HEADER OXIDOREDUCTASE 28-FEB-07 2P0M TITLE REVISED STRUCTURE OF RABBIT RETICULOCYTE 15S-LIPOXYGENASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ARACHIDONATE 15-LIPOXYGENASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: 15S-LIPOXYGENASE, OMEGA-6 LIPOXYGENASE, ERYTHROID CELL- COMPND 5 SPECIFIC 15-LIPOXYGENASE, 15-LOX; COMPND 6 EC: 1.13.11.33 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ORYCTOLAGUS CUNICULUS; SOURCE 3 ORGANISM_COMMON: RABBIT; SOURCE 4 ORGANISM_TAXID: 9986 KEYWDS RABBIT, 15S-LIPOXYGENASE, TWIN, PSEUDO SYMMETRY, CONFORMATIONAL KEYWDS 2 CHANGE, ARACHIDONATE, IRON, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR J.CHOI,J.K.CHON,S.KIM,W.SHIN REVDAT 5 13-MAR-24 2P0M 1 REMARK LINK REVDAT 4 28-SEP-11 2P0M 1 REMARK REVDAT 3 13-JUL-11 2P0M 1 VERSN REVDAT 2 24-FEB-09 2P0M 1 VERSN REVDAT 1 09-OCT-07 2P0M 0 JRNL AUTH J.CHOI,J.K.CHON,S.KIM,W.SHIN JRNL TITL CONFORMATIONAL FLEXIBILITY IN MAMMALIAN 15S-LIPOXYGENASE: JRNL TITL 2 REINTERPRETATION OF THE CRYSTALLOGRAPHIC DATA. JRNL REF PROTEINS V. 70 1023 2008 JRNL REFN ISSN 0887-3585 JRNL PMID 17847087 JRNL DOI 10.1002/PROT.21590 REMARK 0 REMARK 0 THIS ENTRY 2P0M REFLECTS AN ALTERNATIVE MODELING OF THE REMARK 0 STRUCTURAL DATA IN R1LOXSF, REMARK 0 ORIGINAL DATA DETERMINED BY AUTHOR: REMARK 0 S.A.GILLMOR,A.VILLASENOR,R.J.FLETTERICK,E.SIGAL,M.F.BROWNER REMARK 0 ORIGINAL DATA REFERENCE 1 REMARK 0 PDB ID: 1LOX REMARK 0 AUTH S.A.GILLMOR,A.VILLASENOR,R.FLETTERICK,E.SIGAL,M.F.BROWNER REMARK 0 TITL THE STRUCTURE OF MAMMALIAN 15-LIPOXYGENASE REVEALS REMARK 0 TITL 2 SIMILARITY TO THE LIPASES AND THE DETERMINANTS OF SUBSTRATE REMARK 0 TITL 3 SPECIFICITY REMARK 0 REF NAT.STRUCT.BIOL. V. 4 1003 1997 REMARK 0 REFN ISSN 1072-8368 REMARK 0 PMID 9406550 REMARK 0 DOI 10.1038/NSB1297-1003 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 15.99 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 350253.690 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 97.9 REMARK 3 NUMBER OF REFLECTIONS : 76159 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.230 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.700 REMARK 3 FREE R VALUE TEST SET COUNT : 7394 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.003 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.55 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 91.20 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 10739 REMARK 3 BIN R VALUE (WORKING SET) : 0.2680 REMARK 3 BIN FREE R VALUE : 0.3000 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 9.60 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 1134 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.011 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 10592 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 21 REMARK 3 SOLVENT ATOMS : 218 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 47.