data_2OOK # _entry.id 2OOK # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2OOK pdb_00002ook 10.2210/pdb2ook/pdb RCSB RCSB041392 ? ? WWPDB D_1000041392 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 372476 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 2OOK _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2007-01-25 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title ;Open and closed conformations of two SpoIIAA-like proteins (YP_749275.1 and YP_001095227.1) provide insights into membrane association and ligand binding. ; _citation.journal_abbrev 'Acta Crystallogr.,Sect.F' _citation.journal_volume 66 _citation.page_first 1245 _citation.page_last 1253 _citation.year 2010 _citation.journal_id_ASTM ? _citation.country DK _citation.journal_id_ISSN 1744-3091 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20944218 _citation.pdbx_database_id_DOI 10.1107/S1744309109042481 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kumar, A.' 1 ? primary 'Lomize, A.' 2 ? primary 'Jin, K.K.' 3 ? primary 'Carlton, D.' 4 ? primary 'Miller, M.D.' 5 ? primary 'Jaroszewski, L.' 6 ? primary 'Abdubek, P.' 7 ? primary 'Astakhova, T.' 8 ? primary 'Axelrod, H.L.' 9 ? primary 'Chiu, H.J.' 10 ? primary 'Clayton, T.' 11 ? primary 'Das, D.' 12 ? primary 'Deller, M.C.' 13 ? primary 'Duan, L.' 14 ? primary 'Feuerhelm, J.' 15 ? primary 'Grant, J.C.' 16 ? primary 'Grzechnik, A.' 17 ? primary 'Han, G.W.' 18 ? primary 'Klock, H.E.' 19 ? primary 'Knuth, M.W.' 20 ? primary 'Kozbial, P.' 21 ? primary 'Krishna, S.S.' 22 ? primary 'Marciano, D.' 23 ? primary 'McMullan, D.' 24 ? primary 'Morse, A.T.' 25 ? primary 'Nigoghossian, E.' 26 ? primary 'Okach, L.' 27 ? primary 'Reyes, R.' 28 ? primary 'Rife, C.L.' 29 ? primary 'Sefcovic, N.' 30 ? primary 'Tien, H.J.' 31 ? primary 'Trame, C.B.' 32 ? primary 'van den Bedem, H.' 33 ? primary 'Weekes, D.' 34 ? primary 'Xu, Q.' 35 ? primary 'Hodgson, K.O.' 36 ? primary 'Wooley, J.' 37 ? primary 'Elsliger, M.A.' 38 ? primary 'Deacon, A.M.' 39 ? primary 'Godzik, A.' 40 ? primary 'Lesley, S.A.' 41 ? primary 'Wilson, I.A.' 42 ? # _cell.entry_id 2OOK _cell.length_a 80.579 _cell.length_b 40.412 _cell.length_c 78.050 _cell.angle_alpha 90.000 _cell.angle_beta 92.230 _cell.angle_gamma 90.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2OOK _symmetry.Int_Tables_number 5 _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Hypothetical protein' 14718.325 2 ? ? ? ? 2 non-polymer syn 1,2-ETHANEDIOL 62.068 6 ? ? ? ? 3 water nat water 18.015 224 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;G(MSE)D(MSE)KKHGLSIGINRIESVFFVTLKAIGTLTHEDYLVITP(MSE)LEGALSQVDQPKVSLFLDATELDGWDL RAAWDDLKLGLKHKSEFERVAILGNKDWQEWAAKIGSWFIAGEIKYFEDEDDALKWLRY ; _entity_poly.pdbx_seq_one_letter_code_can ;GMDMKKHGLSIGINRIESVFFVTLKAIGTLTHEDYLVITPMLEGALSQVDQPKVSLFLDATELDGWDLRAAWDDLKLGLK HKSEFERVAILGNKDWQEWAAKIGSWFIAGEIKYFEDEDDALKWLRY ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier 372476 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 MSE n 1 3 ASP n 1 4 MSE n 1 5 LYS n 1 6 LYS n 1 7 HIS n 1 8 GLY n 1 9 LEU n 1 10 SER n 1 11 ILE n 1 12 GLY n 1 13 ILE n 1 14 ASN n 1 15 ARG n 1 16 ILE n 1 17 GLU n 1 18 SER n 1 19 VAL n 1 20 PHE n 1 21 PHE n 1 22 VAL n 1 23 THR n 1 24 LEU n 1 25 LYS n 1 26 ALA n 1 27 ILE n 1 28 GLY n 1 29 THR n 1 30 LEU n 1 31 THR n 1 32 HIS n 1 33 GLU n 1 34 ASP n 1 35 TYR n 1 36 LEU n 1 37 VAL n 1 38 ILE n 1 39 THR n 1 40 PRO n 1 41 MSE n 1 42 LEU n 1 43 GLU n 1 44 GLY n 1 45 ALA n 1 46 LEU n 1 47 SER n 1 48 GLN n 1 49 VAL n 1 50 ASP n 1 51 GLN n 1 52 PRO n 1 53 LYS n 1 54 VAL n 1 55 SER n 1 56 LEU n 1 57 PHE n 1 58 LEU n 1 59 ASP n 1 60 ALA n 1 61 THR n 1 62 GLU n 1 63 LEU n 1 64 ASP n 1 65 GLY n 1 66 TRP n 1 67 ASP n 1 68 LEU n 1 69 ARG n 1 70 ALA n 1 71 ALA n 1 72 TRP n 1 73 ASP n 1 74 ASP n 1 75 LEU n 1 76 LYS n 1 77 LEU n 1 78 GLY n 1 79 LEU n 1 80 LYS n 1 81 HIS n 1 82 LYS n 1 83 SER n 1 84 GLU n 1 85 PHE n 1 86 GLU n 1 87 ARG n 1 88 VAL n 1 89 ALA n 1 90 ILE n 1 91 LEU n 1 92 GLY n 1 93 ASN n 1 94 LYS n 1 95 ASP n 1 96 TRP n 1 97 GLN n 1 98 GLU n 1 99 TRP n 1 100 ALA n 1 101 ALA n 1 102 LYS n 1 103 ILE n 1 104 GLY n 1 105 SER n 1 106 TRP n 1 107 PHE n 1 108 ILE n 1 109 ALA n 1 110 GLY n 1 111 GLU n 1 112 ILE n 1 113 LYS n 1 114 TYR n 1 115 PHE n 1 116 GLU n 1 117 ASP n 1 118 GLU n 1 119 ASP n 1 120 ASP n 1 121 ALA n 1 122 LEU n 1 123 LYS n 1 124 TRP n 1 125 LEU n 1 126 ARG n 1 127 TYR n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Shewanella _entity_src_gen.pdbx_gene_src_gene 'YP_749275.1, Sfri_0576' _entity_src_gen.gene_src_species 'Shewanella frigidimarina' _entity_src_gen.gene_src_strain 'NCIMB 400' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Shewanella frigidimarina' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 318167 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain HK100 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name speedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q087X8_SHEFN _struct_ref.pdbx_db_accession Q087X8 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MDMKKHGLSIGINRIESVFFVTLKAIGTLTHEDYLVITPMLEGALSQVDQPKVSLFLDATELDGWDLRAAWDDLKLGLKH KSEFERVAILGNKDWQEWAAKIGSWFIAGEIKYFEDEDDALKWLRY ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2OOK A 2 ? 