data_2OYT # _entry.id 2OYT # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.377 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2OYT pdb_00002oyt 10.2210/pdb2oyt/pdb NDB PD0980 ? ? RCSB RCSB041753 ? ? WWPDB D_1000041753 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 2OXM _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 2OYT _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2007-02-22 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Bianchet, M.A.' 1 'Krosky, D.J.' 2 'Stivers, J.T.' 3 'Amzel, L.M.' 4 # _citation.id primary _citation.title 'Enzymatic capture of an extrahelical thymine in the search for uracil in DNA.' _citation.journal_abbrev Nature _citation.journal_volume 449 _citation.page_first 433 _citation.page_last 437 _citation.year 2007 _citation.journal_id_ASTM NATUAS _citation.country UK _citation.journal_id_ISSN 0028-0836 _citation.journal_id_CSD 0006 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17704764 _citation.pdbx_database_id_DOI 10.1038/nature06131 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Parker, J.B.' 1 ? primary 'Bianchet, M.A.' 2 ? primary 'Krosky, D.J.' 3 ? primary 'Friedman, J.I.' 4 ? primary 'Amzel, L.M.' 5 ? primary 'Stivers, J.T.' 6 ? # _cell.length_a 48.499 _cell.length_b 66.318 _cell.length_c 100.316 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 2OYT _cell.pdbx_unique_axis ? _cell.Z_PDB 4 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.entry_id 2OYT _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 19 _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Uracil-DNA glycosylase' 25544.137 1 3.2.2.- ? ? ? 2 polymer syn 'DNA strand1' 2603.696 1 ? ? ? ? 3 polymer syn 'DNA strand2' 3066.118 1 ? ? ? ? 4 water nat water 18.015 398 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name UDG # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MEFFGESWKKHLSGEFGKPYFIKLMGFVAEERKHYTVYPPPHQVFTWTQMCDIKDVKVVILGQDPYHGPNQAHGLCFSVQ RPVPPPPSLENIYKELSTDIEDFVHPGHGDLSGWAKQGVLLLNAVLTVRAHQANSHKERGWEQFTDAVVSWLNQNSNGLV FLLWGSYAQKKGSAIDRKRHHVLQTAHPSPLSVYRGFFGCRHFSKTNELLQKSGKKPIDWKEL ; ;MEFFGESWKKHLSGEFGKPYFIKLMGFVAEERKHYTVYPPPHQVFTWTQMCDIKDVKVVILGQDPYHGPNQAHGLCFSVQ RPVPPPPSLENIYKELSTDIEDFVHPGHGDLSGWAKQGVLLLNAVLTVRAHQANSHKERGWEQFTDAVVSWLNQNSNGLV FLLWGSYAQKKGSAIDRKRHHVLQTAHPSPLSVYRGFFGCRHFSKTNELLQKSGKKPIDWKEL ; A ? 2 polydeoxyribonucleotide no yes '(DT)(DG)(DT)(AAB)(DA)(DT)(DC)(DT)(DT)' TGTXATCTT B ? 3 polydeoxyribonucleotide no yes '(DA)(DA)(DA)(DG)(DA)(DT)(4MF)(DA)(DC)(DA)' AAAGATNACA C ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLU n 1 3 PHE n 1 4 PHE n 1 5 GLY n 1 6 GLU n 1 7 SER n 1 8 TRP n 1 9 LYS n 1 10 LYS n 1 11 HIS n 1 12 LEU n 1 13 SER n 1 14 GLY n 1 15 GLU n 1 16 PHE n 1 17 GLY n 1 18 LYS n 1 19 PRO n 1 20 TYR n 1 21 PHE n 1 22 ILE n 1 23 LYS n 1 24 LEU n 1 25 MET n 1 26 GLY n 1 27 PHE n 1 28 VAL n 1 29 ALA n 1 30 GLU n 1 31 GLU n 1 32 ARG n 1 33 LYS n 1 34 HIS n 1 35 TYR n 1 36 THR n 1 37 VAL n 1 38 TYR n 1 39 PRO n 1 40 PRO n 1 41 PRO n 1 42 HIS n 1 43 GLN n 1 44 VAL n 1 45 PHE n 1 46 THR n 1 47 TRP n 1 48 THR n 1 49 GLN n 1 50 MET n 1 51 CYS n 1 52 ASP n 1 53 ILE n 1 54 LYS n 1 55 ASP n 1 56 VAL n 1 57 LYS n 1 58 VAL n 1 59 VAL n 1 60 ILE n 1 61 LEU n 1 62 GLY n 1 63 GLN n 1 64 ASP n 1 65 PRO n 1 66 TYR n 1 67 HIS n 1 68 GLY n 1 69 PRO n 1 70 ASN n 1 71 GLN n 1 72 ALA n 1 73 HIS n 1 74 GLY n 1 75 LEU n 1 76 CYS n 1 77 PHE n 1 78 SER n 1 79 VAL n 1 80 GLN n 1 81 ARG n 1 82 PRO n 1 83 VAL n 1 84 PRO n 1 85 PRO n 1 86 PRO n 1 87 PRO n 1 88 SER n 1 89 LEU n 1 90 GLU n 1 91 ASN n 1 92 ILE n 1 93 TYR n 1 94 LYS n 1 95 GLU n 1 96 LEU n 1 97 SER n 1 98 THR n 1 99 ASP n 1 100 ILE n 1 101 GLU n 1 102 ASP n 1 103 PHE n 1 104 VAL n 1 105 HIS n 1 106 PRO n 1 107 GLY n 1 108 HIS n 1 109 GLY n 1 110 ASP n 1 111 LEU n 1 112 SER n 1 113 GLY n 1 114 TRP n 1 115 ALA n 1 116 LYS n 1 117 GLN n 1 118 GLY n 1 119 VAL n 1 120 LEU n 1 121 LEU n 1 122 LEU n 1 123 ASN n 1 124 ALA n 1 125 VAL n 1 126 LEU n 1 127 THR n 1 128 VAL n 1 129 ARG n 1 130 ALA n 1 131 HIS n 1 132 GLN n 1 133 ALA n 1 134 ASN n 1 135 SER n 1 136 HIS n 1 137 LYS n 1 138 GLU n 1 139 ARG n 1 140 GLY n 1 141 TRP n 1 142 GLU n 1 143 GLN n 1 144 PHE n 1 145 THR n 1 146 ASP n 1 147 ALA n 1 148 VAL n 1 149 VAL n 1 150 SER n 1 151 TRP n 1 152 LEU n 1 153 ASN n 1 154 GLN n 1 155 ASN n 1 156 SER n 1 157 ASN n 1 158 GLY n 1 159 LEU n 1 160 VAL n 1 161 PHE n 1 162 LEU n 1 163 LEU n 1 164 TRP n 1 165 GLY n 1 166 SER n 1 167 TYR n 1 168 ALA n 1 169 GLN n 1 170 LYS n 1 171 LYS n 1 172 GLY n 1 173 SER n 1 174 ALA n 1 175 ILE n 1 176 ASP n 1 177 ARG n 1 178 LYS n 1 179 ARG n 1 180 HIS n 1 181 HIS n 1 182 VAL n 1 183 LEU n 1 184 GLN n 1 185 THR n 1 186 ALA n 1 187 HIS n 1 188 PRO n 1 189 SER n 1 190 PRO n 1 191 LEU n 1 192 SER n 1 193 VAL n 1 194 TYR n 1 195 ARG n 1 196 GLY n 1 197 PHE n 1 198 PHE n 1 199 GLY n 1 200 CYS n 1 201 ARG n 1 202 HIS n 1 203 PHE n 1 204 SER n 1 205 LYS n 1 206 THR n 1 207 ASN n 1 208 GLU n 1 209 LEU n 1 210 LEU n 1 211 GLN n 1 212 LYS n 1 213 SER n 1 214 GLY n 1 215 LYS n 1 216 LYS n 1 217 PRO n 1 218 ILE n 1 219 ASP n 1 220 TRP n 1 221 LYS n 1 222 GLU n 1 223 LEU n 2 1 DT n 2 2 DG n 2 3 DT n 2 4 AAB n 2 5 DA n 2 6 DT n 2 7 DC n 2 8 DT n 2 9 DT n 3 1 DA n 3 2 DA n 3 3 DA n 3 4 DG n 3 5 DA n 3 6 DT n 3 7 4MF n 3 8 DA n 3 9 DC n 3 10 DA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene 'UNG, DGU, UNG1, UNG15' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 PDB 2OYT 2OYT 2 'TGT(AAB)ATCTT' 1 ? 2 PDB 2OYT 2OYT 3 'AAAGAT(4MF)ACA' 1 ? 3 UNP UNG_HUMAN P13051 1 ;FGESWKKHLSGEFGKPYFIKLMGFVAEERKHYTVYPPPHQVFTWTQMCDIKDVKVVILGQDPYHGPNQAHGLCFSVQRPV PPPPSLENIYKELSTDIEDFVHPGHGDLSGWAKQGVLLLNAVLTVRAHQANSHKERGWEQFTDAVVSWLNQNSNGLVFLL WGSYAQKKGSAIDRKRHHVLQTAHPSPLSVYRGFFGCRHFSKTNELLQKSGKKPIDWKEL ; 94 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2OYT B 1 ? 9 ? 2OYT 2 ? 10 ? 2 10 2 2 2OYT C 1 ? 10 ? 2OYT 21 ? 30 ? 21 30 3 3 2OYT A 4 ? 223 ? P13051 94 ? 313 ? 85 304 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 3 2OYT MET A 1 ? UNP P13051 ? ? 'expression tag' 82 1 3 2OYT GLU A 2 ? UNP P13051 ? ? 'expression tag' 83 2 3 2OYT PHE A 3 ? UNP P13051 ? ? 'expression tag' 84 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 4MF 'DNA linking' . '1-(2-DEOXY-5-O-PHOSPHONO-BETA-D-ERYTHRO-PENTOFURANOSYL)-4-METHYL-1H-INDOLE' ? 'C14 H18 N O6 P' 327.270 AAB 'DNA linking' . "2'-DEOXY-RIBOFURANOSE-5'-MONOPHOSPHATE" 'ABASIC DEOXYRIBOSE' 'C5 H11 O7 P' 214.110 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 2OYT _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.57 _exptl_crystal.density_percent_sol 52.11 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 7 _exptl_crystal_grow.temp 298 _exptl_crystal_grow.pdbx_details ;Recombinat human UNG2 (22 mg/ml) in 50 mM tris-OAc buffer pH 7.0, 150 mM NaCl and 1mM DTT was mixed with T/M DNA duplex (2.5 mM) inclubate at room T for 30 min and then centrifugate at 10000 g for 5 min. Co-crystallization conditions 22-25% PEG 4000, 10mM Hepes pH 6.5, 1mM DTT, 0.5 % v/v dioxane, VAPOR DIFFUSION, HANGING DROP, temperature 298K ; _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.details 1 1 1 'tris-OAc buffer' ? ? ? 1 2 1 NaCl ? ? ? 1 3 1 DTT ? ? ? 1 4 1 'PEG 4000' ? ? ? 1 5 1 Hepes ? ? ? 1 6 1 dioxane ? ? ? 1 7 2 'PEG 4000' ? ? ? 1 8 2 Hepes ? ? ? 