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.40 REMARK 3 ESD FROM SIGMAA (A) : 0.50 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.45 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.56 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.011 REMARK 3 BOND ANGLES (DEGREES) : 1.500 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 21.70 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.920 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.35 REMARK 3 BSOL : 41.97 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : HOHER.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : RS7B.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : HOHER.TOP REMARK 3 TOPOLOGY FILE 3 : ION.TOP REMARK 3 TOPOLOGY FILE 4 : RS7B.TOP REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE AUTHOR CREATED THE R3 DATA FROM THE REMARK 3 ORIGINAL R32 DATA BY EQUATING |FO(KH-L)| TO |FO(HKL)| USING THE REMARK 3 COMPUTER PROGRAM SFTOOLS IN THE CCP4 PACKAGE WITH AN OPTION TO REMARK 3 GENERATE THE SYMMETRY RELATED REFLECTIONS. REMARK 4 REMARK 4 2P0M COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 06-MAR-07. REMARK 100 THE DEPOSITION ID IS D_1000041817. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: AUTHOR USED THE SF DATA FROM ENTRY 1LOX. REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.25 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.44 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 X+2/3,Y+1/3,Z+1/3 REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 7555 X+1/3,Y+2/3,Z+2/3 REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 99.45000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 57.41748 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 45.36667 REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 99.45000 REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 57.41748 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 45.36667 REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 99.45000 REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 57.41748 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 45.36667 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 114.83497 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 90.73333 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 114.83497 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 90.73333 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 114.83497 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 90.73333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3690 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 53240 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -56.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LYS B 171 N - CA - C ANGL. DEV. = -16.7 DEGREES REMARK 500 CYS B 210 CA - CB - SG ANGL. DEV. = 7.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 13 -160.84 -74.29 REMARK 500 PRO A 41 105.12 -44.89 REMARK 500 PHE A 70 -71.11 -78.29 REMARK 500 CYS A 97 -59.69 -129.49 REMARK 500 SER A 156 -42.89 -133.83 REMARK 500 ILE A 194 -35.77 -38.13 REMARK 500 PRO A 197 150.78 -47.83 REMARK 500 PHE A 208 105.51 -53.88 REMARK 500 TRP A 209 28.37 -165.44 REMARK 500 CYS A 210 -77.56 -64.72 REMARK 500 LEU A 234 -62.79 -91.58 REMARK 500 GLU A 259 -30.50 -132.71 REMARK 500 ALA A 299 67.74 -118.97 REMARK 500 HIS A 