HEADER TRANSCRIPTION 28-FEB-07 2P0K TITLE CRYSTAL STRUCTURE OF SCMH1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: POLYCOMB PROTEIN SCMH1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: SEX COMB ON MIDLEG HOMOLOG 1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SCMH1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28A-MHL KEYWDS SCMH1, STRUCTURAL GENOMICS, STRUCTURAL GENOMICS CONSORTIUM, SGC, KEYWDS 2 TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR N.HERZANYCH,G.SENISTERRA,Y.LIU,L.CROMBET,P.LOPPNAU,I.KOZIERADZKI, AUTHOR 2 M.VEDADI,J.WEIGELT,M.SUNDSTROM,C.H.ARROWSMITH,A.M.EDWARDS, AUTHOR 3 A.BOCHKAREV,J.MIN,STRUCTURAL GENOMICS CONSORTIUM (SGC) REVDAT 4 30-AUG-23 2P0K 1 REMARK REVDAT 3 13-JUL-11 2P0K 1 VERSN REVDAT 2 24-FEB-09 2P0K 1 VERSN REVDAT 1 27-MAR-07 2P0K 0 JRNL AUTH N.HERZANYCH,G.SENISTERRA,Y.LIU,L.CROMBET,P.LOPPNAU, JRNL AUTH 2 I.KOZIERADZKI,M.VEDADI,J.WEIGELT,M.SUNDSTROM,C.H.ARROWSMITH, JRNL AUTH 3 A.M.EDWARDS,A.BOCHKAREV,J.MIN JRNL TITL STRUCTURE OF SCMH1 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 83.05 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 21905 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.171 REMARK 3 R VALUE (WORKING SET) : 0.169 REMARK 3 FREE R VALUE : 0.204 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1183 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.75 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.79 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1475 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 93.55 REMARK 3 BIN R VALUE (WORKING SET) : 0.2700 REMARK 3 BIN FREE R VALUE SET COUNT : 78 REMARK 3 BIN FREE R VALUE : 0.3430 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1654 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 16 REMARK 3 SOLVENT ATOMS : 208 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.11 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.90000 REMARK 3 B22 (A**2) : -0.90000 REMARK 3 B33 (A**2) : 1.35000 REMARK 3 B12 (A**2) : -0.45000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.111 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.108 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.073 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.327 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.968 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.954 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1778 ; 0.014 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2429 ; 1.396 ; 1.951 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 220 ; 5.740 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 79 ;33.687 ;23.291 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 284 ;13.696 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;21.098 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 250 ; 0.095 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1394 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 875 ; 0.212 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1234 ; 0.308 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 177 ; 0.154 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 52 ; 0.209 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 27 ; 0.108 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1108 ; 0.818 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1765 ; 1.300 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 783 ; 2.012 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 664 ; 3.081 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 15 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 27 A 31 REMARK 3 ORIGIN FOR THE GROUP (A): 22.3132 74.1664 27.0990 REMARK 3 T TENSOR REMARK 3 T11: 0.1360 T22: -0.0499 REMARK 3 T33: 0.0576 T12: 0.0393 REMARK 3 T13: -0.2467 T23: -0.0678 REMARK 3 L TENSOR REMARK 3 L11: 33.0802 L22: 16.6825 REMARK 3 L33: 12.8900 L12: 17.3666 REMARK 3 L13: -2.7308 L23: 2.7932 REMARK 3 S TENSOR REMARK 3 S11: 0.8035 S12: -1.7590 S13: 0.5778 REMARK 3 S21: 1.5761 S22: -0.5589 S23: -0.6505 REMARK 3 S31: 0.1223 S32: 0.1976 S33: -0.2445 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 32 A 52 REMARK 3 ORIGIN FOR THE GROUP (A): 14.9081 66.0877 22.5073 REMARK 3 T TENSOR REMARK 3 T11: 0.0408 T22: 0.0434 REMARK 3 T33: 0.0417 T12: 0.0505 REMARK 3 T13: -0.0152 T23: -0.0253 REMARK 3 L TENSOR REMARK 3 L11: 1.9976 L22: 2.5696 REMARK 3 L33: 1.0474 L12: -0.8212 REMARK 3 L13: 1.0852 L23: -1.4570 REMARK 3 S TENSOR REMARK 3 S11: -0.2521 S12: -0.3403 S13: 0.2285 REMARK 3 S21: 0.0655 S22: 0.1672 S23: -0.0228 REMARK 3 S31: -0.0508 S32: -0.1132 S33: 0.0849 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 53 A 63 REMARK 3 ORIGIN FOR THE GROUP (A): 30.1911 47.7693 34.4002 REMARK 3 T TENSOR REMARK 3 T11: 0.0064 T22: 0.0417 REMARK 3 T33: 0.0659 T12: 0.0012 REMARK 3 T13: -0.0503 T23: 0.0240 REMARK 3 L TENSOR REMARK 3 L11: 7.3464 L22: 1.2973 REMARK 3 L33: 1.0944 L12: -3.0532 REMARK 3 L13: -0.0262 L23: -0.1654 REMARK 3 S TENSOR REMARK 3 S11: -0.0646 S12: -0.0985 S13: 0.1192 REMARK 3 S21: 0.2355 S22: 0.1184 S23: -0.1085 REMARK 3 S31: 0.1000 S32: -0.1714 S33: -0.0538 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 64 A 72 REMARK 3 ORIGIN FOR THE GROUP (A): 33.6465 43.3851 17.5719 REMARK 3 T TENSOR REMARK 3 T11: 0.0018 T22: 0.1793 REMARK 3 T33: 0.0445 T12: -0.0670 REMARK 3 T13: -0.1184 T23: 0.1418 REMARK 3 L TENSOR REMARK 3 L11: 3.2858 L22: 4.3071 REMARK 3 L33: 9.7842 L12: 0.8555 REMARK 3 L13: -5.1084 L23: -4.0730 REMARK 3 S TENSOR REMARK 3 S11: 0.2516 S12: 0.4722 S13: 0.5620 REMARK 3 S21: -0.1039 S22: 0.3219 S23: 0.4425 REMARK 3 S31: 0.2225 S32: -0.3597 S33: -0.5734 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 73 A 97 REMARK 3 ORIGIN FOR THE GROUP (A): 36.6229 47.9032 24.7260 REMARK 3 T TENSOR REMARK 3 T11: -0.0186 T22: 0.0566 REMARK 3 T33: 0.1009 T12: -0.0119 REMARK 3 T13: -0.0566 T23: 0.0715 REMARK 3 L TENSOR REMARK 3 L11: 1.6421 L22: 0.6541 REMARK 3 L33: 2.1837 L12: -1.0303 REMARK 3 L13: -0.4702 L23: 0.1695 REMARK 3 S TENSOR REMARK 3 S11: -0.0405 S12: 0.3079 S13: 0.5944 REMARK 3 S21: 0.0565 S22: 0.0599 S23: -0.0862 REMARK 3 S31: 0.1957 S32: 0.0335 S33: -0.0194 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 98 A 116 REMARK 3 ORIGIN FOR THE GROUP (A): 30.9708 46.1799 23.8058 REMARK 3 T TENSOR REMARK 3 T11: 0.0053 T22: 0.0588 REMARK 3 T33: 0.0697 T12: -0.0010 REMARK 3 T13: -0.0468 T23: 0.0653 REMARK 3 L TENSOR REMARK 3 L11: 1.3304 L22: 1.5868 REMARK 3 L33: 0.4995 L12: -0.7187 REMARK 3 L13: 0.8003 L23: -0.5799 REMARK 3 S TENSOR REMARK 3 S11: -0.0206 S12: 0.1779 S13: 0.2459 