data_2OP4 # _entry.id 2OP4 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.377 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2OP4 pdb_00002op4 10.2210/pdb2op4/pdb RCSB RCSB041412 ? ? WWPDB D_1000041412 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 2NTF _pdbx_database_related.details 'Crystal Structure of Quorum-Quenching Antibody 1G9 in Complex with an N-Acyl-L-Homoserine Lactone Analog' _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2OP4 _pdbx_database_status.recvd_initial_deposition_date 2007-01-26 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Kirchdoerfer, R.N.' 1 'Debler, E.W.' 2 'Wilson, I.A.' 3 # _citation.id primary _citation.title 'Crystal Structures of a Quorum-quenching Antibody.' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 368 _citation.page_first 1392 _citation.page_last 1402 _citation.year 2007 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17400249 _citation.pdbx_database_id_DOI 10.1016/j.jmb.2007.02.081 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Debler, E.W.' 1 ? primary 'Kaufmann, G.F.' 2 ? primary 'Kirchdoerfer, R.N.' 3 ? primary 'Mee, J.M.' 4 ? primary 'Janda, K.D.' 5 ? primary 'Wilson, I.A.' 6 ? # _cell.entry_id 2OP4 _cell.length_a 56.925 _cell.length_b 72.041 _cell.length_c 116.143 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2OP4 _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'Murine Antibody Fab RS2-1G9 Lambda Light Chain' 22911.352 1 ? ? ? ? 2 polymer nat 'Murine Antibody Fab RS2-1G9 IGG1 Heavy Chain' 24082.904 1 ? ? ? ? 3 non-polymer syn 1,2-ETHANEDIOL 62.068 1 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;QAVVTQESALTTSPGETVTLTCRSSTGAVTTRNYANWVQEKPDHFFTGLIGDTNNRAPGVPARFSGSLIGHKAALTITGA QTEDESVYFCALWYSNHWVFGGGTKLTVLGQPKSSPSVTLFPPSSEELETNKATLVCTITDFYPGVVTVDWKVDGTPVTQ GMETTQPSKQSNNKYMASSYLTLTAGAWERHSSYSCQVTHEGHTVEKSLSRA ; ;QAVVTQESALTTSPGETVTLTCRSSTGAVTTRNYANWVQEKPDHFFTGLIGDTNNRAPGVPARFSGSLIGHKAALTITGA QTEDESVYFCALWYSNHWVFGGGTKLTVLGQPKSSPSVTLFPPSSEELETNKATLVCTITDFYPGVVTVDWKVDGTPVTQ GMETTQPSKQSNNKYMASSYLTLTAGAWERHSSYSCQVTHEGHTVEKSLSRA ; L ? 2 'polypeptide(L)' no no ;QVQLQQSGSELVRPGASVKLSCKASGYTFTTYWIHWVKQRPGQGLEWIGTIYPGSDNTYYDEKFKNKATLTVDTSSSTAF MQLSSLTSEDSAVYFCTRGSLYYNNYGWFGYWGQGTLVTVSAAKTTPPSVYPLAPGSNAASQSMVTLGCLVKGYFPEPVT VTWNSGSLSSGVHTFPAVLQSDLYTLTSSVTVPSSTWPSQTVTCNVAHPASSTKVDKKIVPR ; ;QVQLQQSGSELVRPGASVKLSCKASGYTFTTYWIHWVKQRPGQGLEWIGTIYPGSDNTYYDEKFKNKATLTVDTSSSTAF MQLSSLTSEDSAVYFCTRGSLYYNNYGWFGYWGQGTLVTVSAAKTTPPSVYPLAPGSNAASQSMVTLGCLVKGYFPEPVT VTWNSGSLSSGVHTFPAVLQSDLYTLTSSVTVPSSTWPSQTVTCNVAHPASSTKVDKKIVPR ; H ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLN n 1 2 ALA n 1 3 VAL n 1 4 VAL n 1 5 THR n 1 6 GLN n 1 7 GLU n 1 8 SER n 1 9 ALA n 1 10 LEU n 1 11 THR n 1 12 THR n 1 13 SER n 1 14 PRO n 1 15 GLY n 1 16 GLU n 1 17 THR n 1 18 VAL n 1 19 THR n 1 20 LEU n 1 21 THR n 1 22 CYS n 1 23 ARG n 1 24 SER n 1 25 SER n 1 26 THR n 1 27 GLY n 1 28 ALA n 1 29 VAL n 1 30 THR n 1 31 THR n 1 32 ARG n 1 33 ASN n 1 34 TYR n 1 35 ALA n 1 36 ASN n 1 37 TRP n 1 38 VAL n 1 39 GLN n 1 40 GLU n 1 41 LYS n 1 42 PRO n 1 43 ASP n 1 44 HIS n 1 45 PHE n 1 46 PHE n 1 47 THR n 1 48 GLY n 1 49 LEU n 1 50 ILE n 1 51 GLY n 1 52 ASP n 1 53 THR n 1 54 ASN n 1 55 ASN n 1 56 ARG n 1 57 ALA n 1 58 PRO n 1 59 GLY n 1 60 VAL n 1 61 PRO n 1 62 ALA n 1 63 ARG n 1 64 PHE n 1 65 SER n 1 66 GLY n 1 67 SER n 1 68 LEU n 1 69 ILE n 1 70 GLY n 1 71 HIS n 1 72 LYS n 1 73 ALA n 1 74 ALA n 1 75 LEU n 1 76 THR n 1 77 ILE n 1 78 THR n 1 79 GLY n 1 80 ALA n 1 81 GLN n 1 82 THR n 1 83 GLU n 1 84 ASP n 1 85 GLU n 1 86 SER n 1 87 VAL n 1 88 TYR n 1 89 PHE n 1 90 CYS n 1 91 ALA n 1 92 LEU n 1 93 TRP n 1 94 TYR n 1 95 SER n 1 96 ASN n 1 97 HIS n 1 98 TRP n 1 99 VAL n 1 100 PHE n 1 101 GLY n 1 102 GLY n 1 103 GLY n 1 104 THR n 1 105 LYS n 1 106 LEU n 1 107 THR n 1 108 VAL n 1 109 LEU n 1 110 GLY n 1 111 GLN n 1 112 PRO n 1 113 LYS n 1 114 SER n 1 115 SER n 1 116 PRO n 1 117 SER n 1 118 VAL n 1 119 THR n 1 120 LEU n 1 121 PHE n 1 122 PRO n 1 123 PRO n 1 124 SER n 1 125 SER n 1 126 GLU n 1 127 GLU n 1 128 LEU n 1 129 GLU n 1 130 THR n 1 131 ASN n 1 132 LYS n 1 133 ALA n 1 134 THR n 1 135 LEU n 1 136 VAL n 1 137 CYS n 1 138 THR n 1 139 ILE n 1 140 THR n 1 141 ASP n 1 142 PHE n 1 143 TYR n 1 144 PRO n 1 145 GLY n 1 146 VAL n 1 147 VAL n 1 148 THR n 1 149 VAL n 1 150 ASP n 1 151 TRP n 1 152 LYS n 1 153 VAL n 1 154 ASP n 1 155 GLY n 1 156 THR n 1 157 PRO n 1 158 VAL n 1 159 THR n 1 160 GLN n 1 161 GLY n 1 162 MET n 1 163 GLU n 1 164 THR n 1 165 THR n 1 166 GLN n 1 167 PRO n 1 168 SER n 1 169 LYS n 1 170 GLN n 1 171 SER n 1 172 ASN n 1 173 ASN n 1 174 LYS n 1 175 TYR n 1 176 MET n 1 177 ALA n 1 178 SER n 1 179 SER n 1 180 TYR n 1 181 LEU n 1 182 THR n 1 183 LEU n 1 184 THR n 1 185 ALA n 1 186 GLY n 1 187 ALA n 1 188 TRP n 1 189 GLU n 1 190 ARG n 1 191 HIS n 1 192 SER n 1 193 SER n 1 194 TYR n 1 195 SER n 1 196 CYS n 1 197 GLN n 1 198 VAL n 1 199 THR n 1 200 HIS n 1 201 GLU n 1 202 GLY n 1 203 HIS n 1 204 THR n 1 205 VAL n 1 206 GLU n 1 207 LYS n 1 208 SER n 1 209 LEU n 1 210 SER n 1 211 ARG n 1 212 ALA n 2 1 GLN n 2 2 VAL n 2 3 GLN n 2 4 LEU n 2 5 GLN n 2 6 GLN n 2 7 SER n 2 8 GLY n 2 9 SER n 2 10 GLU n 2 11 LEU n 2 12 VAL n 2 13 ARG n 2 14 PRO n 2 15 GLY n 2 16 ALA n 2 17 SER n 2 18 VAL n 2 19 LYS n 2 20 LEU n 2 21 SER n 2 22 CYS n 2 23 LYS n 2 24 ALA n 2 25 SER n 2 26 GLY n 2 27 TYR n 2 28 THR n 2 29 PHE n 2 30 THR n 2 31 THR n 2 32 TYR n 2 33 TRP n 2 34 ILE n 2 35 HIS n 2 36 TRP n 2 37 VAL n 2 38 LYS n 2 39 GLN n 2 40 ARG n 2 41 PRO n 2 42 GLY n 2 43 GLN n 2 44 GLY n 2 45 LEU n 2 46 GLU n 2 47 TRP n 2 48 ILE n 2 49 GLY n 2 50 THR n 2 51 ILE n 2 52 TYR n 2 53 PRO n 2 54 GLY n 2 55 SER n 2 56 ASP n 2 57 ASN n 2 58 THR n 2 59 TYR n 2 60 TYR n 2 61 ASP n 2 62 GLU n 2 63 LYS n 2 64 PHE n 2 65 LYS n 2 66 ASN n 2 67 LYS n 2 68 ALA n 2 69 THR n 2 70 LEU n 2 71 THR n 2 72 VAL n 2 73 ASP n 2 74 THR n 2 75 SER n 2 76 SER n 2 77 SER n 2 78 THR n 2 79 ALA n 2 80 PHE n 2 81 MET n 2 82 GLN n 2 83 LEU n 2 84 SER n 2 85 SER n 2 86 LEU n 2 87 THR n 2 88 SER n 2 89 GLU n 2 90 ASP n 2 91 SER n 2 92 ALA n 2 93 VAL n 2 94 TYR n 2 95 PHE n 2 96 CYS n 2 97 THR n 2 98 ARG n 2 99 GLY n 2 100 SER n 2 101 LEU n 2 102 TYR n 2 103 TYR n 2 104 ASN n 2 105 ASN n 2 106 TYR n 2 107 GLY n 2 108 TRP n 2 109 PHE n 2 110 GLY n 2 111 TYR n 2 112 TRP n 2 113 GLY n 2 114 GLN n 2 115 GLY n 2 116 THR n 2 117 LEU n 2 118 VAL n 2 119 THR n 2 120 VAL n 2 121 SER n 2 122 ALA n 2 123 ALA n 2 124 LYS n 2 125 THR n 2 126 THR n 2 127 PRO n 2 128 PRO n 2 129 SER n 2 130 VAL n 2 131 TYR n 2 132 PRO n 2 133 LEU n 2 134 ALA n 2 135 PRO n 2 136 GLY n 2 137 SER n 2 138 ASN n 2 139 ALA n 