127 ? Q087X8 1 ? 126 ? 1 126 2 1 2OOK B 2 ? 127 ? Q087X8 1 ? 126 ? 1 126 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2OOK GLY A 1 ? UNP Q087X8 ? ? 'expression tag' 0 1 1 2OOK MSE A 2 ? UNP Q087X8 MET 1 'modified residue' 1 2 1 2OOK MSE A 4 ? UNP Q087X8 MET 3 'modified residue' 3 3 1 2OOK MSE A 41 ? UNP Q087X8 MET 40 'modified residue' 40 4 2 2OOK GLY B 1 ? UNP Q087X8 ? ? 'expression tag' 0 5 2 2OOK MSE B 2 ? UNP Q087X8 MET 1 'modified residue' 1 6 2 2OOK MSE B 4 ? UNP Q087X8 MET 3 'modified residue' 3 7 2 2OOK MSE B 41 ? UNP Q087X8 MET 40 'modified residue' 40 8 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 2OOK # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.16 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 42.97 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 7.3 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details 'NANODROP, 0.2M Calcium acetate, 20.0% PEG-3350, No Buffer, pH 7.3, VAPOR DIFFUSION, SITTING DROP, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.details 'Flat mirror (vertical focusing)' _diffrn_detector.pdbx_collection_date 2007-01-07 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Single crystal Si(111) bent (horizontal focusing)' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.91837 1.0 2 0.97910 1.0 3 0.97879 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL11-1 _diffrn_source.type 'SSRL BEAMLINE BL11-1' _diffrn_source.pdbx_wavelength_list '0.91837, 0.97910, 0.97879' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.entry_id 2OOK _reflns.d_resolution_high 1.800 _reflns.d_resolution_low 28.571 _reflns.number_obs 22625 _reflns.pdbx_Rmerge_I_obs 0.056 _reflns.pdbx_netI_over_sigmaI 13.6 _reflns.pdbx_Rsym_value 0.056 _reflns.pdbx_redundancy 3.800 _reflns.percent_possible_obs 96.500 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.B_iso_Wilson_estimate 24.85 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.80 1.85 ? 6294 ? 0.653 2.1 0.653 ? 3.80 ? 1640 95.30 1 1 1.85 1.90 ? 6128 ? 0.514 1.5 0.514 ? 3.80 ? 1597 95.50 2 1 1.90 1.95 ? 5975 ? 0.407 1.9 0.407 ? 3.80 ? 1570 96.00 3 1 1.95 2.01 ? 5762 ? 0.294 2.6 0.294 ? 3.80 ? 1507 95.70 4 1 2.01 2.08 ? 5674 ? 0.226 3.3 0.226 ? 3.80 ? 1487 96.30 5 1 2.08 2.15 ? 5509 ? 0.184 4.2 0.184 ? 3.80 ? 1436 96.20 6 1 2.15 2.23 ? 5297 ? 0.146 5.3 0.146 ? 3.80 ? 1379 96.20 7 1 2.23 2.32 ? 5006 ? 0.126 5.9 0.126 ? 3.80 ? 1315 96.50 8 1 2.32 2.43 ? 4939 ? 0.105 7.1 0.105 ? 3.80 ? 1292 96.80 9 1 2.43 2.55 ? 4697 ? 0.092 8.0 0.092 ? 3.80 ? 1232 96.60 10 1 2.55 2.68 ? 4522 ? 0.075 9.2 0.075 ? 3.80 ? 1188 96.90 11 1 2.68 2.85 ? 4219 ? 0.063 11.3 0.063 ? 3.80 ? 1104 97.10 12 1 2.85 3.04 ? 4007 ? 0.051 13.6 0.051 ? 3.80 ? 1054 97.50 13 1 3.04 3.29 ? 3732 ? 0.038 17.0 0.038 ? 3.80 ? 984 97.10 14 1 3.29 3.60 ? 3375 ? 0.035 17.3 0.035 ? 3.80 ? 891 97.50 15 1 3.60 4.02 ? 3155 ? 0.031 20.4 0.031 ? 3.80 ? 839 97.60 16 1 4.02 4.65 ? 2686 ? 0.028 22.9 0.028 ? 3.70 ? 722 97.90 17 1 4.65 5.69 ? 2340 ? 0.03 19.8 0.03 ? 3.70 ? 632 98.00 18 1 5.69 8.05 ? 1771 ? 0.035 18.4 0.035 ? 3.60 ? 492 98.40 19 1 8.05 28.57 ? 908 ? 0.029 23.0 0.029 ? 3.40 ? 264 93.50 20 1 # _refine.entry_id 2OOK _refine.ls_d_res_high 1.800 _refine.ls_d_res_low 28.571 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 96.020 _refine.ls_number_reflns_obs 22625 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 3. RESIDUES 1 IN CHAIN A AND 1-2, 80-81 IN CHAIN B ARE DISORDERED AND NOT INCLUDED IN THE MODEL. 4. EDO MOLECULES FROM THE CRYO SOLUTION ARE MODELED. 5. ATOM RECORDS CONTAIN RESIDUAL B FACTORS ONLY. ; _refine.ls_R_factor_all 0.186 _refine.ls_R_factor_R_work 0.183 _refine.ls_R_factor_R_free 0.233 _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 1162 _refine.B_iso_mean 29.171 _refine.aniso_B[1][1] -2.160 _refine.aniso_B[2][2] 2.580 _refine.aniso_B[3][3] -0.510 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] -1.200 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.964 _refine.correlation_coeff_Fo_to_Fc_free 0.939 _refine.pdbx_overall_ESU_R 0.146 _refine.pdbx_overall_ESU_R_Free 0.141 _refine.overall_SU_ML 0.106 _refine.overall_SU_B 6.712 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_obs 0.186 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1963 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 24 _refine_hist.number_atoms_solvent 224 _refine_hist.number_atoms_total 2211 _refine_hist.d_res_high 1.800 _refine_hist.d_res_low 28.571 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 2104 0.012 0.022 ? 'X-RAY DIFFRACTION' ? r_bond_other_d 1412 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2860 1.526 1.953 ? 'X-RAY DIFFRACTION' ? r_angle_other_deg 3460 0.899 3.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 267 4.704 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 93 32.917 24.946 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 365 11.623 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 6 13.645 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 318 0.086 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 2323 0.005 0.020 ? 