data_2OSD # _entry.id 2OSD # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2OSD pdb_00002osd 10.2210/pdb2osd/pdb RCSB RCSB041526 ? ? WWPDB D_1000041526 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type TargetDB 373077 . unspecified PDB 2OSO ;Crystal structure of Methanocaldococcus jannaschii DSM 2661 complete genome (1592102) from Methanococcus jannaschii at 1.90 A resolution ; unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 2OSD _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2007-02-05 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of hypothetical protein MJ_1460 (1592102) from Methanococcus jannaschii at 2.30 A resolution' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 2OSD _cell.length_a 55.786 _cell.length_b 55.786 _cell.length_c 118.990 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2OSD _symmetry.Int_Tables_number 96 _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Hypothetical protein MJ1460' 19201.564 1 ? 'K132Y, K133Y, K134Y' 'V4R domain' ? 2 non-polymer syn 'CALCIUM ION' 40.078 2 ? ? ? ? 3 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 4 non-polymer syn 'ZINC ION' 65.409 1 ? ? ? ? 5 non-polymer syn 1,2-ETHANEDIOL 62.068 3 ? ? ? ? 6 water nat water 18.015 30 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;G(MSE)AF(MSE)EKIFPDILEAIRNEEIIKESKKIP(MSE)PYFGLFALVIFDKVKELGSETSLYEIGEEFGK(MSE)L SPKNIEELKKIFKL(MSE)NFGDLEIDENKILLKNPPYKIKLSNPPYQWVSKEEPIHDFIAGILAGCLEEIFYYYFVVNE VECVSQGKDKCVFEVKEVDELNK ; _entity_poly.pdbx_seq_one_letter_code_can ;GMAFMEKIFPDILEAIRNEEIIKESKKIPMPYFGLFALVIFDKVKELGSETSLYEIGEEFGKMLSPKNIEELKKIFKLMN FGDLEIDENKILLKNPPYKIKLSNPPYQWVSKEEPIHDFIAGILAGCLEEIFYYYFVVNEVECVSQGKDKCVFEVKEVDE LNK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier 373077 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 MSE n 1 3 ALA n 1 4 PHE n 1 5 MSE n 1 6 GLU n 1 7 LYS n 1 8 ILE n 1 9 PHE n 1 10 PRO n 1 11 ASP n 1 12 ILE n 1 13 LEU n 1 14 GLU n 1 15 ALA n 1 16 ILE n 1 17 ARG n 1 18 ASN n 1 19 GLU n 1 20 GLU n 1 21 ILE n 1 22 ILE n 1 23 LYS n 1 24 GLU n 1 25 SER n 1 26 LYS n 1 27 LYS n 1 28 ILE n 1 29 PRO n 1 30 MSE n 1 31 PRO n 1 32 TYR n 1 33 PHE n 1 34 GLY n 1 35 LEU n 1 36 PHE n 1 37 ALA n 1 38 LEU n 1 39 VAL n 1 40 ILE n 1 41 PHE n 1 42 ASP n 1 43 LYS n 1 44 VAL n 1 45 LYS n 1 46 GLU n 1 47 LEU n 1 48 GLY n 1 49 SER n 1 50 GLU n 1 51 THR n 1 52 SER n 1 53 LEU n 1 54 TYR n 1 55 GLU n 1 56 ILE n 1 57 GLY n 1 58 GLU n 1 59 GLU n 1 60 PHE n 1 61 GLY n 1 62 LYS n 1 63 MSE n 1 64 LEU n 1 65 SER n 1 66 PRO n 1 67 LYS n 1 68 ASN n 1 69 ILE n 1 70 GLU n 1 71 GLU n 1 72 LEU n 1 73 LYS n 1 74 LYS n 1 75 ILE n 1 76 PHE n 1 77 LYS n 1 78 LEU n 1 79 MSE n 1 80 ASN n 1 81 PHE n 1 82 GLY n 1 83 ASP n 1 84 LEU n 1 85 GLU n 1 86 ILE n 1 87 ASP n 1 88 GLU n 1 89 ASN n 1 90 LYS n 1 91 ILE n 1 92 LEU n 1 93 LEU n 1 94 LYS n 1 95 ASN n 1 96 PRO n 1 97 PRO n 1 98 TYR n 1 99 LYS n 1 100 ILE n 1 101 LYS n 1 102 LEU n 1 103 SER n 1 104 ASN n 1 105 PRO n 1 106 PRO n 1 107 TYR n 1 108 GLN n 1 109 TRP n 1 110 VAL n 1 111 SER n 1 112 LYS n 1 113 GLU n 1 114 GLU n 1 115 PRO n 1 116 ILE n 1 117 HIS n 1 118 ASP n 1 119 PHE n 1 120 ILE n 1 121 ALA n 1 122 GLY n 1 123 ILE n 1 124 LEU n 1 125 ALA n 1 126 GLY n 1 127 CYS n 1 128 LEU n 1 129 GLU n 1 130 GLU n 1 131 ILE n 1 132 PHE n 1 133 TYR n 1 134 TYR n 1 135 TYR n 1 136 PHE n 1 137 VAL n 1 138 VAL n 1 139 ASN n 1 140 GLU n 1 141 VAL n 1 142 GLU n 1 143 CYS n 1 144 VAL n 1 145 SER n 1 146 GLN n 1 147 GLY n 1 148 LYS n 1 149 ASP n 1 150 LYS n 1 151 CYS n 1 152 VAL n 1 153 PHE n 1 154 GLU n 1 155 VAL n 1 156 LYS n 1 157 GLU n 1 158 VAL n 1 159 ASP n 1 160 GLU n 1 161 LEU n 1 162 ASN n 1 163 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Methanocaldococcus _entity_src_gen.pdbx_gene_src_gene '1592102, MJ1460' _entity_src_gen.gene_src_species 'Methanocaldococcus jannaschii' _entity_src_gen.gene_src_strain 'DSM 2661, JAL-1, JCM 10045, NBRC 100440' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Methanocaldococcus jannaschii DSM 2661' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 243232 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc 43067 _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain HK100 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name speedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Y1460_METJA _struct_ref.pdbx_db_accession Q58855 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MAFMEKIFPDILEAIRNEEIIKESKKIPMPYFGLFALVIFDKVKELGSETSLYEIGEEFGKMLSPKNIEELKKIFKLMNF GDLEIDENKILLKNPPYKIKLSNPPYQWVSKEEPIHDFIAGILAGCLEEIFKKKFVVNEVECVSQGKDKCVFEVKEVDEL NK ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2OSD _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 163 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q58855 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 162 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 162 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2OSD GLY A 1 ? UNP Q58855 ? ? 