HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 19-FEB-07 2OX7 TITLE CRYSTAL STRUCTURE OF PROTEIN EF1440 FROM ENTEROCOCCUS FAECALIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROCOCCUS FAECALIS; SOURCE 3 ORGANISM_TAXID: 226185; SOURCE 4 STRAIN: V583; SOURCE 5 ATCC: 700802; SOURCE 6 GENE: EF_1440; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)CODON+RIL; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: BC-PSGX3(BC) KEYWDS STRUCTURAL GENOMICS, HYPOTHETICAL PROTEIN, PSI, PROTEIN STRUCTURE KEYWDS 2 INITIATIVE, NEW YORK STRUCTURAL GENOMICS RESEARCH CONSORTIUM, KEYWDS 3 NYSGRC, NEW YORK SGX RESEARCH CENTER FOR STRUCTURAL GENOMICS, KEYWDS 4 NYSGXRC, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR V.N.MALASHKEVICH,R.TORO,J.M.SAUDER,K.D.SCHWINN,D.A.THOMPSON,K.T.BAIN, AUTHOR 2 J.M.ADAMS,C.REYES,C.LAU,J.GILMORE,I.ROONEY,T.GHEYI,S.R.WASSERMAN, AUTHOR 3 S.EMTAGE,S.K.BURLEY,S.C.ALMO,NEW YORK SGX RESEARCH CENTER FOR AUTHOR 4 STRUCTURAL GENOMICS (NYSGXRC) REVDAT 7 16-OCT-24 2OX7 1 REMARK REVDAT 6 03-FEB-21 2OX7 1 AUTHOR JRNL SEQADV LINK REVDAT 5 14-NOV-18 2OX7 1 AUTHOR REVDAT 4 18-OCT-17 2OX7 1 REMARK REVDAT 3 13-JUL-11 2OX7 1 VERSN REVDAT 2 24-FEB-09 2OX7 1 VERSN REVDAT 1 06-MAR-07 2OX7 0 JRNL AUTH V.N.MALASHKEVICH,R.TORO,J.M.SAUDER,D.A.THOMPSON,K.T.BAIN, JRNL AUTH 2 J.M.ADAMS,T.GHEYI,C.LAU,J.GILMORE,S.R.WASSERMAN,K.D.SCHWINN, JRNL AUTH 3 S.EMTAGE,S.K.BURLEY,S.C.ALMO JRNL TITL CRYSTAL STRUCTURE OF THE HYPOTHETICAL PROTEIN FROM JRNL TITL 2 ENTEROCOCCUS FAECALIS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.78 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.78 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.63 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 62920 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.192 REMARK 3 R VALUE (WORKING SET) : 0.190 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3366 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.78 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.83 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4466 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.44 REMARK 3 BIN R VALUE (WORKING SET) : 0.2120 REMARK 3 BIN FREE R VALUE SET COUNT : 210 REMARK 3 BIN FREE R VALUE : 0.2790 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4714 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 663 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.09 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.124 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.125 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.082 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.532 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.950 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.930 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4842 ; 0.017 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6564 ; 1.532 ; 1.945 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 570 ; 6.622 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 254 ;36.686 ;24.646 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 808 ;15.014 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 20 ;19.788 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 690 ; 0.115 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3756 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2200 ; 0.209 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3353 ; 0.320 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 540 ; 0.174 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 122 ; 0.209 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 54 ; 0.164 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2946 ; 1.465 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4628 ; 2.086 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2215 ; 3.105 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1936 ; 4.319 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2OX7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-FEB-07. REMARK 100 THE DEPOSITION ID IS D_1000041696. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-FEB-07 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 7.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 31-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97961 REMARK 200 MONOCHROMATOR : SGX-CAT REMARK 200 OPTICS : SGX-CAT REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA, CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 66447 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.777 REMARK 200 RESOLUTION RANGE LOW (A) : 25.474 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 14.40 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : 0.08000 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 6.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.78 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.87 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.1 REMARK 200 DATA REDUNDANCY IN SHELL : 12.60 REMARK 200 R MERGE FOR SHELL (I) : 0.38300 REMARK 200 R SYM FOR SHELL (I) : 0.38300 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELX, SHELXD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.36 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.34 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.0M SODIUM CHLORIDE, 10% PEG 6000, PH REMARK 280 7.50, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 32.17300 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 75.45700 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.18800 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 75.45700 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 32.17300 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 35.18800 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10030 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 29020 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -62.