895 3 1 2OO9 C 3 ? 42 ? P22681 856 ? 895 ? 856 895 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2OO9 GLY A 1 ? UNP P22681 ? ? 'cloning artifact' 854 1 1 2OO9 SER A 2 ? UNP P22681 ? ? 'cloning artifact' 855 2 1 2OO9 MSE A 12 ? UNP P22681 MET 865 'modified residue' 865 3 1 2OO9 MSE A 34 ? UNP P22681 MET 887 'modified residue' 887 4 1 2OO9 ALA A 43 ? UNP P22681 ? ? 'cloning artifact' 896 5 1 2OO9 ALA A 44 ? UNP P22681 ? ? 'cloning artifact' 897 6 1 2OO9 ALA A 45 ? UNP P22681 ? ? 'cloning artifact' 898 7 1 2OO9 SER A 46 ? UNP P22681 ? ? 'cloning artifact' 899 8 2 2OO9 GLY B 1 ? UNP P22681 ? ? 'cloning artifact' 854 9 2 2OO9 SER B 2 ? UNP P22681 ? ? 'cloning artifact' 855 10 2 2OO9 MSE B 12 ? UNP P22681 MET 865 'modified residue' 865 11 2 2OO9 MSE B 34 ? UNP P22681 MET 887 'modified residue' 887 12 2 2OO9 ALA B 43 ? UNP P22681 ? ? 'cloning artifact' 896 13 2 2OO9 ALA B 44 ? UNP P22681 ? ? 'cloning artifact' 897 14 2 2OO9 ALA B 45 ? UNP P22681 ? ? 'cloning artifact' 898 15 2 2OO9 SER B 46 ? UNP P22681 ? ? 'cloning artifact' 899 16 3 2OO9 GLY C 1 ? UNP P22681 ? ? 'cloning artifact' 854 17 3 2OO9 SER C 2 ? UNP P22681 ? ? 'cloning artifact' 855 18 3 2OO9 MSE C 12 ? UNP P22681 MET 865 'modified residue' 865 19 3 2OO9 MSE C 34 ? UNP P22681 MET 887 'modified residue' 887 20 3 2OO9 ALA C 43 ? UNP P22681 ? ? 'cloning artifact' 896 21 3 2OO9 ALA C 44 ? UNP P22681 ? ? 'cloning artifact' 897 22 3 2OO9 ALA C 45 ? UNP P22681 ? ? 'cloning artifact' 898 23 3 2OO9 SER C 46 ? UNP P22681 ? ? 'cloning artifact' 899 24 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA dimeric 2 2 author_defined_assembly ? dimeric 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1080 ? 1 MORE -11 ? 1 'SSA (A^2)' 5640 ? # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,D,E 2 1,2 C,F # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 7_554 y,x,-z-1 0.0000000000 1.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 -56.1940000000 # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 2 ? GLN A 14 ? SER A 855 GLN A 867 1 ? 13 HELX_P HELX_P2 2 SER A 17 ? ALA A 28 ? SER A 870 ALA A 881 1 ? 12 HELX_P HELX_P3 3 ASN A 31 ? ALA A 43 ? ASN A 884 ALA A 896 1 ? 13 HELX_P HELX_P4 4 SER B 2 ? GLY B 15 ? SER B 855 GLY B 868 1 ? 14 HELX_P HELX_P5 5 SER B 17 ? ALA B 28 ? SER B 870 ALA B 881 1 ? 12 HELX_P HELX_P6 6 ASN B 31 ? ALA B 43 ? ASN B 884 ALA B 896 1 ? 13 HELX_P HELX_P7 7 SER C 5 ? GLN C 14 ? SER C 858 GLN C 867 1 ? 10 HELX_P HELX_P8 8 SER C 17 ? ALA C 28 ? SER C 870 ALA C 881 1 ? 12 HELX_P HELX_P9 9 ASN C 31 ? ALA C 43 ? ASN C 884 ALA C 896 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A LEU 11 C ? ? ? 1_555 A MSE 12 N ? ? A LEU 864 A MSE 865 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale2 covale both ? A MSE 12 C ? ? ? 