'X-RAY DIFFRACTION' ? r_gen_planes_other 431 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 381 0.209 0.200 ? 'X-RAY DIFFRACTION' ? r_nbd_other 1410 0.199 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 975 0.184 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_other 1093 0.086 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 192 0.178 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 14 0.249 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 40 0.314 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 14 0.176 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1367 2.073 3.000 ? 'X-RAY DIFFRACTION' ? r_mcbond_other 518 0.524 3.000 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 2020 2.832 5.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 972 4.445 8.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 828 5.680 11.000 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.800 _refine_ls_shell.d_res_low 1.847 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 94.910 _refine_ls_shell.number_reflns_R_work 1567 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.243 _refine_ls_shell.R_factor_R_free 0.306 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 74 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs 1641 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2OOK _struct.title 'Crystal structure of a protein with unknown function (YP_749275.1) from Shewanella Frigidimarina NCIMB 400 at 1.80 A resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text ;YP_749275.1, hypothetical protein, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2, UNKNOWN FUNCTION ; _struct_keywords.pdbx_keywords 'STRUCTURAL GENOMICS, UNKNOWN FUNCTION' _struct_keywords.entry_id 2OOK # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 2 ? H N N 2 ? I N N 3 ? J N N 3 ? # _struct_biol.id 1 _struct_biol.details ;SIZE EXCLUSION CHROMATOGRAPHY WITH STATIC LIGHT SCATTERING SUPPORTS THE ASSIGNMENT OF A DIMER AS THE SIGNIFICANT OLIGOMERIZATION STATE. ; _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 31 ? SER A 47 ? THR A 30 SER A 46 1 ? 17 HELX_P HELX_P2 2 ALA A 70 ? LEU A 75 ? ALA A 69 LEU A 74 5 ? 6 HELX_P HELX_P3 3 LYS A 102 ? PHE A 107 ? LYS A 101 PHE A 106 5 ? 6 HELX_P HELX_P4 4 ASP A 117 ? TYR A 127 ? ASP A 116 TYR A 126 1 ? 11 HELX_P HELX_P5 5 THR B 31 ? SER B 47 ? THR B 30 SER B 46 1 ? 17 HELX_P HELX_P6 6 ALA B 70 ? LEU B 75 ? ALA B 69 LEU B 74 5 ? 6 HELX_P HELX_P7 7 TRP B 99 ? SER B 105 ? TRP B 98 SER B 104 1 ? 7 HELX_P HELX_P8 8 ASP B 117 ? TYR B 127 ? ASP B 116 TYR B 126 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A ASP 3 C ? ? ? 1_555 A MSE 4 N ? ? A ASP 2 A MSE 3 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale2 covale both ? A MSE 4 C ? ? ? 1_555 A LYS 5 N ? ? A MSE 3 A LYS 4 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale3 covale both ? A PRO 40 C ? ? ? 1_555 A MSE 41 N ? ? A PRO 39 A MSE 40 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale4 covale both ? A MSE 41 C ? ? ? 1_555 A LEU 42 N ? ? A MSE 40 A LEU 41 1_555 ? ? ? ? ? ? ? 1.338 ? ? covale5 covale both ? B MSE 4 C ? ? ? 1_555 B LYS 5 N ? ? B MSE 3 B LYS 4 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale6 covale both ? B PRO 40 C ? ? ? 1_555 B MSE 41 N ? ? B PRO 39 B MSE 40 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale7 covale both ? B MSE 41 C ? ? ? 1_555 B LEU 42 N ? ? B MSE 40 B LEU 41 1_555 ? ? ? ? ? ? ? 1.329 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 8 ? B ? 10 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? parallel B 1 2 ? parallel B 2 3 ? parallel B 3 4 ? parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel B 6 7 ? anti-parallel B 7 8 ? parallel B 8 9 ? parallel B 9 10 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ALA A 109 ? PHE A 115 ? ALA A 108 PHE A 114 A 2 PHE A 85 ? LEU A 91 ? PHE A 84 LEU A 90 A 3 LEU A 56 ? TRP A 66 ? LEU A 55 TRP A 65 A 4 VAL A 19 ? LEU A 30 ? VAL A 18 LEU A 29 A 5 LYS A 6 ? ILE A 16 ? LYS A 5 ILE A 15 A 6 LYS B 6 ? ILE B 16 ? LYS B 5 ILE B 15 A 7 VAL B 19 ? LEU B 30 ? VAL B 18 LEU B 29 A 8 LEU B 63 ? TRP B 66 ? LEU B 62 TRP B 65 B 1 ALA A 109 ? PHE A 115 ? ALA A 108 PHE A 114 B 2 PHE A 85 ? LEU A 91 ? PHE A 84 LEU A 90 B 3 LEU A 56 ? TRP A 66 ? LEU A 55 TRP A 65 B 4 VAL A 19 ? LEU A 30 ? VAL A 18 LEU A 29 B 5 LYS A 6 ? ILE A 16 ? LYS A 5 ILE A 15 B 6 LYS B 6 ? ILE B 16 ? LYS B 5 ILE B 15 B 7 VAL B 19 ? LEU B 30 ? VAL B 18 LEU B 29 B 8 LEU B 56 ? ASP B 59 ? LEU B 55 ASP B 58 B 9 PHE B 85 ? LEU B 91 ? PHE B 84 LEU B 90 B 10 ALA B 109 ? PHE B 115 ? ALA B 108 PHE B 114 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O PHE A 115 ? O PHE A 114 N ILE A 90 ? N ILE A 89 A 2 3 O ALA A 89 ? O ALA A 88 N LEU A 58 ? N LEU A 57 A 3 4 O ASP A 59 ? O ASP A 58 N LEU A 24 ? N LEU A 23 A 4 5 O ILE A 27 ? O ILE A 26 N GLY A 8 ? N GLY A 7 A 5 6 N ILE A 11 ? N ILE A 10 O ILE B 11 ? O ILE B 10 A 6 7 N ASN B 14 ? N ASN B 13 O PHE B 21 ? O PHE B 20 A 7 8 N LEU B 30 ? N LEU B 29 O GLY B 65 ? O GLY B 64 B 1 2 O PHE A 115 ? O PHE A 114 N ILE A 90 ? N ILE A 89 B 2 3 O ALA A 89 ? O ALA A 88 N LEU A 58 ? N LEU A 57 B 3 4 O ASP A 59 ? O ASP A 58 N LEU A 24 ? N LEU A 23 B 4 5 O ILE A 27 ? O ILE A 26 N GLY A 8 ? N GLY A 7 B 5 6 N ILE A 11 ? N ILE A 10 O ILE B 11 ? O ILE B 10 B 6 7 N ASN B 14 ? N ASN B 13 O PHE B 21 ? O PHE B 20 B 7 8 N LEU B 24 ? N LEU B 23 O ASP B 59 ? O ASP B 58 B 8 9 N LEU B 58 ? N LEU B 57 O ALA B 89 ? O ALA B 88 B 9 10 N ILE B 90 ? N ILE B 89 O PHE B 115 ? O PHE B 114 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A EDO 127 ? 