HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 25-JAN-07 2OOI TITLE THE CRYSTAL STRUCTURE OF GENE PRODUCT SA0254 FROM STAPHYLOCOCOCCUS TITLE 2 AUREUS SUBSP. AUREUS N315 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SA0254 PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RESIDUES 73-234; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS SUBSP. AUREUS; SOURCE 3 ORGANISM_TAXID: 158879; SOURCE 4 STRAIN: N315; SOURCE 5 GENE: SA0254; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PDM68 KEYWDS STAPHYLOCOCOCCUS AUREUS, STRUCTURAL GENOMICS, PSI-2, MCSG, PROTEIN KEYWDS 2 STRUCTURE INITIATIVE, MIDWEST CENTER FOR STRUCTURAL GENOMICS, KEYWDS 3 UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR R.ZHANG,E.DUGGAN,M.GU,A.JOACHIMIAK,MIDWEST CENTER FOR STRUCTURAL AUTHOR 2 GENOMICS (MCSG) REVDAT 4 27-DEC-23 2OOI 1 REMARK REVDAT 3 13-JUL-11 2OOI 1 VERSN REVDAT 2 24-FEB-09 2OOI 1 VERSN REVDAT 1 27-FEB-07 2OOI 0 JRNL AUTH R.ZHANG,E.DUGGAN,M.GU,A.JOACHIMIAK JRNL TITL THE CRYSTAL STRUCTURE OF GENE PRODUCT SA0254 FROM JRNL TITL 2 STAPHYLOCOCOCCUS AUREUS SUBSP. AUREUS N315 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.17 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 19380 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.226 REMARK 3 R VALUE (WORKING SET) : 0.224 REMARK 3 FREE R VALUE : 0.270 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1038 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.67 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1422 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.61 REMARK 3 BIN R VALUE (WORKING SET) : 0.3360 REMARK 3 BIN FREE R VALUE SET COUNT : 67 REMARK 3 BIN FREE R VALUE : 0.3810 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2592 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 49 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 50.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 50.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.08000 REMARK 3 B22 (A**2) : -0.08000 REMARK 3 B33 (A**2) : 0.12000 REMARK 3 B12 (A**2) : -0.04000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.332 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.267 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.203 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 19.317 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.938 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.906 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2704 ; 0.016 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1853 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3647 ; 1.798 ; 1.955 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4500 ; 1.074 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 318 ; 8.427 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 136 ;35.737 ;23.897 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 480 ;20.206 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 14 ;22.496 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 395 ; 0.116 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2971 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 587 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 580 ; 0.237 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1992 ; 0.205 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1246 ; 0.197 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 1542 ; 0.091 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 93 ; 0.204 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): 1 ; 0.166 ; 0.200 REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 12 ; 0.144 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 15 ; 0.195 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 2 ; 0.071 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2040 ; 1.011 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 642 ; 0.119 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2598 ; 1.203 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1310 ; 1.615 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1049 ; 2.411 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 8 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 73 A 91 REMARK 3 RESIDUE RANGE : A 92 A 140 REMARK 3 RESIDUE RANGE : A 141 A 180 REMARK 3 RESIDUE RANGE : A 181 A 233 REMARK 3 RESIDUE RANGE : B 73 B 91 REMARK 3 RESIDUE RANGE : B 92 B 140 REMARK 3 RESIDUE RANGE : B 141 B 180 REMARK 3 RESIDUE RANGE : B 181 B 233 REMARK 3 ORIGIN FOR THE GROUP (A): 19.8110 44.7440 57.4010 REMARK 3 T TENSOR REMARK 3 T11: 0.1201 T22: 0.1793 REMARK 3 T33: -0.0402 T12: 0.1106 REMARK 3 T13: -0.0090 T23: -0.0092 REMARK 3 L TENSOR REMARK 3 L11: 1.1385 L22: 0.2805 REMARK 3 L33: 3.2025 L12: -0.2523 REMARK 3 L13: 1.5851 L23: -0.7105 REMARK 3 S TENSOR REMARK 3 S11: 0.0830 S12: -0.1248 S13: -0.1777 REMARK 3 S21: 0.0195 S22: 0.0793 S23: 0.1004 REMARK 3 S31: 0.1184 S32: -0.2299 S33: -0.1623 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. THE N-TERMINAL OF MOL.A (RESIDUES 73-86) AND MOL.B REMARK 3 (RESIDUES 73-88) CAN NOT BE REFINED VERY WELL DUE TO THE LACK OF REMARK 3 THE DENSITY OF THE SIDECHAINS. REMARK 4 REMARK 4 2OOI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-JAN-07. REMARK 100 THE DEPOSITION ID IS D_1000041390. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-AUG-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 10.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97940 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19380 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 14.50 REMARK 200 R MERGE (I) : 0.09300 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 28.5700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.67 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.6 REMARK 200 DATA REDUNDANCY IN SHELL : 10.70 REMARK 200 R MERGE FOR SHELL (I) : 0.56800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: HKL-3000 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 72.14 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.42 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2M AMMONIUM SULFATE, 0.1M CAPS, 0.2M REMARK 280 LITHIUM SULFATE, PH 10.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 43.09250 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 43.09250 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 43.09250 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THIS PROTEIN EXISTED AS DIMER. THE DEPOSITED COORDS. OF REMARK 300 MOLA AND MOLB REPRESENT THE DIMER IN THE ASYMMETRIC UNIT. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 2850 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14590 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -89.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU A 87 REMARK 465 GLY A 88 REMARK 465 GLU A 89 REMARK 465 HIS A 90 REMARK 465 LYS A 234 REMARK 465 GLU B 89 REMARK 465 HIS B 90 REMARK 465 ASP B 118 REMARK 465 LYS B 234 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 PHE B 78 CG CD1 CD2 CE1 CE2 CZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CD1 ILE A 154 O HOH A 59 1.50 REMARK 500 OD1 ASN A 116 OD1 ASP A 118 1.64 REMARK 500 NH2 ARG B 126 OE2 GLU B 138 1.87 REMARK 500 CB PHE A 78 O HOH A 60 2.10 REMARK 500 O PHE A 78 OG SER B 232 2.11 REMARK 500 OE2 GLU A 112 OG1 THR A 205 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 201 NE - CZ - NH1 ANGL. DEV. = 4.3 DEGREES REMARK 500 ARG B 201 NE - CZ - NH2 ANGL. DEV. = -3.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 79 99.80 18.58 REMARK 500 SER A 84 -30.82 -39.64 REMARK 500 LYS A 85 45.81 -105.49 REMARK 500 ASP A 131 49.85 35.67 REMARK 500 ASP A 132 -1.10 80.91 REMARK 500 LYS A 148 -44.11 76.31 REMARK 500 GLN A 192 64.79 30.01 REMARK 500 THR A 195 131.17 -35.73 REMARK 500 ARG B 74 130.27 -176.95 REMARK 500 PHE B 78 -9.00 -59.30 REMARK 500 LYS B 79 76.08 -160.25 REMARK 500 ASP B 132 -6.08 73.50 REMARK 500 LYS B 148 -51.12 79.