1_555 A SER 13 N ? ? A MSE 865 A SER 866 1_555 ? ? ? ? ? ? ? 1.345 ? ? covale3 covale both ? A GLU 33 C ? ? ? 1_555 A MSE 34 N ? ? A GLU 886 A MSE 887 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale4 covale both ? A MSE 34 C ? ? ? 1_555 A ALA 35 N ? ? A MSE 887 A ALA 888 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale5 covale both ? B LEU 11 C ? ? ? 1_555 B MSE 12 N ? ? B LEU 864 B MSE 865 1_555 ? ? ? ? ? ? ? 1.311 ? ? covale6 covale both ? B MSE 12 C ? ? ? 1_555 B SER 13 N ? ? B MSE 865 B SER 866 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale7 covale both ? B GLU 33 C ? ? ? 1_555 B MSE 34 N ? ? B GLU 886 B MSE 887 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale8 covale both ? B MSE 34 C ? ? ? 1_555 B ALA 35 N ? ? B MSE 887 B ALA 888 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale9 covale both ? C LEU 11 C ? ? ? 1_555 C MSE 12 N ? ? C LEU 864 C MSE 865 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale10 covale both ? C MSE 12 C ? ? ? 1_555 C SER 13 N ? ? C MSE 865 C SER 866 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale11 covale both ? C GLU 33 C ? ? ? 1_555 C MSE 34 N ? ? C GLU 886 C MSE 887 1_555 ? ? ? ? ? ? ? 1.401 ? ? covale12 covale both ? C MSE 34 C ? ? ? 1_555 C ALA 35 N ? ? C MSE 887 C ALA 888 1_555 ? ? ? ? ? ? ? 1.339 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 B _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 1 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 B _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 66 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.90 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 C _pdbx_validate_rmsd_bond.auth_asym_id_1 C _pdbx_validate_rmsd_bond.auth_comp_id_1 GLU _pdbx_validate_rmsd_bond.auth_seq_id_1 886 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 O _pdbx_validate_rmsd_bond.auth_asym_id_2 C _pdbx_validate_rmsd_bond.auth_comp_id_2 GLU _pdbx_validate_rmsd_bond.auth_seq_id_2 886 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.370 _pdbx_validate_rmsd_bond.bond_target_value 1.229 _pdbx_validate_rmsd_bond.bond_deviation 0.141 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.019 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 883 ? ? 55.69 19.66 2 1 PHE B 895 ? ? -130.97 -33.67 3 1 ALA C 881 ? ? -66.63 8.26 4 1 ASN C 883 ? ? 