1 9 2 dioxane ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV' _diffrn_detector.pdbx_collection_date 2006-01-01 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator MIRRORS _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RU300' _diffrn_source.pdbx_wavelength_list 1.5418 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? # _reflns.entry_id 2OYT _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.d_resolution_high 2.0 _reflns.d_resolution_low 36.47 _reflns.number_all ? _reflns.number_obs 20504 _reflns.percent_possible_obs 90.4 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.066 _reflns.pdbx_netI_over_sigmaI 43.7 _reflns.B_iso_Wilson_estimate 29.9 _reflns.pdbx_redundancy 5.8 _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.0 _reflns_shell.d_res_low 2.07 _reflns_shell.percent_possible_obs ? _reflns_shell.percent_possible_all 55.4 _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_obs 6.36 _reflns_shell.pdbx_Rsym_value 0.247 _reflns_shell.pdbx_redundancy 3.6 _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 2OYT _refine.ls_d_res_high 2.000 _refine.ls_d_res_low 36.470 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 90.740 _refine.ls_number_reflns_obs 20446 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.ls_R_factor_obs 0.194 _refine.ls_R_factor_R_work 0.192 _refine.ls_R_factor_R_free 0.238 _refine.ls_percent_reflns_R_free 5.000 _refine.ls_number_reflns_R_free 1019 _refine.B_iso_mean 28.728 _refine.aniso_B[1][1] -2.010 _refine.aniso_B[2][2] 0.720 _refine.aniso_B[3][3] 1.290 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.946 _refine.correlation_coeff_Fo_to_Fc_free 0.927 _refine.pdbx_overall_ESU_R 0.215 _refine.pdbx_overall_ESU_R_Free 0.182 _refine.overall_SU_ML 0.083 _refine.overall_SU_B 2.872 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_all 0.194 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 1EMH _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1808 _refine_hist.pdbx_number_atoms_nucleic_acid 376 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 398 _refine_hist.number_atoms_total 2582 _refine_hist.d_res_high 2.000 _refine_hist.d_res_low 36.470 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 2290 0.007 0.021 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 3165 1.209 2.143 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 222 5.172 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 89 39.605 23.708 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 307 12.376 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 8 3.850 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 329 0.066 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1640 0.003 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 1076 0.170 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 1482 0.299 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 367 0.108 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 35 0.242 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 30 0.120 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1144 0.353 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1796 0.592 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 1418 0.777 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 1369 1.241 4.500 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 2.000 _refine_ls_shell.d_res_low 2.052 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 54.220 _refine_ls_shell.number_reflns_R_work 837 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.208 _refine_ls_shell.R_factor_R_free 0.263 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 49 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs 886 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2OYT _struct.title 'Crystal Structure of UNG2/DNA(TM)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2OYT _struct_keywords.text 'Enzyme-DNA complex, UNG2, hydrolase-DNA COMPLEX' _struct_keywords.pdbx_keywords hydrolase/DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 5 ? SER A 13 ? GLY A 86 SER A 94 1 ? 9 HELX_P HELX_P2 2 GLY A 14 ? PHE A 16 ? GLY A 95 PHE A 97 5 ? 3 HELX_P HELX_P3 3 LYS A 18 ? TYR A 35 ? LYS A 99 TYR A 116 1 ? 18 HELX_P HELX_P4 4 PRO A 40 ? VAL A 44 ? PRO A 121 VAL A 125 5 ? 5 HELX_P HELX_P5 5 PHE A 45 ? GLN A 49 ? PHE A 126 GLN A 130 5 ? 5 HELX_P HELX_P6 6 ASP A 52 ? VAL A 56 ? ASP A 133 VAL A 137 5 ? 5 HELX_P HELX_P7 7 PRO A 86 ? ILE A 100 ? PRO A 167 ILE A 181 1 ? 15 HELX_P HELX_P8 8 LEU A 111 ? GLN A 117 ? LEU A 192 GLN A 198 1 ? 7 HELX_P HELX_P9 9 GLY A 140 ? SER A 156 ? GLY A 221 SER A 237 1 ? 17 HELX_P HELX_P10 10 TYR A 167 ? ILE A 175 ? TYR A 248 ILE A 256 5 ? 9 HELX_P HELX_P11 11 ARG A 201 ? SER A 213 ? ARG A 282 SER A 294 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale one ? B DT 3 "O3'" ? ? ? 1_555 B AAB 4 P ? ? B DT 4 B AAB 5 1_555 ? ? ? ? ? ? ? 1.585 ? ? covale2 covale one ? B AAB 4 "O3'" ? ? ? 1_555 B DA 5 P ? ? B AAB 5 B DA 6 1_555 ? ? ? ? ? ? ? 1.589 ? ? covale3 covale both ? C DT 6 "O3'" ? ? ? 1_555 C 4MF 7 P ? ? C DT 26 C 4MF 27 1_555 ? ? ? ? ? ? ? 1.594 ? ? covale4 covale both ? C 4MF 7 "O3'" ? ? ? 1_555 C DA 8 P ? ? C 4MF 27 C DA 28 1_555 ? ? ? ? ? ? ? 1.590 ? ? hydrog1 hydrog ? ? B DT 1 N3 ? ? ? 1_555 C DA 10 N1 ? ? B DT 2 C DA 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DT 1 O4 ? ? ? 1_555 C DA 10 N6 ? ? B DT 2 C DA 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DG 2 N1 ? ? ? 1_555 C DC 9 N3 ? ? B DG 3 C DC 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DG 2 N2 ? ? ? 1_555 C DC 9 O2 ? ? B DG 3 C DC 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DG 2 O6 ? ? ? 1_555 C DC 9 N4 ? ? B DG 3 C DC 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DT 3 N3 ? ? ? 1_555 C DA 8 N1 ? ? B DT 4 C DA 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DT 3 O4 ? ? ? 1_555 C DA 8 N6 ? ? B DT 4 C DA 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DA 5 N1 ? ? ? 1_555 C DT 6 N3 ? ? B DA 6 C DT 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DA 5 N6 ? ? ? 1_555 C DT 6 O4 ? ? B DA 6 C DT 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DT 6 N3 ? ? ? 1_555 C DA 5 N1 ? ? B DT 7 C DA 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DT 6 O4 ? ? ? 1_555 C DA 5 N6 ? ? B DT 7 C DA 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DC 7 N3 ? ? ? 1_555 C DG 4 N1 ? ? B DC 8 C DG 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DC 7 N4 ? ? ? 1_555 C DG 4 O6 ? ? B DC 8 C DG 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DC 7 O2 ? ? ? 1_555 C DG 4 N2 ? ? B DC 8 C DG 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B DT 8 N3 ? ? ? 1_555 C DA 3 N1 ? ? B DT 9 C DA 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B DT 8 O4 ? ? ? 1_555 C DA 3 N6 ? ? B DT 9 C DA 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B DT 9 N3 ? ? ? 1_555 C DA 2 N1 ? ? B DT 10 C DA 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B DT 9 O4 ? ? ? 1_555 C DA 2 N6 ? ? B DT 10 C DA 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 TYR 38 A . ? TYR 119 A PRO 39 A ? PRO 120 A 1 -8.40 2 ARG 81 A . ? ARG 162 A PRO 82 A ? PRO 163 A 1 2.55 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? parallel B 2 3 ? parallel B 3 4 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 37 ? TYR A 38 ? VAL A 118 TYR A 119 A 2 VAL A 128 ? ARG A 129 ? VAL A 209 ARG A 210 B 1 VAL A 119 ? ASN A 123 ? VAL A 200 ASN A 204 B 2 VAL A 58 ? GLY A 62 ? VAL A 139 GLY A 143 B 3 VAL A 160 ? TRP A 164 ? VAL A 241 TRP A 245 B 4 HIS A 181 ? THR A 185 ? HIS A 262 THR A 266 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N TYR A 38 ? N TYR A 119 O VAL A 128 ? O VAL A 209 B 1 2 O LEU A 120 ? O LEU A 201 N VAL A 58 ? N VAL A 139 B 2 3 N VAL A 59 ? N VAL A 140 O LEU A 162 ? O LEU A 243 B 3 4 N PHE A 161 ? N PHE A 242 O LEU A 183 ? O LEU A 264 # _atom_sites.entry_id 2OYT _atom_sites.fract_transf_matrix[1][1] 0.020619 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015079 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009968 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 82 82 MET MET A . n A 1 2 GLU 2 83 83 GLU GLU A . n A 1 3 PHE 3 84 84 PHE PHE A . n A 1 4 PHE 4 85 85 PHE PHE A . n A 1 5 GLY 5 86 86 GLY GLY A . n A 1 6 GLU 6 87 87 GLU GLU A . n A 1 7 SER 7 88 88 SER SER A . n A 1 8 TRP 8 89 89 TRP TRP A . n A 1 9 LYS 9 90 90 LYS LYS A . n A 1 10 LYS 10 91 91 LYS LYS A . n A 1 11 HIS 11 92 92 HIS HIS A . n A 1 12 LEU 12 93 93 LEU LEU A . n A 1 13 SER 13 94 94 SER SER A . n A 1 14 GLY 14 95 95 GLY GLY A . n A 1 15 GLU 15 96 96 GLU GLU A . n A 1 16 PHE 16 97 97 PHE PHE A . n A 1 17 GLY 17 98 98 GLY GLY A . n A 1 18 LYS 18 99 99 LYS LYS A . n A 1 19 PRO 19 100 100 PRO PRO A . n A 1 20 TYR 20 101 101 TYR TYR A . n A 1 21 PHE 21 102 102 PHE PHE A . n A 1 22 ILE 22 103 103 ILE ILE A . n A 1 23 LYS 23 104 104 LYS LYS A . n A 1 24 LEU 24 105 105 LEU LEU A . n A 1 25 MET 25 106 106 MET MET A . n A 1 26 GLY 26 107 107 GLY GLY A . n A 1 27 PHE 27 108 108 PHE PHE A . n A 1 28 VAL 28 109 109 VAL VAL A . n A 1 29 ALA 29 110 110 ALA ALA A . n A 1 30 GLU 30 111 111 GLU GLU A . n A 1 31 GLU 31 112 112 GLU GLU A . n A 1 32 ARG 32 113 113 ARG ARG A . n A 1 33 LYS 33 114 114 LYS LYS