HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 12-FEB-07 2OUT TITLE SOLUTION STRUCTURE OF HI1506, A NOVEL TWO DOMAIN PROTEIN FROM TITLE 2 HAEMOPHILUS INFLUENZAE COMPND MOL_ID: 1; COMPND 2 MOLECULE: MU-LIKE PROPHAGE FLUMU PROTEIN GP35, PROTEIN HI1507 IN MU- COMPND 3 LIKE PROPHAGE FLUMU REGION; COMPND 4 CHAIN: A; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HAEMOPHILUS INFLUENZAE; SOURCE 3 ORGANISM_TAXID: 727; SOURCE 4 STRAIN: DSM 11121, KW20, RD; SOURCE 5 ATCC: 51907, 51907; SOURCE 6 GENE: HI1506, HI1507; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21 STAR DE3; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: RECOMBINANT AMPICILLIN-RESISTANT SOURCE 11 PLASMID; SOURCE 12 EXPRESSION_SYSTEM_PLASMID: PET 100/D-TOPO KEYWDS STRUCTURAL GENOMICS, HAEMOPHILUS INFLUENZAE, HYPOTHETICAL PROTEIN, KEYWDS 2 STRUCTURE 2 FUNCTION PROJECT, S2F, UNKNOWN FUNCTION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR N.SARI,Y.HE,V.DOSEEVA,K.SURABIAN,F.SCHWARZ,O.HERZBERG,J.ORBAN, AUTHOR 2 STRUCTURE 2 FUNCTION PROJECT (S2F) REVDAT 3 16-MAR-22 2OUT 1 REMARK SEQADV REVDAT 2 24-FEB-09 2OUT 1 VERSN REVDAT 1 01-MAY-07 2OUT 0 JRNL AUTH N.SARI,Y.HE,V.DOSEEVA,K.SURABIAN,J.RAMPRAKASH,F.SCHWARZ, JRNL AUTH 2 O.HERZBERG,J.ORBAN JRNL TITL SOLUTION STRUCTURE OF HI1506, A NOVEL TWO-DOMAIN PROTEIN JRNL TITL 2 FROM HAEMOPHILUS INFLUENZAE. JRNL REF PROTEIN SCI. V. 16 977 2007 JRNL REFN ISSN 0961-8368 JRNL PMID 17400915 JRNL DOI 10.1110/PS.072820907 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : XWINNMR 3.5, CNS 1.1 REMARK 3 AUTHORS : BRUKER-BIOSPIN (XWINNMR), BRUNGER (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2OUT COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-MAR-07. REMARK 100 THE DEPOSITION ID IS D_1000041612. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 50MM POTASSIUM PHOSPHATE, 100MM REMARK 210 NACL, 1MM DTT REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1MM HI1506 U-13C, 15N REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY; 3D_15N REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CNS 1.1, NMRPIPE, SPARKY REMARK 210 METHOD USED : STRUCTURES WERE CALCULATED USING REMARK 210 STANDARD SIMULATED ANNEALING AND REMARK 210 TORSION ANGLE DYNAMICS PROTOCOLS REMARK 210 IN CNS VERSION 1.1 REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH ACCEPTABLE REMARK 210 COVALENT GEOMETRY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: REMARK 210 THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE NMR REMARK 210 