361 -73.84 -83.22 REMARK 500 VAL A 391 -38.02 -35.83 REMARK 500 TYR A 396 19.44 57.74 REMARK 500 ARG A 405 22.93 -74.88 REMARK 500 VAL A 456 97.36 -67.44 REMARK 500 ILE A 506 -76.28 -79.05 REMARK 500 GLN A 509 72.07 44.70 REMARK 500 THR A 538 -88.13 -130.69 REMARK 500 ALA A 558 75.55 -162.35 REMARK 500 LYS A 570 61.38 -105.99 REMARK 500 ASP A 571 57.56 -142.23 REMARK 500 HIS B 30 -62.64 -93.17 REMARK 500 CYS B 97 -72.74 -132.17 REMARK 500 ASN B 152 -166.72 -122.79 REMARK 500 ARG B 166 -145.06 -125.11 REMARK 500 LEU B 168 -101.45 -73.43 REMARK 500 GLU B 169 -44.08 -171.91 REMARK 500 ASP B 170 32.26 -88.57 REMARK 500 LYS B 172 64.05 -67.95 REMARK 500 PHE B 175 -124.54 -57.10 REMARK 500 GLU B 176 -23.98 -39.39 REMARK 500 LYS B 199 29.01 -150.78 REMARK 500 CYS B 210 55.53 -151.31 REMARK 500 LEU B 241 -35.98 -133.00 REMARK 500 PHE B 279 42.49 -104.08 REMARK 500 ALA B 299 70.36 -115.56 REMARK 500 PRO B 300 -177.35 -66.21 REMARK 500 ASN B 359 -62.06 -92.24 REMARK 500 LEU B 408 -66.16 -107.68 REMARK 500 ILE B 506 -72.83 -86.53 REMARK 500 THR B 538 -82.53 -119.70 REMARK 500 ALA B 558 67.28 -168.30 REMARK 500 ARG B 599 -17.39 -144.04 REMARK 500 ASP B 600 77.11 64.56 REMARK 500 ILE B 603 55.98 -90.35 REMARK 500 LYS B 644 69.77 -113.64 REMARK 500 PRO B 654 -25.74 -39.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE2 A 840 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 361 NE2 REMARK 620 2 HIS A 366 NE2 83.5 REMARK 620 3 HIS A 541 NE2 97.3 71.1 REMARK 620 4 HIS A 545 ND1 86.2 167.0 102.4 REMARK 620 5 ILE A 663 OXT 167.8 104.9 93.8 86.6 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE2 B 840 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 361 NE2 REMARK 620 2 HIS B 366 NE2 95.8 REMARK 620 3 HIS B 541 NE2 94.5 102.7 REMARK 620 4 HIS B 545 ND1 75.9 171.6 76.7 REMARK 620 5 ILE B 663 OXT 156.3 107.1 86.3 81.3 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FE2 A 840 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FE2 B 840 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE RS7 B 841 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1LOX RELATED DB: PDB REMARK 900 THIS ENTRY 2P0M REFLECTS AN ALTERNATIVE MODELING OF X-RAY DATA REMARK 900 R1LOXSF. DBREF 2P0M A 2 663 UNP P12530 LOX15_RABIT 2 663 DBREF 2P0M B 2 663 UNP P12530 LOX15_RABIT 2 663 SEQRES 1 A 662 GLY VAL TYR ARG VAL CYS VAL SER THR GLY ALA SER ILE SEQRES 2 A 662 TYR ALA GLY SER LYS ASN LYS VAL GLU LEU TRP LEU VAL SEQRES 3 A 662 GLY GLN HIS GLY GLU VAL GLU LEU GLY SER CYS LEU ARG SEQRES 4 A 662 PRO THR ARG ASN LYS GLU GLU GLU PHE LYS VAL ASN VAL SEQRES 5 A 662 SER LYS TYR LEU GLY SER LEU LEU PHE VAL ARG LEU ARG SEQRES 6 A 662 LYS LYS HIS PHE LEU LYS GLU ASP ALA TRP PHE CYS ASN SEQRES 7 A 662 TRP ILE SER VAL GLN ALA LEU GLY ALA ALA GLU ASP LYS SEQRES 8 A 662 TYR TRP PHE PRO CYS TYR ARG TRP VAL VAL GLY ASP GLY SEQRES 9 A 662 VAL GLN SER LEU PRO VAL GLY THR GLY CYS THR THR VAL SEQRES 10 A 662 GLY ASP PRO GLN GLY LEU PHE GLN LYS HIS ARG GLU GLN SEQRES 11 A 662 GLU LEU GLU GLU ARG ARG LYS LEU TYR GLN TRP GLY SER SEQRES 12 A 662 TRP LYS GLU GLY LEU ILE LEU ASN