2 140 ALA n 2 141 SER n 2 142 GLN n 2 143 SER n 2 144 MET n 2 145 VAL n 2 146 THR n 2 147 LEU n 2 148 GLY n 2 149 CYS n 2 150 LEU n 2 151 VAL n 2 152 LYS n 2 153 GLY n 2 154 TYR n 2 155 PHE n 2 156 PRO n 2 157 GLU n 2 158 PRO n 2 159 VAL n 2 160 THR n 2 161 VAL n 2 162 THR n 2 163 TRP n 2 164 ASN n 2 165 SER n 2 166 GLY n 2 167 SER n 2 168 LEU n 2 169 SER n 2 170 SER n 2 171 GLY n 2 172 VAL n 2 173 HIS n 2 174 THR n 2 175 PHE n 2 176 PRO n 2 177 ALA n 2 178 VAL n 2 179 LEU n 2 180 GLN n 2 181 SER n 2 182 ASP n 2 183 LEU n 2 184 TYR n 2 185 THR n 2 186 LEU n 2 187 THR n 2 188 SER n 2 189 SER n 2 190 VAL n 2 191 THR n 2 192 VAL n 2 193 PRO n 2 194 SER n 2 195 SER n 2 196 THR n 2 197 TRP n 2 198 PRO n 2 199 SER n 2 200 GLN n 2 201 THR n 2 202 VAL n 2 203 THR n 2 204 CYS n 2 205 ASN n 2 206 VAL n 2 207 ALA n 2 208 HIS n 2 209 PRO n 2 210 ALA n 2 211 SER n 2 212 SER n 2 213 THR n 2 214 LYS n 2 215 VAL n 2 216 ASP n 2 217 LYS n 2 218 LYS n 2 219 ILE n 2 220 VAL n 2 221 PRO n 2 222 ARG n # loop_ _entity_src_nat.entity_id _entity_src_nat.pdbx_src_id _entity_src_nat.pdbx_alt_source_flag _entity_src_nat.pdbx_beg_seq_num _entity_src_nat.pdbx_end_seq_num _entity_src_nat.common_name _entity_src_nat.pdbx_organism_scientific _entity_src_nat.pdbx_ncbi_taxonomy_id _entity_src_nat.genus _entity_src_nat.species _entity_src_nat.strain _entity_src_nat.tissue _entity_src_nat.tissue_fraction _entity_src_nat.pdbx_secretion _entity_src_nat.pdbx_fragment _entity_src_nat.pdbx_variant _entity_src_nat.pdbx_cell_line _entity_src_nat.pdbx_atcc _entity_src_nat.pdbx_cellular_location _entity_src_nat.pdbx_organ _entity_src_nat.pdbx_organelle _entity_src_nat.pdbx_cell _entity_src_nat.pdbx_plasmid_name _entity_src_nat.pdbx_plasmid_details _entity_src_nat.details 1 1 sample ? ? 'house mouse' 'Mus musculus' 10090 Mus ? Balb/c ? ? ? ? ? ? ? ? ? ? ? ? ? 'Purified from ascitic fluid' 2 1 sample ? ? 'house mouse' 'Mus musculus' 10090 Mus ? Balb/c ? ? ? ? ? ? ? ? ? ? ? ? ? 'Purified from ascitic fluid' # loop_ _struct_ref.id _struct_ref.entity_id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 1 PDB 2OP4 2OP4 ? ? ? 2 2 PDB 2OP4 2OP4 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2OP4 L 1 ? 212 ? 2OP4 1 ? 212 ? 1 212 2 2 2OP4 H 1 ? 222 ? 2OP4 1 ? 228 ? 1 228 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2OP4 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.53 _exptl_crystal.density_percent_sol 51.43 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details '10% (w/v) PEG 8000, 0.1M Imidazole, pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 298K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.pdbx_collection_date 2007-01-13 _diffrn_detector.details 'Flat mirror (vertical focusing)' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'single crystal Si(111) bent (horizontal focusing)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.03317 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SSRL BEAMLINE BL11-1' _diffrn_source.pdbx_synchrotron_site SSRL _diffrn_source.pdbx_synchrotron_beamline BL11-1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.03317 # _reflns.entry_id 2OP4 _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.d_resolution_high 2.85 _reflns.d_resolution_low 50.0 _reflns.number_all 11938 _reflns.number_obs 11938 _reflns.percent_possible_obs 99.6 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.062 _reflns.pdbx_netI_over_sigmaI 26.1 _reflns.B_iso_Wilson_estimate 83.5 _reflns.pdbx_redundancy 3.6 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.850 _reflns_shell.d_res_low 2.924 _reflns_shell.percent_possible_all 99.9 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.534 _reflns_shell.meanI_over_sigI_obs 2.7 _reflns_shell.pdbx_redundancy 3.6 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 782 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 2OP4 _refine.ls_number_reflns_obs 11064 _refine.ls_number_reflns_all 11064 _refine.pdbx_ls_sigma_I 0 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 35.40 _refine.ls_d_res_high 2.85 _refine.ls_percent_reflns_obs 99.65 _refine.ls_R_factor_obs 0.20255 _refine.ls_R_factor_all 0.20255 _refine.ls_R_factor_R_work 0.19959 _refine.ls_R_factor_R_free 0.26329 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.8 _refine.ls_number_reflns_R_free 556 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.951 _refine.correlation_coeff_Fo_to_Fc_free 0.922 _refine.B_iso_mean 50.953 _refine.aniso_B[1][1] -0.47 _refine.aniso_B[2][2] 0.71 _refine.aniso_B[3][3] -0.25 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'PDB entry 2NTF' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free 0.416 _refine.overall_SU_ML 0.327 _refine.overall_SU_B 39.254 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3277 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 4 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 3281 _refine_hist.d_res_high 2.85 _refine_hist.d_res_low 35.40 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.013 0.022 ? 3372 'X-RAY DIFFRACTION' ? r_bond_other_d 0.002 0.020 ? 2187 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.488 1.937 ? 4614 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.837 3.002 ? 5354 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 7.462 5.000 ? 426 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 36.126 24.094 ? 127 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 18.421 15.000 ? 506 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 12.196 15.000 ? 10 'X-RAY DIFFRACTION' ? r_chiral_restr 0.079 0.200 ? 528 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.004 0.020 ? 3741 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 669 'X-RAY DIFFRACTION' ? r_nbd_refined 0.227 0.200 ? 613 'X-RAY DIFFRACTION' ? r_nbd_other 0.215 0.200 ? 2187 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.200 0.200 ? 1653 'X-RAY DIFFRACTION' ? r_nbtor_other 0.096 0.200 ? 1955 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.128 0.200 ? 97 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other 0.041 0.200 ? 1 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.242 0.200 ? 15 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 0.302 0.200 ? 24 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.188 0.200 ? 5 'X-RAY DIFFRACTION' ? r_mcbond_it 0.527 1.500 ? 2609 'X-RAY DIFFRACTION' ? r_mcbond_other 0.079 1.500 ? 865 'X-RAY DIFFRACTION' ? r_mcangle_it 0.721 2.000 ? 3475 'X-RAY DIFFRACTION' ? r_scbond_it 1.060 3.000 ? 1506 'X-RAY DIFFRACTION' ? r_scangle_it 1.599 4.500 ? 