'expression tag' 0 1 1 2OSD MSE A 2 ? UNP Q58855 MET 1 'modified residue' 1 2 1 2OSD MSE A 5 ? UNP Q58855 MET 4 'modified residue' 4 3 1 2OSD MSE A 30 ? UNP Q58855 MET 29 'modified residue' 29 4 1 2OSD MSE A 63 ? UNP Q58855 MET 62 'modified residue' 62 5 1 2OSD MSE A 79 ? UNP Q58855 MET 78 'modified residue' 78 6 1 2OSD TYR A 133 ? UNP Q58855 LYS 132 'engineered mutation' 132 7 1 2OSD TYR A 134 ? UNP Q58855 LYS 133 'engineered mutation' 133 8 1 2OSD TYR A 135 ? UNP Q58855 LYS 134 'engineered mutation' 134 9 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 2OSD # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.41 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 48.95 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 5.1 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details 'NANODROP, 0.2M CaCl2, 20.0% PEG 3350, No Buffer, pH 5.1, VAPOR DIFFUSION, SITTING DROP, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.details 'Flat mirror (vertical focusing)' _diffrn_detector.pdbx_collection_date 2007-01-07 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Single crystal Si(111) bent (horizontal focusing)' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.91837 1.0 2 0.97879 1.0 3 0.97908 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL11-1 _diffrn_source.type 'SSRL BEAMLINE BL11-1' _diffrn_source.pdbx_wavelength_list '0.91837, 0.97879, 0.97908' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.entry_id 2OSD _reflns.d_resolution_high 2.300 _reflns.d_resolution_low 29.748 _reflns.number_obs 8939 _reflns.pdbx_Rmerge_I_obs 0.084 _reflns.pdbx_netI_over_sigmaI 6.600 _reflns.pdbx_Rsym_value 0.084 _reflns.pdbx_redundancy 6.900 _reflns.percent_possible_obs 99.900 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.30 2.36 ? 4511 ? 0.917 0.8 0.917 ? 7.10 ? 636 100.00 1 1 2.36 2.42 ? 4530 ? 0.829 0.9 0.829 ? 7.10 ? 639 100.00 2 1 2.42 2.49 ? 4184 ? 0.746 1.0 0.746 ? 7.10 ? 591 100.00 3 1 2.49 2.57 ? 4176 ? 0.578 1.3 0.578 ? 7.10 ? 591 100.00 4 1 2.57 2.66 ? 4160 ? 0.457 1.7 0.457 ? 7.00 ? 592 100.00 5 1 2.66 2.75 ? 3804 ? 0.377 2.1 0.377 ? 7.00 ? 540 100.00 6 1 2.75 2.85 ? 3817 ? 0.266 2.9 0.266 ? 7.00 ? 548 100.00 7 1 2.85 2.97 ? 3666 ? 0.2 3.8 0.2 ? 7.10 ? 520 100.00 8 1 2.97 3.10 ? 3492 ? 0.149 5.1 0.149 ? 6.90 ? 503 100.00 9 1 3.10 3.25 ? 3336 ? 0.123 6.0 0.123 ? 7.00 ? 477 100.00 10 1 3.25 3.43 ? 3167 ? 0.1 6.9 0.1 ? 6.90 ? 459 100.00 11 1 3.43 3.64 ? 2991 ? 0.079 8.4 0.079 ? 6.80 ? 437 100.00 12 1 3.64 3.89 ? 2875 ? 0.068 9.6 0.068 ? 6.90 ? 419 100.00 13 1 3.89 4.20 ? 2683 ? 0.058 10.0 0.058 ? 6.80 ? 395 100.00 14 1 4.20 4.60 ? 2401 ? 0.05 12.4 0.05 ? 6.70 ? 358 100.00 15 1 4.60 5.14 ? 2175 ? 0.044 14.3 0.044 ? 6.60 ? 331 100.00 16 1 5.14 5.94 ? 1946 ? 0.058 10.4 0.058 ? 6.40 ? 302 100.00 17 1 5.94 7.27 ? 1623 ? 0.061 10.1 0.061 ? 6.30 ? 259 100.00 18 1 7.27 10.29 ? 1249 ? 0.039 15.3 0.039 ? 5.90 ? 213 99.60 19 1 10.29 29.75 ? 635 ? 0.038 17.1 0.038 ? 4.90 ? 129 94.20 20 1 # _refine.entry_id 2OSD _refine.ls_d_res_high 2.300 _refine.ls_d_res_low 29.748 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 99.930 _refine.ls_number_reflns_obs 8895 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1. HYDROGENS HAVE BEEN ADDED IN RIDING POSITIONS. 2. ATOM RECORD CONTAINS RESIDUAL B FACTORS ONLY. 3. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 TO ACCOUNT FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 4. RESIDUES 45-46 ARE DISORDERED AND NOT VISIBLE IN THE ELECTRON DENSITY MAPS. THEY WERE NOT MODELED. 5. TWO CA, THREE ETHYLENE GLYCOL MOLECULES, ONE CL ION FROM THE CRYSTALLIZATION BUFFER WERE MODELED INTO THE STRUCTURE. 6. A ZN ATOM OF THE SUBUNIT IN THE ASYMMETRIC UNIT IS COORDINATED TO THE SIDE CHAINS OF HIS 116, GLU 139, CYS 142 AND CYS 150. X-RAY FLUORESCENCE EXPERIMENTS SUPPORT THE ASSIGNMENT OF THE ZINC ION. ; _refine.ls_R_factor_all 0.221 _refine.ls_R_factor_R_work 0.219 _refine.ls_R_factor_R_free 0.242 _refine.ls_percent_reflns_R_free 4.700 _refine.ls_number_reflns_R_free 421 _refine.B_iso_mean 54.040 _refine.aniso_B[1][1] 0.710 _refine.aniso_B[2][2] 0.710 _refine.aniso_B[3][3] -1.430 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.950 _refine.correlation_coeff_Fo_to_Fc_free 0.951 _refine.pdbx_overall_ESU_R 0.305 _refine.pdbx_overall_ESU_R_Free 0.217 _refine.overall_SU_ML 0.198 _refine.overall_SU_B 15.426 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_obs 0.221 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1177 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 16 _refine_hist.number_atoms_solvent 30 _refine_hist.number_atoms_total 1223 _refine_hist.d_res_high 2.300 _refine_hist.d_res_low 29.748 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 1234 0.017 0.022 ? 'X-RAY DIFFRACTION' ? r_bond_other_d 845 0.002 0.020 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1665 1.574 1.984 ? 'X-RAY DIFFRACTION' ? r_angle_other_deg 2078 0.962 3.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 152 6.220 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 54 40.617 25.926 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 211 19.236 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 1 31.953 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 181 0.091 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1355 0.005 0.020 ? 