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 PHE A 78 LYS A 79 131.53 REMARK 500 LYS A 79 THR A 80 135.96 REMARK 500 PHE B 78 LYS B 79 -88.98 REMARK 500 LYS B 79 THR B 80 -149.20 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 2 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC23081 RELATED DB: TARGETDB DBREF 2OOI A 73 234 UNP Q7A7U1 Q7A7U1_STAAN 73 234 DBREF 2OOI B 73 234 UNP Q7A7U1 Q7A7U1_STAAN 73 234 SEQRES 1 A 162 ASN ARG ILE ASN VAL PHE LYS THR ASN GLY PHE SER LYS SEQRES 2 A 162 SER LEU GLY GLU HIS ARG MET THR SER LYS VAL LEU VAL SEQRES 3 A 162 PHE LYS GLU MET ALA THR PRO PRO LYS SER VAL GLN ASP SEQRES 4 A 162 GLU LEU GLN LEU ASN ALA ASP ASP THR VAL TYR TYR LEU SEQRES 5 A 162 GLU ARG LEU ARG PHE VAL ASP ASP ASP VAL LEU CYS ILE SEQRES 6 A 162 GLU TYR SER TYR TYR HIS LYS GLU ILE VAL LYS TYR LEU SEQRES 7 A 162 ASN ASP ASP ILE ALA LYS GLY SER ILE PHE ASP TYR LEU SEQRES 8 A 162 GLU SER ASN MET LYS LEU ARG ILE GLY PHE SER ASP ILE SEQRES 9 A 162 PHE PHE ASN VAL ASP LYS LEU THR SER SER GLU ALA SER SEQRES 10 A 162 LEU LEU GLN LEU SER THR GLY GLU PRO CYS LEU ARG TYR SEQRES 11 A 162 HIS GLN THR PHE TYR THR MET THR GLY LYS PRO PHE ASP SEQRES 12 A 162 SER SER ASP ILE VAL PHE HIS TYR ARG HIS ALA GLN PHE SEQRES 13 A 162 TYR ILE PRO SER LYS LYS SEQRES 1 B 162 ASN ARG ILE ASN VAL PHE LYS THR ASN GLY PHE SER LYS SEQRES 2 B 162 SER LEU GLY GLU HIS ARG MET THR SER LYS VAL LEU VAL SEQRES 3 B 162 PHE LYS GLU MET ALA THR PRO PRO LYS SER VAL GLN ASP SEQRES 4 B 162 GLU LEU GLN LEU ASN ALA ASP ASP THR VAL TYR TYR LEU SEQRES 5 B 162 GLU ARG LEU ARG PHE VAL ASP ASP ASP VAL LEU CYS ILE SEQRES 6 B 162 GLU TYR SER TYR TYR HIS LYS GLU ILE VAL LYS TYR LEU SEQRES 7 B 162 ASN ASP ASP ILE ALA LYS GLY SER ILE PHE ASP TYR LEU SEQRES 8 B 162 GLU SER ASN MET LYS LEU ARG ILE GLY PHE SER ASP ILE SEQRES 9 B 162 PHE PHE ASN VAL ASP LYS LEU THR SER SER GLU ALA SER SEQRES 10 B 162 LEU LEU GLN LEU SER THR GLY GLU PRO CYS LEU ARG TYR SEQRES 11 B 162 HIS GLN THR PHE TYR THR MET THR GLY LYS PRO PHE ASP SEQRES 12 B 162 SER SER ASP ILE VAL PHE HIS TYR ARG HIS ALA GLN PHE SEQRES 13 B 162 TYR ILE PRO SER LYS LYS HET ZN A 1 1 HET ZN B 2 1 HETNAM ZN ZINC ION FORMUL 3 ZN 2(ZN 2+) FORMUL 5 HOH *49(H2 O) HELIX 1 1 GLY A 82 SER A 86 5 5 HELIX 2 2 PRO A 106 LEU A 113 1 8 HELIX 3 3 LYS A 144 LYS A 148 1 5 HELIX 4 4 ASN A 151 LYS A 156 1 6 HELIX 5 5 SER A 158 ASN A 166 1 9 HELIX 6 6 THR A 184 LEU A 191 1 8 HELIX 7 7 GLY B 82 LEU B 87 1 6 HELIX 8 8 PRO B 106 GLN B 114 1 9 HELIX 9 9 LYS B 144 LYS B 148 1 5 HELIX 10 10 ASP B 153 GLY B 157 5 5 HELIX 11 11 SER B 158 ASN B 166 1 9 HELIX 12 12 THR B 184 LEU B 191 1 8 SHEET 1 A 8 ILE A 75 ASN A 76 0 SHEET 2 A 8 GLN A 227 SER A 232 1 O GLN A 227 N ILE A 75 SHEET 3 A 8 ILE B 171 LYS B 182 -1 O ILE B 176 N ILE A 230 SHEET 4 A 8 PRO B 198 THR B 208 -1 O HIS B 203 N PHE B 177 SHEET 5 A 8 PRO B 213 HIS B 222 -1 O ILE B 219 N TYR B 202 SHEET 6 A 8 ASP B 133 HIS B 143 -1 N TYR B 139 O ASP B 218 SHEET 7 A 8 VAL B 121 VAL B 130 -1 N ARG B 128 O LEU B 135 SHEET 8 A 8 MET B 92 MET B 102 -1 N MET B 102 O VAL B 121 SHEET 1 B 8 MET A 92 MET A 102 0 SHEET 2 B 8 VAL A 121 VAL A 130 -1 O TYR A 123 N LYS A 100 SHEET 3 B 8 ASP A 133 HIS A 143 -1 O ASP A 133 N VAL A 130 SHEET 4 B 8 PRO A 213 HIS A 222 -1 O ASP A 218 N TYR A 139 SHEET 5 B 8 PRO A 198 THR A 208 -1 N TYR A 202 O ILE A 219 SHEET 6 B 8 ILE A 171 LYS A 182 -1 N PHE A 173 O TYR A 207 SHEET 7 B 8 PHE B 228 SER B 232 -1 O PHE B 228 N PHE A 178 SHEET 8 B 8 ILE B 75 ASN B 76 1 N ILE B 75 O TYR B 229 SITE 1 AC1 4 SER A 84 ARG A 126 ARG A 128 ILE A 159 SITE 1 AC2 4 ARG B 126 ARG B 128 ILE B 159 PHE B 160 CRYST1 116.104 116.104 86.185 90.00 90.00 120.00 P 63 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008613 0.004973 0.000000 0.00000 SCALE2 0.000000 0.009945 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011603 0.00000