1139 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.850 _refine_ls_shell.d_res_low 2.924 _refine_ls_shell.number_reflns_R_work 771 _refine_ls_shell.R_factor_R_work 0.329 _refine_ls_shell.percent_reflns_obs 99.88 _refine_ls_shell.R_factor_R_free 0.575 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 46 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2OP4 _struct.title 'Crystal Structure of Quorum-Quenching Antibody 1G9' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2OP4 _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM' _struct_keywords.text 'Immunoglobulin, antibody, Fab, induced fit, quorum sensing, homoserine lactone, IMMUNE SYSTEM' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 _struct_biol.details 'The entry contains the crystallographic asymmetric unit which consists of 1 biological molecule: LH.' _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 30 ? TYR A 34 ? THR L 28 TYR L 32 5 ? 5 HELX_P HELX_P2 2 GLN A 81 ? GLU A 85 ? GLN L 79 GLU L 83 5 ? 5 HELX_P HELX_P3 3 SER A 124 ? THR A 130 ? SER L 121 THR L 127 1 ? 7 HELX_P HELX_P4 4 ALA A 185 ? GLU A 189 ? ALA L 183 GLU L 187 1 ? 5 HELX_P HELX_P5 5 THR B 28 ? TYR B 32 ? THR H 28 TYR H 32 5 ? 5 HELX_P HELX_P6 6 GLU B 62 ? LYS B 65 ? GLU H 61 LYS H 64 5 ? 4 HELX_P HELX_P7 7 THR B 87 ? SER B 91 ? THR H 83 SER H 87 5 ? 5 HELX_P HELX_P8 8 SER B 195 ? GLN B 200 ? SER H 196 GLN H 203 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 22 SG ? ? ? 1_555 A CYS 90 SG ? ? L CYS 23 L CYS 88 1_555 ? ? ? ? ? ? ? 2.056 ? ? disulf2 disulf ? ? A CYS 137 SG ? ? ? 1_555 A CYS 196 SG ? ? L CYS 134 L CYS 194 1_555 ? ? ? ? ? ? ? 2.051 ? ? disulf3 disulf ? ? B CYS 22 SG ? ? ? 1_555 B CYS 96 SG ? ? H CYS 22 H CYS 92 1_555 ? ? ? ? ? ? ? 2.042 ? ? disulf4 disulf ? ? B CYS 149 SG ? ? ? 1_555 B CYS 204 SG ? ? H CYS 142 H CYS 208 1_555 ? ? ? ? ? ? ? 2.338 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 TYR 143 A . ? TYR 140 L PRO 144 A ? PRO 141 L 1 1.21 2 PHE 155 B . ? PHE 148 H PRO 156 B ? PRO 149 H 1 -6.92 3 GLU 157 B . ? GLU 150 H PRO 158 B ? PRO 151 H 1 -8.88 4 TRP 197 B . ? TRP 199 H PRO 198 B ? PRO 200 H 1 12.01 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 6 ? C ? 4 ? D ? 4 ? E ? 4 ? F ? 4 ? G ? 4 ? H ? 6 ? I ? 4 ? J ? 4 ? K ? 4 ? L ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel C 1 2 ? parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel E 3 4 ? anti-parallel F 1 2 ? anti-parallel F 2 3 ? anti-parallel F 3 4 ? anti-parallel G 1 2 ? anti-parallel G 2 3 ? anti-parallel G 3 4 ? anti-parallel H 1 2 ? parallel H 2 3 ? anti-parallel H 3 4 ? anti-parallel H 4 5 ? anti-parallel H 5 6 ? anti-parallel I 1 2 ? parallel I 2 3 ? anti-parallel I 3 4 ? anti-parallel J 1 2 ? anti-parallel J 2 3 ? anti-parallel J 3 4 ? anti-parallel K 1 2 ? anti-parallel K 2 3 ? anti-parallel K 3 4 ? anti-parallel L 1 2 ? anti-parallel L 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 4 ? GLN A 6 ? VAL L 4 GLN L 6 A 2 THR A 17 ? SER A 24 ? THR L 18 SER L 25 A 3 LYS A 72 ? THR A 78 ? LYS L 70 THR L 76 A 4 PHE A 64 ? ILE A 69 ? PHE L 62 ILE L 67 B 1 ALA A 9 ? THR A 12 ? ALA L 9 THR L 13 B 2 THR A 104 ? VAL A 108 ? THR L 102 VAL L 106 B 3 SER A 86 ? TYR A 94 ? SER L 84 TYR L 92 B 4 ASN A 36 ? LYS A 41 ? ASN L 34 LYS L 39 B 5 PHE A 45 ? GLY A 51 ? PHE L 43 GLY L 49 B 6 ASN A 55 ? ARG A 56 ? ASN L 53 ARG L 54 C 1 ALA A 9 ? THR A 12 ? ALA L 9 THR L 13 C 2 THR A 104 ? VAL A 108 ? THR L 102 VAL L 106 C 3 SER A 86 ? TYR A 94 ? SER L 84 TYR L 92 C 4 HIS A 97 ? PHE A 100 ? HIS L 95 PHE L 98 D 1 SER A 117 ? PHE A 121 ? SER L 114 PHE L 118 D 2 LYS A 132 ? PHE A 142 ? LYS L 129 PHE L 139 D 3 TYR A 175 ? THR A 184 ? TYR L 173 THR L 182 D 4 MET A 162 ? THR A 164 ? MET L 159 THR L 161 E 1 SER A 117 ? PHE A 121 ? SER L 114 PHE L 118 E 2 LYS A 132 ? PHE A 142 ? LYS L 129 PHE L 139 E 3 TYR A 175 ? THR A 184 ? TYR L 173 THR L 182 E 4 SER A 168 ? LYS A 169 ? SER L 165 LYS L 166 F 1 THR A 156 ? PRO A 157 ? THR L 153 PRO L 154 F 2 THR A 148 ? VAL A 153 ? THR L 145 VAL L 150 F 3 SER A 193 ? THR A 199 ? SER L 191 THR L 197 F 4 THR A 204 ? SER A 210 ? THR L 204 SER L 210 G 1 GLN B 3 ? GLN B 6 ? GLN H 3 GLN H 6 G 2 VAL B 18 ? SER B 25 ? VAL H 18 SER H 25 G 3 THR B 78 ? LEU B 83 ? THR H 77 LEU H 82 G 4 ALA B 68 ? ASP B 73 ? ALA H 67 ASP H 72 H 1 SER B 9 ? VAL B 12 ? SER H 9 VAL H 12 H 2 THR B 116 ? VAL B 120 ? THR H 107 VAL H 111 H 3 ALA B 92 ? ARG B 98 ? ALA H 88 ARG H 94 H 4 ILE B 34 ? GLN B 39 ? ILE H 34 GLN H 39 H 5 LEU B 45 ? ILE B 51 ? LEU H 45 ILE H 51 H 6 THR B 58 ? TYR B 60 ? THR H 57 TYR H 59 I 1 SER B 9 ? VAL B 12 ? SER H 9 VAL H 12 I 2 THR B 116 ? VAL B 120 ? THR H 107 VAL H 111 I 3 ALA B 92 ? ARG B 98 ? ALA H 88 ARG H 94 I 4 TYR B 111 ? TRP B 112 ? TYR H 102 TRP H 103 J 1 SER B 129 ? LEU B 133 ? SER H 120 LEU H 124 J 2 MET B 144 ? TYR B 154 ? MET H 137 TYR H 147 J 3 LEU B 183 ? PRO B 193 ? LEU H 184 PRO H 194 J 4 VAL B 172 ? THR B 174 ? VAL H 171 THR H 173 K 1 SER B 129 ? LEU B 133 ? SER H 120 LEU H 124 K 2 MET B 144 ? TYR B 154 ? MET H 137 TYR H 147 K 3 LEU B 183 ? PRO B 193 ? LEU H 184 PRO H 194 K 4 VAL B 178 ? GLN B 180 ? VAL H 177 GLN H 181 L 1 THR B 160 ? TRP B 163 ? THR H 153 TRP H 157 L 2 THR B 203 ? HIS B 208 ? THR H 206 HIS H 212 L 3 THR B 213 ? LYS B 218 ? THR H 217 LYS H 222 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N THR A 5 ? N THR L 5 O ARG A 23 ? O ARG L 24 A 2 3 N LEU A 20 ? N LEU L 21 O LEU A 75 ? O LEU L 73 A 3 4 O THR A 76 ? O THR L 74 N SER A 65 ? N SER L 63 B 1 2 N LEU A 10 ? N LEU L 11 O THR A 107 ? O THR L 105 B 2 3 O LEU A 106 ? O LEU L 104 N SER A 86 ? N SER L 84 B 3 4 O PHE A 89 ? O PHE L 87 N VAL A 38 ? N VAL L 36 B 4 5 N TRP A 37 ? N TRP L 35 O ILE A 50 ? O ILE L 48 B 5 6 N GLY A 51 ? N GLY L 49 O ASN A 55 ? O ASN L 53 C 1 2 N LEU A 10 ? N LEU L 11 O THR A 107 ? O THR L 105 C 2 3 O LEU A 106 ? O LEU L 104 N SER A 86 ? N SER L 84 C 3 4 N TYR A 94 ? N TYR L 92 O HIS A 97 ? O HIS L 95 D 1 2 N THR A 119 ? N THR L 116 O THR A 138 ? O THR L 135 D 2 3 N ALA A 133 ? N ALA L 130 O LEU A 183 ? O LEU L 181 D 3 4 O TYR A 180 ? O TYR L 178 N GLU A 163 ? N GLU L 160 E 1 2 N THR A 119 ? N THR L 116 O THR A 138 ? O THR L 135 E 2 3 N ALA A 133 ? N ALA L 130 O LEU A 183 ? O LEU L 181 E 3 4 O MET A 176 ? O MET L 174 N SER A 168 ? N SER L 165 F 1 2 O THR A 156 ? O THR L 153 N VAL A 153 ? N VAL L 150 F 2 3 N ASP A 150 ? N ASP L 147 O GLN A 197 ? O GLN L 195 F 3 4 N CYS A 196 ? N CYS L 194 O LYS A 207 ? O LYS L 207 G 1 2 N GLN B 3 ? N GLN H 3 O SER B 25 ? O SER H 25 G 2 3 N VAL B 18 ? N VAL H 18 O LEU B 83 ? O LEU H 82 G 3 4 O PHE B 80 ? O PHE H 79 N THR B 71 ? N THR H 70 H 1 2 N VAL B 12 ? N VAL H 12 O THR B 119 ? O THR H 110 H 2 3 O VAL B 118 ? O VAL H 109 N ALA B 92 ? N ALA