VAL ALA GLY SER LYS SEQRES 13 A 662 LEU THR ASP LEU PRO VAL ASP GLU ARG PHE LEU GLU ASP SEQRES 14 A 662 LYS LYS ILE ASP PHE GLU ALA SER LEU ALA TRP GLY LEU SEQRES 15 A 662 ALA GLU LEU ALA LEU LYS ASN SER LEU ASN ILE LEU ALA SEQRES 16 A 662 PRO TRP LYS THR LEU ASP ASP PHE ASN ARG ILE PHE TRP SEQRES 17 A 662 CYS GLY ARG SER LYS LEU ALA ARG ARG VAL ARG ASP SER SEQRES 18 A 662 TRP GLN GLU ASP SER LEU PHE GLY TYR GLN PHE LEU ASN SEQRES 19 A 662 GLY ALA ASN PRO MET LEU LEU ARG ARG SER VAL GLN LEU SEQRES 20 A 662 PRO ALA ARG LEU VAL PHE PRO PRO GLY MET GLU GLU LEU SEQRES 21 A 662 GLN ALA GLN LEU GLU LYS GLU LEU LYS ALA GLY THR LEU SEQRES 22 A 662 PHE GLU ALA ASP PHE ALA LEU LEU ASP ASN ILE LYS ALA SEQRES 23 A 662 ASN VAL ILE LEU TYR CYS GLN GLN TYR LEU ALA ALA PRO SEQRES 24 A 662 LEU VAL MET LEU LYS LEU GLN PRO ASP GLY LYS LEU MET SEQRES 25 A 662 PRO MET VAL ILE GLN LEU HIS LEU PRO LYS ILE GLY SER SEQRES 26 A 662 SER PRO PRO PRO LEU PHE LEU PRO THR ASP PRO PRO MET SEQRES 27 A 662 VAL TRP LEU LEU ALA LYS CYS TRP VAL ARG SER SER ASP SEQRES 28 A 662 PHE GLN VAL HIS GLU LEU ASN SER HIS LEU LEU ARG GLY SEQRES 29 A 662 HIS LEU MET ALA GLU VAL PHE THR VAL ALA THR MET ARG SEQRES 30 A 662 CYS LEU PRO SER ILE HIS PRO VAL PHE LYS LEU ILE VAL SEQRES 31 A 662 PRO HIS LEU ARG TYR THR LEU GLU ILE ASN VAL ARG ALA SEQRES 32 A 662 ARG ASN GLY LEU VAL SER ASP PHE GLY ILE PHE ASP GLN SEQRES 33 A 662 ILE MET SER THR GLY GLY GLY GLY HIS VAL GLN LEU LEU SEQRES 34 A 662 GLN GLN ALA GLY ALA PHE LEU THR TYR ARG SER PHE CYS SEQRES 35 A 662 PRO PRO ASP ASP LEU ALA ASP ARG GLY LEU LEU GLY VAL SEQRES 36 A 662 GLU SER SER PHE TYR ALA GLN ASP ALA LEU ARG LEU TRP SEQRES 37 A 662 GLU ILE ILE SER ARG TYR VAL GLN GLY ILE MET GLY LEU SEQRES 38 A 662 TYR TYR LYS THR ASP GLU ALA VAL ARG ASP ASP LEU GLU SEQRES 39 A 662 LEU GLN SER TRP CYS ARG GLU ILE THR GLU ILE GLY LEU SEQRES 40 A 662 GLN GLY ALA GLN LYS GLN GLY PHE PRO THR SER LEU GLN SEQRES 41 A 662 SER VAL ALA GLN ALA CYS HIS PHE VAL THR MET CYS ILE SEQRES 42 A 662 PHE THR CYS THR GLY GLN HIS SER SER ILE HIS LEU GLY SEQRES 43 A 662 GLN LEU ASP TRP PHE THR TRP VAL PRO ASN ALA PRO CYS SEQRES 44 A 662 THR MET ARG LEU PRO PRO PRO THR THR LYS ASP ALA THR SEQRES 45 A 662 LEU GLU THR VAL MET ALA THR LEU PRO ASN LEU HIS GLN SEQRES 46 A 662 SER SER LEU GLN MET SER ILE VAL TRP GLN LEU GLY ARG SEQRES 47 A 662 ASP GLN PRO ILE MET VAL PRO LEU GLY GLN HIS GLN GLU SEQRES 48 A 662 GLU TYR PHE SER GLY PRO GLU PRO ARG ALA VAL LEU GLU SEQRES 49 A 662 LYS PHE ARG GLU GLU LEU ALA ILE MET ASP LYS GLU ILE SEQRES 50 A 662 GLU VAL ARG ASN GLU LYS LEU ASP ILE PRO TYR GLU TYR SEQRES 51 A 662 LEU ARG PRO SER ILE VAL GLU ASN SER VAL ALA ILE SEQRES 1 B 662 GLY VAL TYR ARG VAL CYS VAL SER THR GLY ALA SER ILE SEQRES 2 B 662 TYR ALA GLY SER LYS ASN LYS VAL GLU LEU TRP LEU VAL SEQRES 3 B 662 GLY GLN HIS GLY GLU VAL GLU LEU GLY SER CYS LEU ARG SEQRES 4 B 662 PRO THR ARG ASN LYS GLU GLU GLU PHE LYS VAL ASN VAL SEQRES 5 B 662 SER LYS TYR LEU GLY SER LEU LEU PHE VAL ARG LEU ARG SEQRES 6 B 662 LYS LYS HIS PHE LEU LYS GLU ASP ALA TRP PHE CYS ASN SEQRES 7 B 662 TRP ILE