'X-RAY DIFFRACTION' ? r_gen_planes_other 237 0.002 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 241 0.226 0.200 ? 'X-RAY DIFFRACTION' ? r_nbd_other 777 0.187 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 587 0.193 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_other 647 0.093 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 41 0.189 0.200 ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined 4 0.323 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 18 0.375 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 34 0.183 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 4 0.113 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined 2 0.137 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 790 2.223 3.000 ? 'X-RAY DIFFRACTION' ? r_mcbond_other 302 0.446 3.000 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1232 3.526 5.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 512 6.368 8.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 432 7.963 11.000 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 2.300 _refine_ls_shell.d_res_low 2.360 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 99.840 _refine_ls_shell.number_reflns_R_work 603 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.281 _refine_ls_shell.R_factor_R_free 0.297 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 29 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs 632 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2OSD _struct.title 'Crystal structure of a vinyl-4-reductase family protein (mj_1460) from methanocaldococcus jannaschii dsm at 2.40 A resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text 'Structural genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2, metal binding protein' _struct_keywords.pdbx_keywords 'METAL BINDING PROTEIN' _struct_keywords.entry_id 2OSD # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 5 ? G N N 5 ? H N N 5 ? I N N 6 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ILE A 8 ? ASN A 18 ? ILE A 7 ASN A 17 1 ? 11 HELX_P HELX_P2 2 ASN A 18 ? SER A 25 ? ASN A 17 SER A 24 1 ? 8 HELX_P HELX_P3 3 PRO A 29 ? LYS A 45 ? PRO A 28 LYS A 44 1 ? 17 HELX_P HELX_P4 4 SER A 52 ? SER A 65 ? SER A 51 SER A 64 1 ? 14 HELX_P HELX_P5 5 ASN A 68 ? ASN A 80 ? ASN A 67 ASN A 79 1 ? 13 HELX_P HELX_P6 6 ASP A 87 ? LEU A 93 ? ASP A 86 LEU A 92 1 ? 7 HELX_P HELX_P7 7 HIS A 117 ? TYR A 133 ? HIS A 116 TYR A 132 1 ? 17 HELX_P HELX_P8 8 CYS A 143 ? GLY A 147 ? CYS A 142 GLY A 146 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A PRO 29 C ? ? ? 1_555 A MSE 30 N ? ? A PRO 28 A MSE 29 1_555 ? ? ? ? ? ? ? 1.319 ? ? covale2 covale both ? A MSE 30 C ? ? ? 1_555 A PRO 31 N ? ? A MSE 29 A PRO 30 1_555 ? ? ? ? ? ? ? 1.340 ? ? covale3 covale both ? A LYS 62 C ? ? ? 1_555 A MSE 63 N ? ? A LYS 61 A MSE 62 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale4 covale both ? A MSE 63 C ? ? ? 1_555 A LEU 64 N ? ? A MSE 62 A LEU 63 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale5 covale both ? A LEU 78 C ? ? ? 1_555 A MSE 79 N ? ? A LEU 77 A MSE 78 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale6 covale both ? A MSE 79 C ? ? ? 1_555 A ASN 80 N ? ? A MSE 78 A ASN 79 1_555 ? ? ? ? ? ? ? 1.327 ? ? metalc1 metalc ? ? A GLU 20 OE1 ? ? ? 5_555 B CA . CA ? ? A GLU 19 A CA 163 1_555 ? ? ? ? ? ? ? 2.617 ? ? metalc2 metalc ? ? A GLU 20 OE2 ? ? ? 5_555 B CA . CA ? ? A GLU 19 A CA 163 1_555 ? ? ? ? ? ? ? 2.388 ? ? metalc3 metalc ? ? A GLU 20 OE2 ? ? ? 5_555 C CA . CA ? ? A GLU 19 A CA 164 1_555 ? ? ? ? ? ? ? 2.468 ? ? metalc4 metalc ? ? A GLU 24 OE2 ? ? ? 5_555 C CA . CA ? ? A GLU 23 A CA 164 1_555 ? ? ? ? ? ? ? 2.229 ? ? metalc5 metalc ? ? A GLU 24 OE1 ? ? ? 5_555 C CA . CA ? ? A GLU 23 A CA 164 1_555 ? ? ? ? ? ? ? 2.843 ? ? metalc6 metalc ? ? A HIS 117 ND1 ? ? ? 1_555 E ZN . ZN ? ? A HIS 116 A ZN 166 1_555 ? ? ? ? ? ? ? 2.131 ? ? metalc7 metalc ? ? A GLU 129 OE2 ? ? ? 1_555 B CA . CA ? ? A GLU 128 A CA 163 1_555 ? ? ? ? ? ? ? 1.970 ? ? metalc8 metalc ? ? A GLU 130 OE2 ? ? ? 1_555 B CA . CA ? ? A GLU 129 A CA 163 1_555 ? ? ? ? ? ? ? 2.557 ? ? metalc9 metalc ? ? A GLU 130 OE2 ? ? ? 1_555 C CA . CA ? ? A GLU 129 A CA 164 1_555 ? ? ? ? ? ? ? 2.652 ? ? metalc10 metalc ? ? A GLU 130 OE1 ? ? ? 1_555 C CA . CA ? ? A GLU 129 A CA 164 1_555 ? ? ? ? ? ? ? 2.602 ? ? metalc11 metalc ? ? A GLU 140 OE2 ? ? ? 1_555 E ZN . ZN ? ? A GLU 139 A ZN 166 1_555 ? ? ? ? ? ? ? 2.063 ? ? metalc12 metalc ? ? A CYS 143 SG ? ? ? 1_555 E ZN . ZN ? ? A CYS 142 A ZN 166 1_555 ? ? ? ? ? ? ? 2.381 ? ? metalc13 metalc ? ? A CYS 151 SG ? ? ? 1_555 E ZN . ZN ? ? A CYS 150 A ZN 166 1_555 ? ? ? ? ? ? ? 2.019 ? ? metalc14 metalc ? ? B CA . CA ? ? ? 1_555 I HOH . O ? ? A CA 163 A HOH 183 1_555 ? ? ? ? ? ? ? 2.460 ? ? metalc15 metalc ? ? B CA . CA ? ? ? 1_555 I HOH . O ? ? A CA 163 A HOH 184 1_555 ? ? ? ? ? ? ? 2.545 ? ? metalc16 metalc ? ? B CA . CA ? ? ? 