REMARK 3 S21: -0.0911 S22: 0.0271 S23: -0.1029 REMARK 3 S31: 0.1448 S32: 0.0064 S33: -0.0065 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 117 A 132 REMARK 3 ORIGIN FOR THE GROUP (A): 39.0002 35.7789 18.1957 REMARK 3 T TENSOR REMARK 3 T11: 0.0777 T22: 0.0699 REMARK 3 T33: -0.0986 T12: 0.0009 REMARK 3 T13: -0.0795 T23: 0.0080 REMARK 3 L TENSOR REMARK 3 L11: 8.5772 L22: 2.5617 REMARK 3 L33: 1.6734 L12: 3.1406 REMARK 3 L13: -1.4350 L23: -1.2532 REMARK 3 S TENSOR REMARK 3 S11: -0.2541 S12: 0.4876 S13: 0.1437 REMARK 3 S21: -0.4117 S22: 0.1049 S23: 0.0923 REMARK 3 S31: 0.1901 S32: -0.1011 S33: 0.1492 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 133 A 147 REMARK 3 ORIGIN FOR THE GROUP (A): 44.4072 33.8452 24.3852 REMARK 3 T TENSOR REMARK 3 T11: 0.0665 T22: 0.0505 REMARK 3 T33: -0.0320 T12: -0.0096 REMARK 3 T13: -0.0433 T23: 0.0124 REMARK 3 L TENSOR REMARK 3 L11: 2.1171 L22: 2.1680 REMARK 3 L33: 10.8259 L12: -0.7354 REMARK 3 L13: -3.0368 L23: 2.5417 REMARK 3 S TENSOR REMARK 3 S11: -0.0233 S12: 0.1116 S13: 0.1236 REMARK 3 S21: -0.1729 S22: 0.1157 S23: 0.1038 REMARK 3 S31: -0.0474 S32: -0.0720 S33: -0.0924 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 148 A 154 REMARK 3 ORIGIN FOR THE GROUP (A): 29.5048 39.7081 35.2382 REMARK 3 T TENSOR REMARK 3 T11: 0.0358 T22: 0.0426 REMARK 3 T33: 0.0260 T12: -0.0098 REMARK 3 T13: -0.0456 T23: 0.0163 REMARK 3 L TENSOR REMARK 3 L11: 8.8142 L22: 1.6203 REMARK 3 L33: 1.1826 L12: -0.8812 REMARK 3 L13: -0.5735 L23: -0.2257 REMARK 3 S TENSOR REMARK 3 S11: 0.0857 S12: -0.2653 S13: 0.3501 REMARK 3 S21: 0.1039 S22: 0.1098 S23: 0.0387 REMARK 3 S31: 0.3447 S32: -0.0690 S33: -0.1955 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 155 A 161 REMARK 3 ORIGIN FOR THE GROUP (A): 18.0983 45.8781 26.4377 REMARK 3 T TENSOR REMARK 3 T11: -0.0079 T22: 0.0723 REMARK 3 T33: 0.0627 T12: -0.0150 REMARK 3 T13: -0.0163 T23: 0.0966 REMARK 3 L TENSOR REMARK 3 L11: 24.2958 L22: 5.4128 REMARK 3 L33: 11.7616 L12: -11.3423 REMARK 3 L13: 16.0701 L23: -7.1371 REMARK 3 S TENSOR REMARK 3 S11: 0.2104 S12: -1.0420 S13: -0.6038 REMARK 3 S21: -0.1796 S22: 0.3496 S23: 0.2343 REMARK 3 S31: 0.1626 S32: -0.7362 S33: -0.5600 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 162 A 177 REMARK 3 ORIGIN FOR THE GROUP (A): 15.4054 61.5402 15.7024 REMARK 3 T TENSOR REMARK 3 T11: 0.0269 T22: 0.0286 REMARK 3 T33: 0.0333 T12: 0.0024 REMARK 3 T13: 0.0068 T23: 0.0342 REMARK 3 L TENSOR REMARK 3 L11: 1.2153 L22: 2.0084 REMARK 3 L33: 0.5097 L12: -0.3470 REMARK 3 L13: 0.5450 L23: -0.8673 REMARK 3 S TENSOR REMARK 3 S11: -0.1545 S12: 0.0966 S13: 0.0495 REMARK 3 S21: -0.0983 S22: 0.0266 S23: -0.1190 REMARK 3 S31: -0.0466 S32: -0.0371 S33: 0.1279 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 178 A 182 REMARK 3 ORIGIN FOR THE GROUP (A): 34.0013 60.4245 19.0628 REMARK 3 T TENSOR REMARK 3 T11: -0.1271 T22: 0.0831 REMARK 3 T33: 0.2477 T12: -0.0288 REMARK 3 T13: -0.0076 T23: 0.1155 REMARK 3 L TENSOR REMARK 3 L11: 14.6856 L22: 9.3907 REMARK 3 L33: 16.3118 L12: -0.8282 REMARK 3 L13: 9.3912 L23: 9.2837 REMARK 3 S TENSOR REMARK 3 S11: -0.2081 S12: 1.2850 S13: 0.1038 REMARK 3 S21: -0.0308 S22: -0.2665 S23: -0.5043 REMARK 3 S31: -0.3503 S32: 0.8223 S33: 0.4745 REMARK 3 REMARK 3 TLS GROUP : 13 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 