SPECTROSCOPY. REMARK 210 THE PROTEIN CONSISTS OF TWO DOMAINS CONNECTED BY A LINKER LOOP (30 REMARK 210 A.A RESIDUES LONG). REMARK 210 THE PDB FILE IS GENERATED BY SUPERIMPOSING THE N-DOMAIN (RESIDUES REMARK 210 7-56) IN WHICH CASE REMARK 210 C-DOMAIN (RESIDUES 89-120) CANNOT BE SUPERIMPOSED. THE SAME IS REMARK 210 TRUE FOR THE CASE WHERE REMARK 210 C-DOMAIN IS SUPERIMPOSED. N-DOMAIN SHOWS UP ALL OVER THE REMARK 210 SUPERIMPOSED DOMAIN. REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LYS A 6 79.15 -109.59 REMARK 500 1 ILE A 16 -83.38 -84.72 REMARK 500 1 ARG A 21 -174.46 56.89 REMARK 500 1 ARG A 22 -155.14 -169.68 REMARK 500 1 SER A 38 -73.26 -52.09 REMARK 500 1 GLU A 39 -16.69 -156.50 REMARK 500 1 ARG A 50 -45.03 -140.97 REMARK 500 1 THR A 58 83.08 -68.33 REMARK 500 1 SER A 60 99.19 -178.52 REMARK 500 1 GLN A 61 34.25 -98.55 REMARK 500 1 GLU A 65 111.28 60.72 REMARK 500 1 GLU A 70 -53.21 178.19 REMARK 500 1 SER A 74 80.18 60.58 REMARK 500 1 LYS A 78 -65.07 -157.70 REMARK 500 1 GLN A 79 92.89 60.85 REMARK 500 1 LEU A 80 -79.92 64.45 REMARK 500 1 ARG A 81 92.40 54.12 REMARK 500 1 ALA A 82 -56.11 -167.59 REMARK 500 1 ASP A 88 -61.39 -141.78 REMARK 500 1 THR A 93 -97.61 -79.94 REMARK 500 1 VAL A 94 -41.85 -142.89 REMARK 500 1 THR A 113 -70.07 -57.32 REMARK 500 1 LYS A 114 -39.87 -157.53 REMARK 500 1 PHE A 121 85.92 -55.28 REMARK 500 1 ALA A 124 37.87 -153.60 REMARK 500 1 GLU A 127 -56.78 -149.18 REMARK 500 1 LYS A 128 75.64 -165.73 REMARK 500 2 HIS A 3 -174.16 64.22 REMARK 500 2 ASP A 5 106.09 57.71 REMARK 500 2 ARG A 15 35.29 -146.85 REMARK 500 2 LYS A 17 -96.69 -153.62 REMARK 500 2 TYR A 20 -20.28 79.98 REMARK 500 2 ARG A 21 167.90 165.16 REMARK 500 2 ARG A 22 -80.27 173.19 REMARK 500 2 SER A 26 100.08 -57.31 REMARK 500 2 PHE A 27 -107.55 -55.65 REMARK 500 2 SER A 38 43.01 -85.66 REMARK 500 2 GLU A 39 -16.51 79.23 REMARK 500 2 ALA A 47 -70.77 -46.01 REMARK 500 2 ARG A 50 -42.32 -168.15 REMARK 500 2 THR A 58 39.14 -154.85 REMARK 500 2 GLN A 61 94.86 67.44 REMARK 500 2 GLU A 62 41.66 -96.28 REMARK 500 2 GLU A 65 100.90 60.91 REMARK 500 2 LYS A 69 161.94 64.83 REMARK 500 2 PRO A 71 -163.85 -56.68 REMARK 500 2 ALA A 72 -177.63 58.79 REMARK 500 2 ASP A 75 -65.63 -94.74 REMARK 500 2 GLN A 77 100.44 -164.70 REMARK 500 2 LYS A 78 -45.36 -176.13 REMARK 500 REMARK 500 THIS ENTRY HAS 605 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HI1506 RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 TWO DOMAINS: FROM FLUMU PROTEIN GP35 (HI1506) CONTAINING REMARK 999 