7 'BINDING SITE FOR RESIDUE EDO A 127' AC2 Software A EDO 128 ? 6 'BINDING SITE FOR RESIDUE EDO A 128' AC3 Software A EDO 129 ? 5 'BINDING SITE FOR RESIDUE EDO A 129' AC4 Software B EDO 127 ? 9 'BINDING SITE FOR RESIDUE EDO B 127' AC5 Software A EDO 130 ? 5 'BINDING SITE FOR RESIDUE EDO A 130' AC6 Software B EDO 128 ? 6 'BINDING SITE FOR RESIDUE EDO B 128' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 7 SER A 10 ? SER A 9 . ? 1_555 ? 2 AC1 7 THR A 23 ? THR A 22 . ? 1_555 ? 3 AC1 7 LYS A 25 ? LYS A 24 . ? 1_555 ? 4 AC1 7 HOH I . ? HOH A 197 . ? 1_555 ? 5 AC1 7 HOH I . ? HOH A 219 . ? 1_555 ? 6 AC1 7 SER B 10 ? SER B 9 . ? 1_555 ? 7 AC1 7 EDO G . ? EDO B 127 . ? 1_555 ? 8 AC2 6 LEU A 9 ? LEU A 8 . ? 1_555 ? 9 AC2 6 SER A 10 ? SER A 9 . ? 1_555 ? 10 AC2 6 LYS A 25 ? LYS A 24 . ? 1_555 ? 11 AC2 6 ILE A 27 ? ILE A 26 . ? 1_555 ? 12 AC2 6 HOH I . ? HOH A 209 . ? 1_555 ? 13 AC2 6 ASN B 14 ? ASN B 13 . ? 1_555 ? 14 AC3 5 LYS A 113 ? LYS A 112 . ? 1_555 ? 15 AC3 5 HOH I . ? HOH A 158 . ? 1_555 ? 16 AC3 5 HOH I . ? HOH A 207 . ? 1_555 ? 17 AC3 5 GLU B 98 ? GLU B 97 . ? 3_445 ? 18 AC3 5 LYS B 102 ? LYS B 101 . ? 3_445 ? 19 AC4 9 ASN A 14 ? ASN A 13 . ? 1_555 ? 20 AC4 9 EDO C . ? EDO A 127 . ? 1_555 ? 21 AC4 9 LYS B 6 ? LYS B 5 . ? 1_555 ? 22 AC4 9 LEU B 9 ? LEU B 8 . ? 1_555 ? 23 AC4 9 SER B 10 ? SER B 9 . ? 1_555 ? 24 AC4 9 LYS B 25 ? LYS B 24 . ? 1_555 ? 25 AC4 9 ILE B 27 ? ILE B 26 . ? 1_555 ? 26 AC4 9 HOH J . ? HOH B 175 . ? 1_555 ? 27 AC4 9 HOH J . ? HOH B 201 . ? 1_555 ? 28 AC5 5 GLY A 110 ? GLY A 109 . ? 1_555 ? 29 AC5 5 HOH I . ? HOH A 176 . ? 1_555 ? 30 AC5 5 LEU B 68 ? LEU B 67 . ? 3_445 ? 31 AC5 5 ASP B 73 ? ASP B 72 . ? 3_445 ? 32 AC5 5 HOH J . ? HOH B 216 . ? 3_445 ? 33 AC6 6 PRO A 40 ? PRO A 39 . ? 1_555 ? 34 AC6 6 LYS A 94 ? LYS A 93 . ? 1_565 ? 35 AC6 6 GLU A 116 ? GLU A 115 . ? 1_565 ? 36 AC6 6 GLN B 48 ? GLN B 47 . ? 1_555 ? 37 AC6 6 ASP B 95 ? ASP B 94 . ? 3_455 ? 38 AC6 6 HOH J . ? HOH B 178 . ? 1_555 ? # _atom_sites.entry_id 2OOK _atom_sites.fract_transf_matrix[1][1] 0.01241 _atom_sites.fract_transf_matrix[1][2] 0.00000 _atom_sites.fract_transf_matrix[1][3] 0.00048 _atom_sites.fract_transf_matrix[2][1] 0.00000 _atom_sites.fract_transf_matrix[2][2] 0.02475 _atom_sites.fract_transf_matrix[2][3] 0.00000 _atom_sites.fract_transf_matrix[3][1] 0.00000 _atom_sites.fract_transf_matrix[3][2] 0.00000 _atom_sites.fract_transf_matrix[3][3] 0.01282 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 MSE 2 1 ? ? ? A . n A 1 3 ASP 3 2 2 ASP ASP A . n A 1 4 MSE 4 3 3 MSE MSE A . n A 1 5 LYS 5 4 4 LYS LYS A . n A 1 6 LYS 6 5 5 LYS LYS A . n A 1 7 HIS 7 6 6 HIS HIS A . n A 1 8 GLY 8 7 7 GLY GLY A . n A 1 9 LEU 9 8 8 LEU LEU A . n A 1 10 SER 10 9 9 SER SER A . n A 1 11 ILE 11 10 10 ILE ILE A . n A 1 12 GLY 12 11 11 GLY GLY A . n A 1 13 ILE 13 12 12 ILE ILE A . n A 1 14 ASN 14 13 13 ASN ASN A . n A 1 15 ARG 15 14 14 ARG ARG A . n A 1 16 ILE 16 15 15 ILE ILE A . n A 1 17 GLU 17 16 16 GLU GLU A . n A 1 18 SER 18 17 17 SER SER A . n A 1 19 VAL 19 18 18 VAL VAL A . n A 1 20 PHE 20 19 19 PHE PHE A . n A 1 21 PHE 21 20 20 PHE PHE A . n A 1 22 VAL 22 21 21 VAL VAL A . n A 1 23 THR 23 22 22 THR THR A . n A 1 24 LEU 24 23 23 LEU LEU A . n A 1 25 LYS 25 24 24 LYS LYS A . n A 1 26 ALA 26 25 25 ALA ALA A . n A 1 27 ILE 27 26 26 ILE ILE A . n A 1 28 GLY 28 27 27 GLY GLY A . n A 1 29 THR 29 28 28 THR THR A . n A 1 30 LEU 30 29 29 LEU LEU A . n A 1 31 THR 31 30 30 THR THR A . n A 1 32 HIS 32 31 31 HIS HIS A . n A 1 33 GLU 33 32 32 GLU GLU A . n A 1 34 ASP 34 33 33 ASP ASP A . n A 1 35 TYR 35 34 34 TYR TYR A . n A 1 36 LEU 36 35 35 LEU LEU A . n A 1 37 VAL 37 36 36 VAL VAL A . n A 1 38 ILE 38 37 37 ILE ILE A . n A 1 39 THR 39 38 38 THR THR A . n A 1 40 PRO 40 39 39 PRO PRO A . n A 1 41 MSE 41 40 40 MSE MSE A . n A 1 42 LEU 42 41 41 LEU LEU A . n A 1 43 GLU 43 42 42 GLU GLU A . n A 1 44 GLY 44 43 43 GLY GLY A . n A 1 45 ALA 45 44 44 ALA ALA A . n A 1 46 LEU 46 45 45 LEU LEU A . n A 1 47 SER 47 46 46 SER SER A . n A 1 48 GLN 48 47 47 GLN GLN A . n A 1 49 VAL 49 48 48 VAL VAL A . n A 1 50 ASP 50 49 49 ASP ASP A . n A 1 51 GLN 51 50 50 GLN GLN A . n A 1 52 PRO 52 51 51 PRO PRO A . n A 1 53 LYS 53 52 52 LYS LYS A . n A 1 54 VAL 54 53 53 VAL VAL A . n A 1 55 SER 55 54 54 SER SER A . n A 1 56 LEU 56 55 55 LEU LEU A . n A 1 57 PHE 57 56 56 PHE PHE A . n A 1 58 LEU 58 57 57 LEU LEU A . n A 1 59 ASP 59 58 58 ASP ASP A . n A 1 60 ALA 60 59 59 ALA ALA A . n A 1 61 THR 61 60 60 