183 A 203 REMARK 3 ORIGIN FOR THE GROUP (A): 21.6888 63.5476 12.3721 REMARK 3 T TENSOR REMARK 3 T11: 0.0191 T22: 0.0145 REMARK 3 T33: 0.0769 T12: -0.0180 REMARK 3 T13: 0.0107 T23: 0.0615 REMARK 3 L TENSOR REMARK 3 L11: 1.9090 L22: 1.2121 REMARK 3 L33: 0.6162 L12: -0.3456 REMARK 3 L13: 0.7875 L23: -0.4359 REMARK 3 S TENSOR REMARK 3 S11: -0.1276 S12: 0.1922 S13: 0.1494 REMARK 3 S21: -0.1766 S22: -0.0804 S23: -0.3383 REMARK 3 S31: -0.0481 S32: 0.0663 S33: 0.2081 REMARK 3 REMARK 3 TLS GROUP : 14 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 204 A 223 REMARK 3 ORIGIN FOR THE GROUP (A): 23.0449 60.4532 14.7160 REMARK 3 T TENSOR REMARK 3 T11: -0.0023 T22: 0.0385 REMARK 3 T33: 0.1001 T12: -0.0006 REMARK 3 T13: 0.0139 T23: 0.0331 REMARK 3 L TENSOR REMARK 3 L11: 0.5206 L22: 0.9544 REMARK 3 L33: 1.0827 L12: -0.5411 REMARK 3 L13: 0.0519 L23: -0.1818 REMARK 3 S TENSOR REMARK 3 S11: -0.0543 S12: 0.0615 S13: 0.0987 REMARK 3 S21: 0.0198 S22: -0.0175 S23: -0.3336 REMARK 3 S31: -0.0034 S32: 0.0492 S33: 0.0719 REMARK 3 REMARK 3 TLS GROUP : 15 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 224 A 235 REMARK 3 ORIGIN FOR THE GROUP (A): 25.4291 63.7392 27.7038 REMARK 3 T TENSOR REMARK 3 T11: 0.0449 T22: -0.0031 REMARK 3 T33: 0.0477 T12: 0.0343 REMARK 3 T13: -0.0656 T23: 0.0193 REMARK 3 L TENSOR REMARK 3 L11: 4.5070 L22: 5.2107 REMARK 3 L33: 6.3861 L12: 0.9591 REMARK 3 L13: -1.8821 L23: -5.5466 REMARK 3 S TENSOR REMARK 3 S11: -0.3486 S12: -0.3513 S13: 0.3109 REMARK 3 S21: 0.2331 S22: -0.0736 S23: -0.2890 REMARK 3 S31: -0.3351 S32: 0.0022 S33: 0.4222 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2P0K COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-MAR-07. REMARK 100 THE DEPOSITION ID IS D_1000041815. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-DEC-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 17-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23100 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : 83.050 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 4.800 REMARK 200 R MERGE (I) : 0.05200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 2BIV REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.17 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.37 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG3350, 0.2M AMMONIUM CITRATE, PH REMARK 280 7.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 300K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 21.80100 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 21.80100 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 21.80100 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4170 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 31000 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -175.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 95.73500 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 47.86750 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 82.90894 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 CL CL A 306 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 477 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 507 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 534 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 555 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 236 REMARK 465 THR A 237 REMARK 465 LYS A 238 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS A 27 CB CG ND1 CD2 CE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 518 O HOH A 608 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 61 -15.96 91.46 REMARK 500 ASN A 71 71.71 -167.