HEADER HYDROLASE 31-JAN-07 2OQA TITLE X-RAY SEQUENCE AND CRYSTAL STRUCTURE OF LUFFACULIN 1, A NOVEL TYPE 1 TITLE 2 RIBOSOME-INACTIVATING PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: LUFFACULIN 1; COMPND 3 CHAIN: A, B SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LUFFA ACUTANGULA; SOURCE 3 ORGANISM_TAXID: 56866; SOURCE 4 TISSUE: SEED KEYWDS MIXED ALPHA HELIX AND BETA SHEET, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR X.HOU,M.HUANG REVDAT 6 03-APR-24 2OQA 1 REMARK REVDAT 5 27-DEC-23 2OQA 1 HETSYN REVDAT 4 29-JUL-20 2OQA 1 COMPND REMARK HETNAM LINK REVDAT 4 2 1 SITE REVDAT 3 13-JUL-11 2OQA 1 VERSN REVDAT 2 24-FEB-09 2OQA 1 VERSN REVDAT 1 29-MAY-07 2OQA 0 JRNL AUTH X.HOU,M.CHEN,L.CHEN,E.J.MEEHAN,J.XIE,M.HUANG JRNL TITL X-RAY SEQUENCE AND CRYSTAL STRUCTURE OF LUFFACULIN 1, A JRNL TITL 2 NOVEL TYPE 1 RIBOSOME-INACTIVATING PROTEIN JRNL REF BMC STRUCT.BIOL. V. 7 29 2007 JRNL REFN ESSN 1472-6807 JRNL PMID 17470286 JRNL DOI 10.1186/1472-6807-7-29 REMARK 2 REMARK 2 RESOLUTION. 1.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.90 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 86.7 REMARK 3 NUMBER OF REFLECTIONS : 94795 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.213 REMARK 3 R VALUE (WORKING SET) : 0.213 REMARK 3 FREE R VALUE : 0.232 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4750 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.45 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4526 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 86.70 REMARK 3 BIN R VALUE (WORKING SET) : 0.2500 REMARK 3 BIN FREE R VALUE SET COUNT : 4750 REMARK 3 BIN FREE R VALUE : 0.2750 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3600 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 87 REMARK 3 SOLVENT ATOMS : 490 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 18.96 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.96 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.69000 REMARK 3 B22 (A**2) : 1.67000 REMARK 3 B33 (A**2) : -0.84000 REMARK 3 B12 (A**2) : -0.42000 REMARK 3 B13 (A**2) : 0.46000 REMARK 3 B23 (A**2) : -1.05000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.073 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.071 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.043 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.062 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.944 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.936 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3750 ; 0.007 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5076 ; 1.153 ; 1.987 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 470 ; 4.628 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 134 ;37.287 ;24.627 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 629 ;11.308 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;20.006 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 622 ; 0.077 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2672 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1852 ; 0.214 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2685 ; 0.307 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 371 ; 0.133 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 30 ; 0.153 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 28 ; 0.101 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2407 ; 0.577 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3799 ; 0.965 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1505 ; 1.554 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1277 ; 2.346 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2OQA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 06-FEB-07. REMARK 100 THE DEPOSITION ID IS D_1000041454. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-MAY-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.05 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 130 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 94795 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.400 REMARK 200 RESOLUTION RANGE LOW (A) : 33.900 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 86.7 REMARK 200 DATA REDUNDANCY : 1.900 REMARK 200 R MERGE (I) : 0.03000 REMARK 200 R SYM (I) : 0.11500 REMARK 200 FOR THE DATA SET : 21.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.44 REMARK 200 COMPLETENESS FOR SHELL (%) : 62.0 REMARK 200 DATA REDUNDANCY IN SHELL : 1.70 REMARK 200 R MERGE FOR SHELL (I) : 0.03000 REMARK 200 R SYM FOR SHELL (I) : 0.11500 REMARK 200 FOR SHELL : 4.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: A HOMOLOGY MODEL BUILT BASED ON THE SEQUENCE REMARK 200 LUFFIN A REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.54 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.77 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 28% (W/V) PEG 6000, 0.1M CITRATE REMARK 280 BUFFER(CONTAINING 0.02% (W/V) SODIUM AZIDE)', PH 4.5, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASN B 28 REMARK 465 GLY B 206 REMARK 465 MET B 215 REMARK 465 ASP B 216 REMARK 465 ALA B 217 REMARK 465 GLY B 218 REMARK 465 GLY B 219 REMARK 465 GLN B 220 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 386 O HOH A 677 1.88 REMARK 500 CG ASN B 84 O1 NAG B 1003 2.06 REMARK 500 ND2 ASN B 77 C1 NAG B 1002 2.09 REMARK 500 ND2 ASN A 77 O1 NAG A 1001 2.10 REMARK 500 OD1 ASN A 77 O1 NAG A 1001 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 77 -118.69 55.41 REMARK 500 TYR A 141 75.09 35.29 REMARK 500 THR A 157 -72.11 -119.56 REMARK 500 LYS A 234 43.53 -147.23 REMARK 500 ASN A 235 -71.27 -151.82 REMARK 500 ASN B 77 -118.30 53.99 REMARK 500 TYR B 141 62.64 34.62 REMARK 500 THR B 157 -73.13 -120.51 REMARK 500 LYS B 234 32.69 -140.88 REMARK 500 ASN B 235 -72.46 -148.31 REMARK 500 REMARK 500 REMARK: NULL DBREF 2OQA A 1 241 PDB 2OQA 2OQA 1 241 DBREF 2OQA B 1 241 PDB 2OQA 2OQA 1 241 SEQRES 1 A 241 ASP VAL SER PHE SER LEU SER GLY SER SER SER THR SER SEQRES 2 A 241 TYR SER LYS PHE ILE GLY ALA LEU ARG LYS ALA LEU PRO SEQRES 3 A 241 SER ASN GLY THR VAL TYR ASN ILE THR LEU LEU LEU SER SEQRES 4 A 241 SER ALA SER GLY ALA SER ARG TYR THR LEU MET LYS LEU SEQRES 5 A 241 SER ASN TYR ASP GLY LYS ALA ILE THR VAL ALA ILE ASP SEQRES 6 A 241 VAL THR ASN VAL TYR ILE MET GLY TYR LEU VAL ASN SER SEQRES 7 A 241 THR SER TYR PHE PHE ASN GLU SER ASP ALA LYS LEU ALA SEQRES 8 A 241 SER GLN TYR VAL PHE ALA GLY SER THR ILE VAL THR LEU SEQRES 9 A 241 PRO TYR SER GLY ASN TYR GLU LYS LEU GLN THR ALA ALA SEQRES 10 A 241 GLY LYS ILE ARG GLU LYS ILE PRO LEU GLY PHE PRO ALA SEQRES 11 A 241 LEU ASP SER ALA ILE THR THR LEU PHE HIS TYR ASP SER SEQRES 12 A 241 THR ALA ALA ALA ALA ALA PHE LEU VAL ILE ILE GLN THR SEQRES 13 A 241 THR ALA GLU SER SER ARG PHE LYS TYR ILE GLU GLY GLN SEQRES 14 A 241 ILE ILE MET ARG ILE SER LYS ASN GLY VAL PRO SER LEU SEQRES 15 A 241 ALA THR ILE SER LEU GLU ASN GLU TRP SER ALA LEU SER SEQRES 16 A 241 LYS GLN ILE GLN LEU ALA GLN THR ASN ASN GLY THR PHE SEQRES 17 A 241 LYS THR PRO VAL VAL ILE MET ASP ALA GLY GLY GLN ARG SEQRES 18 A 241 VAL GLU ILE GLY ASN VAL GLY SER LYS VAL VAL THR LYS SEQRES 19 A 241 ASN ILE GLN LEU LEU LEU ASN SEQRES 1 B 241 ASP VAL SER PHE SER LEU SER GLY SER SER SER THR SER SEQRES 2 B 241 TYR SER LYS PHE ILE GLY ALA LEU ARG LYS ALA LEU PRO SEQRES 3 B 241 SER ASN