THR THR A . n A 1 62 GLU 62 61 61 GLU GLU A . n A 1 63 LEU 63 62 62 LEU LEU A . n A 1 64 ASP 64 63 63 ASP ASP A . n A 1 65 GLY 65 64 64 GLY GLY A . n A 1 66 TRP 66 65 65 TRP TRP A . n A 1 67 ASP 67 66 66 ASP ASP A . n A 1 68 LEU 68 67 67 LEU LEU A . n A 1 69 ARG 69 68 68 ARG ARG A . n A 1 70 ALA 70 69 69 ALA ALA A . n A 1 71 ALA 71 70 70 ALA ALA A . n A 1 72 TRP 72 71 71 TRP TRP A . n A 1 73 ASP 73 72 72 ASP ASP A . n A 1 74 ASP 74 73 73 ASP ASP A . n A 1 75 LEU 75 74 74 LEU LEU A . n A 1 76 LYS 76 75 75 LYS LYS A . n A 1 77 LEU 77 76 76 LEU LEU A . n A 1 78 GLY 78 77 77 GLY GLY A . n A 1 79 LEU 79 78 78 LEU LEU A . n A 1 80 LYS 80 79 79 LYS LYS A . n A 1 81 HIS 81 80 80 HIS HIS A . n A 1 82 LYS 82 81 81 LYS LYS A . n A 1 83 SER 83 82 82 SER SER A . n A 1 84 GLU 84 83 83 GLU GLU A . n A 1 85 PHE 85 84 84 PHE PHE A . n A 1 86 GLU 86 85 85 GLU GLU A . n A 1 87 ARG 87 86 86 ARG ARG A . n A 1 88 VAL 88 87 87 VAL VAL A . n A 1 89 ALA 89 88 88 ALA ALA A . n A 1 90 ILE 90 89 89 ILE ILE A . n A 1 91 LEU 91 90 90 LEU LEU A . n A 1 92 GLY 92 91 91 GLY GLY A . n A 1 93 ASN 93 92 92 ASN ASN A . n A 1 94 LYS 94 93 93 LYS LYS A . n A 1 95 ASP 95 94 94 ASP ASP A . n A 1 96 TRP 96 95 95 TRP TRP A . n A 1 97 GLN 97 96 96 GLN GLN A . n A 1 98 GLU 98 97 97 GLU GLU A . n A 1 99 TRP 99 98 98 TRP TRP A . n A 1 100 ALA 100 99 99 ALA ALA A . n A 1 101 ALA 101 100 100 ALA ALA A . n A 1 102 LYS 102 101 101 LYS LYS A . n A 1 103 ILE 103 102 102 ILE ILE A . n A 1 104 GLY 104 103 103 GLY GLY A . n A 1 105 SER 105 104 104 SER SER A . n A 1 106 TRP 106 105 105 TRP TRP A . n A 1 107 PHE 107 106 106 PHE PHE A . n A 1 108 ILE 108 107 107 ILE ILE A . n A 1 109 ALA 109 108 108 ALA ALA A . n A 1 110 GLY 110 109 109 GLY GLY A . n A 1 111 GLU 111 110 110 GLU GLU A . n A 1 112 ILE 112 111 111 ILE ILE A . n A 1 113 LYS 113 112 112 LYS LYS A . n A 1 114 TYR 114 113 113 TYR TYR A . n A 1 115 PHE 115 114 114 PHE PHE A . n A 1 116 GLU 116 115 115 GLU GLU A . n A 1 117 ASP 117 116 116 ASP ASP A . n A 1 118 GLU 118 117 117 GLU GLU A . n A 1 119 ASP 119 118 118 ASP ASP A . n A 1 120 ASP 120 119 119 ASP ASP A . n A 1 121 ALA 121 120 120 ALA ALA A . n A 1 122 LEU 122 121 121 LEU LEU A . n A 1 123 LYS 123 122 122 LYS LYS A . n A 1 124 TRP 124 123 123 TRP TRP A . n A 1 125 LEU 125 124 124 LEU LEU A . n A 1 126 ARG 126 125 125 ARG ARG A . n A 1 127 TYR 127 126 126 TYR TYR A . n B 1 1 GLY 1 0 ? ? ? B . n B 1 2 MSE 2 1 ? ? ? B . n B 1 3 ASP 3 2 ? ? ? B . n B 1 4 MSE 4 3 3 MSE MSE B . n B 1 5 LYS 5 4 4 LYS LYS B . n B 1 6 LYS 6 5 5 LYS LYS B . n B 1 7 HIS 7 6 6 HIS HIS B . n B 1 8 GLY 8 7 7 GLY GLY B . n B 1 9 LEU 9 8 8 LEU LEU B . n B 1 10 SER 10 9 9 SER SER B . n B 1 11 ILE 11 10 10 ILE ILE B . n B 1 12 GLY 12 11 11 GLY GLY B . n B 1 13 ILE 13 12 12 ILE ILE B . n B 1 14 ASN 14 13 13 ASN ASN B . n B 1 15 ARG 15 14 14 ARG ARG B . n B 1 16 ILE 16 15 15 ILE ILE B . n B 1 17 GLU 17 16 16 GLU GLU B . n B 1 18 SER 18 17 17 SER SER B . n B 1 19 VAL 19 18 18 VAL VAL B . n B 1 20 PHE 20 19 19 PHE PHE B . n B 1 21 PHE 21 20 20 PHE PHE B . n B 1 22 VAL 22 21 21 VAL VAL B . n B 1 23 THR 23 22 22 THR THR B . n B 1 24 LEU 24 23 23 LEU LEU B . n B 1 25 LYS 25 24 24 LYS LYS B . n B 1 26 ALA 26 25 25 ALA ALA B . n B 1 27 ILE 27 26 26 ILE ILE B . n B 1 28 GLY 28 27 27 GLY GLY B . n B 1 29 THR 29 28 28 THR THR B . n B 1 30 LEU 30 29 29 LEU LEU B . n B 1 31 THR 31 30 30 THR THR B . n B 1 32 HIS 32 31 31 HIS HIS B . n B 1 33 GLU 33 32 32 GLU GLU B . n B 1 34 ASP 34 33 33 ASP ASP B . n B 1 35 TYR 35 34 34 TYR TYR B . n B 1 36 LEU 36 35 35 LEU LEU B . n B 1 37 VAL 37 36 36 VAL VAL B . n B 1 38 ILE 38 37 37 ILE ILE B . n B 1 39 THR 39 38 38 THR THR B . n B 1 40 PRO 40 39 39 PRO PRO B . n B 1 41 MSE 41 40 40 MSE MSE B . n B 1 42 LEU 42 41 41 LEU LEU B . n B 1 43 GLU 43 42 42 GLU GLU B . n B 1 44 GLY 44 43 43 GLY GLY B . n B 1 45 ALA 45 44 44 ALA ALA B . n B 1 46 LEU 46 45 45 LEU LEU B . n B 1 47 SER 47 46 46 SER SER B . n B 1 48 GLN 48 47 47 GLN GLN B . n B 1 49 VAL 49 48 48 VAL VAL B . n B 1 50 ASP 50 49 49 ASP ASP B . n B 1 51 GLN 51 50 50 GLN GLN B . n B 1 52 PRO 52 51 51 PRO PRO B . n B 1 53 LYS 53 52 52 LYS LYS B . n B 1 54 VAL 54 53 53 VAL VAL B . n B 1 55 SER 55 54 54 SER SER B . n B 1 56 LEU 56 55 55 LEU LEU B . n B 1 57 PHE 57 56 56 PHE PHE B . n B 1 58 LEU 58 57 57 LEU LEU B . n B 1 59 ASP 59 58 58 ASP ASP B . n B 1 60 ALA 60 59 59 ALA ALA B . n B 1 61 THR 61 60 60 THR THR B . n B 1 62 GLU 62 61 61 GLU GLU B . n B 1 63 LEU 63 62 62 LEU LEU B . n B 1 64 ASP 64 63 63 ASP ASP B . n B 1 65 GLY 65 64 64 GLY GLY B . n B 1 66 TRP 66 65 65 TRP TRP B . n B 1 67 ASP 67 66 66 ASP ASP B . n B 1 68 LEU 68 67 67 LEU LEU B . n B 1 69 ARG 69 68 68 ARG ARG B . n B 1 70 ALA 70 69 69 ALA ALA B . n B 1 71 ALA 71 70 70 ALA ALA B . n B 1 72 TRP 72 71 71 TRP TRP B . n B 1 73 ASP 73 72 72 ASP ASP B . n B 1 74 ASP 74 73 73 ASP ASP B . n B 1 75 LEU 75 74 74 LEU LEU B . n B 1 76 LYS 76 75 75 LYS LYS B . n B 1 77 LEU 77 76 76 LEU LEU B . n B 1 78 GLY 78 77 77 GLY GLY B . n B 1 79 LEU 79 78 78 LEU LEU B . n B 1 80 LYS 80 79 79 LYS LYS B . n B 1 81 HIS 81 80 ? ? ? B . n B 1 82 