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 146 REMARK 465 ASN A 147 REMARK 465 GLU A 148 REMARK 465 GLY A 149 REMARK 465 HIS A 150 REMARK 465 HIS A 151 REMARK 465 HIS A 152 REMARK 465 HIS A 153 REMARK 465 HIS A 154 REMARK 465 HIS A 155 REMARK 465 MET B 1 REMARK 465 GLY B 146 REMARK 465 ASN B 147 REMARK 465 GLU B 148 REMARK 465 GLY B 149 REMARK 465 HIS B 150 REMARK 465 HIS B 151 REMARK 465 HIS B 152 REMARK 465 HIS B 153 REMARK 465 HIS B 154 REMARK 465 HIS B 155 REMARK 465 MET C 1 REMARK 465 GLU C 145 REMARK 465 GLY C 146 REMARK 465 ASN C 147 REMARK 465 GLU C 148 REMARK 465 GLY C 149 REMARK 465 HIS C 150 REMARK 465 HIS C 151 REMARK 465 HIS C 152 REMARK 465 HIS C 153 REMARK 465 HIS C 154 REMARK 465 HIS C 155 REMARK 465 MET D 1 REMARK 465 GLU D 145 REMARK 465 GLY D 146 REMARK 465 ASN D 147 REMARK 465 GLU D 148 REMARK 465 GLY D 149 REMARK 465 HIS D 150 REMARK 465 HIS D 151 REMARK 465 HIS D 152 REMARK 465 HIS D 153 REMARK 465 HIS D 154 REMARK 465 HIS D 155 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH C 161 O HOH C 335 1.89 REMARK 500 NH2 ARG B 110 O HOH B 348 2.03 REMARK 500 O HOH A 171 O HOH A 255 2.08 REMARK 500 O HOH B 348 O HOH C 189 2.12 REMARK 500 O HOH C 258 O HOH C 325 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 MSE C 101 SE MSE C 101 CE -0.453 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 110 NE - CZ - NH2 ANGL. DEV. = -3.0 DEGREES REMARK 500 ARG B 8 NE - CZ - NH1 ANGL. DEV. = -3.1 DEGREES REMARK 500 ARG B 110 NE - CZ - NH2 ANGL. DEV. = -3.7 DEGREES REMARK 500 MSE C 101 CG - SE - CE ANGL. DEV. = -13.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 44 131.93 -38.84 REMARK 500 THR A 46 55.10 -144.58 REMARK 500 PRO A 64 37.65 -88.71 REMARK 500 ARG A 128 -121.88 52.83 REMARK 500 ARG B 128 -122.31 55.55 REMARK 500 ARG C 128 -135.23 60.44 REMARK 500 SER D 43 84.47 -169.00 REMARK 500 PRO D 64 31.46 -90.68 REMARK 500 ASP D 90 47.87 -90.62 REMARK 500 LYS D 93 98.79 -64.20 REMARK 500 TYR D 95 125.37 -34.73 REMARK 500 ARG D 128 -119.79 53.70 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: NYSGXRC-10427A RELATED DB: TARGETDB DBREF 2OX7 A 4 147 UNP Q835D7 Q835D7_ENTFA 2 145 DBREF 2OX7 B 4 147 UNP Q835D7 Q835D7_ENTFA 2 145 DBREF 2OX7 C 4 147 UNP Q835D7 Q835D7_ENTFA 2 145 DBREF 2OX7 D 4 147 UNP Q835D7 Q835D7_ENTFA 2 145 SEQADV 2OX7 MET A 1 UNP Q835D7 CLONING ARTIFACT SEQADV 2OX7 SER A 2 UNP Q835D7 CLONING ARTIFACT SEQADV 2OX7 LEU A 3 UNP Q835D7 CLONING ARTIFACT SEQADV 2OX7 MSE A 17 UNP Q835D7 MET 15 MODIFIED RESIDUE SEQADV 2OX7 MSE A 