A . n A 1 34 HIS 34 115 115 HIS HIS A . n A 1 35 TYR 35 116 116 TYR TYR A . n A 1 36 THR 36 117 117 THR THR A . n A 1 37 VAL 37 118 118 VAL VAL A . n A 1 38 TYR 38 119 119 TYR TYR A . n A 1 39 PRO 39 120 120 PRO PRO A . n A 1 40 PRO 40 121 121 PRO PRO A . n A 1 41 PRO 41 122 122 PRO PRO A . n A 1 42 HIS 42 123 123 HIS HIS A . n A 1 43 GLN 43 124 124 GLN GLN A . n A 1 44 VAL 44 125 125 VAL VAL A . n A 1 45 PHE 45 126 126 PHE PHE A . n A 1 46 THR 46 127 127 THR THR A . n A 1 47 TRP 47 128 128 TRP TRP A . n A 1 48 THR 48 129 129 THR THR A . n A 1 49 GLN 49 130 130 GLN GLN A . n A 1 50 MET 50 131 131 MET MET A . n A 1 51 CYS 51 132 132 CYS CYS A . n A 1 52 ASP 52 133 133 ASP ASP A . n A 1 53 ILE 53 134 134 ILE ILE A . n A 1 54 LYS 54 135 135 LYS LYS A . n A 1 55 ASP 55 136 136 ASP ASP A . n A 1 56 VAL 56 137 137 VAL VAL A . n A 1 57 LYS 57 138 138 LYS LYS A . n A 1 58 VAL 58 139 139 VAL VAL A . n A 1 59 VAL 59 140 140 VAL VAL A . n A 1 60 ILE 60 141 141 ILE ILE A . n A 1 61 LEU 61 142 142 LEU LEU A . n A 1 62 GLY 62 143 143 GLY GLY A . n A 1 63 GLN 63 144 144 GLN GLN A . n A 1 64 ASP 64 145 145 ASP ASP A . n A 1 65 PRO 65 146 146 PRO PRO A . n A 1 66 TYR 66 147 147 TYR TYR A . n A 1 67 HIS 67 148 148 HIS HIS A . n A 1 68 GLY 68 149 149 GLY GLY A . n A 1 69 PRO 69 150 150 PRO PRO A . n A 1 70 ASN 70 151 151 ASN ASN A . n A 1 71 GLN 71 152 152 GLN GLN A . n A 1 72 ALA 72 153 153 ALA ALA A . n A 1 73 HIS 73 154 154 HIS HIS A . n A 1 74 GLY 74 155 155 GLY GLY A . n A 1 75 LEU 75 156 156 LEU LEU A . n A 1 76 CYS 76 157 157 CYS CYS A . n A 1 77 PHE 77 158 158 PHE PHE A . n A 1 78 SER 78 159 159 SER SER A . n A 1 79 VAL 79 160 160 VAL VAL A . n A 1 80 GLN 80 161 161 GLN GLN A . n A 1 81 ARG 81 162 162 ARG ARG A . n A 1 82 PRO 82 163 163 PRO PRO A . n A 1 83 VAL 83 164 164 VAL VAL A . n A 1 84 PRO 84 165 165 PRO PRO A . n A 1 85 PRO 85 166 166 PRO PRO A . n A 1 86 PRO 86 167 167 PRO PRO A . n A 1 87 PRO 87 168 168 PRO PRO A . n A 1 88 SER 88 169 169 SER SER A . n A 1 89 LEU 89 170 170 LEU LEU A . n A 1 90 GLU 90 171 171 GLU GLU A . n A 1 91 ASN 91 172 172 ASN ASN A . n A 1 92 ILE 92 173 173 ILE ILE A . n A 1 93 TYR 93 174 174 TYR TYR A . n A 1 94 LYS 94 175 175 LYS LYS A . n A 1 95 GLU 95 176 176 GLU GLU A . n A 1 96 LEU 96 177 177 LEU LEU A . n A 1 97 SER 97 178 178 SER SER A . n A 1 98 THR 98 179 179 THR THR A . n A 1 99 ASP 99 180 180 ASP ASP A . n A 1 100 ILE 100 181 181 ILE ILE A . n A 1 101 GLU 101 182 182 GLU GLU A . n A 1 102 ASP 102 183 183 ASP ASP A . n A 1 103 PHE 103 184 184 PHE PHE A . n A 1 104 VAL 104 185 185 VAL VAL A . n A 1 105 HIS 105 186 186 HIS HIS A . n A 1 106 PRO 106 187 187 PRO PRO A . n A 1 107 GLY 107 188 188 GLY GLY A . n A 1 108 HIS 108 189 189 HIS HIS A . n A 1 109 GLY 109 190 190 GLY GLY A . n A 1 110 ASP 110 191 191 ASP ASP A . n A 1 111 LEU 111 192 192 LEU LEU A . n A 1 112 SER 112 193 193 SER SER A . n A 1 113 GLY 113 194 194 GLY GLY A . n A 1 114 TRP 114 195 195 TRP TRP A . n A 1 115 ALA 115 196 196 ALA ALA A . n A 1 116 LYS 116 197 197 LYS LYS A . n A 1 117 GLN 117 198 198 GLN GLN A . n A 1 118 GLY 118 199 199 GLY GLY A . n A 1 119 VAL 119 200 200 VAL VAL A . n A 1 120 LEU 120 201 201 LEU LEU A . n A 1 121 LEU 121 202 202 LEU LEU A . n A 1 122 LEU 122 203 203 LEU LEU A . n A 1 123 ASN 123 204 204 ASN ASN A . n A 1 124 ALA 124 205 205 ALA ALA A . n A 1 125 VAL 125 206 206 VAL VAL A . n A 1 126 LEU 126 207 207 LEU LEU A . n A 1 127 THR 127 208 208 THR THR A . n A 1 128 VAL 128 209 209 VAL VAL A . n A 1 129 ARG 129 210 210 ARG ARG A . n A 1 130 ALA 130 211 211 ALA ALA A . n A 1 131 HIS 131 212 212 HIS HIS A . n A 1 132 GLN 132 213 213 GLN GLN A . n A 1 133 ALA 133 214 214 ALA ALA A . n A 1 134 ASN 134 215 215 ASN ASN A . n A 1 135 SER 135 216 216 SER SER A . n A 1 136 HIS 136 217 217 HIS HIS A . n A 1 137 LYS 137 218 218 LYS LYS A . n A 1 138 GLU 138 219 219 GLU GLU A . n A 1 139 ARG 139 220 220 ARG ARG A . n A 1 140 GLY 140 221 221 GLY GLY A . n A 1 141 TRP 141 222 222 TRP TRP A . n A 1 142 GLU 142 223 223 GLU GLU A . n A 1 143 GLN 143 224 224 GLN GLN A . n A 1 144 PHE 144 225 225 PHE PHE A . n A 1 145 THR 145 226 226 THR THR A . n A 1 146 ASP 146 227 227 ASP ASP A . n A 1 147 ALA 147 228 228 ALA ALA A . n A 1 148 VAL 148 229 229 VAL VAL A . n A 1 149 VAL 149 230 230 VAL VAL A . n A 1 150 SER 150 231 231 SER SER A . n A 1 151 TRP 151 232 232 TRP TRP A . n A 1 152 LEU 152 233 233 LEU LEU A . n A 1 153 ASN 153 234 234 ASN ASN A . n A 1 154 GLN 154 235 235 GLN GLN A . n A 1 155 ASN 155 236 236 ASN ASN A . n A 1 156 SER 156 237 237 SER SER A . n A 1 157 ASN 157 238 238 ASN ASN A . n A 1 158 GLY 158 239 239 GLY GLY A . n A 1 159 LEU 159 240 240 LEU LEU A . n A 1 160 VAL 160 241 241 VAL VAL A . n A 1 161 PHE 161 242 242 PHE PHE A . n A 1 162 LEU 162 243 243 LEU LEU A . n A 1 163 LEU 163 244 244 LEU LEU A . n A 1 164 TRP 164 245 245 TRP TRP A . n A 1 165 GLY 165 246 246 GLY GLY A . n A 1 166 SER 166 247 247 SER SER A . n A 1 167 TYR 167 248 248 TYR TYR A . n A 1 168 ALA 168 249 249 ALA ALA A . n A 1 169 GLN 169 250 250 GLN GLN A . n A 1 170 LYS 170 251 251 LYS LYS A . n A 1 171 LYS 171 252 252 LYS LYS A . n A 1 172 GLY 172 253 253 GLY GLY A . n A 1 173 SER 173 254 254 SER SER A . n A 1 174 ALA 174 255 255 ALA ALA A . n A 1 175 ILE 175 256 256 ILE ILE A . n A 1 176 ASP 176 257 257 ASP ASP A . n A 1 177 ARG 177 258 258 ARG ARG A . n A 1 178 LYS 178 259 259 LYS LYS A . n A 1 179 ARG 179 260 260 ARG ARG A . n A 1 180 HIS 180 261 261 HIS HIS A . n A 1 181 HIS 181 262 262 HIS HIS A . n A 1 182 VAL 182 263 263 VAL VAL A . n A 1 183 LEU 183 264 264 LEU LEU A . n A 1 184 GLN 184 265 265 GLN GLN A . n A 1 185 THR 185 266 266 THR THR A . n A 1 186 ALA 186 267 267 ALA ALA A . n A 1 187 HIS 187 268 268 HIS HIS A . n A 1 188 PRO 188 269 269 PRO PRO A . n A 1 189 SER 189 270 270 SER SER A . n A 1 190 PRO 190 271 271 PRO PRO A . n A 1 191 LEU 191 272 272 LEU LEU A . n A 1 192 SER 192 273 273 SER SER A . n A 1 193 VAL 193 274 274 VAL VAL A . n A 1 194 TYR 194 275 275 TYR TYR A . n A 1 195 ARG 195 276 276 ARG ARG A . n A 1 196 GLY 196 277 277 GLY GLY A . n A 1 197 PHE 197 278 278 PHE PHE A . n A 1 198 PHE 198 279 279 PHE PHE A . n A 1 199 GLY 199 280 280 GLY GLY A . n A 1 200 CYS 200 281 281 CYS CYS A . n A 1 201 ARG 201 282 282 ARG ARG A . n A 1 202 HIS 202 283 283 HIS HIS A . n A 1 203 PHE 203 284 284 PHE PHE A . n A 1 204 SER 204 285 285 SER SER A . n A 1 205 LYS 205 286 286 LYS LYS A . n A 1 206 THR 206 287 287 THR THR A . n A 1 207 ASN 207 288 288 ASN ASN A . n A 1 208 GLU 208 289 289 GLU GLU A . n A 1 209 LEU 209 290 290 LEU LEU A . n A 1 210 LEU 210 291 291 LEU LEU A . n A 1 211 GLN 211 292 292 GLN GLN A . n A 1 212 LYS 212 293 293 LYS LYS A . n A 1 213 SER 213 294 294 SER SER A . n A 1 214 GLY 214 295 295 GLY GLY A . n A 1 215 LYS 215 296 296 LYS LYS A . n A 1 216 LYS 216 297 297 LYS LYS A . n A 1 217 PRO 217 298 298 PRO PRO A . n A 1 218 ILE 218 299 299 ILE ILE A . n A 1 219 ASP 219 300 300 ASP ASP A . n A 1 220 TRP 220 301 301 TRP TRP A . n A 1 221 LYS 221 302 302 LYS LYS A . n A 1 222 GLU 222 303 303 GLU GLU A . n A 1 223 LEU 223 304 304 LEU LEU A . n B 2 1 DT 1 2 2 DT T B . n B 2 2 DG 2 3 3 DG G B . n B 2 3 DT 3 4 4 DT T B . n B 2 4 AAB 4 5 5 AAB AAB B . n B 2 5 DA 5 6 6 DA A B . n B 2 6 DT 6 7 7 DT T B . n B 2 7 DC 7 8 8 DC C B . n B 2 8 DT 8 9 9 DT T B . n B 2 9 DT 9 10 10 DT T B . n C 3 1 DA 1 21 21 DA A C . n C 3 2 DA 2 22 22 DA A C . n C 3 3 DA 3 23 23 DA A C . n C 3 4 DG 4 24 24 DG G C . n C 3 5 DA 5 25 25 DA A C . n C 3 6 DT 6 26 26 DT T C . n C 3 7 4MF 7 27 27 4MF 4MF C . n C 3 8 DA 8 28 28 DA A C . n C 3 9 DC 9 29 29 DC C C . n C 3 10 DA 10 30 30 DA A C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 HOH 1 305 1 HOH HOH A . D 4 HOH 2 306 4 HOH HOH A . D 4 HOH 3 307 5 HOH HOH A . D 4 HOH 4 308 6 HOH HOH A . D 4 HOH 5 309 7 HOH HOH A . D 4 HOH 6 310 8 HOH HOH A . D 4 HOH 7 311 9 HOH HOH A . D 4 HOH 8 312 10 HOH HOH A . D 4 HOH 9 313 12 HOH HOH A . D 4 HOH 10 314 13 HOH HOH A . D 4 HOH 11 315 14 HOH HOH A . D 4 HOH 12 316 15 HOH HOH A . D 4 HOH 13 317 16 HOH HOH A . D 4 HOH 14 318 17 HOH HOH A . D 4 HOH 15 319 18 HOH HOH A . D 4 HOH 16 320 19 HOH HOH A . D 4 HOH 17 321 20 HOH HOH A . D 4 HOH 18 322 21 HOH HOH A . D 4 HOH 19 323 22 HOH HOH