57.39 13.83 # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 12 A MSE 865 ? MET SELENOMETHIONINE 2 A MSE 34 A MSE 887 ? MET SELENOMETHIONINE 3 B MSE 12 B MSE 865 ? MET SELENOMETHIONINE 4 B MSE 34 B MSE 887 ? MET SELENOMETHIONINE 5 C MSE 12 C MSE 865 ? MET SELENOMETHIONINE 6 C MSE 34 C MSE 887 ? MET SELENOMETHIONINE # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id B _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 2 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id E _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.pdbx_refine_id 1 ? refined 45.1406 11.4035 -7.7750 0.0796 0.1337 0.0919 0.0682 0.0270 0.0437 7.2972 7.1952 3.7815 1.8672 -2.3453 0.9633 -0.0143 -0.6951 0.2421 0.4754 -0.0898 -0.6628 0.1400 0.6606 0.1041 'X-RAY DIFFRACTION' 2 ? refined 35.4077 15.8709 -6.6453 0.1260 0.0270 0.1620 0.0082 0.0348 0.0200 6.1718 5.7749 8.4485 -0.8709 -0.2174 -1.6466 0.0624 -0.0711 0.4633 0.2618 -0.1041 -0.0410 -0.4878 0.0541 0.0416 'X-RAY DIFFRACTION' 3 ? refined 34.1030 6.0618 -7.8236 0.1585 0.0217 0.0743 0.0286 0.0172 0.0179 9.9151 5.4487 5.9625 0.4411 -0.6762 0.7446 0.1140 0.2246 -0.2932 -0.4604 -0.0646 -0.2643 0.4856 0.1058 -0.0494 'X-RAY DIFFRACTION' 4 ? refined 12.2895 11.8064 -8.8804 0.0724 0.0603 0.1146 0.0048 -0.1100 -0.0536 7.9986 7.7563 10.5265 -5.5868 -3.7820 7.4551 0.4793 0.6742 -0.3970 -0.3882 -0.6605 0.7697 0.0686 -0.5491 0.1812 'X-RAY DIFFRACTION' 5 ? refined 21.8006 10.1206 -3.4513 0.1104 0.0860 0.0960 -0.0050 0.0076 -0.0031 6.1723 6.6721 5.1384 -0.9863 1.0310 0.8976 0.2035 -0.0534 -0.1470 -0.0624 -0.2300 0.2431 0.3032 0.0783 0.0266 'X-RAY DIFFRACTION' 6 ? refined 24.7403 12.6598 -12.0456 0.1546 0.0520 0.0465 0.0702 -0.0228 0.0109 8.8063 4.1780 7.5922 -2.2353 -5.3998 1.3961 0.3656 0.7724 -0.1451 -0.6463 -0.4870 0.2455 -0.2345 -0.2839 0.1214 'X-RAY DIFFRACTION' 7 ? refined 29.4034 25.7063 -10.6573 0.4064 -0.0907 -0.0073 0.1891 -0.0538 0.0790 47.0947 6.9486 12.4670 13.1544 10.1230 3.4506 -0.8431 -0.1235 1.1377 1.5179 0.7569 0.3309 -0.7462 0.0679 0.0862 'X-RAY DIFFRACTION' 8 ? refined 32.0634 26.3618 -20.1193 0.1971 -0.0260 0.1429 -0.0735 -0.2504 0.2023 6.1863 15.3025 18.1283 -7.0284 -8.3532 4.8819 -0.4899 0.0644 0.7439 0.6798 0.7009 -1.6864 -1.2267 1.3205 -0.2110 'X-RAY DIFFRACTION' 9 ? refined 25.0314 29.7584 -22.9110 0.2503 -0.1236 0.0927 0.0242 -0.2900 0.0842 10.1474 17.5158 26.8746 -1.5406 3.6223 -0.3971 -0.7685 -0.2713 0.9653 0.7834 -0.1785 -0.0477 -1.7758 -0.3584 0.9470 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 A 854 A 1 A 871 A 18 ? 'X-RAY DIFFRACTION' ? 2 2 A 872 A 19 A 888 A 35 ? 'X-RAY DIFFRACTION' ? 3 3 A 889 A 36 A 899 A 46 ? 'X-RAY DIFFRACTION' ? 4 4 B 855 B 2 B 869 B 16 ? 'X-RAY DIFFRACTION' ? 5 5 B 870 B 17 B 887 B 34 ? 'X-RAY DIFFRACTION' ? 6 6 B 888 B 35 B 898 B 45 ? 'X-RAY DIFFRACTION' ? 7 7 C 858 C 5 C 866 C 13 ? 'X-RAY DIFFRACTION' ? 8 8 C 867 C 14 C 886 C 33 ? 'X-RAY DIFFRACTION' ? 9 9 C 887 C 34 C 898 C 45 ? 