1_555 I HOH . O ? ? A CA 163 A HOH 186 1_555 ? ? ? ? ? ? ? 2.081 ? ? metalc17 metalc ? ? C CA . CA ? ? ? 1_555 I HOH . O ? ? A CA 164 A HOH 181 1_555 ? ? ? ? ? ? ? 2.512 ? ? metalc18 metalc ? ? C CA . CA ? ? ? 1_555 I HOH . O ? ? A CA 164 A HOH 193 1_555 ? ? ? ? ? ? ? 2.230 ? ? metalc19 metalc ? ? C CA . CA ? ? ? 1_555 I HOH . O ? ? A CA 164 A HOH 198 1_555 ? ? ? ? ? ? ? 2.172 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id PRO _struct_mon_prot_cis.label_seq_id 96 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id PRO _struct_mon_prot_cis.auth_seq_id 95 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 97 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 96 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -8.62 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 4 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ASP A 83 ? GLU A 85 ? ASP A 82 GLU A 84 A 2 TYR A 98 ? SER A 103 ? TYR A 97 SER A 102 A 3 CYS A 151 ? LYS A 156 ? CYS A 150 LYS A 155 A 4 VAL A 137 ? GLU A 142 ? VAL A 136 GLU A 141 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLU A 85 ? N GLU A 84 O LYS A 101 ? O LYS A 100 A 2 3 N ILE A 100 ? N ILE A 99 O PHE A 153 ? O PHE A 152 A 3 4 O GLU A 154 ? O GLU A 153 N ASN A 139 ? N ASN A 138 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A CA 163 ? 6 'BINDING SITE FOR RESIDUE CA A 163' AC2 Software A CA 164 ? 6 'BINDING SITE FOR RESIDUE CA A 164' AC3 Software A CL 165 ? 5 'BINDING SITE FOR RESIDUE CL A 165' AC4 Software A ZN 166 ? 4 'BINDING SITE FOR RESIDUE ZN A 166' AC5 Software A EDO 167 ? 2 'BINDING SITE FOR RESIDUE EDO A 167' AC6 Software A EDO 168 ? 3 'BINDING SITE FOR RESIDUE EDO A 168' AC7 Software A EDO 169 ? 2 'BINDING SITE FOR RESIDUE EDO A 169' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 GLU A 20 ? GLU A 19 . ? 5_555 ? 2 AC1 6 GLU A 129 ? GLU A 128 . ? 1_555 ? 3 AC1 6 GLU A 130 ? GLU A 129 . ? 1_555 ? 4 AC1 6 HOH I . ? HOH A 183 . ? 1_555 ? 5 AC1 6 HOH I . ? HOH A 184 . ? 1_555 ? 6 AC1 6 HOH I . ? HOH A 186 . ? 1_555 ? 7 AC2 6 GLU A 20 ? GLU A 19 . ? 5_555 ? 8 AC2 6 GLU A 24 ? GLU A 23 . ? 5_555 ? 9 AC2 6 GLU A 130 ? GLU A 129 . ? 1_555 ? 10 AC2 6 HOH I . ? HOH A 181 . ? 1_555 ? 11 AC2 6 HOH I . ? HOH A 193 . ? 1_555 ? 12 AC2 6 HOH I . ? HOH A 198 . ? 1_555 ? 13 AC3 5 SER A 25 ? SER A 24 . ? 8_555 ? 14 AC3 5 LYS A 26 ? LYS A 25 . ? 8_555 ? 15 AC3 5 MSE A 30 ? MSE A 29 . ? 1_555 ? 16 AC3 5 TYR A 107 ? TYR A 106 . ? 1_555 ? 17 AC3 5 HOH I . ? HOH A 190 . ? 1_555 ? 18 AC4 4 HIS A 117 ? HIS A 116 . ? 1_555 ? 19 AC4 4 GLU A 140 ? GLU A 139 . ? 1_555 ? 20 AC4 4 CYS A 143 ? CYS A 142 . ? 1_555 ? 21 AC4 4 CYS A 151 ? CYS A 150 . ? 1_555 ? 22 AC5 2 PHE A 33 ? PHE A 32 . ? 1_555 ? 23 AC5 2 TYR A 107 ? TYR A 106 . ? 1_555 ? 24 AC6 3 SER A 65 ? SER A 64 . ? 1_555 ? 25 AC6 3 PRO A 66 ? PRO A 65 . ? 1_555 ? 26 AC6 3 GLU A 130 ? GLU A 129 . ? 1_555 ? 27 AC7 2 ASN A 139 ? ASN A 138 . ? 1_555 ? 28 AC7 2 GLU A 140 ? GLU A 139 . ? 1_555 ? # _atom_sites.entry_id 2OSD _atom_sites.fract_transf_matrix[1][1] 0.01793 _atom_sites.fract_transf_matrix[1][2] 0.00000 _atom_sites.fract_transf_matrix[1][3] 0.00000 _atom_sites.fract_transf_matrix[2][1] 0.00000 _atom_sites.fract_transf_matrix[2][2] 0.01793 _atom_sites.fract_transf_matrix[2][3] 0.00000 _atom_sites.fract_transf_matrix[3][1] 0.00000 _atom_sites.fract_transf_matrix[3][2] 0.00000 _atom_sites.fract_transf_matrix[3][3] 0.00840 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA CL N O S SE ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 MSE 2 1 ? ? ? A . n A 1 3 ALA 3 2 ? ? ? A . n A 1 4 PHE 4 3 ? ? ? A . n A 1 5 MSE 5 4 ? ? ? A . n A 1 6 GLU 6 5 5 GLU GLU A . n A 1 7 LYS 7 6 6 LYS LYS A . n A 1 8 ILE 8 7 7 ILE ILE A . n A 1 9 PHE 9 8 8 PHE PHE A . n A 1 10 PRO 10 9 9 PRO PRO A . n A 1 11 ASP 11 10 10 ASP ASP A . n A 1 12 ILE 12 11 11 ILE ILE A . n A 1 13 LEU 13 12 12 LEU LEU A . n A 1 14 GLU 14 13 13 GLU GLU A . n A 1 15 ALA 15 14 14 ALA ALA A . n A 1 16 ILE 16 15 15 ILE ILE A . n A 1 17 ARG 17 16 16 ARG ARG A . n A 1 18 ASN 18 17 17 ASN ASN A . n A 1 19 GLU 19 18 18 GLU GLU A . n A 1 20 GLU 20 19 19 GLU GLU A . n A 1 21 ILE 21 20 20 ILE ILE A . n A 1 22 ILE 22 21 21 ILE ILE A . n A 1 23 LYS 23 22 22 LYS LYS A . n A 1 24 GLU 24 23 23 GLU GLU A . n A 1 25 SER 25 24 24 SER SER A . n A 1 26 LYS 26 25 25 LYS LYS A . n A 1 27 LYS 27 26 26 LYS LYS A . n A 1 28 ILE 28 27 27 ILE ILE A . n A 1 29 PRO 29 28 28 PRO PRO A . n A 1 30 MSE 30 29 29 MSE MSE A . n A 1 31 PRO 31 30 30 PRO PRO A . n A 1 32 TYR 32 31 31 TYR TYR A . n A 1 33 PHE 33 32 32 PHE PHE A . n A 1 34 GLY 34 33 33 GLY GLY A . n A 1 35 LEU 35 34 34 LEU LEU A . n A 1 36 PHE 36 35 35 PHE PHE A . n A 1 37 ALA 37 36 36 ALA ALA A . n A 1 38 LEU 38 37 37 LEU LEU A . n A 1 39 VAL 39 38 38 VAL VAL A . n A 1 40 ILE 40 39 39 ILE ILE A . n A 1 41 PHE 41 40 40 PHE PHE A . n A 1 42 ASP 42 41 41 ASP ASP A . n A 1 43 LYS 43 42 42 LYS LYS A . n A 1 44 VAL 44 43 43 VAL VAL A . n A 1 45 LYS 45 44 44 LYS LYS A . n A 1 46 GLU 46 45 ? ? ? A . n A 1 47 LEU 47 46 ? ? ? A . n A 1 48 GLY 48 47 47 GLY GLY A . n A 1 49 