H 88 H 3 4 O VAL B 93 ? O VAL H 89 N GLN B 39 ? N GLN H 39 H 4 5 N LYS B 38 ? N LYS H 38 O GLU B 46 ? O GLU H 46 H 5 6 N THR B 50 ? N THR H 50 O TYR B 59 ? O TYR H 58 I 1 2 N VAL B 12 ? N VAL H 12 O THR B 119 ? O THR H 110 I 2 3 O VAL B 118 ? O VAL H 109 N ALA B 92 ? N ALA H 88 I 3 4 N ARG B 98 ? N ARG H 94 O TYR B 111 ? O TYR H 102 J 1 2 N LEU B 133 ? N LEU H 124 O GLY B 148 ? O GLY H 141 J 2 3 N VAL B 151 ? N VAL H 144 O LEU B 186 ? O LEU H 187 J 3 4 O SER B 189 ? O SER H 190 N HIS B 173 ? N HIS H 172 K 1 2 N LEU B 133 ? N LEU H 124 O GLY B 148 ? O GLY H 141 K 2 3 N VAL B 151 ? N VAL H 144 O LEU B 186 ? O LEU H 187 K 3 4 O LEU B 183 ? O LEU H 184 N GLN B 180 ? N GLN H 181 L 1 2 N THR B 162 ? N THR H 156 O ASN B 205 ? O ASN H 209 L 2 3 N VAL B 206 ? N VAL H 210 O VAL B 215 ? O VAL H 219 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id H _struct_site.pdbx_auth_comp_id EDO _struct_site.pdbx_auth_seq_id 229 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 7 _struct_site.details 'BINDING SITE FOR RESIDUE EDO H 229' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 7 HIS B 35 ? HIS H 35 . ? 1_555 ? 2 AC1 7 ASN B 104 ? ASN H 100 . ? 1_555 ? 3 AC1 7 GLY B 107 C GLY H 100 . ? 1_555 ? 4 AC1 7 TRP B 108 D TRP H 100 . ? 1_555 ? 5 AC1 7 PHE B 109 E PHE H 100 . ? 1_555 ? 6 AC1 7 ASN A 36 ? ASN L 34 . ? 1_555 ? 7 AC1 7 TRP A 98 ? TRP L 96 . ? 1_555 ? # _database_PDB_matrix.entry_id 2OP4 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2OP4 _atom_sites.fract_transf_matrix[1][1] 0.017567 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013881 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008610 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLN 1 1 1 GLN GLN L . n A 1 2 ALA 2 2 2 ALA ALA L . n A 1 3 VAL 3 3 3 VAL VAL L . n A 1 4 VAL 4 4 4 VAL VAL L . n A 1 5 THR 5 5 5 THR THR L . n A 1 6 GLN 6 6 6 GLN GLN L . n A 1 7 GLU 7 7 7 GLU GLU L . n A 1 8 SER 8 8 8 SER SER L . n A 1 9 ALA 9 9 9 ALA ALA L . n A 1 10 LEU 10 11 11 LEU LEU L . n A 1 11 THR 11 12 12 THR THR L . n A 1 12 THR 12 13 13 THR THR L . n A 1 13 SER 13 14 14 SER SER L . n A 1 14 PRO 14 15 15 PRO PRO L . n A 1 15 GLY 15 16 16 GLY GLY L . n A 1 16 GLU 16 17 17 GLU GLU L . n A 1 17 THR 17 18 18 THR THR L . n A 1 18 VAL 18 19 19 VAL VAL L . n A 1 19 THR 19 20 20 THR THR L . n A 1 20 LEU 20 21 21 LEU LEU L . n A 1 21 THR 21 22 22 THR THR L . n A 1 22 CYS 22 23 23 CYS CYS L . n A 1 23 ARG 23 24 24 ARG ARG L . n A 1 24 SER 24 25 25 SER SER L . n A 1 25 SER 25 26 26 SER SER L . n A 1 26 THR 26 27 27 THR THR L . n A 1 27 GLY 27 27 27 GLY GLY L A n A 1 28 ALA 28 27 27 ALA ALA L B n A 1 29 VAL 29 27 27 VAL VAL L C n A 1 30 THR 30 28 28 THR THR L . n A 1 31 THR 31 29 29 THR THR L . n A 1 32 ARG 32 30 30 ARG ARG L . n A 1 33 ASN 33 31 31 ASN ASN L . n A 1 34 TYR 34 32 32 TYR TYR L . n A 1 35 ALA 35 33 33 ALA ALA L . n A 1 36 ASN 36 34 34 ASN ASN L . n A 1 37 TRP 37 35 35 TRP TRP L . n A 1 38 VAL 38 36 36 VAL VAL L . n A 1 39 GLN 39 37 37 GLN GLN L . n A 1 40 GLU 40 38 38 GLU GLU L . n A 1 41 LYS 41 39 39 LYS LYS L . n A 1 42 PRO 42 40 40 PRO PRO L . n A 1 43 ASP 43 41 41 ASP ASP L . n A 1 44 HIS 44 42 42 HIS HIS L . n A 1 45 PHE 45 43 43 PHE PHE L . n A 1 46 PHE 46 44 44 PHE PHE L . n A 1 47 THR 47 45 45 THR THR L . n A 1 48 GLY 48 46 46 GLY GLY L . n A 1 49 LEU 49 47 47 LEU LEU L . n A 1 50 ILE 50 48 48 ILE ILE L . n A 1 51 GLY 51 49 49 GLY GLY L . n A 1 52 ASP 52 50 50 ASP ASP L . n A 1 53 THR 53 51 51 THR THR L . n A 1 54 ASN 54 52 52 ASN ASN L . n A 1 55 ASN 55 53 53 ASN ASN L . n A 1 56 ARG 56 54 54 ARG ARG L . n A 1 57 ALA 57 55 55 ALA ALA L . n A 1 58 PRO 58 56 56 PRO PRO L . n A 1 59 GLY 59 57 57 GLY GLY L . n A 1 60 VAL 60 58 58 VAL VAL L . n A 1 61 PRO 61 59 59 PRO PRO L . n A 1 62 ALA 62 60 60 ALA ALA L . n A 1 63 ARG 63 61 61 ARG ARG L . n A 1 64 PHE 64 62 62 PHE PHE L . n A 1 65 SER 65 63 63 SER SER L . n A 1 66 GLY 66 64 64 GLY GLY L . n A 1 67 SER 67 65 65 SER SER L . n A 1 68 LEU 68 66 66 LEU LEU L . n A 1 69 ILE 69 67 67 ILE ILE L . n A 1 70 GLY 70 68 68 GLY GLY L . n A 1 71 HIS 71 69 69 HIS HIS L . n A 1 72 LYS 72 70 70 LYS LYS L . n A 1 73 ALA 73 71 71 ALA ALA L . n A 1 74 ALA 74 72 72 ALA ALA L . n A 1 75 LEU 75 73 73 LEU LEU L . n A 1 76 THR 76 74 74 THR THR L . n A 1 77 ILE 77 75 75 ILE ILE L . n A 1 78 THR 78 76 76 THR THR L . n A 1 79 GLY 79 77 77 GLY GLY L . n A 1 80 ALA 80 78 78 ALA ALA L . n A 1 81 GLN 81 79 79 GLN GLN L . n A 1 82 THR 82 80 80 THR THR L . n A 1 83 GLU 83 81 81 GLU GLU L . n A 1 84 ASP 84 82 82 ASP ASP L . n A 1 85 GLU 85 83 83 GLU GLU L . n A 1 86 SER 86 84 84 SER SER L . n A 1 87 VAL 87 85 85 VAL VAL L . n A 1 88 TYR 88 86 86 TYR TYR L . n A 1 89 PHE 89 87 87 PHE PHE L . n A 1 90 CYS 90 88 88 CYS CYS L . n A 1 91 ALA 91 89 89 ALA ALA L . n A 1 92 LEU 92 90 90 LEU LEU L . n A 1 93 TRP 93 91 91 TRP TRP L . n A 1 94 TYR 94 92 92 TYR TYR L . n A 1 95 SER 95 93 93 SER SER L . n A 1 96 ASN 96 94 94 ASN ASN L . n A 1 97 HIS 97 95 95 HIS HIS L . n A 1 98 TRP 98 96 96 TRP TRP L . n A 1 99 VAL 99 97 97 VAL VAL L . n A 1 100 PHE 100 98 98 PHE PHE L . n A 1 101 GLY 101 99 99 GLY GLY L . n A 1 102 GLY 102 100 100 GLY GLY L . n A 1 103 GLY 103 101 101 GLY GLY L . n A 1 104 THR 104 102 102 THR THR L . n A 1 105 LYS 105 103 103 LYS LYS L . n A 1 106 LEU 106 104 104 LEU LEU L . n A 1 107 THR 107 105 105 THR THR L . n A 1 108 VAL 108 106 106 VAL VAL L . n A 1 109 LEU 109 106 106 LEU LEU L A n A 1 110 GLY 110 107 107 GLY GLY L . n A 1 111 GLN 111 108 108 GLN GLN L . n A 1 112 PRO 112 109 109 PRO PRO L . n A 1 113 LYS 113 110 110 LYS LYS L . n A 1 114 SER 114 111 111 SER SER L . n A 1 115 SER 115 112 112 SER SER L . n A 1 116 PRO 116 113 113 PRO PRO L . n A 1 117 SER 117 114 114 SER SER L . n A 1 118 VAL 118 115 115 VAL VAL L . n A 1 119 THR 119 116 116 THR THR L . n A 1 120 LEU 120 117 117 LEU LEU L . n A 1 121 PHE 121 118 118 PHE PHE L . n A 1 122 PRO 122 119 119 PRO PRO L . n A 1 123 PRO 123 120 120 PRO PRO L . n A 1 124 SER 124 121 121 SER SER L . n A 1 125 SER 125 122 122 SER SER L . n A 1 126 GLU 126 123 123 GLU GLU L . n A 1 127 GLU 127 124 124 GLU GLU L . n A 1 128 LEU 128 125 125 LEU LEU L . n A 1 129 GLU 129 126 126 GLU GLU L . n A 1 130 THR 130 127 127 THR THR L . n A 1 131 ASN 131 128 128 ASN ASN L . n A 1 132 LYS 132 129 129 LYS LYS L . n A 1 133 ALA 133 130 130 ALA ALA L . n A 1 134 THR 134 131 131 THR THR L . n A 1 135 LEU 135 132 132 LEU LEU L . n A 1 136 VAL 136 133 133 VAL VAL L . n A 1 137 CYS 137 134 134 CYS CYS L . n A 1 138 THR 138 135 135 THR THR L . n A 1 139 ILE 139 136 136 ILE ILE L . n A 1 140 THR 140 137 137 THR THR L . n A 1 141 ASP 141 138 138 ASP ASP L . n