'X-RAY DIFFRACTION' ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 B GLY 854 ? B GLY 1 2 1 Y 1 B SER 899 ? B SER 46 3 1 Y 1 C GLY 854 ? C GLY 1 4 1 Y 1 C SER 855 ? C SER 2 5 1 Y 1 C GLN 856 ? C GLN 3 6 1 Y 1 C LEU 857 ? C LEU 4 7 1 Y 1 C SER 899 ? C SER 46 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 HOH O O N N 123 HOH H1 H N N 124 HOH H2 H N N 125 ILE N N N N 126 ILE CA C N S 127 ILE C C N N 128 ILE O O N N 129 ILE CB C N S 130 ILE CG1 C N N 131 ILE CG2 C N N 132 ILE CD1 C N N 133 ILE OXT O N N 134 ILE H H N N 135 ILE H2 H N N 136 ILE HA H N N 137 ILE HB H N N 138 ILE HG12 H N N 139 ILE HG13 H N N 140 ILE HG21 H N N 141 ILE HG22 H N N 142 ILE HG23 H N N 143 ILE HD11 H N N 144 ILE HD12 H N N 145 ILE HD13 H N N 146 ILE HXT H N N 147 LEU N N N N 148 LEU CA C N S 149 LEU C C N N 150 LEU O O N N 151 LEU CB C N N 152 LEU CG C N N 153 LEU CD1 C N N 154 LEU CD2 C N N 155 LEU OXT O N N 156 LEU H H N N 157 LEU H2 H N N 158 LEU HA H N N 159 LEU HB2 H N N 160 LEU HB3 H N N 161 LEU HG H N N 162 LEU HD11 H N N 163 LEU HD12 H N N 164 LEU HD13 H N N 165 LEU HD21 H N N 166 LEU HD22 H N N 167 LEU HD23 H N N 168 LEU HXT H N N 169 LYS N N N N 170 LYS CA C N S 171 LYS C C N N 172 LYS O O N N 173 LYS CB C N N 174 LYS CG C N N 175 LYS CD C N N 176 LYS CE C N N 177 LYS NZ N N N 178 LYS OXT O N N 179 LYS H H N N 180 LYS H2 H N N 181 LYS HA H N N 182 LYS HB2 H N N 183 LYS HB3 H N N 184 LYS HG2 H N N 185 LYS HG3 H N N 186 LYS HD2 H N N 187 LYS HD3 H N N 188 LYS HE2 H N N 189 LYS HE3 H N N 190 LYS HZ1 H N N 191 LYS HZ2 H N N 192 LYS HZ3 H N N 193 LYS HXT H N N 194 MET N N N N 195 MET CA C N S 196 MET C C N N 197 MET O O N N 198 MET CB C N N 199 MET CG C N N 200 MET SD S N N 201 MET CE C N N 202 MET OXT O N N 203 MET H H N N 204 MET H2 H N N 205 MET HA H N N 206 MET HB2 H N N 207 MET HB3 H N N 208 MET HG2 H N N 209 MET HG3 H N N 210 MET HE1 H N N 211 MET HE2 H N N 212 MET HE3 H N N 213 MET HXT H N N 214 MSE N N N N 215 MSE CA C N S 216 MSE C C N N 217 MSE O O N N 218 MSE OXT O N N 219 MSE CB C N N 220 MSE CG C N N 221 MSE SE SE N N 222 MSE CE C N N 223 MSE H H N N 224 MSE H2 H N N 225 MSE HA H N N 226 MSE HXT H N N 227 MSE HB2 H N N 228 MSE HB3 H N N 229 MSE HG2 H N N 230 MSE HG3 H N N 231 MSE HE1 H N N 232 MSE HE2 H N N 233 MSE HE3 H N N 234 PHE N N N N 235 PHE CA C N S 236 PHE C C N N 237 PHE O O N N 238 PHE CB C N N 239 PHE CG C Y N 240 PHE CD1 C Y N 241 PHE CD2 C Y N 242 PHE CE1 C Y N 243 PHE CE2 C Y N 244 PHE CZ C Y N 245 PHE OXT O N N 246 PHE H H N N 247 PHE H2 H N N 248 PHE HA H N N 249 PHE HB2 H N N 250 PHE HB3 H N N 251 PHE HD1 H N N 252 PHE HD2 H N N 253 PHE HE1 H N N 254 PHE HE2 H N N 255 PHE HZ H N N 256 PHE HXT H N N 257 SER N N N N 258 SER CA C N S 259 SER C C N N 260 SER O O N N 261 SER CB C N N 262 SER OG O N N 263 SER OXT O N N 264 SER H H N N 265 SER H2 H N N 266 SER HA H N N 267 SER HB2 H N N 268 