LYS 82 81 ? ? ? B . n B 1 83 SER 83 82 82 SER SER B . n B 1 84 GLU 84 83 83 GLU GLU B . n B 1 85 PHE 85 84 84 PHE PHE B . n B 1 86 GLU 86 85 85 GLU GLU B . n B 1 87 ARG 87 86 86 ARG ARG B . n B 1 88 VAL 88 87 87 VAL VAL B . n B 1 89 ALA 89 88 88 ALA ALA B . n B 1 90 ILE 90 89 89 ILE ILE B . n B 1 91 LEU 91 90 90 LEU LEU B . n B 1 92 GLY 92 91 91 GLY GLY B . n B 1 93 ASN 93 92 92 ASN ASN B . n B 1 94 LYS 94 93 93 LYS LYS B . n B 1 95 ASP 95 94 94 ASP ASP B . n B 1 96 TRP 96 95 95 TRP TRP B . n B 1 97 GLN 97 96 96 GLN GLN B . n B 1 98 GLU 98 97 97 GLU GLU B . n B 1 99 TRP 99 98 98 TRP TRP B . n B 1 100 ALA 100 99 99 ALA ALA B . n B 1 101 ALA 101 100 100 ALA ALA B . n B 1 102 LYS 102 101 101 LYS LYS B . n B 1 103 ILE 103 102 102 ILE ILE B . n B 1 104 GLY 104 103 103 GLY GLY B . n B 1 105 SER 105 104 104 SER SER B . n B 1 106 TRP 106 105 105 TRP TRP B . n B 1 107 PHE 107 106 106 PHE PHE B . n B 1 108 ILE 108 107 107 ILE ILE B . n B 1 109 ALA 109 108 108 ALA ALA B . n B 1 110 GLY 110 109 109 GLY GLY B . n B 1 111 GLU 111 110 110 GLU GLU B . n B 1 112 ILE 112 111 111 ILE ILE B . n B 1 113 LYS 113 112 112 LYS LYS B . n B 1 114 TYR 114 113 113 TYR TYR B . n B 1 115 PHE 115 114 114 PHE PHE B . n B 1 116 GLU 116 115 115 GLU GLU B . n B 1 117 ASP 117 116 116 ASP ASP B . n B 1 118 GLU 118 117 117 GLU GLU B . n B 1 119 ASP 119 118 118 ASP ASP B . n B 1 120 ASP 120 119 119 ASP ASP B . n B 1 121 ALA 121 120 120 ALA ALA B . n B 1 122 LEU 122 121 121 LEU LEU B . n B 1 123 LYS 123 122 122 LYS LYS B . n B 1 124 TRP 124 123 123 TRP TRP B . n B 1 125 LEU 125 124 124 LEU LEU B . n B 1 126 ARG 126 125 125 ARG ARG B . n B 1 127 TYR 127 126 126 TYR TYR B . n # _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 EDO 1 127 1 EDO EDO A . D 2 EDO 1 128 2 EDO EDO A . E 2 EDO 1 129 3 EDO EDO A . F 2 EDO 1 130 5 EDO EDO A . G 2 EDO 1 127 4 EDO EDO B . H 2 EDO 1 128 6 EDO EDO B . I 3 HOH 1 131 7 HOH HOH A . I 3 HOH 2 132 8 HOH HOH A . I 3 HOH 3 133 9 HOH HOH A . I 3 HOH 4 134 13 HOH HOH A . I 3 HOH 5 135 15 HOH HOH A . I 3 HOH 6 136 18 HOH HOH A . I 3 HOH 7 137 21 HOH HOH A . I 3 HOH 8 138 23 HOH HOH A . I 3 HOH 9 139 27 HOH HOH A . I 3 HOH 10 140 28 HOH HOH A . I 3 HOH 11 141 31 HOH HOH A . I 3 HOH 12 142 35 HOH HOH A . I 3 HOH 13 143 37 HOH HOH A . I 3 HOH 14 144 38 HOH HOH A . I 3 HOH 15 145 40 HOH HOH A . I 3 HOH 16 146 42 HOH HOH A . I 3 HOH 17 147 43 HOH HOH A . I 3 HOH 18 148 45 HOH HOH A . I 3 HOH 19 149 46 HOH HOH A . I 3 HOH 20 150 48 HOH HOH A . I 3 HOH 21 151 49 HOH HOH A . I 3 HOH 22 152 50 HOH HOH A . I 3 HOH 23 153 52 HOH HOH A . I 3 HOH 24 154 53 HOH HOH A . I 3 HOH 25 155 56 HOH HOH A . I 3 HOH 26 156 57 HOH HOH A . I 3 HOH 27 157 58 HOH HOH A . I 3 HOH 28 158 60 HOH HOH A . I 3 HOH 29 159 61 HOH HOH A . I 3 HOH 30 160 62 HOH HOH A . I 3 HOH 31 161 63 HOH HOH A . I 3 HOH 32 162 65 HOH HOH A . I 3 HOH 33 163 66 HOH HOH A . I 3 HOH 34 164 67 HOH HOH A . I 3 HOH 35 165 72 HOH HOH A . I 3 HOH 36 166 73 HOH HOH A . I 3 HOH 37 167 74 HOH HOH A . I 3 HOH 38 168 76 HOH HOH A . I 3 HOH 39 169 77 HOH HOH A . I 3 HOH 40 170 80 HOH HOH A . I 3 HOH 41 171 82 HOH HOH A . I 3 HOH 42 172 83 HOH HOH A . I 3 HOH 43 173 85 HOH HOH A . I 3 HOH 44 174 87 HOH HOH A . I 3 HOH 45 175 89 HOH HOH A . I 3 HOH 46 176 93 HOH HOH A . I 3 HOH 47 177 94 HOH HOH A . I 3 HOH 48 178 97 HOH HOH A . I 3 HOH 49 179 99 HOH HOH A . I 3 HOH 50 180 100 HOH HOH A . I 3 HOH 51 181 102 HOH HOH A . I 3 HOH 52 182 108 HOH HOH A . I 3 HOH 53 183 110 HOH HOH A . I 3 HOH 54 184 112 HOH HOH A . I 3 HOH 55 185 114 HOH HOH A . I 3 HOH 56 186 115 HOH HOH A . I 3 HOH 57 187 116 HOH HOH A . I 3 HOH 58 188 118 HOH HOH A . I 3 HOH 59 189 119 HOH HOH A . I 3 HOH 60 190 120 HOH HOH A . I 3 HOH 61 191 122 HOH HOH A . I 3 HOH 62 192 126 HOH HOH A . I 3 HOH 63 193 127 HOH HOH A . I 3 HOH 64 194 129 HOH HOH A . I 3 HOH 65 195 130 HOH HOH A . I 3 HOH 66 196 131 HOH HOH A . I 3 HOH 67 197 137 HOH HOH A . I 3 HOH 68 198 138 HOH HOH A . I 3 HOH 69 199 140 HOH HOH A . I 3 HOH 70 200 141 HOH HOH A . I 3 HOH 71 201 142 HOH HOH A . I 3 HOH 72 202 144 HOH HOH A . I 3 HOH 73 203 145 HOH HOH A . I 3 HOH 74 204 147 HOH HOH A . I 3 HOH 75 205 150 HOH HOH A . I 3 HOH 76 206 152 HOH HOH A . I 3 HOH 77 207 154 HOH HOH A . I 3 HOH 78 208 155 HOH HOH A . I 3 HOH 79 209 158 HOH HOH A . I 3 HOH 80 210 159 HOH HOH A . I 3 HOH 81 211 161 HOH HOH A . I 3 HOH 82 212 162 HOH HOH A . I 3 HOH 83 213 163 HOH HOH A . I 3 HOH 84 214 165 HOH HOH A . I 3 HOH 85 215 166 HOH HOH A . I 3 HOH 86 216 167 HOH HOH A . I 3 HOH 87 217 169 HOH HOH A . I 3 HOH 88 218 171 HOH HOH A . I 3 HOH 89 219 172 HOH HOH A . I 3 HOH 90 220 173 HOH HOH A . I 3 HOH 91 221 174 HOH HOH A . I 3 HOH 92 222 177 HOH HOH A . I 3 HOH 93 223 183 HOH HOH A . I 3 HOH 94 224 184 HOH HOH A . I 3 HOH 95 225 185 HOH HOH A . I 3 HOH 96 226 186 HOH HOH A . I 3 HOH 97 227 187 HOH HOH A . I 3 HOH 98 228 193 HOH HOH A . I 3 HOH 99 229 194 HOH HOH A . I 3 HOH 100 230 195 HOH HOH A . I 3 HOH 101 231 196 HOH HOH A . I 3 HOH 102 232 201 HOH HOH A . I 3 HOH 103 233 202 HOH HOH A . I 3 HOH 104 234 205 HOH HOH A . I 3 HOH 105 235 206 HOH