A 1 142 PHE 142 139 139 PHE PHE L . n A 1 143 TYR 143 140 140 TYR TYR L . n A 1 144 PRO 144 141 141 PRO PRO L . n A 1 145 GLY 145 142 142 GLY GLY L . n A 1 146 VAL 146 143 143 VAL VAL L . n A 1 147 VAL 147 144 144 VAL VAL L . n A 1 148 THR 148 145 145 THR THR L . n A 1 149 VAL 149 146 146 VAL VAL L . n A 1 150 ASP 150 147 147 ASP ASP L . n A 1 151 TRP 151 148 148 TRP TRP L . n A 1 152 LYS 152 149 149 LYS LYS L . n A 1 153 VAL 153 150 150 VAL VAL L . n A 1 154 ASP 154 151 151 ASP ASP L . n A 1 155 GLY 155 152 152 GLY GLY L . n A 1 156 THR 156 153 153 THR THR L . n A 1 157 PRO 157 154 154 PRO PRO L . n A 1 158 VAL 158 155 155 VAL VAL L . n A 1 159 THR 159 156 156 THR THR L . n A 1 160 GLN 160 157 157 GLN GLN L . n A 1 161 GLY 161 158 158 GLY GLY L . n A 1 162 MET 162 159 159 MET MET L . n A 1 163 GLU 163 160 160 GLU GLU L . n A 1 164 THR 164 161 161 THR THR L . n A 1 165 THR 165 162 162 THR THR L . n A 1 166 GLN 166 163 163 GLN GLN L . n A 1 167 PRO 167 164 164 PRO PRO L . n A 1 168 SER 168 165 165 SER SER L . n A 1 169 LYS 169 166 166 LYS LYS L . n A 1 170 GLN 170 167 167 GLN GLN L . n A 1 171 SER 171 168 168 SER SER L . n A 1 172 ASN 172 170 170 ASN ASN L . n A 1 173 ASN 173 171 171 ASN ASN L . n A 1 174 LYS 174 172 172 LYS LYS L . n A 1 175 TYR 175 173 173 TYR TYR L . n A 1 176 MET 176 174 174 MET MET L . n A 1 177 ALA 177 175 175 ALA ALA L . n A 1 178 SER 178 176 176 SER SER L . n A 1 179 SER 179 177 177 SER SER L . n A 1 180 TYR 180 178 178 TYR TYR L . n A 1 181 LEU 181 179 179 LEU LEU L . n A 1 182 THR 182 180 180 THR THR L . n A 1 183 LEU 183 181 181 LEU LEU L . n A 1 184 THR 184 182 182 THR THR L . n A 1 185 ALA 185 183 183 ALA ALA L . n A 1 186 GLY 186 184 184 GLY GLY L . n A 1 187 ALA 187 185 185 ALA ALA L . n A 1 188 TRP 188 186 186 TRP TRP L . n A 1 189 GLU 189 187 187 GLU GLU L . n A 1 190 ARG 190 188 188 ARG ARG L . n A 1 191 HIS 191 189 189 HIS HIS L . n A 1 192 SER 192 190 190 SER SER L . n A 1 193 SER 193 191 191 SER SER L . n A 1 194 TYR 194 192 192 TYR TYR L . n A 1 195 SER 195 193 193 SER SER L . n A 1 196 CYS 196 194 194 CYS CYS L . n A 1 197 GLN 197 195 195 GLN GLN L . n A 1 198 VAL 198 196 196 VAL VAL L . n A 1 199 THR 199 197 197 THR THR L . n A 1 200 HIS 200 198 198 HIS HIS L . n A 1 201 GLU 201 199 199 GLU GLU L . n A 1 202 GLY 202 200 200 GLY GLY L . n A 1 203 HIS 203 203 203 HIS HIS L . n A 1 204 THR 204 204 204 THR THR L . n A 1 205 VAL 205 205 205 VAL VAL L . n A 1 206 GLU 206 206 206 GLU GLU L . n A 1 207 LYS 207 207 207 LYS LYS L . n A 1 208 SER 208 208 208 SER SER L . n A 1 209 LEU 209 209 209 LEU LEU L . n A 1 210 SER 210 210 210 SER SER L . n A 1 211 ARG 211 211 211 ARG ARG L . n A 1 212 ALA 212 212 212 ALA ALA L . n B 2 1 GLN 1 1 1 GLN GLN H . n B 2 2 VAL 2 2 2 VAL VAL H . n B 2 3 GLN 3 3 3 GLN GLN H . n B 2 4 LEU 4 4 4 LEU LEU H . n B 2 5 GLN 5 5 5 GLN GLN H . n B 2 6 GLN 6 6 6 GLN GLN H . n B 2 7 SER 7 7 7 SER SER H . n B 2 8 GLY 8 8 8 GLY GLY H . n B 2 9 SER 9 9 9 SER SER H . n B 2 10 GLU 10 10 10 GLU GLU H . n B 2 11 LEU 11 11 11 LEU LEU H . n B 2 12 VAL 12 12 12 VAL VAL H . n B 2 13 ARG 13 13 13 ARG ARG H . n B 2 14 PRO 14 14 14 PRO PRO H . n B 2 15 GLY 15 15 15 GLY GLY H . n B 2 16 ALA 16 16 16 ALA ALA H . n B 2 17 SER 17 17 17 SER SER H . n B 2 18 VAL 18 18 18 VAL VAL H . n B 2 19 LYS 19 19 19 LYS LYS H . n B 2 20 LEU 20 20 20 LEU LEU H . n B 2 21 SER 21 21 21 SER SER H . n B 2 22 CYS 22 22 22 CYS CYS H . n B 2 23 LYS 23 23 23 LYS LYS H . n B 2 24 ALA 24 24 24 ALA ALA H . n B 2 25 SER 25 25 25 SER SER H . n B 2 26 GLY 26 26 26 GLY GLY H . n B 2 27 TYR 27 27 27 TYR TYR H . n B 2 28 THR 28 28 28 THR THR H . n B 2 29 PHE 29 29 29 PHE PHE H . n B 2 30 THR 30 30 30 THR THR H . n B 2 31 THR 31 31 31 THR THR H . n B 2 32 TYR 32 32 32 TYR TYR H . n B 2 33 TRP 33 33 33 TRP TRP H . n B 2 34 ILE 34 34 34 ILE ILE H . n B 2 35 HIS 35 35 35 HIS HIS H . n B 2 36 TRP 36 36 36 TRP TRP H . n B 2 37 VAL 37 37 37 VAL VAL H . n B 2 38 LYS 38 38 38 LYS LYS H . n B 2 39 GLN 39 39 39 GLN GLN H . n B 2 40 ARG 40 40 40 ARG ARG H . n B 2 41 PRO 41 41 41 PRO PRO H . n B 2 42 GLY 42 42 42 GLY GLY H . n B 2 43 GLN 43 43 43 GLN GLN H . n B 2 44 GLY 44 44 44 GLY GLY H . n B 2 45 LEU 45 45 45 LEU LEU H . n B 2 46 GLU 46 46 46 GLU GLU H . n B 2 47 TRP 47 47 47 TRP TRP H . n B 2 48 ILE 48 48 48 ILE ILE H . n B 2 49 GLY 49 49 49 GLY GLY H . n B 2 50 THR 50 50 50 THR THR H . n B 2 51 ILE 51 51 51 ILE ILE H . n B 2 52 TYR 52 52 52 TYR TYR H . n B 2 53 PRO 53 52 52 PRO PRO H A n B 2 54 GLY 54 53 53 GLY GLY H . n B 2 55 SER 55 54 54 SER SER H . n B 2 56 ASP 56 55 55 ASP ASP H . n B 2 57 ASN 57 56 56 ASN ASN H . n B 2 58 THR 58 57 57 THR THR H . n B 2 59 TYR 59 58 58 TYR TYR H . n B 2 60 TYR 60 59 59 TYR TYR H . n B 2 61 ASP 61 60 60 ASP ASP H . n B 2 62 GLU 62 61 61 GLU GLU H . n B 2 63 LYS 63 62 62 LYS LYS H . n B 2 64 PHE 64 63 63 PHE PHE H . n B 2 65 LYS 65 64 64 LYS LYS H . n B 2 66 ASN 66 65 65 ASN ASN H . n B 2 67 LYS 67 66 66 LYS LYS H . n B 2 68 ALA 68 67 67 ALA ALA H . n B 2 69 THR 69 68 68 THR THR H . n B 2 70 LEU 70 69 69 LEU LEU H . n B 2 71 THR 71 70 70 THR THR H . n B 2 72 VAL 72 71 71 VAL VAL H . n B 2 73 ASP 73 72 72 ASP ASP H . n B 2 74 THR 74 73 73 THR THR H . n B 2 75 SER 75 74 74 SER SER H . n B 2 76 SER 76 75 75 SER SER H . n B 2 77 SER 77 76 76 SER SER H . n B 2 78 THR 78 77 77 THR THR H . n B 2 79 ALA 79 78 78 ALA ALA H . n B 2 80 PHE 80 79 79 PHE PHE H . n B 2 81 MET 81 80 80 MET MET H . n B 2 82 GLN 82 81 81 GLN GLN H . n B 2 83 LEU 83 82 82 LEU LEU H . n B 2 84 SER 84 82 82 SER SER H A n B 2 85 SER 85 82 82 SER SER H B n B 2 86 LEU 86 82 82 LEU LEU H C n B 2 87 THR 87 83 83 THR THR H . n B 2 88 SER 88 84 84 SER SER H . n B 2 89 GLU 89 85 85 GLU GLU H . n B 2 90 ASP 90 86 86 ASP ASP H . n B 2 91 SER 91 87 87 SER SER H . n B 2 92 ALA 92 88 88 ALA ALA H . n B 2 93 VAL 93 89 89 VAL VAL H . n B 2 94 TYR 94 90 90 TYR TYR H . n B 2 95 PHE 95 91 91 PHE PHE H . n B 2 96 CYS 96 92 92 CYS CYS H . n B 2 97 THR 97 93 93 THR THR H . n B 2 98 ARG 98 94 94 ARG ARG H . n B 2 99 GLY 99 95 95 GLY GLY H . n B 2 100 SER 100 96 96 SER SER H . n B 2 101 LEU 101 97 97 LEU LEU H . n B 2 102 TYR 102 98 98 TYR TYR H . n B 2 103 TYR 103 99 99 TYR TYR H . n B 2 104 ASN 104 100 100 ASN ASN H . n B 2 105 ASN 105 100 100 ASN ASN H A n B 2 106 TYR 106 100 100 TYR TYR H B n B 2 107 GLY 107 100 100 GLY GLY H C n B 2 108 TRP 108 100 100 TRP TRP H D n B 2 109 PHE 109 100 100 PHE PHE H E n B 2 110 GLY 110 101 101 GLY GLY H . n B 2 111 TYR 111 102 102 TYR TYR H . n B 2 112 TRP 112 103 103 TRP TRP H . n B 2 113 GLY 113 104 104 GLY GLY H . n B 2 114 GLN 114 105 105 GLN GLN H . n B 2 115 GLY 115 