A . D 4 HOH 20 324 23 HOH HOH A . D 4 HOH 21 325 24 HOH HOH A . D 4 HOH 22 326 25 HOH HOH A . D 4 HOH 23 327 26 HOH HOH A . D 4 HOH 24 328 27 HOH HOH A . D 4 HOH 25 329 28 HOH HOH A . D 4 HOH 26 330 29 HOH HOH A . D 4 HOH 27 331 31 HOH HOH A . D 4 HOH 28 332 32 HOH HOH A . D 4 HOH 29 333 33 HOH HOH A . D 4 HOH 30 334 34 HOH HOH A . D 4 HOH 31 335 35 HOH HOH A . D 4 HOH 32 336 36 HOH HOH A . D 4 HOH 33 337 37 HOH HOH A . D 4 HOH 34 338 39 HOH HOH A . D 4 HOH 35 339 40 HOH HOH A . D 4 HOH 36 340 41 HOH HOH A . D 4 HOH 37 341 42 HOH HOH A . D 4 HOH 38 342 43 HOH HOH A . D 4 HOH 39 343 44 HOH HOH A . D 4 HOH 40 344 45 HOH HOH A . D 4 HOH 41 345 46 HOH HOH A . D 4 HOH 42 346 47 HOH HOH A . D 4 HOH 43 347 48 HOH HOH A . D 4 HOH 44 348 49 HOH HOH A . D 4 HOH 45 349 50 HOH HOH A . D 4 HOH 46 350 51 HOH HOH A . D 4 HOH 47 351 52 HOH HOH A . D 4 HOH 48 352 53 HOH HOH A . D 4 HOH 49 353 54 HOH HOH A . D 4 HOH 50 354 55 HOH HOH A . D 4 HOH 51 355 58 HOH HOH A . D 4 HOH 52 356 59 HOH HOH A . D 4 HOH 53 357 61 HOH HOH A . D 4 HOH 54 358 62 HOH HOH A . D 4 HOH 55 359 63 HOH HOH A . D 4 HOH 56 360 64 HOH HOH A . D 4 HOH 57 361 65 HOH HOH A . D 4 HOH 58 362 66 HOH HOH A . D 4 HOH 59 363 67 HOH HOH A . D 4 HOH 60 364 68 HOH HOH A . D 4 HOH 61 365 70 HOH HOH A . D 4 HOH 62 366 71 HOH HOH A . D 4 HOH 63 367 72 HOH HOH A . D 4 HOH 64 368 73 HOH HOH A . D 4 HOH 65 369 74 HOH HOH A . D 4 HOH 66 370 75 HOH HOH A . D 4 HOH 67 371 76 HOH HOH A . D 4 HOH 68 372 78 HOH HOH A . D 4 HOH 69 373 79 HOH HOH A . D 4 HOH 70 374 80 HOH HOH A . D 4 HOH 71 375 81 HOH HOH A . D 4 HOH 72 376 82 HOH HOH A . D 4 HOH 73 377 83 HOH HOH A . D 4 HOH 74 378 84 HOH HOH A . D 4 HOH 75 379 86 HOH HOH A . D 4 HOH 76 380 87 HOH HOH A . D 4 HOH 77 381 88 HOH HOH A . D 4 HOH 78 382 89 HOH HOH A . D 4 HOH 79 383 90 HOH HOH A . D 4 HOH 80 384 92 HOH HOH A . D 4 HOH 81 385 93 HOH HOH A . D 4 HOH 82 386 94 HOH HOH A . D 4 HOH 83 387 95 HOH HOH A . D 4 HOH 84 388 96 HOH HOH A . D 4 HOH 85 389 97 HOH HOH A . D 4 HOH 86 390 98 HOH HOH A . D 4 HOH 87 391 100 HOH HOH A . D 4 HOH 88 392 103 HOH HOH A . D 4 HOH 89 393 104 HOH HOH A . D 4 HOH 90 394 105 HOH HOH A . D 4 HOH 91 395 106 HOH HOH A . D 4 HOH 92 396 107 HOH HOH A . D 4 HOH 93 397 108 HOH HOH A . D 4 HOH 94 398 109 HOH HOH A . D 4 HOH 95 399 110 HOH HOH A . D 4 HOH 96 400 111 HOH HOH A . D 4 HOH 97 401 113 HOH HOH A . D 4 HOH 98 402 114 HOH HOH A . D 4 HOH 99 403 115 HOH HOH A . D 4 HOH 100 404 116 HOH HOH A . D 4 HOH 101 405 117 HOH HOH A . D 4 HOH 102 406 118 HOH HOH A . D 4 HOH 103 407 119 HOH HOH A . D 4 HOH 104 408 121 HOH HOH A . D 4 HOH 105 409 122 HOH HOH A . D 4 HOH 106 410 123 HOH HOH A . D 4 HOH 107 411 124 HOH HOH A . D 4 HOH 108 412 125 HOH HOH A . D 4 HOH 109 413 126 HOH HOH A . D 4 HOH 110 414 127 HOH HOH A . D 4 HOH 111 415 128 HOH HOH A . D 4 HOH 112 416 129 HOH HOH A . D 4 HOH 113 417 130 HOH HOH A . D 4 HOH 114 418 131 HOH HOH A . D 4 HOH 115 419 132 HOH HOH A . D 4 HOH 116 420 133 HOH HOH A . D 4 HOH 117 421 134 HOH HOH A . D 4 HOH 118 422 135 HOH HOH A . D 4 HOH 119 423 136 HOH HOH A . D 4 HOH 120 424 137 HOH HOH A . D 4 HOH 121 425 138 HOH HOH A . D 4 HOH 122 426 139 HOH HOH A . D 4 HOH 123 427 140 HOH HOH A . D 4 HOH 124 428 141 HOH HOH A . D 4 HOH 125 429 143 HOH HOH A . D 4 HOH 126 430 144 HOH HOH A . D 4 HOH 127 431 145 HOH HOH A . D 4 HOH 128 432 146 HOH HOH A . D 4 HOH 129 433 148 HOH HOH A . D 4 HOH 130 434 149 HOH HOH A . D 4 HOH 131 435 150 HOH HOH A . D 4 HOH 132 436 151 HOH HOH A . D 4 HOH 133 437 152 HOH HOH A . D 4 HOH 134 438 153 HOH HOH A . D 4 HOH 135 439 154 HOH HOH A . D 4 HOH 136 440 155 HOH HOH A . D 4 HOH 137 441 156 HOH HOH A . D 4 HOH 138 442 157 HOH HOH A . D 4 HOH 139 443 158 HOH HOH A . D 4 HOH 140 444 159 HOH HOH A . D 4 HOH 141 445 161 HOH HOH A . D 4 HOH 142 446 162 HOH HOH A . D 4 HOH 143 447 163 HOH HOH A . D 4 HOH 144 448 164 HOH HOH A . D 4 HOH 145 449 166 HOH HOH A . D 4 HOH 146 450 167 HOH HOH A . D 4 HOH 147 451 168 HOH HOH A . D 4 HOH 148 452 169 HOH HOH A . D 4 HOH 149 453 170 HOH HOH A . D 4 HOH 150 454 171 HOH HOH A . D 4 HOH 151 455 172 HOH HOH A . D 4 HOH 152 456 173 HOH HOH A . D 4 HOH 153 457 174 HOH HOH A . D 4 HOH 154 458 175 HOH HOH A . D 4 HOH 155 459 176 HOH HOH A . D 4 HOH 156 460 177 HOH HOH A . D 4 HOH 157 461 178 HOH HOH A . D 4 HOH 158 462 179 HOH HOH A . D 4 HOH 159 463 180 HOH HOH A . D 4 HOH 160 464 181 HOH HOH A . D 4 HOH 161 465 182 HOH HOH A . D 4 HOH 162 466 183 HOH HOH A . D 4 HOH 163 467 184 HOH HOH A . D 4 HOH 164 468 185 HOH HOH A . D 4 HOH 165 469 186 HOH HOH A . D 4 HOH 166 470 187 HOH HOH A . D 4 HOH 167 471 190 HOH HOH A . D 4 HOH 168 472 191 HOH HOH A . D 4 HOH 169 473 192 HOH HOH A . D 4 HOH 170 474 193 HOH HOH A . D 4 HOH 171 475 194 HOH HOH A . D 4 HOH 172 476 195 HOH HOH A . D 4 HOH 173 477 196 HOH HOH A . D 4 HOH 174 478 197 HOH HOH A . D 4 HOH 175 479 198 HOH HOH A . D 4 HOH 176 480 199 HOH HOH A . D 4 HOH 177 481 200 HOH HOH A . D 4 HOH 178 482 201 HOH HOH A . D 4 HOH 179 483 202 HOH HOH A . D 4 HOH 180 484 203 HOH HOH A . D 4 HOH 181 485 204 HOH HOH A . D 4 HOH 182 486 205 HOH HOH A . D 4 HOH 183 487 206 HOH HOH A . D 4 HOH 184 488 207 HOH HOH A . D 4 HOH 185 489 208 HOH HOH A . D 4 HOH 186 490 209 HOH HOH A . D 4 HOH 187 491 210 HOH HOH A . D 4 HOH 188 492 212 HOH HOH A . D 4 HOH 189 493 214 HOH HOH A . D 4 HOH 190 494 215 HOH HOH A . D 4 HOH 191 495 216 HOH HOH A . D 4 HOH 192 496 217 HOH HOH A . D 4 HOH 193 497 218 HOH HOH A . D 4 HOH 194 498 219 HOH HOH A . D 4 HOH 195 499 220 HOH HOH A . D 4 HOH 196 500 221 HOH HOH A . D 4 HOH 197 501 222 HOH HOH A . D 4 HOH 198 502 224 HOH HOH A . D 4 HOH 199 503 225 HOH HOH A . D 4 HOH 200 504 226 HOH HOH A . D 4 HOH 201 505 228 HOH HOH A . D 4 HOH 202 506 229 HOH HOH A . D 4 HOH 203 507 231 HOH HOH A . D 4 HOH 204 508 232 HOH HOH A . D 4 HOH 205 509 233 HOH HOH A . D 4 HOH 206 510 234 HOH HOH A . D 4 HOH 207 511 235 HOH HOH A . D 4 HOH 208 512 237 HOH HOH A . D 4 HOH 209 513 238 HOH HOH A . D 4 HOH 210 514 239 HOH HOH A . D 4 HOH 211 515 240 HOH HOH A . D 4 HOH 212 516 241 HOH HOH A . D 4 HOH 213 517 242 HOH HOH A . D 4 HOH 214 518 243 HOH HOH A . D 4 HOH 215 519 244 HOH HOH A . D 4 HOH 216 520 245 HOH HOH A . D 4 HOH 217 521 246 HOH HOH A . D 4 HOH 218 522 247 HOH HOH A . D 4 HOH 219 523 248 HOH HOH A . D 4 HOH 220 524 250 HOH HOH A . D 4 HOH 221 525 251 HOH HOH A . D 4 HOH 222 526 252 HOH HOH A . D 4 HOH 223 527 253 HOH HOH A . D 4 HOH 224 528 255 HOH HOH A . D 4 HOH 225 529 256 HOH HOH A . D 4 HOH 226 530 257 HOH HOH A . D 4 HOH 227 531 258 HOH HOH A . D 4 HOH 228 532 259 HOH HOH A . D 4 HOH 229 533 261 HOH HOH A . D 4 HOH 230 534 262 HOH HOH A . D 4 HOH 231 535 263 HOH HOH A . D 4 HOH 232 536 264 HOH HOH A . D 4 HOH 233 537 265 HOH HOH A . D 4 HOH 234 538 266 HOH HOH A . D 4 HOH 235 539 267 HOH HOH A . D 4 HOH 236 540 268 HOH HOH A . D 4 HOH 237 541 269 HOH HOH A . D 4 HOH 238 542 271 HOH HOH A . D 4 HOH 239 543 272 HOH HOH A . D 4 HOH 240 544 273 HOH HOH A . D 4 HOH 241 545 274 HOH HOH A . D 4 HOH 242 546 275 HOH HOH A . D 4 HOH 243 547 276 HOH HOH A . D 4 HOH 244 548 278 HOH HOH A . D 4 HOH 245 549 279 HOH HOH A . D 4 HOH 246 550 283 HOH HOH A . D 4 HOH 247 551 285 HOH HOH A . D 4 HOH 248 552 288 HOH HOH A . D 4 HOH 249 553 289 HOH HOH A . D 4 HOH 250 554 290 HOH HOH A . D 4 HOH 251 555 293 HOH HOH A . D 4 HOH 252 556 294 HOH HOH A . D 4 HOH 253 557 295 HOH HOH A . D 4 HOH 254 558 298 HOH HOH A . D 4 HOH 255 559 300 HOH HOH A . D 4 HOH 256 560 301 HOH HOH A . D 4 HOH 257 561 302 HOH HOH A . D 4 HOH 258 562 303 HOH HOH A . D 4 HOH 259 563 304 HOH HOH A . D 4 HOH 260 564 305 HOH HOH A . D 4 HOH 261 565 306 HOH HOH A . D 4 HOH 262 566 307 HOH HOH A . D 4 HOH 263 567 308 HOH HOH A . D 4 HOH 264 568 309 HOH HOH A . D 4 HOH 265 569 311 HOH HOH A . D 4 HOH 266 570 313 HOH HOH A . D 4 HOH 267 571 314 HOH HOH A . D 4 HOH 268 572 315 HOH HOH A . D 4 HOH 269 573 316 HOH HOH A . D 4 HOH 270 574 317 HOH HOH A . D 4 HOH 271 575 318 HOH HOH A . D 4 HOH 272 576 319 HOH HOH A . D 4 HOH 273 577 320 HOH HOH A . D 4 HOH 274 578 321 HOH HOH A . D 4 HOH 275 579 322 HOH HOH A . D 4 HOH 276 580 325 HOH HOH A . D 4 HOH 277 581 326 HOH HOH A . D 4 HOH 278 582 327 HOH HOH A . D 4 HOH 279 583 328 HOH HOH A . D 4 HOH 280 584 329 HOH HOH A . D 4 