HOH A . I 3 HOH 106 236 209 HOH HOH A . I 3 HOH 107 237 211 HOH HOH A . I 3 HOH 108 238 213 HOH HOH A . I 3 HOH 109 239 215 HOH HOH A . I 3 HOH 110 240 217 HOH HOH A . I 3 HOH 111 241 221 HOH HOH A . I 3 HOH 112 242 227 HOH HOH A . I 3 HOH 113 243 228 HOH HOH A . J 3 HOH 1 129 10 HOH HOH B . J 3 HOH 2 130 11 HOH HOH B . J 3 HOH 3 131 12 HOH HOH B . J 3 HOH 4 132 14 HOH HOH B . J 3 HOH 5 133 16 HOH HOH B . J 3 HOH 6 134 17 HOH HOH B . J 3 HOH 7 135 19 HOH HOH B . J 3 HOH 8 136 20 HOH HOH B . J 3 HOH 9 137 22 HOH HOH B . J 3 HOH 10 138 24 HOH HOH B . J 3 HOH 11 139 25 HOH HOH B . J 3 HOH 12 140 26 HOH HOH B . J 3 HOH 13 141 29 HOH HOH B . J 3 HOH 14 142 30 HOH HOH B . J 3 HOH 15 143 32 HOH HOH B . J 3 HOH 16 144 33 HOH HOH B . J 3 HOH 17 145 34 HOH HOH B . J 3 HOH 18 146 36 HOH HOH B . J 3 HOH 19 147 39 HOH HOH B . J 3 HOH 20 148 41 HOH HOH B . J 3 HOH 21 149 44 HOH HOH B . J 3 HOH 22 150 47 HOH HOH B . J 3 HOH 23 151 51 HOH HOH B . J 3 HOH 24 152 54 HOH HOH B . J 3 HOH 25 153 55 HOH HOH B . J 3 HOH 26 154 59 HOH HOH B . J 3 HOH 27 155 64 HOH HOH B . J 3 HOH 28 156 68 HOH HOH B . J 3 HOH 29 157 69 HOH HOH B . J 3 HOH 30 158 70 HOH HOH B . J 3 HOH 31 159 71 HOH HOH B . J 3 HOH 32 160 75 HOH HOH B . J 3 HOH 33 161 78 HOH HOH B . J 3 HOH 34 162 79 HOH HOH B . J 3 HOH 35 163 81 HOH HOH B . J 3 HOH 36 164 84 HOH HOH B . J 3 HOH 37 165 86 HOH HOH B . J 3 HOH 38 166 88 HOH HOH B . J 3 HOH 39 167 90 HOH HOH B . J 3 HOH 40 168 91 HOH HOH B . J 3 HOH 41 169 92 HOH HOH B . J 3 HOH 42 170 95 HOH HOH B . J 3 HOH 43 171 96 HOH HOH B . J 3 HOH 44 172 98 HOH HOH B . J 3 HOH 45 173 101 HOH HOH B . J 3 HOH 46 174 103 HOH HOH B . J 3 HOH 47 175 104 HOH HOH B . J 3 HOH 48 176 105 HOH HOH B . J 3 HOH 49 177 106 HOH HOH B . J 3 HOH 50 178 107 HOH HOH B . J 3 HOH 51 179 109 HOH HOH B . J 3 HOH 52 180 111 HOH HOH B . J 3 HOH 53 181 113 HOH HOH B . J 3 HOH 54 182 117 HOH HOH B . J 3 HOH 55 183 121 HOH HOH B . J 3 HOH 56 184 123 HOH HOH B . J 3 HOH 57 185 124 HOH HOH B . J 3 HOH 58 186 125 HOH HOH B . J 3 HOH 59 187 128 HOH HOH B . J 3 HOH 60 188 132 HOH HOH B . J 3 HOH 61 189 133 HOH HOH B . J 3 HOH 62 190 134 HOH HOH B . J 3 HOH 63 191 135 HOH HOH B . J 3 HOH 64 192 136 HOH HOH B . J 3 HOH 65 193 139 HOH HOH B . J 3 HOH 66 194 143 HOH HOH B . J 3 HOH 67 195 146 HOH HOH B . J 3 HOH 68 196 148 HOH HOH B . J 3 HOH 69 197 149 HOH HOH B . J 3 HOH 70 198 151 HOH HOH B . J 3 HOH 71 199 153 HOH HOH B . J 3 HOH 72 200 156 HOH HOH B . J 3 HOH 73 201 157 HOH HOH B . J 3 HOH 74 202 160 HOH HOH B . J 3 HOH 75 203 164 HOH HOH B . J 3 HOH 76 204 168 HOH HOH B . J 3 HOH 77 205 170 HOH HOH B . J 3 HOH 78 206 175 HOH HOH B . J 3 HOH 79 207 176 HOH HOH B . J 3 HOH 80 208 178 HOH HOH B . J 3 HOH 81 209 179 HOH HOH B . J 3 HOH 82 210 180 HOH HOH B . J 3 HOH 83 211 181 HOH HOH B . J 3 HOH 84 212 182 HOH HOH B . J 3 HOH 85 213 188 HOH HOH B . J 3 HOH 86 214 189 HOH HOH B . J 3 HOH 87 215 190 HOH HOH B . J 3 HOH 88 216 191 HOH HOH B . J 3 HOH 89 217 192 HOH HOH B . J 3 HOH 90 218 197 HOH HOH B . J 3 HOH 91 219 198 HOH HOH B . J 3 HOH 92 220 199 HOH HOH B . J 3 HOH 93 221 200 HOH HOH B . J 3 HOH 94 222 203 HOH HOH B . J 3 HOH 95 223 204 HOH HOH B . J 3 HOH 96 224 207 HOH HOH B . J 3 HOH 97 225 208 HOH HOH B . J 3 HOH 98 226 210 HOH HOH B . J 3 HOH 99 227 212 HOH HOH B . J 3 HOH 100 228 214 HOH HOH B . J 3 HOH 101 229 216 HOH HOH B . J 3 HOH 102 230 218 HOH HOH B . J 3 HOH 103 231 219 HOH HOH B . J 3 HOH 104 232 220 HOH HOH B . J 3 HOH 105 233 222 HOH HOH B . J 3 HOH 106 234 223 HOH HOH B . J 3 HOH 107 235 224 HOH HOH B . J 3 HOH 108 236 225 HOH HOH B . J 3 HOH 109 237 226 HOH HOH B . J 3 HOH 110 238 229 HOH HOH B . J 3 HOH 111 239 230 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 4 A MSE 3 ? MET SELENOMETHIONINE 2 A MSE 41 A MSE 40 ? MET SELENOMETHIONINE 3 B MSE 4 B MSE 3 ? MET SELENOMETHIONINE 4 B MSE 41 B MSE 40 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4110 ? 1 MORE -1 ? 1 'SSA (A^2)' 11400 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id B _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 239 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id J _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-02-06 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-18 5 'Structure model' 1 4 2017-10-25 6 'Structure model' 1 5 2023-01-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Source and taxonomy' 4 3 'Structure model' 'Version format compliance' 5 4 'Structure model' 'Refinement description' 6 5 'Structure model' 'Author supporting evidence' 7 6 'Structure model' 'Database references' 8 6 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' pdbx_struct_assembly_auth_evidence 3 6 'Structure model' database_2 4 6 'Structure model' struct_conn 5 6 'Structure model' struct_ref_seq_dif 6 6 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.classification' 2 4 'Structure model' '_software.name' 3 6 'Structure model' '_database_2.pdbx_DOI' 4 6 'Structure model' '_database_2.pdbx_database_accession' 5 6 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 6 6 'Structure model' '_struct_ref_seq_dif.details' 7 6 'Structure model' '_struct_site.pdbx_auth_asym_id' 8 6 'Structure model' '_struct_site.pdbx_auth_comp_id' 9 6 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.pdbx_refine_id 1 ? refined 14.9420 20.6510 17.9260 -0.1430 -0.2224 -0.1556 -0.0233 0.0113 0.0150 3.3434 1.9818 3.3031 1.5389 -0.0728 0.5879 0.0797 -0.0276 -0.0522 -0.0643 0.0660 0.0962 0.0612 -0.0599 -0.1041 'X-RAY DIFFRACTION' 2 ? refined 33.5380 29.3150 20.8880 -0.1119 -0.1938 -0.1572 -0.0423 0.0213 -0.0221 4.3945 1.1550 2.2870 1.4246 0.7787 -0.2384 0.1099 -0.0566 -0.0533 -0.1311 0.1426 -0.0272 0.1397 -0.0914 0.0210 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 A 3 A 127 ALL A 2 A 126 'X-RAY DIFFRACTION' ? 