SER 49 48 48 SER SER A . n A 1 50 GLU 50 49 49 GLU GLU A . n A 1 51 THR 51 50 50 THR THR A . n A 1 52 SER 52 51 51 SER SER A . n A 1 53 LEU 53 52 52 LEU LEU A . n A 1 54 TYR 54 53 53 TYR TYR A . n A 1 55 GLU 55 54 54 GLU GLU A . n A 1 56 ILE 56 55 55 ILE ILE A . n A 1 57 GLY 57 56 56 GLY GLY A . n A 1 58 GLU 58 57 57 GLU GLU A . n A 1 59 GLU 59 58 58 GLU GLU A . n A 1 60 PHE 60 59 59 PHE PHE A . n A 1 61 GLY 61 60 60 GLY GLY A . n A 1 62 LYS 62 61 61 LYS LYS A . n A 1 63 MSE 63 62 62 MSE MSE A . n A 1 64 LEU 64 63 63 LEU LEU A . n A 1 65 SER 65 64 64 SER SER A . n A 1 66 PRO 66 65 65 PRO PRO A . n A 1 67 LYS 67 66 66 LYS LYS A . n A 1 68 ASN 68 67 67 ASN ASN A . n A 1 69 ILE 69 68 68 ILE ILE A . n A 1 70 GLU 70 69 69 GLU GLU A . n A 1 71 GLU 71 70 70 GLU GLU A . n A 1 72 LEU 72 71 71 LEU LEU A . n A 1 73 LYS 73 72 72 LYS LYS A . n A 1 74 LYS 74 73 73 LYS LYS A . n A 1 75 ILE 75 74 74 ILE ILE A . n A 1 76 PHE 76 75 75 PHE PHE A . n A 1 77 LYS 77 76 76 LYS LYS A . n A 1 78 LEU 78 77 77 LEU LEU A . n A 1 79 MSE 79 78 78 MSE MSE A . n A 1 80 ASN 80 79 79 ASN ASN A . n A 1 81 PHE 81 80 80 PHE PHE A . n A 1 82 GLY 82 81 81 GLY GLY A . n A 1 83 ASP 83 82 82 ASP ASP A . n A 1 84 LEU 84 83 83 LEU LEU A . n A 1 85 GLU 85 84 84 GLU GLU A . n A 1 86 ILE 86 85 85 ILE ILE A . n A 1 87 ASP 87 86 86 ASP ASP A . n A 1 88 GLU 88 87 87 GLU GLU A . n A 1 89 ASN 89 88 88 ASN ASN A . n A 1 90 LYS 90 89 89 LYS LYS A . n A 1 91 ILE 91 90 90 ILE ILE A . n A 1 92 LEU 92 91 91 LEU LEU A . n A 1 93 LEU 93 92 92 LEU LEU A . n A 1 94 LYS 94 93 93 LYS LYS A . n A 1 95 ASN 95 94 94 ASN ASN A . n A 1 96 PRO 96 95 95 PRO PRO A . n A 1 97 PRO 97 96 96 PRO PRO A . n A 1 98 TYR 98 97 97 TYR TYR A . n A 1 99 LYS 99 98 98 LYS LYS A . n A 1 100 ILE 100 99 99 ILE ILE A . n A 1 101 LYS 101 100 100 LYS LYS A . n A 1 102 LEU 102 101 101 LEU LEU A . n A 1 103 SER 103 102 102 SER SER A . n A 1 104 ASN 104 103 103 ASN ASN A . n A 1 105 PRO 105 104 104 PRO PRO A . n A 1 106 PRO 106 105 105 PRO PRO A . n A 1 107 TYR 107 106 106 TYR TYR A . n A 1 108 GLN 108 107 107 GLN GLN A . n A 1 109 TRP 109 108 108 TRP TRP A . n A 1 110 VAL 110 109 109 VAL VAL A . n A 1 111 SER 111 110 110 SER SER A . n A 1 112 LYS 112 111 111 LYS LYS A . n A 1 113 GLU 113 112 112 GLU GLU A . n A 1 114 GLU 114 113 113 GLU GLU A . n A 1 115 PRO 115 114 114 PRO PRO A . n A 1 116 ILE 116 115 115 ILE ILE A . n A 1 117 HIS 117 116 116 HIS HIS A . n A 1 118 ASP 118 117 117 ASP ASP A . n A 1 119 PHE 119 118 118 PHE PHE A . n A 1 120 ILE 120 119 119 ILE ILE A . n A 1 121 ALA 121 120 120 ALA ALA A . n A 1 122 GLY 122 121 121 GLY GLY A . n A 1 123 ILE 123 122 122 ILE ILE A . n A 1 124 LEU 124 123 123 LEU LEU A . n A 1 125 ALA 125 124 124 ALA ALA A . n A 1 126 GLY 126 125 125 GLY GLY A . n A 1 127 CYS 127 126 126 CYS CYS A . n A 1 128 LEU 128 127 127 LEU LEU A . n A 1 129 GLU 129 128 128 GLU GLU A . n A 1 130 GLU 130 129 129 GLU GLU A . n A 1 131 ILE 131 130 130 ILE ILE A . n A 1 132 PHE 132 131 131 PHE PHE A . n A 1 133 TYR 133 132 132 TYR TYR A . n A 1 134 TYR 134 133 133 TYR TYR A . n A 1 135 TYR 135 134 134 TYR TYR A . n A 1 136 PHE 136 135 135 PHE PHE A . n A 1 137 VAL 137 136 136 VAL VAL A . n A 1 138 VAL 138 137 137 VAL VAL A . n A 1 139 ASN 139 138 138 ASN ASN A . n A 1 140 GLU 140 139 139 GLU GLU A . n A 1 141 VAL 141 140 140 VAL VAL A . n A 1 142 GLU 142 141 141 GLU GLU A . n A 1 143 CYS 143 142 142 CYS CYS A . n A 1 144 VAL 144 143 143 VAL VAL A . n A 1 145 SER 145 144 144 SER SER A . n A 1 146 GLN 146 145 145 GLN GLN A . n A 1 147 GLY 147 146 146 GLY GLY A . n A 1 148 LYS 148 147 147 LYS LYS A . n A 1 149 ASP 149 148 148 ASP ASP A . n A 1 150 LYS 150 149 149 LYS LYS A . n A 1 151 CYS 151 150 150 CYS CYS A . n A 1 152 VAL 152 151 151 VAL VAL A . n A 1 153 PHE 153 152 152 PHE PHE A . n A 1 154 GLU 154 153 153 GLU GLU A . n A 1 155 VAL 155 154 154 VAL VAL A . n A 1 156 LYS 156 155 155 LYS LYS A . n A 1 157 GLU 157 156 156 GLU GLU A . n A 1 158 VAL 158 157 ? ? ? A . n A 1 159 ASP 159 158 ? ? ? A . n A 1 160 GLU 160 159 ? ? ? A . n A 1 161 LEU 161 160 ? ? ? A . n A 1 162 ASN 162 161 ? ? ? A . n A 1 163 LYS 163 162 ? ? ? A . n # _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA 1 163 1 CA CA A . C 2 CA 1 164 2 CA CA A . D 3 CL 1 165 3 CL CL A . E 4 ZN 1 166 4 ZN ZN A . F 5 EDO 1 167 5 EDO EDO A . G 5 EDO 1 168 6 EDO EDO A . H 5 EDO 1 169 7 EDO EDO A . I 6 HOH 1 170 8 HOH HOH A . I 6 HOH 2 171 9 HOH HOH A . I 6 HOH 3 172 10 HOH HOH A . I 6 HOH 4 173 11 HOH HOH A . I 6 HOH 5 174 12 HOH HOH A . I 6 HOH 6 175 13 HOH HOH A . I 6 HOH 7 176 14 HOH HOH A . I 6 HOH 8 177 15 HOH HOH A . I 6 HOH 9 178 16 HOH HOH A . I 6 HOH 10 179 17 HOH HOH A . I 6 HOH 11 180 18 HOH HOH A . I 6 HOH 12 181 19 HOH HOH A . I 6 HOH 13 182 20 HOH HOH A . I 6 HOH 14 183 21 HOH HOH A . I 6 HOH 15 184 22 HOH HOH A . I 6 HOH 16 185 23 HOH HOH A . I 6 HOH 17 186 24 HOH HOH A . I 6 HOH 18 187 25 HOH HOH A . I 6 HOH 19 188 26 HOH HOH A . I 6 HOH 20 189 27 HOH HOH A . I 6 HOH 21 190 28 HOH HOH A . I 6 HOH 22 191 29 HOH HOH A . I 6 HOH 23 192 30 HOH HOH A . I 6 HOH 24 193 31 HOH HOH A . I 6 HOH 25 194 32 HOH HOH A . I 6 HOH 26 195 33 HOH HOH A . I 6 HOH 27 196 34 HOH HOH A . I 6 HOH 28 197 35 HOH HOH A . I 6 HOH 29 198 36 HOH HOH A . I 6 HOH 30 199 37 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 30 A MSE 29 ? MET SELENOMETHIONINE 2 A MSE 63 A MSE 62 ? MET SELENOMETHIONINE 3 A MSE 79 A MSE 78 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 7460 ? 