106 106 GLY GLY H . n B 2 116 THR 116 107 107 THR THR H . n B 2 117 LEU 117 108 108 LEU LEU H . n B 2 118 VAL 118 109 109 VAL VAL H . n B 2 119 THR 119 110 110 THR THR H . n B 2 120 VAL 120 111 111 VAL VAL H . n B 2 121 SER 121 112 112 SER SER H . n B 2 122 ALA 122 113 113 ALA ALA H . n B 2 123 ALA 123 114 114 ALA ALA H . n B 2 124 LYS 124 115 115 LYS LYS H . n B 2 125 THR 125 116 116 THR THR H . n B 2 126 THR 126 117 117 THR THR H . n B 2 127 PRO 127 118 118 PRO PRO H . n B 2 128 PRO 128 119 119 PRO PRO H . n B 2 129 SER 129 120 120 SER SER H . n B 2 130 VAL 130 121 121 VAL VAL H . n B 2 131 TYR 131 122 122 TYR TYR H . n B 2 132 PRO 132 123 123 PRO PRO H . n B 2 133 LEU 133 124 124 LEU LEU H . n B 2 134 ALA 134 125 125 ALA ALA H . n B 2 135 PRO 135 126 126 PRO PRO H . n B 2 136 GLY 136 127 127 GLY GLY H . n B 2 137 SER 137 128 128 SER SER H . n B 2 138 ASN 138 131 ? ? ? H . n B 2 139 ALA 139 132 ? ? ? H . n B 2 140 ALA 140 133 ? ? ? H . n B 2 141 SER 141 134 ? ? ? H . n B 2 142 GLN 142 135 ? ? ? H . n B 2 143 SER 143 136 136 SER SER H . n B 2 144 MET 144 137 137 MET MET H . n B 2 145 VAL 145 138 138 VAL VAL H . n B 2 146 THR 146 139 139 THR THR H . n B 2 147 LEU 147 140 140 LEU LEU H . n B 2 148 GLY 148 141 141 GLY GLY H . n B 2 149 CYS 149 142 142 CYS CYS H . n B 2 150 LEU 150 143 143 LEU LEU H . n B 2 151 VAL 151 144 144 VAL VAL H . n B 2 152 LYS 152 145 145 LYS LYS H . n B 2 153 GLY 153 146 146 GLY GLY H . n B 2 154 TYR 154 147 147 TYR TYR H . n B 2 155 PHE 155 148 148 PHE PHE H . n B 2 156 PRO 156 149 149 PRO PRO H . n B 2 157 GLU 157 150 150 GLU GLU H . n B 2 158 PRO 158 151 151 PRO PRO H . n B 2 159 VAL 159 152 152 VAL VAL H . n B 2 160 THR 160 153 153 THR THR H . n B 2 161 VAL 161 154 154 VAL VAL H . n B 2 162 THR 162 156 156 THR THR H . n B 2 163 TRP 163 157 157 TRP TRP H . n B 2 164 ASN 164 162 162 ASN ASN H . n B 2 165 SER 165 163 163 SER SER H . n B 2 166 GLY 166 164 164 GLY GLY H . n B 2 167 SER 167 165 165 SER SER H . n B 2 168 LEU 168 166 166 LEU LEU H . n B 2 169 SER 169 167 167 SER SER H . n B 2 170 SER 170 169 169 SER SER H . n B 2 171 GLY 171 170 170 GLY GLY H . n B 2 172 VAL 172 171 171 VAL VAL H . n B 2 173 HIS 173 172 172 HIS HIS H . n B 2 174 THR 174 173 173 THR THR H . n B 2 175 PHE 175 174 174 PHE PHE H . n B 2 176 PRO 176 175 175 PRO PRO H . n B 2 177 ALA 177 176 176 ALA ALA H . n B 2 178 VAL 178 177 177 VAL VAL H . n B 2 179 LEU 179 180 180 LEU LEU H . n B 2 180 GLN 180 181 181 GLN GLN H . n B 2 181 SER 181 182 182 SER SER H . n B 2 182 ASP 182 183 183 ASP ASP H . n B 2 183 LEU 183 184 184 LEU LEU H . n B 2 184 TYR 184 185 185 TYR TYR H . n B 2 185 THR 185 186 186 THR THR H . n B 2 186 LEU 186 187 187 LEU LEU H . n B 2 187 THR 187 188 188 THR THR H . n B 2 188 SER 188 189 189 SER SER H . n B 2 189 SER 189 190 190 SER SER H . n B 2 190 VAL 190 191 191 VAL VAL H . n B 2 191 THR 191 192 192 THR THR H . n B 2 192 VAL 192 193 193 VAL VAL H . n B 2 193 PRO 193 194 194 PRO PRO H . n B 2 194 SER 194 195 195 SER SER H . n B 2 195 SER 195 196 196 SER SER H . n B 2 196 THR 196 198 198 THR THR H . n B 2 197 TRP 197 199 199 TRP TRP H . n B 2 198 PRO 198 200 200 PRO PRO H . n B 2 199 SER 199 202 202 SER SER H . n B 2 200 GLN 200 203 203 GLN GLN H . n B 2 201 THR 201 204 204 THR THR H . n B 2 202 VAL 202 205 205 VAL VAL H . n B 2 203 THR 203 206 206 THR THR H . n B 2 204 CYS 204 208 208 CYS CYS H . n B 2 205 ASN 205 209 209 ASN ASN H . n B 2 206 VAL 206 210 210 VAL VAL H . n B 2 207 ALA 207 211 211 ALA ALA H . n B 2 208 HIS 208 212 212 HIS HIS H . n B 2 209 PRO 209 213 213 PRO PRO H . n B 2 210 ALA 210 214 214 ALA ALA H . n B 2 211 SER 211 215 215 SER SER H . n B 2 212 SER 212 216 216 SER SER H . n B 2 213 THR 213 217 217 THR THR H . n B 2 214 LYS 214 218 218 LYS LYS H . n B 2 215 VAL 215 219 219 VAL VAL H . n B 2 216 ASP 216 220 220 ASP ASP H . n B 2 217 LYS 217 221 221 LYS LYS H . n B 2 218 LYS 218 222 222 LYS LYS H . n B 2 219 ILE 219 223 223 ILE ILE H . n B 2 220 VAL 220 226 226 VAL VAL H . n B 2 221 PRO 221 227 227 PRO PRO H . n B 2 222 ARG 222 228 228 ARG ARG H . n # _pdbx_nonpoly_scheme.asym_id C _pdbx_nonpoly_scheme.entity_id 3 _pdbx_nonpoly_scheme.mon_id EDO _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 229 _pdbx_nonpoly_scheme.auth_seq_num 1 _pdbx_nonpoly_scheme.pdb_mon_id EDO _pdbx_nonpoly_scheme.auth_mon_id EDO _pdbx_nonpoly_scheme.pdb_strand_id H _pdbx_nonpoly_scheme.pdb_ins_code . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4150 ? 1 MORE -22 ? 1 'SSA (A^2)' 19290 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-05-15 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-08-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Derived calculations' 7 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model 5 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 4 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 5 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.pdbx_refine_id 1 ? refined 0.4187 9.9980 15.9355 -0.2391 0.0926 -0.0774 0.0117 0.0806 0.1077 3.3467 5.8577 3.6793 -1.5429 0.1363 -0.4965 -0.0552 -0.4025 -0.3481 0.0604 0.0899 0.4187 0.1718 -0.1849 -0.0347 'X-RAY DIFFRACTION' 2 ? refined -7.6062 10.6013 -15.0959 -0.1586 -0.0727 -0.0235 0.0461 -0.0359 0.0553 2.5117 3.1706 7.3684 0.2710 0.5411 3.1680 -0.0795 0.0457 -0.1388 0.4307 0.0494 0.3492 0.6115 -0.2845 0.0302 'X-RAY DIFFRACTION' 3 ? refined 13.0932 -5.2739 9.3845 -0.0534 -0.0435 -0.0977 -0.0310 0.0185 0.1456 2.7220 2.9649 5.5828 -1.7225 1.1206 0.5363 0.1576 -0.1933 -0.5400 -0.3031 0.0469 0.2498 0.3100 -0.2704 -0.2045 'X-RAY DIFFRACTION' 4 ? refined 6.6377 10.8423 -23.0710 -0.1800 0.0896 -0.2179 0.0341 -0.0573 -0.1929 4.8911 8.1181 5.9276 -2.0801 0.8131 0.5885 -0.0819 0.0740 0.1500 -0.2550 0.4847 0.1204 -0.0483 0.4336 -0.4027 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 L 1 A 1 L 107 A 110 ? 'X-RAY DIFFRACTION' ? 2 2 L 108 A 111 L 212 A 212 ? 'X-RAY DIFFRACTION' ? 3 3 H 1 B 1 H 113 B 122 ? 'X-RAY DIFFRACTION' ? 4 4 H 114 B 123 H 228 B 222 ? 'X-RAY DIFFRACTION' ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.3.0017 ? 1 HKL-2000 'data collection' . ? 2 HKL-2000 'data reduction' . ? 3 HKL-2000 'data scaling' . ? 4 PHASER phasing . ? 5 # _pdbx_database_remark.id 999 _pdbx_database_remark.text ;SEQUENCE THE SEQUENCES OF THE FAB COMPLEXES ARE NOT YET AVAILABLE IN ANY SEQUENCE DATABASES. THE RESIDUE NUMBERING IN CHAINS L AND H FOLLOWS THE STANDARD KABAT NUMBERING SCHEME ; # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR L 51 ? ? 72.83 -58.07 2 1 ARG L 61 ? ? -27.49 -41.08 3 1 SER L 84 ? ? 179.85 167.15 4 1 ASN L 94 ? ? 95.48 -11.87 5 1 ASP L 151 ? ? 