31 UNP Q835D7 MET 29 MODIFIED RESIDUE SEQADV 2OX7 MSE A 68 UNP Q835D7 MET 66 MODIFIED RESIDUE SEQADV 2OX7 MSE A 101 UNP Q835D7 MET 99 MODIFIED RESIDUE SEQADV 2OX7 GLU A 148 UNP Q835D7 CLONING ARTIFACT SEQADV 2OX7 GLY A 149 UNP Q835D7 CLONING ARTIFACT SEQADV 2OX7 HIS A 150 UNP Q835D7 CLONING ARTIFACT SEQADV 2OX7 HIS A 151 UNP Q835D7 CLONING ARTIFACT SEQADV 2OX7 HIS A 152 UNP Q835D7 CLONING ARTIFACT SEQADV 2OX7 HIS A 153 UNP Q835D7 CLONING ARTIFACT SEQADV 2OX7 HIS A 154 UNP Q835D7 CLONING ARTIFACT SEQADV 2OX7 HIS A 155 UNP Q835D7 CLONING ARTIFACT SEQADV 2OX7 MET B 1 UNP Q835D7 CLONING ARTIFACT SEQADV 2OX7 SER B 2 UNP Q835D7 CLONING ARTIFACT SEQADV 2OX7 LEU B 3 UNP Q835D7 CLONING ARTIFACT SEQADV 2OX7 MSE B 17 UNP Q835D7 MET 15 MODIFIED RESIDUE SEQADV 2OX7 MSE B 31 UNP Q835D7 MET 29 MODIFIED RESIDUE SEQADV 2OX7 MSE B 68 UNP Q835D7 MET 66 MODIFIED RESIDUE SEQADV 2OX7 MSE B 101 UNP Q835D7 MET 99 MODIFIED RESIDUE SEQADV 2OX7 GLU B 148 UNP Q835D7 CLONING ARTIFACT SEQADV 2OX7 GLY B 149 UNP Q835D7 CLONING ARTIFACT SEQADV 2OX7 HIS B 150 UNP Q835D7 CLONING ARTIFACT SEQADV 2OX7 HIS B 151 UNP Q835D7 CLONING ARTIFACT SEQADV 2OX7 HIS B 152 UNP Q835D7 CLONING ARTIFACT SEQADV 2OX7 HIS B 153 UNP Q835D7 CLONING ARTIFACT SEQADV 2OX7 HIS B 154 UNP Q835D7 CLONING ARTIFACT SEQADV 2OX7 HIS B 155 UNP Q835D7 CLONING ARTIFACT SEQADV 2OX7 MET C 1 UNP Q835D7 CLONING ARTIFACT SEQADV 2OX7 SER C 2 UNP Q835D7 CLONING ARTIFACT SEQADV 2OX7 LEU C 3 UNP Q835D7 CLONING ARTIFACT SEQADV 2OX7 MSE C 17 UNP Q835D7 MET 15 MODIFIED RESIDUE SEQADV 2OX7 MSE C 31 UNP Q835D7 MET 29 MODIFIED RESIDUE SEQADV 2OX7 MSE C 68 UNP Q835D7 MET 66 MODIFIED RESIDUE SEQADV 2OX7 MSE C 101 UNP Q835D7 MET 99 MODIFIED RESIDUE SEQADV 2OX7 GLU C 148 UNP Q835D7 CLONING ARTIFACT SEQADV 2OX7 GLY C 149 UNP Q835D7 CLONING ARTIFACT SEQADV 2OX7 HIS C 150 UNP Q835D7 CLONING ARTIFACT SEQADV 2OX7 HIS C 151 UNP Q835D7 CLONING ARTIFACT SEQADV 2OX7 HIS C 152 UNP Q835D7 CLONING ARTIFACT SEQADV 2OX7 HIS C 153 UNP Q835D7 CLONING ARTIFACT SEQADV 2OX7 HIS C 154 UNP Q835D7 CLONING ARTIFACT SEQADV 2OX7 HIS C 155 UNP Q835D7 CLONING ARTIFACT SEQADV 2OX7 MET D 1 UNP Q835D7 CLONING ARTIFACT SEQADV 2OX7 SER D 2 UNP Q835D7 CLONING ARTIFACT SEQADV 2OX7 LEU D 3 UNP Q835D7 CLONING ARTIFACT SEQADV 2OX7 MSE D 17 UNP Q835D7 MET 15 MODIFIED RESIDUE SEQADV 2OX7 MSE D 31 UNP Q835D7 MET 29 MODIFIED RESIDUE SEQADV 2OX7 MSE D 68 UNP Q835D7 MET 66 MODIFIED RESIDUE SEQADV 2OX7 MSE D 101 UNP Q835D7 MET 99 MODIFIED RESIDUE SEQADV 2OX7 GLU D 148 UNP Q835D7 CLONING ARTIFACT SEQADV 2OX7 GLY D 149 UNP Q835D7 CLONING ARTIFACT SEQADV 2OX7 HIS D 150 UNP Q835D7 CLONING ARTIFACT SEQADV 2OX7 HIS D 151 UNP Q835D7 CLONING ARTIFACT SEQADV 2OX7 HIS D 152 UNP Q835D7 CLONING ARTIFACT SEQADV 2OX7 HIS D 153 UNP Q835D7 CLONING ARTIFACT SEQADV 2OX7 HIS D 154 UNP Q835D7 CLONING