2 2 B 4 B 80 ALL B 3 B 79 'X-RAY DIFFRACTION' ? 3 2 B 83 B 127 ALL B 82 B 126 'X-RAY DIFFRACTION' ? # _phasing.method MAD # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 1 SHELX . ? package 'George Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 2 REFMAC 5.2.0019 ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran_77 ? 3 SCALA . ? other 'Phil Evans' pre@mrc-lmb.cam.ac.uk 'data scaling' http://www.ccp4.ac.uk/dist/html/INDEX.html Fortran_77 ? 4 PDB_EXTRACT 2.000 'April. 3, 2006' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 5 MAR345 CCD ? ? ? ? 'data collection' ? ? ? 6 MOSFLM . ? ? ? ? 'data reduction' ? ? ? 7 CCP4 '(SCALA)' ? ? ? ? 'data scaling' ? ? ? 8 SHELXD . ? ? ? ? phasing ? ? ? 9 autoSHARP . ? ? ? ? phasing ? ? ? 10 # loop_ _pdbx_database_remark.id _pdbx_database_remark.text 300 ; BIOMOLECULE: 1 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT WHICH CONSISTS OF 2 CHAINS. SEE REMARK 350 FOR INFORMATION ON GENERATING THE BIOLOGICAL MOLECULE(S). SIZE EXCLUSION CHROMATOGRAPHY WITH STATIC LIGHT SCATTERING SUPPORTS THE ASSIGNMENT OF A DIMER AS THE SIGNIFICANT OLIGOMERIZATION STATE. ; 999 ; SEQUENCE THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. ; # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CG _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 MSE _pdbx_validate_rmsd_angle.auth_seq_id_1 40 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 SE _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 MSE _pdbx_validate_rmsd_angle.auth_seq_id_2 40 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 CE _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 MSE _pdbx_validate_rmsd_angle.auth_seq_id_3 40 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 82.77 _pdbx_validate_rmsd_angle.angle_target_value 98.90 _pdbx_validate_rmsd_angle.angle_deviation -16.13 _pdbx_validate_rmsd_angle.angle_standard_deviation 2.20 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU B 16 ? ? 45.06 -106.04 2 1 TRP B 98 ? ? -141.60 -14.34 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 52 ? CD ? A LYS 53 CD 2 1 Y 1 A LYS 52 ? CE ? A LYS 53 CE 3 1 Y 1 A LYS 52 ? NZ ? A LYS 53 NZ 4 1 Y 1 A ARG 68 ? CD ? A ARG 69 CD 5 1 Y 1 A ARG 68 ? NE ? A ARG 69 NE 6 1 Y 1 A ARG 68 ? CZ ? A ARG 69 CZ 7 1 Y 1 A ARG 68 ? NH1 ? A ARG 69 NH1 8 1 Y 1 A ARG 68 ? NH2 ? A ARG 69 NH2 9 1 Y 1 A LYS 79 ? CG ? A LYS 80 CG 10 1 Y 1 A LYS 79 ? CD ? A LYS 80 CD 11 1 Y 1 A LYS 79 ? CE ? A LYS 80 CE 12 1 Y 1 A LYS 79 ? NZ ? A LYS 80 NZ 13 1 Y 1 A LYS 81 ? CD ? A LYS 82 CD 14 1 Y 1 A LYS 81 ? CE ? A LYS 82 CE 15 1 Y 1 A LYS 81 ? NZ ? A LYS 82 NZ 16 1 Y 1 A LYS 93 ? CD ? A LYS 94 CD 17 1 Y 1 A LYS 93 ? CE ? A LYS 94 CE 18 1 Y 1 A LYS 93 ? NZ ? A LYS 94 NZ 19 1 Y 1 A ASP 118 ? CG ? A ASP 119 CG 20 1 Y 1 A ASP 118 ? OD1 ? A ASP 119 OD1 21 1 Y 1 A ASP 118 ? OD2 ? A ASP 119 OD2 22 1 Y 1 B GLU 32 ? CD ? B GLU 33 CD 23 1 Y 1 B GLU 32 ? OE1 ? B GLU 33 OE1 24 1 Y 1 B GLU 32 ? OE2 ? B GLU 33 OE2 25 1 Y 1 B LYS 52 ? CD ? B LYS 53 CD 26 1 Y 1 B LYS 52 ? CE ? B LYS 53 CE 27 1 Y 1 B LYS 52 ? NZ ? B LYS 53 NZ 28 1 Y 1 B LYS 79 ? CD ? B LYS 80 CD 29 1 Y 1 B LYS 79 ? CE ? B LYS 80 CE 30 1 Y 1 B LYS 79 ? NZ ? B LYS 80 NZ 31 1 Y 1 B GLU 85 ? OE1 ? B GLU 86 OE1 32 1 Y 1 B GLU 85 ? OE2 ? B GLU 86 OE2 33 1 Y 1 B GLU 115 ? CD ? B GLU 116 CD 34 1 Y 1 B GLU 115 ? OE1 ? B GLU 116 OE1 35 1 Y 1 B GLU 115 ? OE2 ? B GLU 116 OE2 36 1 Y 1 B ARG 125 ? NE ? B ARG 126 NE 37 1 Y 1 B ARG 125 ? CZ ? B ARG 126 CZ 38 1 Y 1 B ARG 125 ? NH1 ? B ARG 126 NH1 39 1 Y 1 B ARG 125 ? NH2 ? B ARG 126 NH2 40 1 Y 1 B TYR 126 ? CG ? B TYR 127 CG 41 1 Y 1 B TYR 126 ? CD1 ? B TYR 127 CD1 42 1 Y 1 B TYR 126 ? CD2 ? B TYR 127 CD2 43 1 Y 1 B TYR 126 ? CE1 ? B TYR 127 CE1 44 1 Y 1 B TYR 126 ? CE2 ? B TYR 127 CE2 45 1 Y 1 B TYR 126 ? CZ ? B TYR 127 CZ 46 1 Y 1 B TYR 126 ? OH ? B TYR 127 OH # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 0 ? A GLY 1 2 1 Y 1 A MSE 1 ? A MSE 2 3 1 Y 1 B GLY 0 ? B GLY 1 4 1 Y 1 B MSE 1 ? B MSE 2 5 1 Y 1 B ASP 2 ? B ASP 3 6 1 Y 1 B HIS 80 ? B HIS 81 7 1 Y 1 B LYS 81 ? B LYS 82 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 1,2-ETHANEDIOL EDO 3 water HOH # loop_ _pdbx_struct_assembly_auth_evidence.id _pdbx_struct_assembly_auth_evidence.assembly_id _pdbx_struct_assembly_auth_evidence.experimental_support _pdbx_struct_assembly_auth_evidence.details 1 1 'gel filtration' ? 2 1 'light scattering' ? #