35.35 47.69 6 1 PRO H 14 ? ? -61.52 92.33 7 1 PRO H 41 ? ? -31.61 109.97 8 1 SER H 82 B ? 55.71 76.31 9 1 ASN H 100 ? ? -152.81 0.98 10 1 ASN H 100 A ? -97.96 -62.68 11 1 SER H 112 ? ? -170.73 143.90 12 1 PHE H 148 ? ? -173.57 139.00 13 1 SER H 167 ? ? -121.63 -55.25 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 H ASN 131 ? B ASN 138 2 1 Y 1 H ALA 132 ? B ALA 139 3 1 Y 1 H ALA 133 ? B ALA 140 4 1 Y 1 H SER 134 ? B SER 141 5 1 Y 1 H GLN 135 ? B GLN 142 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 EDO C1 C N N 88 EDO O1 O N N 89 EDO C2 C N N 90 EDO O2 O N N 91 EDO H11 H N N 92 EDO H12 H N N 93 EDO HO1 H N N 94 EDO H21 H N N 95 EDO H22 H N N 96 EDO HO2 H N N 97 GLN N N N N 98 GLN CA C N S 99 GLN C C N N 100 GLN O O N N 101 GLN CB C N N 102 GLN CG C N N 103 GLN CD C N N 104 GLN OE1 O N N 105 GLN NE2 N N N 106 GLN OXT O N N 107 GLN H H N N 108 GLN H2 H N N 109 GLN HA H N N 110 GLN HB2 H N N 111 GLN HB3 H N N 112 GLN HG2 H N N 113 GLN HG3 H N N 114 GLN HE21 H N N 115 GLN HE22 H N N 116 GLN HXT H N N 117 GLU N N N N 118 GLU CA C N S 119 GLU C C N N 120 GLU O O N N 121 GLU CB C N N 122 GLU CG C N N 123 GLU CD C N N 124 GLU OE1 O N N 125 GLU OE2 O N N 126 GLU OXT O N N 127 GLU H H N N 128 GLU H2 H N N 129 GLU HA H N N 130 GLU HB2 H N N 131 GLU HB3 H N N 132 GLU HG2 H N N 133 GLU HG3 H N N 134 GLU HE2 H N N 135 GLU HXT H N N 136 GLY N N N N 137 GLY CA C N N 138 GLY C C N N 139 GLY O O N N 140 GLY OXT O N N 141 GLY H H N N 142 GLY H2 H N N 143 GLY HA2 H N N 144 GLY HA3 H N N 145 GLY HXT H N N 146 HIS N N N N 147 HIS CA C N S 148 HIS C C N N 149 HIS O O N N 150 HIS CB C N N 151 HIS CG C Y N 152 HIS ND1 N Y N 153 HIS CD2 C Y N 154 HIS CE1 C Y N 155 HIS NE2 N Y N 156 HIS OXT O N N 157 HIS H H N N 158 HIS H2 H N N 159 HIS HA H N N 160 HIS HB2 H N N 161 HIS HB3 H N N 162 HIS HD1 H N N 163 HIS HD2 H N N 164 HIS HE1 H N N 165 HIS HE2 H N N 166 HIS HXT H N N 167 ILE N N N N 168 ILE CA C N S 169 ILE C C N N 170 ILE O O N N 171 ILE CB C N S 172 ILE CG1 C N N 173 ILE CG2 C N N 174 ILE CD1 C N N 175 ILE OXT O N N 176 ILE H H N N 177 ILE H2 H N N 178 ILE HA H N N 179 ILE HB H N N 180 ILE HG12 H N N 181 ILE HG13 H N N 182 ILE HG21 H N N 183 ILE HG22 H N N 184 ILE HG23 H N N 185 ILE HD11 H N N 186 ILE HD12 H N N 187 ILE HD13 H N N 188 ILE HXT H N N 189 LEU N N N N 190 LEU CA C N S 191 LEU C C N N 192 LEU O O N N 193 LEU CB C N N 194 LEU CG C N N 195 LEU CD1 C N N 196 LEU CD2 C N N 197 LEU OXT O N N 198 LEU H H N N 199 LEU H2 H N N 200 LEU HA H N N 201 LEU HB2 H N N 202 LEU HB3 H N N 203 LEU HG H N N 204 LEU HD11 H N N 205 LEU HD12 H N N 206 LEU HD13 H N N 207 LEU HD21 H N N 208 LEU HD22 H N N 209 LEU HD23 H N N 210 LEU HXT H N N 211 LYS N N N N 212 LYS CA C N S 213 LYS C C N N 214 LYS O O N N 215 LYS CB C N N 216 LYS CG C N N 217 LYS CD C N N 218 LYS CE C N N 219 LYS NZ N N N 220 LYS OXT O N N 221 LYS H H N N 222 LYS H2 H N N 223 LYS HA H N N 224 LYS HB2 H N N 225 LYS HB3 H N N 226 LYS HG2 H N N 227 LYS HG3 H N N 228 LYS HD2 H N N 229 LYS HD3 H N N 230 LYS HE2 H N N 231 LYS HE3 H N N 232 LYS HZ1 H N N 233 LYS HZ2 H N N 234 LYS HZ3 H N N 235 LYS HXT H N N 236 MET N N N N 237 MET CA C N S 238 MET C C N N 239 MET O O N N 240 MET CB C N N 241 MET CG C N N 242 MET SD S N N 243 MET CE C N N 244 MET OXT O N N 245 MET H H N N 246 MET H2 H N N 247 MET HA H N N 248 MET HB2 H N N 249 MET HB3 H N N 250 MET HG2 H N N 251 MET HG3 H N N 252 MET HE1 H N N 253 MET HE2 H N N 254 MET HE3 H N N 255 MET HXT H N N 256 PHE N N N N 257 PHE CA C N S 258 PHE C C N N 259 PHE O O N N 260 PHE CB C N N 261 PHE CG C Y N 262 PHE CD1 C Y N 263 PHE CD2 C Y N 264 PHE CE1 C Y N 265 PHE CE2 C Y N 266 PHE CZ C Y N 267 PHE OXT O N N 268 PHE H H N N 269 PHE H2 H N N 270 PHE HA H N N 271 PHE HB2 H N N 272 PHE HB3 H N N 273 PHE HD1 H N N 274 PHE HD2 H N N 275 PHE HE1 H N N 276 PHE HE2 H N N 277 PHE HZ H N N 278 PHE HXT H N N 279 PRO N N N N 280 PRO CA C N S 281 PRO C C N N 282 PRO O O N N 283 PRO CB C N N 284 PRO CG C N N 285 PRO CD C N N 286 PRO OXT O N N 287 PRO H H N N 288 PRO HA H N N 289 PRO HB2 H N N 290 PRO HB3 H N N 291 PRO HG2 H N N 292 PRO HG3 H N N 293 PRO HD2 H N N 294 PRO HD3 H N N 295 PRO HXT H N N 296 SER N N N N 297 SER CA C N S 298 SER C C N N 299 SER O O N N 300 SER CB C N N 301 SER OG O N N 302 SER OXT O N N 303 SER H H N N 304 SER H2 H N N 305 SER HA H N N 306 SER HB2 H N N 307 SER HB3 H N N 308 SER HG H N N 309 SER HXT H N N 310 THR N N N N 311 THR CA C N S 312 THR C C N N 313 THR O O N N 314 THR CB C N R 315 THR OG1 O N N 316 THR CG2 C N N 317 THR OXT O N N 318 THR H H N N 319 THR H2 H N N 320 THR HA H N N 321 THR HB H N N 322 THR HG1 H N N 323 THR HG21 H N N 324 THR HG22 H N N 325 THR HG23 H N N 326 THR HXT H N N 327 TRP N N N N 328 TRP CA C N S 329 TRP C C N N 330 TRP O O N N 331 TRP CB C N N 332 TRP CG C Y N 333 TRP CD1 C Y N 334 TRP CD2 C Y N 335 TRP NE1 N Y N 336 TRP CE2 C Y N 337 TRP CE3 C Y N 338 TRP CZ2 C Y N 339 TRP CZ3 C Y N 340 TRP CH2 C Y N 341 TRP OXT O N N 342 TRP H H N N 343 TRP H2 H N N 344 TRP HA H N N 345 TRP HB2 H N N 346 TRP HB3 H N N 347 TRP HD1 H N N 348 TRP HE1 H N N 349 TRP HE3 H N N 350 TRP HZ2 H N N 351 TRP HZ3 H N N 352 TRP HH2 H N N 353 TRP HXT H N N 354 TYR N N N N 355 TYR CA C N S 356 TYR C C N N 357 TYR O O N N 358 TYR CB C N N 359 TYR CG C Y N 360 TYR CD1 C Y N 361 TYR CD2 C Y N 362 TYR CE1 C Y N 363 TYR CE2 C Y N 364 TYR CZ C Y N 365 TYR OH O N N 366 TYR OXT O N N 367 TYR H H N N 368 TYR H2 H N N 369 TYR HA H N N 370 TYR HB2 H N N 371 TYR HB3 H N N 372 TYR HD1 H N N 373 TYR HD2 H N N 374 TYR HE1 H N N 375 TYR HE2 H N N 376 TYR HH H N N 377 TYR HXT H N N 378 VAL N N N N 379 VAL CA C N S 380 VAL C C N N 381 VAL O O N N 382 VAL CB C N N 383 VAL CG1 C N N 384 VAL CG2 C N N 385 VAL OXT O N N 386 VAL H H N N 387 VAL H2 H N N 388 VAL HA H N N 389 VAL HB H N N 390 VAL HG11 H N N 391 VAL HG12 H N N 392 VAL HG13 H N N 393 VAL HG21 H N N 394 VAL HG22 H N N 395 VAL HG23 H N N 396 VAL HXT H N N 397 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 EDO C1 O1 sing N N 83 EDO C1 C2 sing N N 84 EDO C1 H11 sing N N 85 EDO C1 H12 sing N N 86 EDO O1 HO1 sing N N 87 EDO C2 O2 sing N N 88 EDO C2 H21 sing N N 89 EDO C2 H22 sing N N 90 EDO O2 HO2 sing N N 91 GLN N CA sing N N 92 GLN N H sing N N 93 GLN N H2 sing N N 94 GLN CA C sing N N 95 GLN CA CB sing N N 96 GLN CA HA sing N N 97 GLN C O doub N N 98 GLN C OXT sing N N 99 GLN CB CG sing N N 100 GLN CB HB2 sing N N 101 GLN CB HB3 sing N N 102 GLN CG CD sing N N 103 GLN CG HG2 sing N N 104 GLN CG HG3 sing N N 105 GLN CD OE1 doub N N 106 GLN CD NE2 sing N N 107 GLN NE2 HE21 sing N N 108 GLN NE2 HE22 sing N N 109 GLN OXT HXT sing N N 110 GLU N CA