ARTIFACT SEQADV 2OX7 HIS D 155 UNP Q835D7 CLONING ARTIFACT SEQRES 1 A 155 MET SER LEU ILE PRO LYS PHE ARG ALA TRP ASP THR TYR SEQRES 2 A 155 GLU LYS GLU MSE LEU GLU ASN VAL THR PRO LEU PHE ASP SEQRES 3 A 155 ASP SER ASN SER MSE ILE ALA ILE ILE THR ASP PHE GLN SEQRES 4 A 155 ILE LYS GLY SER PRO GLY THR SER GLU ILE GLU ILE GLY SEQRES 5 A 155 SER TYR ASP THR THR PHE ASN TRP ASP GLU PHE PRO TYR SEQRES 6 A 155 VAL ILE MSE GLN SER THR GLY LEU LYS ASP LYS ASN GLY SEQRES 7 A 155 VAL GLU ILE PHE GLU GLY ASP ILE LEU VAL TYR ASP ALA SEQRES 8 A 155 PRO LYS LYS TYR ALA HIS ARG ARG SER MSE HIS GLU ILE SEQRES 9 A 155 ALA TYR ALA ASP GLY ARG PHE PHE TRP GLU PHE LEU ASP SEQRES 10 A 155 LEU VAL PHE CYS GLN SER ASN ILE LEU TYR ARG ASP GLY SEQRES 11 A 155 TYR LEU VAL ILE GLY ASN ILE HIS GLU ASN PRO GLU LEU SEQRES 12 A 155 LEU GLU GLY ASN GLU GLY HIS HIS HIS HIS HIS HIS SEQRES 1 B 155 MET SER LEU ILE PRO LYS PHE ARG ALA TRP ASP THR TYR SEQRES 2 B 155 GLU LYS GLU MSE LEU GLU ASN VAL THR PRO LEU PHE ASP SEQRES 3 B 155 ASP SER ASN SER MSE ILE ALA ILE ILE THR ASP PHE GLN SEQRES 4 B 155 ILE LYS GLY SER PRO GLY THR SER GLU ILE GLU ILE GLY SEQRES 5 B 155 SER TYR ASP THR THR PHE ASN TRP ASP GLU PHE PRO TYR SEQRES 6 B 155 VAL ILE MSE GLN SER THR GLY LEU LYS ASP LYS ASN GLY SEQRES 7 B 155 VAL GLU ILE PHE GLU GLY ASP ILE LEU VAL TYR ASP ALA SEQRES 8 B 155 PRO LYS LYS TYR ALA HIS ARG ARG SER MSE HIS GLU ILE SEQRES 9 B 155 ALA TYR ALA ASP GLY ARG PHE PHE TRP GLU PHE LEU ASP SEQRES 10 B 155 LEU VAL PHE CYS GLN SER ASN ILE LEU TYR ARG ASP GLY SEQRES 11 B 155 TYR LEU VAL ILE GLY ASN ILE HIS GLU ASN PRO GLU LEU SEQRES 12 B 155 LEU GLU GLY ASN GLU GLY HIS HIS HIS HIS HIS HIS SEQRES 1 C 155 MET SER LEU ILE PRO LYS PHE ARG ALA TRP ASP THR TYR SEQRES 2 C 155 GLU LYS GLU MSE LEU GLU ASN VAL THR PRO LEU PHE ASP SEQRES 3 C 155 ASP SER ASN SER MSE ILE ALA ILE ILE THR ASP PHE GLN SEQRES 4 C 155 ILE LYS GLY SER PRO GLY THR SER GLU ILE GLU ILE GLY SEQRES 5 C 155 SER TYR ASP THR THR PHE ASN TRP ASP GLU PHE PRO TYR SEQRES 6 C 155 VAL ILE MSE GLN SER THR GLY LEU LYS ASP LYS ASN GLY SEQRES 7 C 155 VAL GLU ILE PHE GLU GLY ASP ILE LEU VAL TYR ASP ALA SEQRES 8 C 155 PRO LYS LYS TYR ALA HIS ARG ARG SER MSE HIS GLU ILE SEQRES 9 C 155 ALA TYR ALA ASP GLY ARG PHE PHE TRP GLU PHE LEU ASP SEQRES 10 C 155 LEU VAL PHE CYS GLN SER ASN ILE LEU TYR ARG ASP GLY SEQRES 11 C 155 TYR LEU VAL ILE GLY ASN ILE HIS GLU ASN PRO GLU LEU SEQRES 12 C 155 LEU GLU GLY ASN GLU GLY HIS HIS HIS HIS HIS HIS SEQRES 1 D 155 MET SER LEU ILE PRO LYS PHE ARG ALA TRP ASP THR TYR SEQRES 2 D 155 GLU LYS GLU MSE LEU GLU ASN VAL THR PRO LEU PHE ASP SEQRES 3 D 155 ASP SER ASN SER MSE ILE ALA ILE ILE THR ASP PHE GLN SEQRES 4 D 155 ILE LYS GLY SER PRO GLY THR SER GLU ILE GLU ILE GLY SEQRES 5 D 155 SER TYR ASP THR THR PHE ASN TRP ASP GLU PHE PRO