GLY THR VAL TYR ASN ILE THR LEU LEU LEU SER SEQRES 4 B 241 SER ALA SER GLY ALA SER ARG TYR THR LEU MET LYS LEU SEQRES 5 B 241 SER ASN TYR ASP GLY LYS ALA ILE THR VAL ALA ILE ASP SEQRES 6 B 241 VAL THR ASN VAL TYR ILE MET GLY TYR LEU VAL ASN SER SEQRES 7 B 241 THR SER TYR PHE PHE ASN GLU SER ASP ALA LYS LEU ALA SEQRES 8 B 241 SER GLN TYR VAL PHE ALA GLY SER THR ILE VAL THR LEU SEQRES 9 B 241 PRO TYR SER GLY ASN TYR GLU LYS LEU GLN THR ALA ALA SEQRES 10 B 241 GLY LYS ILE ARG GLU LYS ILE PRO LEU GLY PHE PRO ALA SEQRES 11 B 241 LEU ASP SER ALA ILE THR THR LEU PHE HIS TYR ASP SER SEQRES 12 B 241 THR ALA ALA ALA ALA ALA PHE LEU VAL ILE ILE GLN THR SEQRES 13 B 241 THR ALA GLU SER SER ARG PHE LYS TYR ILE GLU GLY GLN SEQRES 14 B 241 ILE ILE MET ARG ILE SER LYS ASN GLY VAL PRO SER LEU SEQRES 15 B 241 ALA THR ILE SER LEU GLU ASN GLU TRP SER ALA LEU SER SEQRES 16 B 241 LYS GLN ILE GLN LEU ALA GLN THR ASN ASN GLY THR PHE SEQRES 17 B 241 LYS THR PRO VAL VAL ILE MET ASP ALA GLY GLY GLN ARG SEQRES 18 B 241 VAL GLU ILE GLY ASN VAL GLY SER LYS VAL VAL THR LYS SEQRES 19 B 241 ASN ILE GLN LEU LEU LEU ASN MODRES 2OQA ASN B 84 ASN GLYCOSYLATION SITE HET NAG A1001 15 HET NAG A1004 15 HET PG4 A 801 13 HET NAG B1002 15 HET NAG B1003 15 HET PEG B 802 7 HET PEG B 803 7 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM PG4 TETRAETHYLENE GLYCOL HETNAM PEG DI(HYDROXYETHYL)ETHER HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 3 NAG 4(C8 H15 N O6) FORMUL 5 PG4 C8 H18 O5 FORMUL 8 PEG 2(C4 H10 O3) FORMUL 10 HOH *490(H2 O) HELIX 1 1 SER A 10 LEU A 25 1 16 HELIX 2 2 SER A 42 SER A 45 5 4 HELIX 3 3 GLU A 85 SER A 92 1 8 HELIX 4 4 ASN A 109 GLY A 118 1 10 HELIX 5 5 ILE A 120 ILE A 124 5 5 HELIX 6 6 GLY A 127 HIS A 140 1 14 HELIX 7 7 ALA A 145 THR A 157 1 13 HELIX 8 8 THR A 157 PHE A 163 1 7 HELIX 9 9 PHE A 163 ARG A 173 1 11 HELIX 10 10 SER A 181 GLN A 202 1 22 HELIX 11 11 SER A 229 LYS A 234 1 6 HELIX 12 12 SER B 10 LEU B 25 1 16 HELIX 13 13 SER B 42 SER B 45 5 4 HELIX 14 14 GLU B 85 SER B 92 1 8 HELIX 15 15 ASN B 109 GLY B 118 1 10 HELIX 16 16 ILE B 120 ILE B 124 5 5 HELIX 17 17 GLY B 127 HIS B 140 1 14 HELIX 18 18 ALA B 145 THR B 157 1 13 HELIX 19 19 THR B 157 PHE B 163 1 7 HELIX 20 20 PHE B 163 ARG B 173 1 11 HELIX 21 21 SER B 181 GLN B 202 1 22 HELIX 22 22 SER B 229 LYS B 234 1 6 SHEET 1 A 6 VAL A 2 SER A 5 0 SHEET 2 A 6 TYR A 47 SER A 53 1 O LYS A 51 N VAL A 2 SHEET 3 A 6 ALA A 59 ASP A 65 -1 O VAL A 62 N MET A 50 SHEET 4 A 6 ILE A 71 VAL A 76 -1 O MET A 72 N ALA A 63 SHEET 5 A 6 THR A 79 PHE A 82 -1 O THR A 79 N VAL A 76 SHEET 6 A 6 THR A 100 THR A 103 1 O VAL A 102 N SER A 80 SHEET 1 B 3 SER A 27 VAL A 31 0 SHEET 2 B 3 ILE A 34 LEU A 37 -1 O LEU A 36 N GLY A 29 SHEET 3 B 3 LEU A 238 LEU A 239 1 O LEU A 239 N LEU A 37 SHEET 1 C 2 THR A 207 MET A 215 0 SHEET 2 C 2 ARG A 221 ASN A 226 -1 O ILE A 224 N VAL A 212 SHEET 1 D 6 VAL B 2 SER B 5 0 SHEET 2 D 6 TYR B 47 SER B 53 1 O LYS B 51 N VAL B 2 SHEET 3 D 6 ALA B 59 ASP B 65 -1 O VAL B 62 N MET B 50 SHEET 4 D 6 ILE B 71 VAL B 76 -1 O MET B 72 N ALA B 63 SHEET 5 D 6 THR B 79 PHE B 82 -1 O TYR B 81 N TYR B 74 SHEET 6 D 6 THR B 100 THR B 103 1 O VAL B 102 N SER B 80 SHEET 1 E 3 THR B 30 VAL B 31 0 SHEET 2 E 3 ILE B 34 LEU B 36 -1 O ILE B 34 N VAL B 31 SHEET 3 E 3 LEU B 238 LEU B 239 1 O LEU B 239 N THR B 35 SHEET 1 F 2 VAL B 212 VAL B 213 0 SHEET 2 F 2 GLU B 223 ILE B 224 -1 O ILE B 224 N VAL B 212 LINK ND2 ASN B 84 O1 NAG B1003 1555 1555 2.00 CRYST1 39.135 46.813 83.571 89.07 80.01 72.14 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.025553 -0.008232 -0.004830 0.00000 SCALE2 0.000000 0.022443 0.000885 0.00000 SCALE3 0.000000 0.000000 0.012160 0.00000