sing N N 111 GLU N H sing N N 112 GLU N H2 sing N N 113 GLU CA C sing N N 114 GLU CA CB sing N N 115 GLU CA HA sing N N 116 GLU C O doub N N 117 GLU C OXT sing N N 118 GLU CB CG sing N N 119 GLU CB HB2 sing N N 120 GLU CB HB3 sing N N 121 GLU CG CD sing N N 122 GLU CG HG2 sing N N 123 GLU CG HG3 sing N N 124 GLU CD OE1 doub N N 125 GLU CD OE2 sing N N 126 GLU OE2 HE2 sing N N 127 GLU OXT HXT sing N N 128 GLY N CA sing N N 129 GLY N H sing N N 130 GLY N H2 sing N N 131 GLY CA C sing N N 132 GLY CA HA2 sing N N 133 GLY CA HA3 sing N N 134 GLY C O doub N N 135 GLY C OXT sing N N 136 GLY OXT HXT sing N N 137 HIS N CA sing N N 138 HIS N H sing N N 139 HIS N H2 sing N N 140 HIS CA C sing N N 141 HIS CA CB sing N N 142 HIS CA HA sing N N 143 HIS C O doub N N 144 HIS C OXT sing N N 145 HIS CB CG sing N N 146 HIS CB HB2 sing N N 147 HIS CB HB3 sing N N 148 HIS CG ND1 sing Y N 149 HIS CG CD2 doub Y N 150 HIS ND1 CE1 doub Y N 151 HIS ND1 HD1 sing N N 152 HIS CD2 NE2 sing Y N 153 HIS CD2 HD2 sing N N 154 HIS CE1 NE2 sing Y N 155 HIS CE1 HE1 sing N N 156 HIS NE2 HE2 sing N N 157 HIS OXT HXT sing N N 158 ILE N CA sing N N 159 ILE N H sing N N 160 ILE N H2 sing N N 161 ILE CA C sing N N 162 ILE CA CB sing N N 163 ILE CA HA sing N N 164 ILE C O doub N N 165 ILE C OXT sing N N 166 ILE CB CG1 sing N N 167 ILE CB CG2 sing N N 168 ILE CB HB sing N N 169 ILE CG1 CD1 sing N N 170 ILE CG1 HG12 sing N N 171 ILE CG1 HG13 sing N N 172 ILE CG2 HG21 sing N N 173 ILE CG2 HG22 sing N N 174 ILE CG2 HG23 sing N N 175 ILE CD1 HD11 sing N N 176 ILE CD1 HD12 sing N N 177 ILE CD1 HD13 sing N N 178 ILE OXT HXT sing N N 179 LEU N CA sing N N 180 LEU N H sing N N 181 LEU N H2 sing N N 182 LEU CA C sing N N 183 LEU CA CB sing N N 184 LEU CA HA sing N N 185 LEU C O doub N N 186 LEU C OXT sing N N 187 LEU CB CG sing N N 188 LEU CB HB2 sing N N 189 LEU CB HB3 sing N N 190 LEU CG CD1 sing N N 191 LEU CG CD2 sing N N 192 LEU CG HG sing N N 193 LEU CD1 HD11 sing N N 194 LEU CD1 HD12 sing N N 195 LEU CD1 HD13 sing N N 196 LEU CD2 HD21 sing N N 197 LEU CD2 HD22 sing N N 198 LEU CD2 HD23 sing N N 199 LEU OXT HXT sing N N 200 LYS N CA sing N N 201 LYS N H sing N N 202 LYS N H2 sing N N 203 LYS CA C sing N N 204 LYS CA CB sing N N 205 LYS CA HA sing N N 206 LYS C O doub N N 207 LYS C OXT sing N N 208 LYS CB CG sing N N 209 LYS CB HB2 sing N N 210 LYS CB HB3 sing N N 211 LYS CG CD sing N N 212 LYS CG HG2 sing N N 213 LYS CG HG3 sing N N 214 LYS CD CE sing N N 215 LYS CD HD2 sing N N 216 LYS CD HD3 sing N N 217 LYS CE NZ sing N N 218 LYS CE HE2 sing N N 219 LYS CE HE3 sing N N 220 LYS NZ HZ1 sing N N 221 LYS NZ HZ2 sing N N 222 LYS NZ HZ3 sing N N 223 LYS OXT HXT sing N N 224 MET N CA sing N N 225 MET N H sing N N 226 MET N H2 sing N N 227 MET CA C sing N N 228 MET CA CB sing N N 229 MET CA HA sing N N 230 MET C O doub N N 231 MET C OXT sing N N 232 MET CB CG sing N N 233 MET CB HB2 sing N N 234 MET CB HB3 sing N N 235 MET CG SD sing N N 236 MET CG HG2 sing N N 237 MET CG HG3 sing N N 238 MET SD CE sing N N 239 MET CE HE1 sing N N 240 MET CE HE2 sing N N 241 MET CE HE3 sing N N 242 MET OXT HXT sing N N 243 PHE N CA sing N N 244 PHE N H sing N N 245 PHE N H2 sing N N 246 PHE CA C sing N N 247 PHE CA CB sing N N 248 PHE CA HA sing N N 249 PHE C O doub N N 250 PHE C OXT sing N N 251 PHE CB CG sing N N 252 PHE CB HB2 sing N N 253 PHE CB HB3 sing N N 254 PHE CG CD1 doub Y N 255 PHE CG CD2 sing Y N 256 PHE CD1 CE1 sing Y N 257 PHE CD1 HD1 sing N N 258 PHE CD2 CE2 doub Y N 259 PHE CD2 HD2 sing N N 260 PHE CE1 CZ doub Y N 261 PHE CE1 HE1 sing N N 262 PHE CE2 CZ sing Y N 263 PHE CE2 HE2 sing N N 264 PHE CZ HZ sing N N 265 PHE OXT HXT sing N N 266 PRO N CA sing N N 267 PRO N CD sing N N 268 PRO N H sing N N 269 PRO CA C sing N N 270 PRO CA CB sing N N 271 PRO CA HA sing N N 272 PRO C O doub N N 273 PRO C OXT sing N N 274 PRO CB CG sing N N 275 PRO CB HB2 sing N N 276 PRO CB HB3 sing N N 277 PRO CG CD sing N N 278 PRO CG HG2 sing N N 279 PRO CG HG3 sing N N 280 PRO CD HD2 sing N N 281 PRO CD HD3 sing N N 282 PRO OXT HXT sing N N 283 SER N CA sing N N 284 SER N H sing N N 285 SER N H2 sing N N 286 SER CA C sing N N 287 SER CA CB sing N N 288 SER CA HA sing N N 289 SER C O doub N N 290 SER C OXT sing N N 291 SER CB OG sing N N 292 SER CB HB2 sing N N 293 SER CB HB3 sing N N 294 SER OG HG sing N N 295 SER OXT HXT sing N N 296 THR N CA sing N N 297 THR N H sing N N 298 THR N H2 sing N N 299 THR CA C sing N N 300 THR CA CB sing N N 301 THR CA HA sing N N 302 THR C O doub N N 303 THR C OXT sing N N 304 THR CB OG1 sing N N 305 THR CB CG2 sing N N 306 THR CB HB sing N N 307 THR OG1 HG1 sing N N 308 THR CG2 HG21 sing N N 309 THR CG2 HG22 sing N N 310 THR CG2 HG23 sing N N 311 THR OXT HXT sing N N 312 TRP N CA sing N N 313 TRP N H sing N N 314 TRP N H2 sing N N 315 TRP CA C sing N N 316 TRP CA CB sing N N 317 TRP CA HA sing N N 318 TRP C O doub N N 319 TRP C OXT sing N N 320 TRP CB CG sing N N 321 TRP CB HB2 sing N N 322 TRP CB HB3 sing N N 323 TRP CG CD1 doub Y N 324 TRP CG CD2 sing Y N 325 TRP CD1 NE1 sing Y N 326 TRP CD1 HD1 sing N N 327 TRP CD2 CE2 doub Y N 328 TRP CD2 CE3 sing Y N 329 TRP NE1 CE2 sing Y N 330 TRP NE1 HE1 sing N N 331 TRP CE2 CZ2 sing Y N 332 TRP CE3 CZ3 doub Y N 333 TRP CE3 HE3 sing N N 334 TRP CZ2 CH2 doub Y N 335 TRP CZ2 HZ2 sing N N 336 TRP CZ3 CH2 sing Y N 337 TRP CZ3 HZ3 sing N N 338 TRP CH2 HH2 sing N N 339 TRP OXT HXT sing N N 340 TYR N CA sing N N 341 TYR N H sing N N 342 TYR N H2 sing N N 343 TYR CA C sing N N 344 TYR CA CB sing N N 345 TYR CA HA sing N N 346 TYR C O doub N N 347 TYR C OXT sing N N 348 TYR CB CG sing N N 349 TYR CB HB2 sing N N 350 TYR CB HB3 sing N N 351 TYR CG CD1 doub Y N 352 TYR CG CD2 sing Y N 353 TYR CD1 CE1 sing Y N 354 TYR CD1 HD1 sing N N 355 TYR CD2 CE2 doub Y N 356 TYR CD2 HD2 sing N N 357 TYR CE1 CZ doub Y N 358 TYR CE1 HE1 sing N N 359 TYR CE2 CZ sing Y N 360 TYR CE2 HE2 sing N N 361 TYR CZ OH sing N N 362 TYR OH HH sing N N 363 TYR OXT HXT sing N N 364 VAL N CA sing N N 365 VAL N H sing N N 366 VAL N H2 sing N N 367 VAL CA C sing N N 368 VAL CA CB sing N N 369 VAL CA HA sing N N 370 VAL C O doub N N 371 VAL C OXT sing N N 372 VAL CB CG1 sing N N 373 VAL CB CG2 sing N N 374 VAL CB HB sing N N 375 VAL CG1 HG11 sing N N 376 VAL CG1 HG12 sing N N 377 VAL CG1 HG13 sing N N 378 VAL CG2 HG21 sing N N 379 VAL CG2 HG22 sing N N 380 VAL CG2 HG23 sing N N 381 VAL OXT HXT sing N N 382 # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name 1,2-ETHANEDIOL _pdbx_entity_nonpoly.comp_id EDO # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2NTF _pdbx_initial_refinement_model.details 'PDB entry 2NTF' #