TYR SEQRES 6 D 155 VAL ILE MSE GLN SER THR GLY LEU LYS ASP LYS ASN GLY SEQRES 7 D 155 VAL GLU ILE PHE GLU GLY ASP ILE LEU VAL TYR ASP ALA SEQRES 8 D 155 PRO LYS LYS TYR ALA HIS ARG ARG SER MSE HIS GLU ILE SEQRES 9 D 155 ALA TYR ALA ASP GLY ARG PHE PHE TRP GLU PHE LEU ASP SEQRES 10 D 155 LEU VAL PHE CYS GLN SER ASN ILE LEU TYR ARG ASP GLY SEQRES 11 D 155 TYR LEU VAL ILE GLY ASN ILE HIS GLU ASN PRO GLU LEU SEQRES 12 D 155 LEU GLU GLY ASN GLU GLY HIS HIS HIS HIS HIS HIS MODRES 2OX7 MSE A 17 MET SELENOMETHIONINE MODRES 2OX7 MSE A 31 MET SELENOMETHIONINE MODRES 2OX7 MSE A 68 MET SELENOMETHIONINE MODRES 2OX7 MSE A 101 MET SELENOMETHIONINE MODRES 2OX7 MSE B 17 MET SELENOMETHIONINE MODRES 2OX7 MSE B 31 MET SELENOMETHIONINE MODRES 2OX7 MSE B 68 MET SELENOMETHIONINE MODRES 2OX7 MSE B 101 MET SELENOMETHIONINE MODRES 2OX7 MSE C 17 MET SELENOMETHIONINE MODRES 2OX7 MSE C 31 MET SELENOMETHIONINE MODRES 2OX7 MSE C 68 MET SELENOMETHIONINE MODRES 2OX7 MSE C 101 MET SELENOMETHIONINE MODRES 2OX7 MSE D 17 MET SELENOMETHIONINE MODRES 2OX7 MSE D 31 MET SELENOMETHIONINE MODRES 2OX7 MSE D 68 MET SELENOMETHIONINE MODRES 2OX7 MSE D 101 MET SELENOMETHIONINE HET MSE A 17 8 HET MSE A 31 8 HET MSE A 68 8 HET MSE A 101 8 HET MSE B 17 8 HET MSE B 31 8 HET MSE B 68 8 HET MSE B 101 8 HET MSE C 17 8 HET MSE C 31 8 HET MSE C 68 8 HET MSE C 101 8 HET MSE D 17 8 HET MSE D 31 8 HET MSE D 68 8 HET MSE D 101 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 16(C5 H11 N O2 SE) FORMUL 5 HOH *663(H2 O) HELIX 1 1 PHE A 58 TRP A 60 5 3 HELIX 2 2 CYS A 121 TYR A 127 1 7 HELIX 3 3 PHE B 58 TRP B 60 5 3 HELIX 4 4 CYS B 121 TYR B 127 1 7 HELIX 5 5 ASN B 140 GLU B 145 5 6 HELIX 6 6 PHE C 58 TRP C 60 5 3 HELIX 7 7 CYS C 121 TYR C 127 1 7 HELIX 8 8 PHE D 58 TRP D 60 5 3 HELIX 9 9 CYS D 121 TYR D 127 1 7 SHEET 1 A 6 TYR A 54 THR A 56 0 SHEET 2 A 6 MSE A 31 ILE A 35 -1 N ILE A 34 O ASP A 55 SHEET 3 A 6 GLU A 16 PHE A 25 -1 N THR A 22 O ILE A 35 SHEET 4 A 6 PHE A 7 ASP A 11 -1 N ALA A 9 O LEU A 18 SHEET 5 A 6 TYR A 65 LYS A 74 -1 O MSE A 68 N ARG A 8 SHEET 6 A 6 GLU A 80 PHE A 82 -1 O ILE A 81 N LEU A 73 SHEET 1 B 2 PHE A 38 SER A 43 0 SHEET 2 B 2 THR A 46 ILE A 51 -1 O THR A 46 N SER A 43 SHEET 1 C 4 ARG A 110 TRP A 113 0 SHEET 2 C 4 MSE A 101 ALA A 107 -1 N ALA A 105 O PHE A 112 SHEET 3 C 4 ASP A 85 TYR A 89 -1 N LEU A 87 O HIS A 102 SHEET 4 C 4 TYR A 131 ASN A 136 -1 O GLY A 135 N ILE A 86 SHEET 1 D 6 THR B 46 THR B 56 0 SHEET 2 D 6 MSE B 31 SER B 43 -1 N GLN B 39 O GLU B 50 SHEET 3 D 6 GLU B 16 PHE B 25 -1 N LEU B 24 O ALA B 33 SHEET 4 D 6 PHE B 7 ASP B 11 -1 N ALA B 9 O LEU B 18 SHEET 5 D 6 TYR B 65 LYS B 74 -1 O MSE B 68 N ARG B 8 SHEET 6 D 6 GLU B 80 PHE B 82 -1 O ILE B 81 N THR B 71 SHEET 1 E 4 ARG B 110 TRP B 113 0 SHEET 2 E 4 HIS B 102 ALA B 107 -1 N ALA B 107 O ARG B 110 SHEET 3 E 4 ASP B 