SER HB3 H N N 269 SER HG H N N 270 SER HXT H N N 271 TYR N N N N 272 TYR CA C N S 273 TYR C C N N 274 TYR O O N N 275 TYR CB C N N 276 TYR CG C Y N 277 TYR CD1 C Y N 278 TYR CD2 C Y N 279 TYR CE1 C Y N 280 TYR CE2 C Y N 281 TYR CZ C Y N 282 TYR OH O N N 283 TYR OXT O N N 284 TYR H H N N 285 TYR H2 H N N 286 TYR HA H N N 287 TYR HB2 H N N 288 TYR HB3 H N N 289 TYR HD1 H N N 290 TYR HD2 H N N 291 TYR HE1 H N N 292 TYR HE2 H N N 293 TYR HH H N N 294 TYR HXT H N N 295 VAL N N N N 296 VAL CA C N S 297 VAL C C N N 298 VAL O O N N 299 VAL CB C N N 300 VAL CG1 C N N 301 VAL CG2 C N N 302 VAL OXT O N N 303 VAL H H N N 304 VAL H2 H N N 305 VAL HA H N N 306 VAL HB H N N 307 VAL HG11 H N N 308 VAL HG12 H N N 309 VAL HG13 H N N 310 VAL HG21 H N N 311 VAL HG22 H N N 312 VAL HG23 H N N 313 VAL HXT H N N 314 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HOH O H1 sing N N 116 HOH O H2 sing N N 117 ILE N CA sing N N 118 ILE N H sing N N 119 ILE N H2 sing N N 120 ILE CA C sing N N 121 ILE CA CB sing N N 122 ILE CA HA sing N N 123 ILE C O doub N N 124 ILE C OXT sing N N 125 ILE CB CG1 sing N N 126 ILE CB CG2 sing N N 127 ILE CB HB sing N N 128 ILE CG1 CD1 sing N N 129 ILE CG1 HG12 sing N N 130 ILE CG1 HG13 sing N N 131 ILE CG2 HG21 sing N N 132 ILE CG2 HG22 sing N N 133 ILE CG2 HG23 sing N N 134 ILE CD1 HD11 sing N N 135 ILE CD1 HD12 sing N N 136 ILE CD1 HD13 sing N N 137 ILE OXT HXT sing N N 138 LEU N CA sing N N 139 LEU N H sing N N 140 LEU N H2 sing N N 141 LEU CA C sing N N 142 LEU CA CB sing N N 143 LEU CA HA sing N N 144 LEU C O doub N N 145 LEU C OXT sing N N 146 LEU CB CG sing N N 147 LEU CB HB2 sing N N 148 LEU CB HB3 sing N N 149 LEU CG CD1 sing N N 150 LEU CG CD2 sing N N 151 LEU CG HG sing N N 152 LEU CD1 HD11 sing N N 153 LEU CD1 HD12 sing N N 154 LEU CD1 HD13 sing N N 155 LEU CD2 HD21 sing N N 156 LEU CD2 HD22 sing N N 157 LEU CD2 HD23 sing N N 158 LEU OXT HXT sing N N 159 LYS N CA sing N N 160 LYS N H sing N N 161 LYS N H2 sing N N 162 LYS CA C sing N N 163 LYS CA CB sing N N 164 LYS CA HA sing N N 165 LYS C O doub N N 166 LYS C OXT sing N N 167 LYS CB CG sing N N 168 LYS CB HB2 sing N N 169 LYS CB HB3 sing N N 170 LYS CG CD sing N N 171 LYS CG HG2 sing N N 172 LYS CG HG3 sing N N 173 LYS CD CE sing N N 174 LYS CD HD2 sing N N 175 LYS CD HD3 sing N N 176 LYS CE NZ sing N N 177 LYS CE HE2 sing N N 178 LYS CE HE3 sing N N 179 LYS NZ HZ1 sing N N 180 LYS NZ HZ2 sing N N 181 LYS NZ HZ3 sing N N 182 LYS OXT HXT sing N N 183 MET N CA sing N N 184 MET N H sing N N 185 MET N H2 sing N N 186 MET CA C sing N N 187 MET CA CB sing N N 188 MET CA HA sing N N 189 MET C O doub N N 190 MET C OXT sing N N 191 MET CB CG sing N N 192 MET CB HB2 sing N N 193 MET CB HB3 sing N N 194 MET