1 MORE -105 ? 1 'SSA (A^2)' 13200 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 8_555 -y,-x,-z+1/2 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 59.4950000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OE1 ? A GLU 20 ? A GLU 19 ? 5_555 CA ? B CA . ? A CA 163 ? 1_555 OE2 ? A GLU 20 ? A GLU 19 ? 5_555 53.3 ? 2 OE1 ? A GLU 20 ? A GLU 19 ? 5_555 CA ? B CA . ? A CA 163 ? 1_555 OE2 ? A GLU 129 ? A GLU 128 ? 1_555 114.9 ? 3 OE2 ? A GLU 20 ? A GLU 19 ? 5_555 CA ? B CA . ? A CA 163 ? 1_555 OE2 ? A GLU 129 ? A GLU 128 ? 1_555 162.1 ? 4 OE1 ? A GLU 20 ? A GLU 19 ? 5_555 CA ? B CA . ? A CA 163 ? 1_555 OE2 ? A GLU 130 ? A GLU 129 ? 1_555 127.8 ? 5 OE2 ? A GLU 20 ? A GLU 19 ? 5_555 CA ? B CA . ? A CA 163 ? 1_555 OE2 ? A GLU 130 ? A GLU 129 ? 1_555 77.5 ? 6 OE2 ? A GLU 129 ? A GLU 128 ? 1_555 CA ? B CA . ? A CA 163 ? 1_555 OE2 ? A GLU 130 ? A GLU 129 ? 1_555 107.6 ? 7 OE1 ? A GLU 20 ? A GLU 19 ? 5_555 CA ? B CA . ? A CA 163 ? 1_555 O ? I HOH . ? A HOH 183 ? 1_555 74.8 ? 8 OE2 ? A GLU 20 ? A GLU 19 ? 5_555 CA ? B CA . ? A CA 163 ? 1_555 O ? I HOH . ? A HOH 183 ? 1_555 79.9 ? 9 OE2 ? A GLU 129 ? A GLU 128 ? 1_555 CA ? B CA . ? A CA 163 ? 1_555 O ? I HOH . ? A HOH 183 ? 1_555 84.0 ? 10 OE2 ? A GLU 130 ? A GLU 129 ? 1_555 CA ? B CA . ? A CA 163 ? 1_555 O ? I HOH . ? A HOH 183 ? 1_555 81.3 ? 11 OE1 ? A GLU 20 ? A GLU 19 ? 5_555 CA ? B CA . ? A CA 163 ? 1_555 O ? I HOH . ? A HOH 184 ? 1_555 101.1 ? 12 OE2 ? A GLU 20 ? A GLU 19 ? 5_555 CA ? B CA . ? A CA 163 ? 1_555 O ? I HOH . ? A HOH 184 ? 1_555 122.9 ? 13 OE2 ? A GLU 129 ? A GLU 128 ? 1_555 CA ? B CA . ? A CA 163 ? 1_555 O ? I HOH . ? A HOH 184 ? 1_555 69.8 ? 14 OE2 ? A GLU 130 ? A GLU 129 ? 1_555 CA ? B CA . ? A CA 163 ? 1_555 O ? I HOH . ? A HOH 184 ? 1_555 121.5 ? 15 O ? I HOH . ? A HOH 183 ? 1_555 CA ? B CA . ? A CA 163 ? 1_555 O ? I HOH . ? A HOH 184 ? 1_555 149.0 ? 16 OE1 ? A GLU 20 ? A GLU 19 ? 5_555 CA ? B CA . ? A CA 163 ? 1_555 O ? I HOH . ? A HOH 186 ? 1_555 112.3 ? 17 OE2 ? A GLU 20 ? A GLU 19 ? 5_555 CA ? B CA . ? A CA 163 ? 1_555 O ? I HOH . ? A HOH 186 ? 1_555 78.2 ? 18 OE2 ? A GLU 129 ? A GLU 128 ? 1_555 CA ? B CA . ? A CA 163 ? 1_555 O ? I HOH . ? A HOH 186 ? 1_555 119.6 ? 19 OE2 ? A GLU 130 ? A GLU 129 ? 1_555 CA ? B CA . ? A CA 163 ? 1_555 O ? I HOH . ? A HOH 186 ? 1_555 66.8 ? 20 O ? I HOH . ? A HOH 183 ? 1_555 CA ? B CA . ? A CA 163 ? 1_555 O ? I HOH . ? A HOH 186 ? 1_555 144.4 ? 21 O ? I HOH . ? A HOH 184 ? 1_555 CA ? B CA . ? A CA 163 ? 1_555 O ? I HOH . ? A HOH 186 ? 1_555 66.1 ? 22 OE2 ? A GLU 20 ? A GLU 19 ? 5_555 CA ? C CA . ? A CA 164 ? 1_555 OE2 ? A GLU 24 ? A GLU 23 ? 5_555 85.9 ? 23 OE2 ? A GLU 20 ? A GLU 19 ? 5_555 CA ? C CA . ? A CA 164 ? 1_555 OE1 ? A GLU 24 ? A GLU 23 ? 5_555 84.0 ? 24 OE2 ? A GLU 24 ? A GLU 23 ? 5_555 CA ? C CA . ? A CA 164 ? 1_555 OE1 ? A GLU 24 ? A GLU 23 ? 5_555 49.3 ? 25 OE2 ? A GLU 20 ? A GLU 19 ? 5_555 CA ? C CA . ? A CA 164 ? 1_555 OE2 ? A GLU 130 ? A GLU 129 ? 1_555 74.3 ? 26 OE2 ? A GLU 24 ? A GLU 23 ? 5_555 CA ? C CA . ? A CA 164 ? 1_555 OE2 ? A GLU 130 ? A GLU 129 ? 1_555 151.0 ? 27 OE1 ? A GLU 24 ? A GLU 23 ? 5_555 CA ? C CA . ? A CA 164 ? 1_555 OE2 ? A GLU 130 ? A GLU 129 ? 1_555 144.8 ? 28 OE2 ? A GLU 20 ? A GLU 19 ? 5_555 CA ? C CA . ? A CA 164 ? 1_555 OE1 ? A GLU 130 ? A GLU 129 ? 1_555 123.7 ? 29 OE2 ? A GLU 24 ? A GLU 23 ? 5_555 CA ? C CA . ? A CA 164 ? 1_555 OE1 ? A GLU 130 ? A GLU 129 ? 1_555 144.8 ? 30 OE1 ? A GLU 24 ? A GLU 23 ? 5_555 CA ? C CA . ? A CA 164 ? 1_555 OE1 ? A GLU 130 ? A GLU 129 ? 1_555 141.4 ? 31 OE2 ? A GLU 130 ? A GLU 129 ? 1_555 CA ? C CA . ? A CA 164 ? 1_555 OE1 ? A GLU 130 ? A GLU 129 ? 1_555 49.4 ? 32 OE2 ? A GLU 20 ? A GLU 19 ? 5_555 CA ? C CA . ? A CA 164 ? 1_555 O ? I HOH . ? A HOH 181 ? 1_555 157.6 ? 33 OE2 ? A GLU 24 ? A GLU 23 ? 5_555 CA ? C CA . ? A CA 164 ? 1_555 O ? I HOH . ? A HOH 181 ? 1_555 73.6 ? 34 OE1 ? A GLU 24 ? A GLU 23 ? 5_555 CA ? C CA . ? A CA 164 ? 1_555 O ? I HOH . ? A HOH 181 ? 1_555 75.9 ? 35 OE2 ? A GLU 130 ? A GLU 129 ? 1_555 CA ? C CA . ? A CA 164 ? 1_555 O ? I HOH . ? A HOH 181 ? 1_555 128.0 ? 36 OE1 ? A GLU 130 ? A GLU 129 ? 1_555 CA ? C CA . ? A CA 164 ? 1_555 O ? I HOH . ? A HOH 181 ? 1_555 78.6 ? 37 OE2 ? A GLU 20 ? A GLU 19 ? 5_555 CA ? C CA . ? A CA 164 ? 1_555 O ? I HOH . ? A HOH 193 ? 1_555 92.8 ? 38 OE2 ? A GLU 24 ? A GLU 23 ? 5_555 CA ? C CA . ? A CA 164 ? 1_555 O ? I HOH . ? A HOH 193 ? 1_555 86.9 ? 39 OE1 ? A GLU 24 ? A GLU 23 ? 5_555 CA ? C CA . ? A CA 164 ? 1_555 O ? I HOH . ? A HOH 193 ? 1_555 136.1 ? 40 OE2 ? A GLU 130 ? A GLU 129 ? 1_555 CA ? C CA . ? A CA 164 ? 1_555 O ? I HOH . ? A HOH 193 ? 1_555 73.4 ? 41 OE1 ? A GLU 130 ? A GLU 129 ? 1_555 CA ? C CA . ? A CA 164 ? 