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 402 DBREF 2P0K A 27 238 UNP Q96GD3 SCMH1_HUMAN 27 238 SEQRES 1 A 212 HIS PHE THR TRP ASP LYS TYR LEU LYS GLU THR CYS SER SEQRES 2 A 212 VAL PRO ALA PRO VAL HIS CYS PHE LYS GLN SER TYR THR SEQRES 3 A 212 PRO PRO SER ASN GLU PHE LYS ILE SER MET LYS LEU GLU SEQRES 4 A 212 ALA GLN ASP PRO ARG ASN THR THR SER THR CYS ILE ALA SEQRES 5 A 212 THR VAL VAL GLY LEU THR GLY ALA ARG LEU ARG LEU ARG SEQRES 6 A 212 LEU ASP GLY SER ASP ASN LYS ASN ASP PHE TRP ARG LEU SEQRES 7 A 212 VAL ASP SER ALA GLU ILE GLN PRO ILE GLY ASN CYS GLU SEQRES 8 A 212 LYS ASN GLY GLY MET LEU GLN PRO PRO LEU GLY PHE ARG SEQRES 9 A 212 LEU ASN ALA SER SER TRP PRO MET PHE LEU LEU LYS THR SEQRES 10 A 212 LEU ASN GLY ALA GLU MET ALA PRO ILE ARG ILE PHE HIS SEQRES 11 A 212 LYS GLU PRO PRO SER PRO SER HIS ASN PHE PHE LYS MET SEQRES 12 A 212 GLY MET LYS LEU GLU ALA VAL ASP ARG LYS ASN PRO HIS SEQRES 13 A 212 PHE ILE CYS PRO ALA THR ILE GLY GLU VAL ARG GLY SER SEQRES 14 A 212 GLU VAL LEU VAL THR PHE ASP GLY TRP ARG GLY ALA PHE SEQRES 15 A 212 ASP TYR TRP CYS ARG PHE ASP SER ARG ASP ILE PHE PRO SEQRES 16 A 212 VAL GLY TRP CYS SER LEU THR GLY ASP ASN LEU GLN PRO SEQRES 17 A 212 PRO GLY THR LYS HET CL A 301 1 HET CL A 302 1 HET CL A 303 1 HET CL A 304 1 HET CL A 305 1 HET CL A 306 1 HET PO4 A 401 5 HET PO4 A 402 5 HETNAM CL CHLORIDE ION HETNAM PO4 PHOSPHATE ION FORMUL 2 CL 6(CL 1-) FORMUL 8 PO4 2(O4 P 3-) FORMUL 10 HOH *208(H2 O) HELIX 1 1 THR A 29 THR A 37 1 9 HELIX 2 2 PRO A 43 PHE A 47 5 5 HELIX 3 3 GLY A 114 ASN A 119 1 6 HELIX 4 4 ASN A 132 SER A 134 5 3 HELIX 5 5 SER A 135 ASN A 145 1 11 HELIX 6 6 PRO A 151 PHE A 155 5 5 HELIX 7 7 GLY A 223 GLY A 229 1 7 SHEET 1 A 5 PHE A 101 LEU A 104 0 SHEET 2 A 5 ARG A 87 LEU A 92 -1 N LEU A 90 O PHE A 101 SHEET 3 A 5 ASN A 71 THR A 84 -1 N VAL A 81 O ARG A 89 SHEET 4 A 5 LYS A 63 ASP A 68 -1 N ALA A 66 O CYS A 76 SHEET 5 A 5 ILE A 110 GLN A 111 -1 O GLN A 111 N GLU A 65 SHEET 1 B 5 TYR A 210 ARG A 213 0 SHEET 2 B 5 GLU A 196 PHE A 201 -1 N VAL A 199 O TYR A 210 SHEET 3 B 5 ILE A 184 ARG A 193 -1 N GLY A 190 O LEU A 198 SHEET 4 B 5 LYS A 172 VAL A 176 -1 N ALA A 175 O CYS A 185 SHEET 5 B 5 ILE A 219 PHE A 220 -1 O PHE A 220 N GLU A 174 SITE 1 AC1 2 ASN A 115 LYS A 118 SITE 1 AC2 2 ASN A 145 HOH A 584 SITE 1 AC3 3 LYS A 142 GLY A 194 HOH A 445 SITE 1 AC4 4 PHE A 47 PRO A 160 HOH A 484 HOH A 593 SITE 1 AC5 6 LYS A 63 ASP A 93 LYS A 168 MET A 169 SITE 2 AC5 6 PO4 A 401 HOH A 557 SITE 1 AC6 1 MET A 138 SITE 1 AC7 8 ASP A 93 GLY A 94 ARG A 130 PHE A 139 SITE 2 AC7 8 GLU A 191 VAL A 192 CL A 305 HOH A 560 SITE 1 AC8 9 MET A 149 ALA A 150 PRO A 151 SER A 161 SITE 2 AC8 9 ARG A 213 ASP A 215 HOH A 424 HOH A 512 SITE 3 AC8 9 HOH A 598 CRYST1 95.735 95.735 43.602 90.00 90.00 120.00 P 63 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010446 0.006031 0.000000 0.00000 SCALE2 0.000000 0.012061 0.000000 0.00000 SCALE3 0.000000 0.000000 0.022935 0.00000