HOH 281 585 331 HOH HOH A . D 4 HOH 282 586 332 HOH HOH A . D 4 HOH 283 587 333 HOH HOH A . D 4 HOH 284 588 334 HOH HOH A . D 4 HOH 285 589 335 HOH HOH A . D 4 HOH 286 590 336 HOH HOH A . D 4 HOH 287 591 337 HOH HOH A . D 4 HOH 288 592 338 HOH HOH A . D 4 HOH 289 593 339 HOH HOH A . D 4 HOH 290 594 340 HOH HOH A . D 4 HOH 291 595 341 HOH HOH A . D 4 HOH 292 596 342 HOH HOH A . D 4 HOH 293 597 343 HOH HOH A . D 4 HOH 294 598 344 HOH HOH A . D 4 HOH 295 599 345 HOH HOH A . D 4 HOH 296 600 347 HOH HOH A . D 4 HOH 297 601 349 HOH HOH A . D 4 HOH 298 602 350 HOH HOH A . D 4 HOH 299 603 354 HOH HOH A . D 4 HOH 300 604 355 HOH HOH A . D 4 HOH 301 605 356 HOH HOH A . D 4 HOH 302 606 357 HOH HOH A . D 4 HOH 303 607 359 HOH HOH A . D 4 HOH 304 608 362 HOH HOH A . D 4 HOH 305 609 363 HOH HOH A . D 4 HOH 306 610 364 HOH HOH A . D 4 HOH 307 611 365 HOH HOH A . D 4 HOH 308 612 367 HOH HOH A . D 4 HOH 309 613 368 HOH HOH A . D 4 HOH 310 614 369 HOH HOH A . D 4 HOH 311 615 370 HOH HOH A . D 4 HOH 312 616 371 HOH HOH A . D 4 HOH 313 617 372 HOH HOH A . D 4 HOH 314 618 373 HOH HOH A . D 4 HOH 315 619 374 HOH HOH A . D 4 HOH 316 620 376 HOH HOH A . D 4 HOH 317 621 377 HOH HOH A . D 4 HOH 318 622 378 HOH HOH A . D 4 HOH 319 623 379 HOH HOH A . D 4 HOH 320 624 381 HOH HOH A . D 4 HOH 321 625 382 HOH HOH A . D 4 HOH 322 626 384 HOH HOH A . D 4 HOH 323 627 386 HOH HOH A . D 4 HOH 324 628 388 HOH HOH A . D 4 HOH 325 629 391 HOH HOH A . D 4 HOH 326 630 393 HOH HOH A . D 4 HOH 327 631 394 HOH HOH A . D 4 HOH 328 632 395 HOH HOH A . D 4 HOH 329 633 397 HOH HOH A . D 4 HOH 330 634 398 HOH HOH A . D 4 HOH 331 635 399 HOH HOH A . E 4 HOH 1 11 2 HOH HOH B . E 4 HOH 2 12 3 HOH HOH B . E 4 HOH 3 13 11 HOH HOH B . E 4 HOH 4 14 30 HOH HOH B . E 4 HOH 5 15 38 HOH HOH B . E 4 HOH 6 16 56 HOH HOH B . E 4 HOH 7 17 60 HOH HOH B . E 4 HOH 8 18 77 HOH HOH B . E 4 HOH 9 19 99 HOH HOH B . E 4 HOH 10 20 101 HOH HOH B . E 4 HOH 11 21 120 HOH HOH B . E 4 HOH 12 22 142 HOH HOH B . E 4 HOH 13 23 160 HOH HOH B . E 4 HOH 14 24 188 HOH HOH B . E 4 HOH 15 25 211 HOH HOH B . E 4 HOH 16 26 213 HOH HOH B . E 4 HOH 17 27 230 HOH HOH B . E 4 HOH 18 28 236 HOH HOH B . E 4 HOH 19 29 249 HOH HOH B . E 4 HOH 20 30 254 HOH HOH B . E 4 HOH 21 31 270 HOH HOH B . E 4 HOH 22 32 277 HOH HOH B . E 4 HOH 23 33 281 HOH HOH B . E 4 HOH 24 34 282 HOH HOH B . E 4 HOH 25 35 291 HOH HOH B . E 4 HOH 26 36 292 HOH HOH B . E 4 HOH 27 37 299 HOH HOH B . E 4 HOH 28 38 310 HOH HOH B . E 4 HOH 29 39 312 HOH HOH B . E 4 HOH 30 40 323 HOH HOH B . E 4 HOH 31 41 324 HOH HOH B . E 4 HOH 32 42 346 HOH HOH B . E 4 HOH 33 43 351 HOH HOH B . E 4 HOH 34 44 352 HOH HOH B . E 4 HOH 35 45 353 HOH HOH B . E 4 HOH 36 46 360 HOH HOH B . E 4 HOH 37 47 366 HOH HOH B . E 4 HOH 38 48 375 HOH HOH B . E 4 HOH 39 49 380 HOH HOH B . E 4 HOH 40 50 383 HOH HOH B . E 4 HOH 41 51 387 HOH HOH B . E 4 HOH 42 52 389 HOH HOH B . E 4 HOH 43 53 390 HOH HOH B . F 4 HOH 1 57 57 HOH HOH C . F 4 HOH 2 69 69 HOH HOH C . F 4 HOH 3 85 85 HOH HOH C . F 4 HOH 4 91 91 HOH HOH C . F 4 HOH 5 112 112 HOH HOH C . F 4 HOH 6 147 147 HOH HOH C . F 4 HOH 7 165 165 HOH HOH C . F 4 HOH 8 189 189 HOH HOH C . F 4 HOH 9 223 223 HOH HOH C . F 4 HOH 10 227 227 HOH HOH C . F 4 HOH 11 260 260 HOH HOH C . F 4 HOH 12 280 280 HOH HOH C . F 4 HOH 13 284 284 HOH HOH C . F 4 HOH 14 286 286 HOH HOH C . F 4 HOH 15 287 287 HOH HOH C . F 4 HOH 16 296 296 HOH HOH C . F 4 HOH 17 297 297 HOH HOH C . F 4 HOH 18 330 330 HOH HOH C . F 4 HOH 19 348 348 HOH HOH C . F 4 HOH 20 358 358 HOH HOH C . F 4 HOH 21 361 361 HOH HOH C . F 4 HOH 22 385 385 HOH HOH C . F 4 HOH 23 392 392 HOH HOH C . F 4 HOH 24 396 396 HOH HOH C . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-10-30 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2014-07-09 4 'Structure model' 1 3 2018-01-24 5 'Structure model' 1 4 2023-08-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Non-polymer description' 3 4 'Structure model' 'Structure summary' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Derived calculations' 7 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' audit_author 2 5 'Structure model' chem_comp_atom 3 5 'Structure model' chem_comp_bond 4 5 'Structure model' database_2 5 5 'Structure model' pdbx_initial_refinement_model 6 5 'Structure model' struct_conn 7 5 'Structure model' struct_ref_seq 8 5 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_audit_author.name' 2 5 'Structure model' '_database_2.pdbx_DOI' 3 5 'Structure model' '_database_2.pdbx_database_accession' 4 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 5 5 'Structure model' '_struct_ref_seq.db_align_beg' 6 5 'Structure model' '_struct_ref_seq.db_align_end' 7 5 'Structure model' '_struct_ref_seq_dif.details' # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal REFMAC 5.2.0005 ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran_77 ? 1 PDB_EXTRACT 2.000 'April. 3, 2006' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 2 HKL-2000 . ? ? ? ? 'data collection' ? ? ? 3 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 4 SCALEPACK . ? ? ? ? 'data scaling' ? ? ? 5 MOLREP . ? ? ? ? phasing ? ? ? 6 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" B DT 2 ? ? "C1'" B DT 2 ? ? N1 B DT 2 ? ? 110.17 108.30 1.87 0.30 N 2 1 "C3'" B AAB 5 ? ? "O3'" B AAB 5 ? ? P B DA 6 ? ? 127.15 119.70 7.45 1.20 Y 3 1 "O4'" B DT 10 ? ? "C1'" B DT 10 ? ? N1 B DT 10 ? ? 110.54 108.30 2.24 0.30 N 4 1 "O4'" C DA 23 ? ? "C1'" C DA 23 ? ? N9 C DA 23 ? ? 111.05 108.30 2.75 0.30 N 5 1 "C3'" C 4MF 27 ? ? "O3'" C 4MF 27 ? ? P C DA 28 ? ? 130.70 119.70 11.00 1.20 Y 6 1 "O3'" C 4MF 27 ? ? P C DA 28 ? ? "O5'" C DA 28 ? ? 90.32 104.00 -13.68 1.90 Y 7 1 "O4'" C DC 29 ? ? "C1'" C DC 29 ? ? N1 C DC 29 ? ? 112.07 108.30 3.77 0.30 N 8 1 "O4'" C DA 30 ? ? "C1'" C DA 30 ? ? N9 C DA 30 ? ? 111.30 108.30 3.00 0.30 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 83 ? ? -142.59 -158.42 2 1 GLN A 152 ? ? -98.69 -69.05 3 1 PHE A 158 ? ? 72.90 -6.18 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 4MF O3P O N N 1 4MF O2P O N N 2 4MF P P N N 3 4MF O1P O N N 4 4MF "O5'" O N N 5 4MF "C5'" C N N 6 4MF "C4'" C N R 7 4MF "C3'" C N S 8 4MF "O3'" O N N 9 4MF "C2'" C N N 10 4MF "C1'" C N R 11 4MF "O4'" O N N 12 4MF N1 N Y N 13 4MF C7A C Y N 14 4MF C7 C Y N 15 4MF C6 C Y N 16 4MF C5 C Y N 17 4MF C4 C Y N 18 4MF C4M C N N 19 4MF C3A C Y N 20 4MF C3 C Y N 21 4MF C2 C Y N 22 4MF HOP3 H N N 23 4MF HOP2 H N N 24 4MF "H5'1" H N N 25 4MF "H5'2" H N N 26 4MF "H4'" H N N 27 4MF "H3'" H N N 28 4MF H3T H N N 29 4MF "H2'1" H N N 30 4MF "H2'2" H N N 31 4MF "H1'" H N N 32 4MF H7 H N N 33 4MF H6 H N N 34 4MF H5 H N N 35 4MF H4M1 H N N 36 4MF H4M2 H N N 37 4MF H4M3 H N N 38 4MF H3 H N N 39 4MF H2 H N N 40 AAB P P N N 41 AAB O1P O N N 42 AAB O2P O N N 43 AAB O3P O N N 44 AAB "O5'" O N N 45 AAB "C5'" C N N 46 AAB "C4'" C N R 47 AAB "O4'" O N N 48 AAB "C1'" C N R 49 AAB "O1'" O N N 50 AAB "C2'" C N N 51 AAB "C3'" C N S 52 AAB "O3'" O N N 53 AAB H1P H N N 54 AAB H3P H N N 55 AAB "H5'1" H N N 56 AAB "H5'2" H N N 57 AAB "H4'" H N N 58 AAB "H1'" H N N 59 AAB "HO1'" H N N 60 AAB "H2'1" H N N 61 AAB "H2'2" H N N 62 AAB "H3'" H N N 63 AAB "HO3'" H N N 64 ALA N N N N 65 ALA CA C N S 66 ALA C C N N 67 ALA O O N N 68 ALA CB C N N 69 ALA OXT O N N 70 ALA H H N N 71 ALA H2 H N N 72 ALA HA H N N 73 ALA HB1 H N N 74 ALA HB2 H N N 75 ALA HB3 H N N 76 ALA HXT H N N 77 ARG N N N N 78 ARG CA C N S 79 ARG C C N N 80 ARG O O N N 81 ARG CB C N N 82 ARG CG C N N 83 ARG CD C N N 84 ARG NE N N N 85 ARG CZ C N N 86 ARG NH1 N N N 87 ARG NH2 N N N 88 ARG OXT O N N 89 ARG H H N N 90 ARG H2 H N N 91 ARG HA H N N 92 ARG HB2 H N N 93 ARG HB3 H N N 94 ARG HG2 H N N 95 ARG HG3 H N N 96 ARG HD2 H N N 97 ARG HD3 H N N 98 ARG HE H N N 99 ARG HH11 H N N 100 ARG HH12 H N N 101 ARG HH21 H N N 102 ARG HH22 H N N 103 ARG HXT H N N 104 ASN N N N N 105 ASN CA C N S 106 ASN C C N N 107 ASN O O N N 108 ASN CB C N N 109 ASN CG C N N 110 ASN OD1 O N N 111 ASN ND2 N N N 112 ASN OXT O N N 113 ASN H H N N 114 ASN H2 H N N 115 ASN HA H N N 116 ASN HB2 H N N 117 ASN HB3 H N N 118 ASN HD21 H N N 119 ASN HD22 H N N 120 ASN HXT H N N 121 ASP N N N N 122 ASP CA C N S 123 ASP C C N N 124 ASP O O N N 125 ASP CB C N N 126 ASP CG C N N 127 ASP OD1 O N N 128 ASP OD2 O