1_555 O ? I HOH . ? A HOH 193 ? 1_555 74.2 ? 42 O ? I HOH . ? A HOH 181 ? 1_555 CA ? C CA . ? A CA 164 ? 1_555 O ? I HOH . ? A HOH 193 ? 1_555 94.9 ? 43 OE2 ? A GLU 20 ? A GLU 19 ? 5_555 CA ? C CA . ? A CA 164 ? 1_555 O ? I HOH . ? A HOH 198 ? 1_555 99.9 ? 44 OE2 ? A GLU 24 ? A GLU 23 ? 5_555 CA ? C CA . ? A CA 164 ? 1_555 O ? I HOH . ? A HOH 198 ? 1_555 120.2 ? 45 OE1 ? A GLU 24 ? A GLU 23 ? 5_555 CA ? C CA . ? A CA 164 ? 1_555 O ? I HOH . ? A HOH 198 ? 1_555 72.0 ? 46 OE2 ? A GLU 130 ? A GLU 129 ? 1_555 CA ? C CA . ? A CA 164 ? 1_555 O ? I HOH . ? A HOH 198 ? 1_555 84.7 ? 47 OE1 ? A GLU 130 ? A GLU 129 ? 1_555 CA ? C CA . ? A CA 164 ? 1_555 O ? I HOH . ? A HOH 198 ? 1_555 76.6 ? 48 O ? I HOH . ? A HOH 181 ? 1_555 CA ? C CA . ? A CA 164 ? 1_555 O ? I HOH . ? A HOH 198 ? 1_555 83.2 ? 49 O ? I HOH . ? A HOH 193 ? 1_555 CA ? C CA . ? A CA 164 ? 1_555 O ? I HOH . ? A HOH 198 ? 1_555 150.6 ? 50 ND1 ? A HIS 117 ? A HIS 116 ? 1_555 ZN ? E ZN . ? A ZN 166 ? 1_555 OE2 ? A GLU 140 ? A GLU 139 ? 1_555 115.3 ? 51 ND1 ? A HIS 117 ? A HIS 116 ? 1_555 ZN ? E ZN . ? A ZN 166 ? 1_555 SG ? A CYS 143 ? A CYS 142 ? 1_555 103.3 ? 52 OE2 ? A GLU 140 ? A GLU 139 ? 1_555 ZN ? E ZN . ? A ZN 166 ? 1_555 SG ? A CYS 143 ? A CYS 142 ? 1_555 106.4 ? 53 ND1 ? A HIS 117 ? A HIS 116 ? 1_555 ZN ? E ZN . ? A ZN 166 ? 1_555 SG ? A CYS 151 ? A CYS 150 ? 1_555 109.6 ? 54 OE2 ? A GLU 140 ? A GLU 139 ? 1_555 ZN ? E ZN . ? A ZN 166 ? 1_555 SG ? A CYS 151 ? A CYS 150 ? 1_555 104.5 ? 55 SG ? A CYS 143 ? A CYS 142 ? 1_555 ZN ? E ZN . ? A ZN 166 ? 1_555 SG ? A CYS 151 ? A CYS 150 ? 1_555 118.2 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-02-20 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-18 5 'Structure model' 1 4 2021-10-20 6 'Structure model' 1 5 2023-01-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Derived calculations' 4 3 'Structure model' 'Version format compliance' 5 4 'Structure model' 'Refinement description' 6 5 'Structure model' 'Database references' 7 5 'Structure model' 'Derived calculations' 8 6 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' database_2 3 5 'Structure model' pdbx_struct_conn_angle 4 5 'Structure model' struct_conn 5 5 'Structure model' struct_ref_seq_dif 6 5 'Structure model' struct_site 7 6 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.classification' 2 4 'Structure model' '_software.name' 3 5 'Structure model' '_database_2.pdbx_DOI' 4 5 'Structure model' '_database_2.pdbx_database_accession' 5 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 6 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 7 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 8 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 9 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 10 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 11 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_symmetry' 12 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 13 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 14 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 15 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 16 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 17 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 18 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_symmetry' 19 5 'Structure model' '_pdbx_struct_conn_angle.value' 20 5 'Structure model' '_struct_conn.pdbx_dist_value' 21 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 22 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 23 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 24 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 25 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 26 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 27 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 28 5 'Structure model' '_struct_conn.ptnr1_symmetry' 29 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 30 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 31 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 32 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 33 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 34 5 'Structure model' '_struct_conn.ptnr2_label_seq_id' 35 5 'Structure model' '_struct_conn.ptnr2_symmetry' 36 5 'Structure model' '_struct_ref_seq_dif.details' 37 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 38 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 39 5 'Structure model' '_struct_site.pdbx_auth_seq_id' 40 6 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 12.6960 _pdbx_refine_tls.origin_y 4.8495 _pdbx_refine_tls.origin_z 28.4007 _pdbx_refine_tls.T[1][1] -0.1232 _pdbx_refine_tls.T[2][2] -0.3418 _pdbx_refine_tls.T[3][3] -0.2538 _pdbx_refine_tls.T[1][2] -0.0169 _pdbx_refine_tls.T[1][3] -0.0221 _pdbx_refine_tls.T[2][3] -0.0440 _pdbx_refine_tls.L[1][1] 3.7316 _pdbx_refine_tls.L[2][2] 4.8298 _pdbx_refine_tls.L[3][3] 5.0290 _pdbx_refine_tls.L[1][2] 0.0404 _pdbx_refine_tls.L[1][3] 0.1906 _pdbx_refine_tls.L[2][3] 1.3634 _pdbx_refine_tls.S[1][1] -0.1126 _pdbx_refine_tls.S[2][2] 