85 TYR B 89 -1 N LEU B 87 O HIS B 102 SHEET 4 E 4 TYR B 131 ASN B 136 -1 O ILE B 134 N ILE B 86 SHEET 1 F 6 GLU C 48 THR C 56 0 SHEET 2 F 6 MSE C 31 LYS C 41 -1 N GLN C 39 O GLU C 50 SHEET 3 F 6 GLU C 16 PHE C 25 -1 N THR C 22 O ILE C 35 SHEET 4 F 6 PHE C 7 ASP C 11 -1 N ALA C 9 O LEU C 18 SHEET 5 F 6 TYR C 65 LYS C 74 -1 O MSE C 68 N ARG C 8 SHEET 6 F 6 GLU C 80 PHE C 82 -1 O ILE C 81 N LEU C 73 SHEET 1 G 4 ARG C 110 TRP C 113 0 SHEET 2 G 4 HIS C 102 ALA C 107 -1 N ALA C 105 O PHE C 112 SHEET 3 G 4 ASP C 85 TYR C 89 -1 N LEU C 87 O HIS C 102 SHEET 4 G 4 TYR C 131 ASN C 136 -1 O GLY C 135 N ILE C 86 SHEET 1 H 6 ILE D 49 THR D 56 0 SHEET 2 H 6 MSE D 31 ILE D 40 -1 N GLN D 39 O GLU D 50 SHEET 3 H 6 GLU D 16 PHE D 25 -1 N LEU D 24 O ILE D 32 SHEET 4 H 6 PHE D 7 ASP D 11 -1 N ALA D 9 O LEU D 18 SHEET 5 H 6 TYR D 65 LYS D 74 -1 O MSE D 68 N ARG D 8 SHEET 6 H 6 GLU D 80 PHE D 82 -1 O ILE D 81 N THR D 71 SHEET 1 I 4 ARG D 110 TRP D 113 0 SHEET 2 I 4 MSE D 101 ALA D 107 -1 N ALA D 107 O ARG D 110 SHEET 3 I 4 ASP D 85 TYR D 89 -1 N LEU D 87 O HIS D 102 SHEET 4 I 4 TYR D 131 ASN D 136 -1 O ILE D 134 N ILE D 86 LINK C GLU A 16 N MSE A 17 1555 1555 1.33 LINK C MSE A 17 N LEU A 18 1555 1555 1.32 LINK C SER A 30 N MSE A 31 1555 1555 1.33 LINK C MSE A 31 N ILE A 32 1555 1555 1.33 LINK C ILE A 67 N MSE A 68 1555 1555 1.34 LINK C MSE A 68 N GLN A 69 1555 1555 1.34 LINK C SER A 100 N MSE A 101 1555 1555 1.32 LINK C MSE A 101 N HIS A 102 1555 1555 1.33 LINK C GLU B 16 N MSE B 17 1555 1555 1.34 LINK C MSE B 17 N LEU B 18 1555 1555 1.33 LINK C SER B 30 N MSE B 31 1555 1555 1.34 LINK C MSE B 31 N ILE B 32 1555 1555 1.33 LINK C ILE B 67 N MSE B 68 1555 1555 1.33 LINK C MSE B 68 N GLN B 69 1555 1555 1.34 LINK C SER B 100 N MSE B 101 1555 1555 1.33 LINK C MSE B 101 N HIS B 102 1555 1555 1.33 LINK C GLU C 16 N MSE C 17 1555 1555 1.32 LINK C MSE C 17 N LEU C 18 1555 1555 1.33 LINK C SER C 30 N MSE C 31 1555 1555 1.33 LINK C MSE C 31 N ILE C 32 1555 1555 1.32 LINK C ILE C 67 N MSE C 68 1555 1555 1.33 LINK C MSE C 68 N GLN C 69 1555 1555 1.35 LINK C SER C 100 N MSE C 101 1555 1555 1.33 LINK C MSE C 101 N HIS C 102 1555 1555 1.33 LINK C GLU D 16 N MSE D 17 1555 1555 1.33 LINK C MSE D 17 N LEU D 18 1555 1555 1.33 LINK C SER D 30 N MSE D 31 1555 1555 1.32 LINK C MSE D 31 N ILE D 32 1555 1555 1.32 LINK C ILE D 67 N MSE D 68 1555 1555 1.33 LINK C MSE D 68 N GLN D 69 1555 1555 1.34 LINK C SER D 100 N MSE D 101 1555 1555 1.33 LINK C MSE D 101 N HIS D 102 1555 1555 1.34 CISPEP 1 SER C 43 PRO C 44 0 4.56 CISPEP 2 GLY C 45 THR C 46 0 6.99 CISPEP 3 SER D 43 PRO D 44 0 -26.42 CRYST1 64.346 70.376 150.914 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015541 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014209 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006626 0.00000