RESIDUES 4-70, AND FROM PROTEIN HI1507 (RESIDUES 682-821), REMARK 999 ARE LINKED BY PEPTIDE OF THE SEQUENCE REMARK 999 GSDEQKQLRADPPSTDLNTFTV (RESIDUES 71-94). DBREF 2OUT A 4 70 UNP P44228 VG35_HAEIN 1 67 DBREF 2OUT A 95 131 UNP P44229 Y1507_HAEIN 2 38 SEQADV 2OUT GLY A 1 UNP P44228 EXPRESSION TAG SEQADV 2OUT SER A 2 UNP P44228 EXPRESSION TAG SEQADV 2OUT HIS A 3 UNP P44228 EXPRESSION TAG SEQADV 2OUT PRO A 71 UNP P44229 SEE REMARK 999 SEQADV 2OUT ALA A 72 UNP P44229 SEE REMARK 999 SEQADV 2OUT GLY A 73 UNP P44229 SEE REMARK 999 SEQADV 2OUT SER A 74 UNP P44229 SEE REMARK 999 SEQADV 2OUT ASP A 75 UNP P44229 SEE REMARK 999 SEQADV 2OUT GLU A 76 UNP P44229 SEE REMARK 999 SEQADV 2OUT GLN A 77 UNP P44229 SEE REMARK 999 SEQADV 2OUT LYS A 78 UNP P44229 SEE REMARK 999 SEQADV 2OUT GLN A 79 UNP P44229 SEE REMARK 999 SEQADV 2OUT LEU A 80 UNP P44229 SEE REMARK 999 SEQADV 2OUT ARG A 81 UNP P44229 SEE REMARK 999 SEQADV 2OUT ALA A 82 UNP P44229 SEE REMARK 999 SEQADV 2OUT ASP A 83 UNP P44229 SEE REMARK 999 SEQADV 2OUT PRO A 84 UNP P44229 SEE REMARK 999 SEQADV 2OUT PRO A 85 UNP P44229 SEE REMARK 999 SEQADV 2OUT SER A 86 UNP P44229 SEE REMARK 999 SEQADV 2OUT THR A 87 UNP P44229 SEE REMARK 999 SEQADV 2OUT ASP A 88 UNP P44229 SEE REMARK 999 SEQADV 2OUT LEU A 89 UNP P44229 SEE REMARK 999 SEQADV 2OUT ASN A 90 UNP P44229 SEE REMARK 999 SEQADV 2OUT THR A 91 UNP P44229 SEE REMARK 999 SEQADV 2OUT PHE A 92 UNP P44229 SEE REMARK 999 SEQADV 2OUT THR A 93 UNP P44229 SEE REMARK 999 SEQADV 2OUT VAL A 94 UNP P44229 SEE REMARK 999 SEQRES 1 A 131 GLY SER HIS MET ASP LYS THR PHE CYS VAL VAL VAL GLN SEQRES 2 A 131 ASN ARG ILE LYS GLU GLY TYR ARG ARG ALA GLY PHE SER SEQRES 3 A 131 PHE HIS LEU GLY ASP ASN SER LEU ALA ALA VAL SER GLU SEQRES 4 A 131 SER GLN LEU ALA GLN LEU LYS ALA ASP PRO ARG LEU VAL SEQRES 5 A 131 VAL GLN ILE THR GLU THR GLY SER GLN GLU GLY GLY GLU SEQRES 6 A 131 GLY LEU SER LYS GLU PRO ALA GLY SER ASP GLU GLN LYS SEQRES 7 A 131 GLN LEU ARG ALA ASP PRO PRO SER THR ASP LEU ASN THR SEQRES 8 A 131 PHE THR VAL GLU GLN LEU LYS ALA GLN LEU THR GLU ARG SEQRES 9 A 131 GLY ILE THR PHE LYS GLN SER ALA THR LYS ALA GLU LEU SEQRES 10 A 131 ILE ALA LEU PHE ALA PRO ALA ASP GLY GLU LYS SER GLU SEQRES 11 A 131 ALA HELIX 1 1 GLU A 39 ALA A 47 1 9 HELIX 2 2 VAL A 94 GLY A 105 1 12 HELIX 3 3 LYS A 114 PHE A 121 1 8 SHEET 1 A 3 ASP A 31 SER A 33 0 SHEET 2 A 3 VAL A 10 GLN A 13 -1 N VAL A 12 O ASN A 32 SHEET 3 A 3 GLN A 54 ILE A 55 -1 O GLN A 54 N VAL A 11 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1