N N 129 ASP OXT O N N 130 ASP H H N N 131 ASP H2 H N N 132 ASP HA H N N 133 ASP HB2 H N N 134 ASP HB3 H N N 135 ASP HD2 H N N 136 ASP HXT H N N 137 CYS N N N N 138 CYS CA C N R 139 CYS C C N N 140 CYS O O N N 141 CYS CB C N N 142 CYS SG S N N 143 CYS OXT O N N 144 CYS H H N N 145 CYS H2 H N N 146 CYS HA H N N 147 CYS HB2 H N N 148 CYS HB3 H N N 149 CYS HG H N N 150 CYS HXT H N N 151 DA OP3 O N N 152 DA P P N N 153 DA OP1 O N N 154 DA OP2 O N N 155 DA "O5'" O N N 156 DA "C5'" C N N 157 DA "C4'" C N R 158 DA "O4'" O N N 159 DA "C3'" C N S 160 DA "O3'" O N N 161 DA "C2'" C N N 162 DA "C1'" C N R 163 DA N9 N Y N 164 DA C8 C Y N 165 DA N7 N Y N 166 DA C5 C Y N 167 DA C6 C Y N 168 DA N6 N N N 169 DA N1 N Y N 170 DA C2 C Y N 171 DA N3 N Y N 172 DA C4 C Y N 173 DA HOP3 H N N 174 DA HOP2 H N N 175 DA "H5'" H N N 176 DA "H5''" H N N 177 DA "H4'" H N N 178 DA "H3'" H N N 179 DA "HO3'" H N N 180 DA "H2'" H N N 181 DA "H2''" H N N 182 DA "H1'" H N N 183 DA H8 H N N 184 DA H61 H N N 185 DA H62 H N N 186 DA H2 H N N 187 DC OP3 O N N 188 DC P P N N 189 DC OP1 O N N 190 DC OP2 O N N 191 DC "O5'" O N N 192 DC "C5'" C N N 193 DC "C4'" C N R 194 DC "O4'" O N N 195 DC "C3'" C N S 196 DC "O3'" O N N 197 DC "C2'" C N N 198 DC "C1'" C N R 199 DC N1 N N N 200 DC C2 C N N 201 DC O2 O N N 202 DC N3 N N N 203 DC C4 C N N 204 DC N4 N N N 205 DC C5 C N N 206 DC C6 C N N 207 DC HOP3 H N N 208 DC HOP2 H N N 209 DC "H5'" H N N 210 DC "H5''" H N N 211 DC "H4'" H N N 212 DC "H3'" H N N 213 DC "HO3'" H N N 214 DC "H2'" H N N 215 DC "H2''" H N N 216 DC "H1'" H N N 217 DC H41 H N N 218 DC H42 H N N 219 DC H5 H N N 220 DC H6 H N N 221 DG OP3 O N N 222 DG P P N N 223 DG OP1 O N N 224 DG OP2 O N N 225 DG "O5'" O N N 226 DG "C5'" C N N 227 DG "C4'" C N R 228 DG "O4'" O N N 229 DG "C3'" C N S 230 DG "O3'" O N N 231 DG "C2'" C N N 232 DG "C1'" C N R 233 DG N9 N Y N 234 DG C8 C Y N 235 DG N7 N Y N 236 DG C5 C Y N 237 DG C6 C N N 238 DG O6 O N N 239 DG N1 N N N 240 DG C2 C N N 241 DG N2 N N N 242 DG N3 N N N 243 DG C4 C Y N 244 DG HOP3 H N N 245 DG HOP2 H N N 246 DG "H5'" H N N 247 DG "H5''" H N N 248 DG "H4'" H N N 249 DG "H3'" H N N 250 DG "HO3'" H N N 251 DG "H2'" H N N 252 DG "H2''" H N N 253 DG "H1'" H N N 254 DG H8 H N N 255 DG H1 H N N 256 DG H21 H N N 257 DG H22 H N N 258 DT OP3 O N N 259 DT P P N N 260 DT OP1 O N N 261 DT OP2 O N N 262 DT "O5'" O N N 263 DT "C5'" C N N 264 DT "C4'" C N R 265 DT "O4'" O N N 266 DT "C3'" C N S 267 DT "O3'" O N N 268 DT "C2'" C N N 269 DT "C1'" C N R 270 DT N1 N N N 271 DT C2 C N N 272 DT O2 O N N 273 DT N3 N N N 274 DT C4 C N N 275 DT O4 O N N 276 DT C5 C N N 277 DT C7 C N N 278 DT C6 C N N 279 DT HOP3 H N N 280 DT HOP2 H N N 281 DT "H5'" H N N 282 DT "H5''" H N N 283 DT "H4'" H N N 284 DT "H3'" H N N 285 DT "HO3'" H N N 286 DT "H2'" H N N 287 DT "H2''" H N N 288 DT "H1'" H N N 289 DT H3 H N N 290 DT H71 H N N 291 DT H72 H N N 292 DT H73 H N N 293 DT H6 H N N 294 GLN N N N N 295 GLN CA C N S 296 GLN C C N N 297 GLN O O N N 298 GLN CB C N N 299 GLN CG C N N 300 GLN CD C N N 301 GLN OE1 O N N 302 GLN NE2 N N N 303 GLN OXT O N N 304 GLN H H N N 305 GLN H2 H N N 306 GLN HA H N N 307 GLN HB2 H N N 308 GLN HB3 H N N 309 GLN HG2 H N N 310 GLN HG3 H N N 311 GLN HE21 H N N 312 GLN HE22 H N N 313 GLN HXT H N N 314 GLU N N N N 315 GLU CA C N S 316 GLU C C N N 317 GLU O O N N 318 GLU CB C N N 319 GLU CG C N N 320 GLU CD C N N 321 GLU OE1 O N N 322 GLU OE2 O N N 323 GLU OXT O N N 324 GLU H H N N 325 GLU H2 H N N 326 GLU HA H N N 327 GLU HB2 H N N 328 GLU HB3 H N N 329 GLU HG2 H N N 330 GLU HG3 H N N 331 GLU HE2 H N N 332 GLU HXT H N N 333 GLY N N N N 334 GLY CA C N N 335 GLY C C N N 336 GLY O O N N 337 GLY OXT O N N 338 GLY H H N N 339 GLY H2 H N N 340 GLY HA2 H N N 341 GLY HA3 H N N 342 GLY HXT H N N 343 HIS N N N N 344 HIS CA C N S 345 HIS C C N N 346 HIS O O N N 347 HIS CB C N N 348 HIS CG C Y N 349 HIS ND1 N Y N 350 HIS CD2 C Y N 351 HIS CE1 C Y N 352 HIS NE2 N Y N 353 HIS OXT O N N 354 HIS H H N N 355 HIS H2 H N N 356 HIS HA H N N 357 HIS HB2 H N N 358 HIS HB3 H N N 359 HIS HD1 H N N 360 HIS HD2 H N N 361 HIS HE1 H N N 362 HIS HE2 H N N 363 HIS HXT H N N 364 HOH O O N N 365 HOH H1 H N N 366 HOH H2 H N N 367 ILE N N N N 368 ILE CA C N S 369 ILE C C N N 370 ILE O O N N 371 ILE CB C N S 372 ILE CG1 C N N 373 ILE CG2 C N N 374 ILE CD1 C N N 375 ILE OXT O N N 376 ILE H H N N 377 ILE H2 H N N 378 ILE HA H N N 379 ILE HB H N N 380 ILE HG12 H N N 381 ILE HG13 H N N 382 ILE HG21 H N N 383 ILE HG22 H N N 384 ILE HG23 H N N 385 ILE HD11 H N N 386 ILE HD12 H N N 387 ILE HD13 H N N 388 ILE HXT H N N 389 LEU N N N N 390 LEU CA C N S 391 LEU C C N N 392 LEU O O N N 393 LEU CB C N N 394 LEU CG C N N 395 LEU CD1 C N N 396 LEU CD2 C N N 397 LEU OXT O N N 398 LEU H H N N 399 LEU H2 H N N 400 LEU HA H N N 401 LEU HB2 H N N 402 LEU HB3 H N N 403 LEU HG H N N 404 LEU HD11 H N N 405 LEU HD12 H N N 406 LEU HD13 H N N 407 LEU HD21 H N N 408 LEU HD22 H N N 409 LEU HD23 H N N 410 LEU HXT H N N 411 LYS N N N N 412 LYS CA C N S 413 LYS C C N N 414 LYS O O N N 415 LYS CB C N N 416 LYS CG C N N 417 LYS CD C N N 418 LYS CE C N N 419 LYS NZ N N N 420 LYS OXT O N N 421 LYS H H N N 422 LYS H2 H N N 423 LYS HA H N N 424 LYS HB2 H N N 425 LYS HB3 H N N 426 LYS HG2 H N N 427 LYS HG3 H N N 428 LYS HD2 H N N 429 LYS HD3 H N N 430 LYS HE2 H N N 431 LYS HE3 H N N 432 LYS HZ1 H N N 433 LYS HZ2 H N N 434 LYS HZ3 H N N 435 LYS HXT H N N 436 MET N N N N 437 MET CA C N S 438 MET C C N N 439 MET O O N N 440 MET CB C N N 441 MET CG C N N 442 MET SD S N N 443 MET CE C N N 444 MET OXT O N N 445 MET H H N N 446 MET H2 H N N 447 MET HA H N N 448 MET HB2 H N N 449 MET HB3 H N N 450 MET HG2 H N N 451 MET HG3 H N N 452 MET HE1 H N N 453 MET HE2 H N N 454 MET HE3 H N N 455 MET HXT H N N 456 PHE N N N N 457 PHE CA C N S 458 PHE C C N N 459 PHE O O N N 460 PHE CB C N N 461 PHE CG C Y N 462 PHE CD1 C Y N 463 PHE CD2 C Y N 464 PHE CE1 C Y N 465 PHE CE2 C Y N 466 PHE CZ C Y N 467 PHE OXT O N N 468 PHE H H N N 469 PHE H2 H N N 470 PHE HA H N N 471 PHE HB2 H N N 472 PHE HB3 H N N 473 PHE HD1 H N N 474 PHE HD2 H N N 475 PHE HE1 H N N 476 PHE HE2 H N N 477 PHE HZ H N N 478 PHE HXT H N N 479 PRO N N N N 480 PRO CA C N S 481 PRO C C N N 482 PRO O O N N 483 PRO CB C N N 484 PRO CG C N N 485 PRO CD C N N 486 PRO OXT O N N 487 PRO H H N N 488 PRO HA H N N 489 PRO HB2 H N N 490 PRO HB3 H N N 491 PRO HG2 H N N 492 PRO HG3 H N N 493 PRO HD2 H N N 494 PRO HD3 H N N 495 PRO HXT H N N 496 SER N N N N 497 SER CA C N S 498 SER C C N N 499 SER O O N N 500 SER CB C N N 501 SER OG O N N 502 SER OXT O N N 503 SER H H N N 504 SER H2 H N N 505 SER HA H N N 506 SER HB2 H N N 507 SER HB3 H N N 508 SER HG H N N 509 SER HXT H N N 510 THR N N N N 511 THR CA C N S 512 THR C C N N 513 THR O O N N 514 THR CB C N R 515 THR OG1 O N N 516 THR CG2 C N N 517 THR OXT O N N 518 THR H H N N 519 THR H2 H N N 520 THR HA H N N 521 THR HB H N N 522 THR HG1 H N N 523 THR HG21 H N N 524 THR HG22 H N N 525 THR HG23 H N N 526 THR HXT H N N 527 TRP N N N N 528 TRP CA C N S 529 TRP C C N N 530 TRP O O N N 531 TRP CB C N N 532 TRP CG C Y N 533 TRP CD1 C Y N 534 TRP CD2 C Y N 535 TRP NE1 N Y N 536 TRP CE2 C Y N 537 TRP CE3 C Y N 538 TRP CZ2 C Y N 539 TRP CZ3 C Y N 540 TRP CH2 C Y N 541 TRP OXT O N N 542 TRP H H N N 543 TRP H2 H N N 544 TRP HA H N N 545 TRP HB2 H N N 546 TRP HB3 H N N 547 TRP HD1 H N N 548 TRP HE1 H N N 549 TRP HE3 H N N 550 TRP HZ2 H N N 551 TRP HZ3 H N N 552 TRP HH2 H N N 553 TRP HXT H N N 554 TYR N N N N 555 TYR CA C N S 556 TYR C C N N 557 TYR O O N N 558 TYR CB C N N 559 TYR CG C Y N 560 TYR CD1 C Y N 561 TYR CD2 C Y N 562 TYR CE1 C Y N 563 TYR CE2 C Y N 564 TYR CZ C Y N 565 TYR OH O N N 566 TYR OXT O N N 567 TYR H H N N 568 TYR H2 H N N 569 TYR HA H N N 570 TYR HB2 H N N 571 TYR HB3 H N N 572 TYR HD1 H N N 573 TYR HD2 H N N 574 TYR HE1 H N N 575 TYR HE2 H N N 576 TYR HH H N N 577 TYR HXT H N N 578 VAL N N N N 579 VAL CA C N S 580 VAL C C N N 581 VAL O O N N 582 VAL CB C N N 583 VAL CG1 C N N 584 VAL CG2 C N N 585 VAL OXT O N N 586 VAL H H N N 587 VAL H2 H N N 588 VAL HA H N N 589 VAL HB H N N 590 VAL HG11 H N N 591 VAL HG12 H N N 592 VAL HG13 H N N 593 VAL HG21 H N N 594 VAL HG22 H N N 595 VAL HG23 H N N 596 VAL HXT H N N 597 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 