CG SD sing N N 195 MET CG HG2 sing N N 196 MET CG HG3 sing N N 197 MET SD CE sing N N 198 MET CE HE1 sing N N 199 MET CE HE2 sing N N 200 MET CE HE3 sing N N 201 MET OXT HXT sing N N 202 MSE N CA sing N N 203 MSE N H sing N N 204 MSE N H2 sing N N 205 MSE CA C sing N N 206 MSE CA CB sing N N 207 MSE CA HA sing N N 208 MSE C O doub N N 209 MSE C OXT sing N N 210 MSE OXT HXT sing N N 211 MSE CB CG sing N N 212 MSE CB HB2 sing N N 213 MSE CB HB3 sing N N 214 MSE CG SE sing N N 215 MSE CG HG2 sing N N 216 MSE CG HG3 sing N N 217 MSE SE CE sing N N 218 MSE CE HE1 sing N N 219 MSE CE HE2 sing N N 220 MSE CE HE3 sing N N 221 PHE N CA sing N N 222 PHE N H sing N N 223 PHE N H2 sing N N 224 PHE CA C sing N N 225 PHE CA CB sing N N 226 PHE CA HA sing N N 227 PHE C O doub N N 228 PHE C OXT sing N N 229 PHE CB CG sing N N 230 PHE CB HB2 sing N N 231 PHE CB HB3 sing N N 232 PHE CG CD1 doub Y N 233 PHE CG CD2 sing Y N 234 PHE CD1 CE1 sing Y N 235 PHE CD1 HD1 sing N N 236 PHE CD2 CE2 doub Y N 237 PHE CD2 HD2 sing N N 238 PHE CE1 CZ doub Y N 239 PHE CE1 HE1 sing N N 240 PHE CE2 CZ sing Y N 241 PHE CE2 HE2 sing N N 242 PHE CZ HZ sing N N 243 PHE OXT HXT sing N N 244 SER N CA sing N N 245 SER N H sing N N 246 SER N H2 sing N N 247 SER CA C sing N N 248 SER CA CB sing N N 249 SER CA HA sing N N 250 SER C O doub N N 251 SER C OXT sing N N 252 SER CB OG sing N N 253 SER CB HB2 sing N N 254 SER CB HB3 sing N N 255 SER OG HG sing N N 256 SER OXT HXT sing N N 257 TYR N CA sing N N 258 TYR N H sing N N 259 TYR N H2 sing N N 260 TYR CA C sing N N 261 TYR CA CB sing N N 262 TYR CA HA sing N N 263 TYR C O doub N N 264 TYR C OXT sing N N 265 TYR CB CG sing N N 266 TYR CB HB2 sing N N 267 TYR CB HB3 sing N N 268 TYR CG CD1 doub Y N 269 TYR CG CD2 sing Y N 270 TYR CD1 CE1 sing Y N 271 TYR CD1 HD1 sing N N 272 TYR CD2 CE2 doub Y N 273 TYR CD2 HD2 sing N N 274 TYR CE1 CZ doub Y N 275 TYR CE1 HE1 sing N N 276 TYR CE2 CZ sing Y N 277 TYR CE2 HE2 sing N N 278 TYR CZ OH sing N N 279 TYR OH HH sing N N 280 TYR OXT HXT sing N N 281 VAL N CA sing N N 282 VAL N H sing N N 283 VAL N H2 sing N N 284 VAL CA C sing N N 285 VAL CA CB sing N N 286 VAL CA HA sing N N 287 VAL C O doub N N 288 VAL C OXT sing N N 289 VAL CB CG1 sing N N 290 VAL CB CG2 sing N N 291 VAL CB HB sing N N 292 VAL CG1 HG11 sing N N 293 VAL CG1 HG12 sing N N 294 VAL CG1 HG13 sing N N 295 VAL CG2 HG21 sing N N 296 VAL CG2 HG22 sing N N 297 VAL CG2 HG23 sing N N 298 VAL OXT HXT sing N N 299 # _atom_sites.entry_id 2OO9 _atom_sites.fract_transf_matrix[1][1] 0.012191 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012191 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.017795 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O SE # loop_