0.1143 _pdbx_refine_tls.S[3][3] -0.0017 _pdbx_refine_tls.S[1][2] 0.0910 _pdbx_refine_tls.S[1][3] 0.3192 _pdbx_refine_tls.S[2][3] -0.1761 _pdbx_refine_tls.S[2][1] -0.2104 _pdbx_refine_tls.S[3][1] -0.5322 _pdbx_refine_tls.S[3][2] 0.3015 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' # _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_label_asym_id A _pdbx_refine_tls_group.beg_label_seq_id 6 _pdbx_refine_tls_group.end_label_asym_id A _pdbx_refine_tls_group.end_label_seq_id 157 _pdbx_refine_tls_group.selection ALL _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 5 _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 156 _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.selection_details ? # _phasing.method MAD # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 1 SHELX . ? package 'George Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 2 REFMAC 5.2.0019 ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran_77 ? 3 SCALA . ? other 'Phil Evans' pre@mrc-lmb.cam.ac.uk 'data scaling' http://www.ccp4.ac.uk/dist/html/INDEX.html Fortran_77 ? 4 PDB_EXTRACT 2.000 'April. 3, 2006' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 5 MAR345 CCD ? ? ? ? 'data collection' ? ? ? 6 MOSFLM . ? ? ? ? 'data reduction' ? ? ? 7 CCP4 '(SCALA)' ? ? ? ? 'data scaling' ? ? ? 8 SHELXD . ? ? ? ? phasing ? ? ? 9 autoSHARP . ? ? ? ? phasing ? ? ? 10 # _pdbx_database_remark.id 999 _pdbx_database_remark.text ; SEQUENCE 1. THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. 2. THE CONSTRUCT WAS ENGINEERED WITH THE FOLLOWING MUTATIONS: K132Y, K133Y AND K134Y ; # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CG _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 MSE _pdbx_validate_rmsd_angle.auth_seq_id_1 62 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 SE _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 MSE _pdbx_validate_rmsd_angle.auth_seq_id_2 62 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 CE _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 MSE _pdbx_validate_rmsd_angle.auth_seq_id_3 62 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 84.54 _pdbx_validate_rmsd_angle.angle_target_value 98.90 _pdbx_validate_rmsd_angle.angle_deviation -14.36 _pdbx_validate_rmsd_angle.angle_standard_deviation 2.20 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 64 ? ? 36.52 68.54 2 1 ASN A 79 ? ? 78.88 36.05 3 1 LEU A 92 ? ? -71.13 -77.48 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 5 ? CG ? A GLU 6 CG 2 1 Y 1 A GLU 5 ? CD ? A GLU 6 CD 3 1 Y 1 A GLU 5 ? OE1 ? A GLU 6 OE1 4 1 Y 1 A GLU 5 ? OE2 ? A GLU 6 OE2 5 1 Y 1 A LYS 6 ? CG ? A LYS 7 CG 6 1 Y 1 A LYS 6 ? CD ? A LYS 7 CD 7 1 Y 1 A LYS 6 ? CE ? A LYS 7 CE 8 1 Y 1 A LYS 6 ? NZ ? A LYS 7 NZ 9 1 Y 1 A LYS 22 ? CE ? A LYS 23 CE 10 1 Y 1 A LYS 22 ? NZ ? A LYS 23 NZ 11 1 Y 1 A LYS 42 ? CE ? A LYS 43 CE 12 1 Y 1 A LYS 42 ? NZ ? A LYS 43 NZ 13 1 Y 1 A LYS 44 ? CG ? A LYS 45 CG 14 1 Y 1 A LYS 44 ? CD ? A LYS 45 CD 15 1 Y 1 A LYS 44 ? CE ? A LYS 45 CE 16 1 Y 1 A LYS 44 ? NZ ? A LYS 45 NZ 17 1 Y 1 A SER 48 ? OG ? A SER 49 OG 18 1 Y 1 A LYS 66 ? CD ? A LYS 67 CD 19 1 Y 1 A LYS 66 ? CE ? A LYS 67 CE 20 1 Y 1 A LYS 66 ? NZ ? A LYS 67 NZ 21 1 Y 1 A LYS 73 ? CG ? A LYS 74 CG 22 1 Y 1 A LYS 73 ? CD ? A LYS 74 CD 23 1 Y 1 A LYS 73 ? CE ? A LYS 74 CE 24 1 Y 1 A LYS 73 ? NZ ? A LYS 74 NZ 25 1 Y 1 A LYS 76 ? CE ? A LYS 77 CE 26 1 Y 1 A LYS 76 ? NZ ? A LYS 77 NZ 27 1 Y 1 A ASN 88 ? OD1 ? A ASN 89 OD1 28 1 Y 1 A ASN 88 ? ND2 ? A ASN 89 ND2 29 1 Y 1 A LYS 89 ? CD ? A LYS 90 CD 30 1 Y 1 A LYS 89 ? CE ? A LYS 90 CE 31 1 Y 1 A LYS 89 ? NZ ? A LYS 90 NZ 32 1 Y 1 A ILE 90 ? CG1 ? A ILE 91 CG1 33 1 Y 1 A ILE 90 ? CD1 ? A ILE 91 CD1 34 1 Y 1 A LEU 91 ? CG ? A LEU 92 CG 35 1 Y 1 A LEU 91 ? CD1 ? A LEU 92 CD1 36 1 Y 1 A LEU 91 ? CD2 ? A LEU 92 CD2 37 1 Y 1 A LEU 92 ? CG ? A LEU 93 CG 38 1 Y 1 A LEU 92 ? CD1 ? A LEU 93 CD1 39 1 Y 1 A LEU 92 ? CD2 ? A LEU 93 CD2 40 1 Y 1 A LYS 93 ? CG ? A LYS 94 CG 41 1 Y 1 A LYS 93 ? CD ? A LYS 94 CD 42 1 Y 1 A LYS 93 ? CE ? A LYS 94 CE 43 1 Y 1 A LYS 93 ? NZ ? A LYS 94 NZ 44 1 Y 1 A ASN 94 ? OD1 ? A ASN 95 OD1 45 1 Y 1 A ASN 94 ? ND2 ? A ASN 95 ND2 46 1 Y 1 A LYS 111 ? NZ ? A LYS 112 NZ 47 1 Y 1 A GLU 112 ? OE1 ? A GLU 113 OE1 48 1 Y 1 A GLU 112 ? OE2 ? A GLU 113 OE2 49 1 Y 1 A GLU 113 ? OE1 ? A GLU 114 OE1 50 1 Y 1 A GLU 113 ? OE2 ? A GLU 114 OE2 51 1 Y 1 A GLU 153 ? OE1 ? A GLU 154 OE1 52 1 Y 1 A LYS 155 ? CD ? A LYS 156 CD 53 1 Y 1 A LYS 155 ? CE ? A LYS 156 CE 54 1 Y 1 A LYS 155 ? NZ ? A LYS 156 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 0 ? A GLY 1 2 1 Y 1 A MSE 1 ? A MSE 2 3 1 Y 1 A ALA 2 ? A ALA 3 4 1 Y 1 A PHE 3 ? A PHE 4 5 1 Y 1 A MSE 4 ? A MSE 5 6 1 Y 1 A GLU 45 ? A GLU 46 7 1 Y 1 A LEU 46 ? A LEU 47 8 1 Y 1 A VAL 157 ? A VAL 158 9 1 Y 1 A ASP 158 ? A ASP 159 10 1 Y 1 A GLU 159 ? A GLU 160 11 1 Y 1 A LEU 160 ? A LEU 161 12 1 Y 1 A ASN 161 ? A ASN 162 13 1 Y 1 A LYS 162 ? A LYS 163 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CALCIUM ION' CA 3 'CHLORIDE ION' CL 4 'ZINC ION' ZN 5 1,2-ETHANEDIOL EDO 6 water HOH #