4MF O3P P sing N N 1 4MF O3P HOP3 sing N N 2 4MF O2P P sing N N 3 4MF O2P HOP2 sing N N 4 4MF P O1P doub N N 5 4MF P "O5'" sing N N 6 4MF "O5'" "C5'" sing N N 7 4MF "C5'" "C4'" sing N N 8 4MF "C5'" "H5'1" sing N N 9 4MF "C5'" "H5'2" sing N N 10 4MF "C4'" "C3'" sing N N 11 4MF "C4'" "O4'" sing N N 12 4MF "C4'" "H4'" sing N N 13 4MF "C3'" "C2'" sing N N 14 4MF "C3'" "O3'" sing N N 15 4MF "C3'" "H3'" sing N N 16 4MF "O3'" H3T sing N N 17 4MF "C2'" "C1'" sing N N 18 4MF "C2'" "H2'1" sing N N 19 4MF "C2'" "H2'2" sing N N 20 4MF "C1'" N1 sing N N 21 4MF "C1'" "O4'" sing N N 22 4MF "C1'" "H1'" sing N N 23 4MF N1 C2 sing Y N 24 4MF N1 C7A sing Y N 25 4MF C7A C3A sing Y N 26 4MF C7A C7 doub Y N 27 4MF C7 C6 sing Y N 28 4MF C7 H7 sing N N 29 4MF C6 C5 doub Y N 30 4MF C6 H6 sing N N 31 4MF C5 C4 sing Y N 32 4MF C5 H5 sing N N 33 4MF C4 C4M sing N N 34 4MF C4 C3A doub Y N 35 4MF C4M H4M1 sing N N 36 4MF C4M H4M2 sing N N 37 4MF C4M H4M3 sing N N 38 4MF C3A C3 sing Y N 39 4MF C3 C2 doub Y N 40 4MF C3 H3 sing N N 41 4MF C2 H2 sing N N 42 AAB P O1P sing N N 43 AAB P O2P doub N N 44 AAB P O3P sing N N 45 AAB P "O5'" sing N N 46 AAB O1P H1P sing N N 47 AAB O3P H3P sing N N 48 AAB "O5'" "C5'" sing N N 49 AAB "C5'" "C4'" sing N N 50 AAB "C5'" "H5'1" sing N N 51 AAB "C5'" "H5'2" sing N N 52 AAB "C4'" "O4'" sing N N 53 AAB "C4'" "C3'" sing N N 54 AAB "C4'" "H4'" sing N N 55 AAB "O4'" "C1'" sing N N 56 AAB "C1'" "O1'" sing N N 57 AAB "C1'" "C2'" sing N N 58 AAB "C1'" "H1'" sing N N 59 AAB "O1'" "HO1'" sing N N 60 AAB "C2'" "C3'" sing N N 61 AAB "C2'" "H2'1" sing N N 62 AAB "C2'" "H2'2" sing N N 63 AAB "C3'" "O3'" sing N N 64 AAB "C3'" "H3'" sing N N 65 AAB "O3'" "HO3'" sing N N 66 ALA N CA sing N N 67 ALA N H sing N N 68 ALA N H2 sing N N 69 ALA CA C sing N N 70 ALA CA CB sing N N 71 ALA CA HA sing N N 72 ALA C O doub N N 73 ALA C OXT sing N N 74 ALA CB HB1 sing N N 75 ALA CB HB2 sing N N 76 ALA CB HB3 sing N N 77 ALA OXT HXT sing N N 78 ARG N CA sing N N 79 ARG N H sing N N 80 ARG N H2 sing N N 81 ARG CA C sing N N 82 ARG CA CB sing N N 83 ARG CA HA sing N N 84 ARG C O doub N N 85 ARG C OXT sing N N 86 ARG CB CG sing N N 87 ARG CB HB2 sing N N 88 ARG CB HB3 sing N N 89 ARG CG CD sing N N 90 ARG CG HG2 sing N N 91 ARG CG HG3 sing N N 92 ARG CD NE sing N N 93 ARG CD HD2 sing N N 94 ARG CD HD3 sing N N 95 ARG NE CZ sing N N 96 ARG NE HE sing N N 97 ARG CZ NH1 sing N N 98 ARG CZ NH2 doub N N 99 ARG NH1 HH11 sing N N 100 ARG NH1 HH12 sing N N 101 ARG NH2 HH21 sing N N 102 ARG NH2 HH22 sing N N 103 ARG OXT HXT sing N N 104 ASN N CA sing N N 105 ASN N H sing N N 106 ASN N H2 sing N N 107 ASN CA C sing N N 108 ASN CA CB sing N N 109 ASN CA HA sing N N 110 ASN C O doub N N 111 ASN C OXT sing N N 112 ASN CB CG sing N N 113 ASN CB HB2 sing N N 114 ASN CB HB3 sing N N 115 ASN CG OD1 doub N N 116 ASN CG ND2 sing N N 117 ASN ND2 HD21 sing N N 118 ASN ND2 HD22 sing N N 119 ASN OXT HXT sing N N 120 ASP N CA sing N N 121 ASP N H sing N N 122 ASP N H2 sing N N 123 ASP CA C sing N N 124 ASP CA CB sing N N 125 ASP CA HA sing N N 126 ASP C O doub N N 127 ASP C OXT sing N N 128 ASP CB CG sing N N 129 ASP CB HB2 sing N N 130 ASP CB HB3 sing N N 131 ASP CG OD1 doub N N 132 ASP CG OD2 sing N N 133 ASP OD2 HD2 sing N N 134 ASP OXT HXT sing N N 135 CYS N CA sing N N 136 CYS N H sing N N 137 CYS N H2 sing N N 138 CYS CA C sing N N 139 CYS CA CB sing N N 140 CYS CA HA sing N N 141 CYS C O doub N N 142 CYS C OXT sing N N 143 CYS CB SG sing N N 144 CYS CB HB2 sing N N 145 CYS CB HB3 sing N N 146 CYS SG HG sing N N 147 CYS OXT HXT sing N N 148 DA OP3 P sing N N 149 DA OP3 HOP3 sing N N 150 DA P OP1 doub N N 151 DA P OP2 sing N N 152 DA P "O5'" sing N N 153 DA OP2 HOP2 sing N N 154 DA "O5'" "C5'" sing N N 155 DA "C5'" "C4'" sing N N 156 DA "C5'" "H5'" sing N N 157 DA "C5'" "H5''" sing N N 158 DA "C4'" "O4'" sing N N 159 DA "C4'" "C3'" sing N N 160 DA "C4'" "H4'" sing N N 161 DA "O4'" "C1'" sing N N 162 DA "C3'" "O3'" sing N N 163 DA "C3'" "C2'" sing N N 164 DA "C3'" "H3'" sing N N 165 DA "O3'" "HO3'" sing N N 166 DA "C2'" "C1'" sing N N 167 DA "C2'" "H2'" sing N N 168 DA "C2'" "H2''" sing N N 169 DA "C1'" N9 sing N N 170 DA "C1'" "H1'" sing N N 171 DA N9 C8 sing Y N 172 DA N9 C4 sing Y N 173 DA C8 N7 doub Y N 174 DA C8 H8 sing N N 175 DA N7 C5 sing Y N 176 DA C5 C6 sing Y N 177 DA C5 C4 doub Y N 178 DA C6 N6 sing N N 179 DA C6 N1 doub Y N 180 DA N6 H61 sing N N 181 DA N6 H62 sing N N 182 DA N1 C2 sing Y N 183 DA C2 N3 doub Y N 184 DA C2 H2 sing N N 185 DA N3 C4 sing Y N 186 DC OP3 P sing N N 187 DC OP3 HOP3 sing N N 188 DC P OP1 doub N N 189 DC P OP2 sing N N 190 DC P "O5'" sing N N 191 DC OP2 HOP2 sing N N 192 DC "O5'" "C5'" sing N N 193 DC "C5'" "C4'" sing N N 194 DC "C5'" "H5'" sing N N 195 DC "C5'" "H5''" sing N N 196 DC "C4'" "O4'" sing N N 197 DC "C4'" "C3'" sing N N 198 DC "C4'" "H4'" sing N N 199 DC "O4'" "C1'" sing N N 200 DC "C3'" "O3'" sing N N 201 DC "C3'" "C2'" sing N N 202 DC "C3'" "H3'" sing N N 203 DC "O3'" "HO3'" sing N N 204 DC "C2'" "C1'" sing N N 205 DC "C2'" "H2'" sing N N 206 DC "C2'" "H2''" sing N N 207 DC "C1'" N1 sing N N 208 DC "C1'" "H1'" sing N N 209 DC N1 C2 sing N N 210 DC N1 C6 sing N N 211 DC C2 O2 doub N N 212 DC C2 N3 sing N N 213 DC N3 C4 doub N N 214 DC C4 N4 sing N N 215 DC C4 C5 sing N N 216 DC N4 H41 sing N N 217 DC N4 H42 sing N N 218 DC C5 C6 doub N N 219 DC C5 H5 sing N N 220 DC C6 H6 sing N N 221 DG OP3 P sing N N 222 DG OP3 HOP3 sing N N 223 DG P OP1 doub N N 224 DG P OP2 sing N N 225 DG P "O5'" sing N N 226 DG OP2 HOP2 sing N N 227 DG "O5'" "C5'" sing N N 228 DG "C5'" "C4'" sing N N 229 DG "C5'" "H5'" sing N N 230 DG "C5'" "H5''" sing N N 231 DG "C4'" "O4'" sing N N 232 DG "C4'" "C3'" sing N N 233 DG "C4'" "H4'" sing N N 234 DG "O4'" "C1'" sing N N 235 DG "C3'" "O3'" sing N N 236 DG "C3'" "C2'" sing N N 237 DG "C3'" "H3'" sing N N 238 DG "O3'" "HO3'" sing N N 239 DG "C2'" "C1'" sing N N 240 DG "C2'" "H2'" sing N N 241 DG "C2'" "H2''" sing N N 242 DG "C1'" N9 sing N N 243 DG "C1'" "H1'" sing N N 244 DG N9 C8 sing Y N 245 DG N9 C4 sing Y N 246 DG C8 N7 doub Y N 247 DG C8 H8 sing N N 248 DG N7 C5 sing Y N 249 DG C5 C6 sing N N 250 DG C5 C4 doub Y N 251 DG C6 O6 doub N N 252 DG C6 N1 sing N N 253 DG N1 C2 sing N N 254 DG N1 H1 sing N N 255 DG C2 N2 sing N N 256 DG C2 N3 doub N N 257 DG N2 H21 sing N N 258 DG N2 H22 sing N N 259 DG N3 C4 sing N N 260 DT OP3 P sing N N 261 DT OP3 HOP3 sing N N 262 DT P OP1 doub N N 263 DT P OP2 sing N N 264 DT P "O5'" sing N N 265 DT OP2 HOP2 sing N N 266 DT "O5'" "C5'" sing N N 267 DT "C5'" "C4'" sing N N 268 DT "C5'" "H5'" sing N N 269 DT "C5'" "H5''" sing N N 270 DT "C4'" "O4'" sing N N 271 DT "C4'" "C3'" sing N N 272 DT "C4'" "H4'" sing N N 273 DT "O4'" "C1'" sing N N 274 DT "C3'" "O3'" sing N N 275 DT "C3'" "C2'" sing N N 276 DT "C3'" "H3'" sing N N 277 DT "O3'" "HO3'" sing N N 278 DT "C2'" "C1'" sing N N 279 DT "C2'" "H2'" sing N N 280 DT "C2'" "H2''" sing N N 281 DT "C1'" N1 sing N N 282 DT "C1'" "H1'" sing N N 283 DT N1 C2 sing N N 284 DT N1 C6 sing N N 285 DT C2 O2 doub N N 286 DT C2 N3 sing N N 287 DT N3 C4 sing N N 288 DT N3 H3 sing N N 289 DT C4 O4 doub N N 290 DT C4 C5 sing N N 291 DT C5 C7 sing N N 292 DT C5 C6 doub N N 293 DT C7 H71 sing N N 294 DT C7 H72 sing N N 295 DT C7 H73 sing N N 296 DT C6 H6 sing N N 297 GLN N CA sing N N 298 GLN N H sing N N 299 GLN N H2 sing N N 300 GLN CA C sing N N 301 GLN CA CB sing N N 302 GLN CA HA sing N N 303 GLN C O doub N N 304 GLN C OXT sing N N 305 GLN CB CG sing N N 306 GLN CB HB2 sing N N 307 GLN CB HB3 sing N N 308 GLN CG CD sing N N 309 GLN CG HG2 sing N N 310 GLN CG HG3 sing N N 311 GLN CD OE1 doub N N 312 GLN CD NE2 sing N N 313 GLN NE2 HE21 sing N N 314 GLN NE2 HE22 sing N N 315 GLN OXT HXT sing N N 316 GLU N CA sing N N 317 GLU N H sing N N 318 GLU N H2 sing N N 319 GLU CA C sing N N 320 GLU CA CB sing N N 321 GLU CA HA sing N N 322 GLU C O doub N N 323 GLU C OXT sing N N 324 GLU CB CG sing N N 325 GLU CB HB2 sing N N 326 GLU CB HB3 sing N N 327 GLU CG CD sing N N 328 GLU CG HG2 sing N N 329 GLU CG HG3 sing N N 330 GLU CD OE1 doub N N 331 GLU CD OE2 sing N N 332 GLU OE2 HE2 sing N N 333 GLU OXT HXT sing N N 334 GLY N CA sing N N 335 GLY N H sing N N 336 GLY N H2 sing N N 337 GLY CA C sing N N 338 GLY CA HA2 sing N N 339 GLY CA HA3 sing N N 340 GLY C O doub N N 341 GLY C OXT sing N N 342 GLY OXT HXT sing N N 343 HIS N CA sing N N 344 HIS N H sing N N 345 HIS N H2 sing N N 346 HIS CA C sing N N 347 HIS CA CB sing N N 348 HIS CA HA sing N N 349 HIS C O doub N N 350 HIS C OXT sing N N 351 HIS CB CG sing N N 352 HIS CB HB2 sing N N 353 HIS CB HB3 sing N N 354 HIS CG ND1 sing Y N 355 HIS CG CD2 doub Y N 356 HIS ND1 CE1 doub Y N 357 HIS ND1 HD1 sing N N 358 HIS CD2 NE2 sing Y N 359 HIS CD2 HD2 sing N N 360 HIS CE1 NE2 sing Y N 361 HIS CE1 HE1 sing N N 362 HIS NE2 HE2 sing N N 363 HIS OXT HXT sing N N 364 HOH O H1 sing N N 365 HOH O H2 sing N N 366 ILE N CA sing N N 367 ILE N H sing N N 368 ILE N H2 sing N N 369 ILE CA C sing N N 370 ILE CA CB sing N N 371 ILE CA HA sing N N 372 ILE C O doub N N 373 ILE C OXT sing N N 374 ILE CB CG1 sing N N 375 ILE CB CG2 sing N N 376 ILE CB HB sing N N 377 ILE CG1 CD1 sing N N 378 ILE CG1 HG12 sing N N 379 ILE CG1 HG13 sing N N 380 ILE CG2 HG21 sing N N 381 ILE CG2 HG22 sing N N 382 ILE CG2 HG23 sing N N 383 ILE CD1 HD11 sing N N 384 ILE CD1 HD12 sing N N 385 ILE CD1 HD13 sing N N 386 ILE OXT HXT sing N N 387 LEU N CA sing N N 388 LEU N H sing N N 389 LEU N H2 sing N N 390 LEU CA C sing N N 391 LEU CA CB sing N N 392 LEU CA HA sing N N 393 LEU C O doub N N 394 LEU C OXT sing N N 395 LEU CB CG sing N N 396 LEU CB HB2 sing N N 397 LEU CB HB3 sing N N 398 LEU CG CD1 sing N N 399 LEU CG CD2 sing N N 400 LEU CG HG sing N N 401 LEU CD1 HD11 sing N N 402 LEU CD1 HD12 sing N N 403 LEU CD1 HD13 sing N N 404 LEU CD2 HD21 sing N N 405 LEU CD2 HD22 sing N N 406 LEU CD2 HD23 sing N N 407 LEU OXT HXT sing N N 408 LYS N CA sing N N 409 LYS N H sing N N 410 LYS N H2 sing N N 411 LYS CA C sing N N 412 LYS CA CB sing N N 413 LYS CA HA sing N N 414 LYS C O doub N N 415 LYS C OXT sing N N 416 LYS CB CG sing N N 417 LYS CB HB2 sing N N 418 LYS CB HB3 sing N N 419 LYS CG CD sing N N 420 LYS CG HG2 sing N N 421 LYS CG HG3 sing N N 422 LYS CD CE sing N N 423 LYS CD HD2 sing N N 424 LYS CD HD3 sing N N 425 LYS CE NZ sing N N 426 LYS CE HE2 sing N N 427 LYS CE HE3 sing N N 428 LYS NZ HZ1 sing N N 429 LYS NZ HZ2 sing N N 430 LYS NZ HZ3 sing N N 431 LYS OXT HXT sing N N 432 MET N CA sing N N 433 MET N H sing N N 434 MET N H2 sing N N 435 MET CA C sing N N 436 MET CA CB sing N N 437 MET CA HA sing N N 438 MET C O doub N N 439 MET C OXT sing N N 440 MET CB CG sing N N 441 MET CB HB2 sing N N 442 MET CB HB3 sing N N 443 MET CG SD sing N N 444 MET CG HG2 sing N N 445 MET CG HG3 sing N N 446 MET SD CE sing N N 447 MET CE HE1 sing N N 448 MET CE HE2 sing N N 449 MET CE HE3 sing N N 450 MET OXT HXT sing N N 451 PHE N CA sing N N 452 PHE N H sing N N 453 PHE N H2 sing N N 454 PHE CA C sing N N 455 PHE CA CB sing N N 456 PHE CA HA sing N N 457 PHE C O doub N N 458 PHE C OXT sing N N 459 PHE CB CG sing N N 460 PHE CB HB2 sing N N 461 PHE CB HB3 sing N N 462 PHE CG CD1 doub Y N 463 PHE CG CD2 sing Y N 464 PHE CD1 CE1 sing Y N 465 PHE CD1 HD1 sing N N 466 PHE CD2 CE2 doub Y N 467 PHE CD2 HD2 sing N N 468 PHE CE1 CZ doub Y N 469 PHE CE1 HE1 sing N N 470 PHE CE2 CZ sing Y N 471 PHE CE2 HE2 sing N N 472 PHE CZ HZ sing N N 473 PHE OXT HXT sing N N 474 PRO N CA sing N N 475 PRO N CD sing N N 476 PRO N H sing N N 477 PRO CA C sing N N 478 PRO CA CB sing N N 479 PRO CA HA sing N N 480 PRO C O doub N N 481 PRO C OXT sing N N 482 PRO CB CG sing N N 483 PRO CB HB2 sing N N 484 PRO CB HB3 sing N N 485 PRO CG CD sing N N 486 PRO CG HG2 sing N N 487 PRO CG HG3 sing N N 488 PRO CD HD2 sing N N 489 PRO CD HD3 sing N N 490 PRO OXT HXT sing N N 491 SER N CA sing N N 492 SER N H sing N N 493 SER N H2 sing N N 494 SER CA C sing N N 495 SER CA CB sing N N 496 SER CA HA sing N N 497 SER C O doub N N 498 SER C OXT sing N N 499 SER CB OG sing N N 500 SER CB HB2 sing N N 501 SER CB HB3 sing N N 502 SER OG HG sing N N 503 SER OXT HXT sing N N 504 THR N CA sing N N 505 THR N H sing N N 506 THR N H2 sing N N 507 THR CA C sing N N 508 THR CA CB sing N N 509 THR CA HA sing N N 510 THR C O doub N N 511 THR C OXT sing N N 512 THR CB OG1 sing N N 513 THR CB CG2 sing N N 514 THR CB HB sing N N 515 THR OG1 HG1 sing N N 516 THR CG2 HG21 sing N N 517 THR CG2 HG22 sing N N 518 THR CG2 HG23 sing N N 519 THR OXT HXT sing N N 520 TRP N CA sing N N 521 TRP N H sing N N 522 TRP N H2 sing N N 523 TRP CA C sing N N 524 TRP CA CB sing N N 525 TRP CA HA sing N N 526 TRP C O doub N N 527 TRP C OXT sing N N 528 TRP CB CG sing N N 529 TRP CB HB2 sing N N 530 TRP CB HB3 sing N N 531 TRP CG CD1 doub Y N 532 TRP CG CD2 sing Y N 533 TRP CD1 NE1 sing Y N 534 TRP CD1 HD1 sing N N 535 TRP CD2 CE2 doub Y N 536 TRP CD2 CE3 sing Y N 537 TRP NE1 CE2 sing Y N 538 TRP NE1 HE1 sing N N 539 TRP CE2 CZ2 sing Y N 540 TRP CE3 CZ3 doub Y N 541 TRP CE3 HE3 sing N N 542 TRP CZ2 CH2 doub Y N 543 TRP CZ2 HZ2 sing N N 544 TRP CZ3 CH2 sing Y N 545 TRP CZ3 HZ3 sing N N 546 TRP CH2 HH2 sing N N 547 TRP OXT HXT sing N N 548 TYR N CA sing N N 549 TYR N H sing N N 550 TYR N H2 sing N N 551 TYR CA C sing N N 552 TYR CA CB sing N N 553 TYR CA HA sing N N 554 TYR C O doub N N 555 TYR C OXT sing N N 556 TYR CB CG sing N N 557 TYR CB HB2 sing N N 558 TYR CB HB3 sing N N 559 TYR CG CD1 doub Y N 560 TYR CG CD2 sing Y N 561 TYR CD1 CE1 sing Y N 562 TYR CD1 HD1 sing N N 563 TYR CD2 CE2 doub Y N 564 TYR CD2 HD2 sing N N 565 TYR CE1 CZ doub Y N 566 TYR CE1 HE1 sing N N 567 TYR CE2 CZ sing Y N 568 TYR CE2 HE2 sing N N 569 TYR CZ OH sing N N 570 TYR OH HH sing N N 571 TYR OXT HXT sing N N 572 VAL N CA sing N N 573 VAL N H sing N N 574 VAL N H2 sing N N 575 VAL CA C sing N N 576 VAL CA CB sing N N 577 VAL CA HA sing N N 578 VAL C O doub N N 579 VAL C OXT sing N N 580 VAL CB CG1 sing N N 581 VAL CB CG2 sing N N 582 VAL CB HB sing N N 583 VAL CG1 HG11 sing N N 584 VAL CG1 HG12 sing N N 585 VAL CG1 HG13 sing N N 586 VAL CG2 HG21 sing N N 587 VAL CG2 HG22 sing N N 588 VAL CG2 HG23 sing N N 589 VAL OXT HXT sing N N 590 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 2OYT 'double helix' 2OYT 'b-form double helix' 2OYT 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DT 1 1_555 C DA 10 1_555 -0.192 -0.152 -0.118 -10.623 -9.230 -2.880 1 B_DT2:DA30_C B 2 ? C 30 ? 20 1 1 B DG 2 1_555 C DC 9 1_555 -0.347 -0.222 0.101 -5.208 4.192 0.983 2 B_DG3:DC29_C B 3 ? C 29 ? 19 1 1 B DT 3 1_555 C DA 8 1_555 0.007 -0.121 -0.464 22.568 2.078 5.132 3 B_DT4:DA28_C B 4 ? C 28 ? 20 1 1 B DA 5 1_555 C DT 6 1_555 -0.104 -0.135 -0.127 -10.637 -10.762 4.182 4 B_DA6:DT26_C B 6 ? C 26 ? 20 1 1 B DT 6 1_555 C DA 5 1_555 -0.022 -0.190 -0.004 -2.482 -12.556 1.278 5 B_DT7:DA25_C B 7 ? C 25 ? 20 1 1 B DC 7 1_555 C DG 4 1_555 0.375 -0.233 -0.143 -0.749 -13.715 -0.547 6 B_DC8:DG24_C B 8 ? C 24 ? 19 1 1 B DT 8 1_555 C DA 3 1_555 0.251 -0.222 0.124 -4.207 -10.268 2.151 7 B_DT9:DA23_C B 9 ? C 23 ? 20 1 1 B DT 9 1_555 C DA 2 1_555 -0.051 -0.063 -0.244 8.704 -4.181 9.772 8 B_DT10:DA22_C B 10 ? C 22 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DT 1 1_555 C DA 10 1_555 B DG 2 1_555 C DC 9 1_555 0.444 -1.180 3.092 1.782 7.683 30.311 -3.503 -0.517 2.739 14.390 -3.337 31.297 1 BB_DT2DG3:DC29DA30_CC B 2 ? C 30 ? B 3 ? C 29 ? 1 B DG 2 1_555 C DC 9 1_555 B DT 3 1_555 C DA 8 1_555 -0.399 -0.506 2.789 5.985 4.828 25.147 -2.186 2.207 2.490 10.772 -13.354 26.278 2 BB_DG3DT4:DA28DC29_CC B 3 ? C 29 ? B 4 ? C 28 ? 1 B DA 5 1_555 C DT 6 1_555 B DT 6 1_555 C DA 5 1_555 -0.380 -0.558 3.081 -0.491 2.255 28.802 -1.588 0.659 3.036 4.525 0.985 28.892 3 BB_DA6DT7:DA25DT26_CC B 6 ? C 26 ? B 7 ? C 25 ? 1 B DT 6 1_555 C DA 5 1_555 B DC 7 1_555 C DG 4 1_555 0.079 0.076 3.152 1.906 4.121 37.313 -0.401 0.117 3.142 6.411 -2.965 37.578 4 BB_DT7DC8:DG24DA25_CC B 7 ? C 25 ? B 8 ? C 24 ? 1 B DC 7 1_555 C DG 4 1_555 B DT 8 1_555 C DA 3 1_555 0.994 -0.047 3.332 1.063 6.547 35.443 -1.025 -1.452 3.299 10.639 -1.727 36.039 5 BB_DC8DT9:DA23DG24_CC B 8 ? C 24 ? B 9 ? C 23 ? 1 B DT 8 1_555 C DA 3 1_555 B DT 9 1_555 C DA 2 1_555 0.728 0.207 2.978 4.762 2.646 29.564 -0.107 -0.496 3.061 5.129 -9.233 30.051 6 BB_DT9DT10:DA22DA23_CC B 9 ? C 23 ? B 10 ? C 22 ? # _pdbx_entity_nonpoly.entity_id 4 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1EMH _pdbx_initial_refinement_model.details ? #