SER VAL GLN ALA LEU GLY ALA ALA GLU ASP LYS SEQRES 8 B 662 TYR TRP PHE PRO CYS TYR ARG TRP VAL VAL GLY ASP GLY SEQRES 9 B 662 VAL GLN SER LEU PRO VAL GLY THR GLY CYS THR THR VAL SEQRES 10 B 662 GLY ASP PRO GLN GLY LEU PHE GLN LYS HIS ARG GLU GLN SEQRES 11 B 662 GLU LEU GLU GLU ARG ARG LYS LEU TYR GLN TRP GLY SER SEQRES 12 B 662 TRP LYS GLU GLY LEU ILE LEU ASN VAL ALA GLY SER LYS SEQRES 13 B 662 LEU THR ASP LEU PRO VAL ASP GLU ARG PHE LEU GLU ASP SEQRES 14 B 662 LYS LYS ILE ASP PHE GLU ALA SER LEU ALA TRP GLY LEU SEQRES 15 B 662 ALA GLU LEU ALA LEU LYS ASN SER LEU ASN ILE LEU ALA SEQRES 16 B 662 PRO TRP LYS THR LEU ASP ASP PHE ASN ARG ILE PHE TRP SEQRES 17 B 662 CYS GLY ARG SER LYS LEU ALA ARG ARG VAL ARG ASP SER SEQRES 18 B 662 TRP GLN GLU ASP SER LEU PHE GLY TYR GLN PHE LEU ASN SEQRES 19 B 662 GLY ALA ASN PRO MET LEU LEU ARG ARG SER VAL GLN LEU SEQRES 20 B 662 PRO ALA ARG LEU VAL PHE PRO PRO GLY MET GLU GLU LEU SEQRES 21 B 662 GLN ALA GLN LEU GLU LYS GLU LEU LYS ALA GLY THR LEU SEQRES 22 B 662 PHE GLU ALA ASP PHE ALA LEU LEU ASP ASN ILE LYS ALA SEQRES 23 B 662 ASN VAL ILE LEU TYR CYS GLN GLN TYR LEU ALA ALA PRO SEQRES 24 B 662 LEU VAL MET LEU LYS LEU GLN PRO ASP GLY LYS LEU MET SEQRES 25 B 662 PRO MET VAL ILE GLN LEU HIS LEU PRO LYS ILE GLY SER SEQRES 26 B 662 SER PRO PRO PRO LEU PHE LEU PRO THR ASP PRO PRO MET SEQRES 27 B 662 VAL TRP LEU LEU ALA LYS CYS TRP VAL ARG SER SER ASP SEQRES 28 B 662 PHE GLN VAL HIS GLU LEU ASN SER HIS LEU LEU ARG GLY SEQRES 29 B 662 HIS LEU MET ALA GLU VAL PHE THR VAL ALA THR MET ARG SEQRES 30 B 662 CYS LEU PRO SER ILE HIS PRO VAL PHE LYS LEU ILE VAL SEQRES 31 B 662 PRO HIS LEU ARG TYR THR LEU GLU ILE ASN VAL ARG ALA SEQRES 32 B 662 ARG ASN GLY LEU VAL SER ASP PHE GLY ILE PHE ASP GLN SEQRES 33 B 662 ILE MET SER THR GLY GLY GLY GLY HIS VAL GLN LEU LEU SEQRES 34 B 662 GLN GLN ALA GLY ALA PHE LEU THR TYR ARG SER PHE CYS SEQRES 35 B 662 PRO PRO ASP ASP LEU ALA ASP ARG GLY LEU LEU GLY VAL SEQRES 36 B 662 GLU SER SER PHE TYR ALA GLN ASP ALA LEU ARG LEU TRP SEQRES 37 B 662 GLU ILE ILE SER ARG TYR VAL GLN GLY ILE MET GLY LEU SEQRES 38 B 662 TYR TYR LYS THR ASP GLU ALA VAL ARG ASP ASP LEU GLU SEQRES 39 B 662 LEU GLN SER TRP CYS ARG GLU ILE THR GLU ILE GLY LEU SEQRES 40 B 662 GLN GLY ALA GLN LYS GLN GLY PHE PRO THR SER LEU GLN SEQRES 41 B 662 SER VAL ALA GLN ALA CYS HIS PHE VAL THR MET CYS ILE SEQRES 42 B 662 PHE THR CYS THR GLY GLN HIS SER SER ILE HIS LEU GLY SEQRES 43 B 662 GLN LEU ASP TRP PHE THR TRP VAL PRO ASN ALA PRO CYS SEQRES 44 B 662 THR MET ARG LEU PRO PRO PRO THR THR LYS ASP ALA THR SEQRES 45 B 662 LEU GLU THR VAL MET ALA THR LEU PRO ASN LEU HIS GLN SEQRES 46 B 662 SER SER LEU GLN MET SER ILE VAL TRP GLN LEU GLY ARG SEQRES 47 B 662 ASP GLN PRO ILE MET VAL PRO LEU GLY GLN HIS GLN GLU SEQRES 48 B 662 GLU TYR PHE SER GLY PRO GLU PRO ARG ALA VAL LEU GLU SEQRES 49 B 662 LYS PHE ARG GLU GLU LEU ALA ILE MET ASP LYS GLU ILE SEQRES 50 B 662 GLU VAL ARG ASN GLU LYS LEU ASP ILE PRO TYR GLU TYR SEQRES 51 B 662 LEU ARG PRO SER ILE VAL GLU ASN SER VAL ALA ILE HET FE2 A 840 1 HET FE2 B 840 1 HET RS7 B 841 19 HETNAM FE2 FE (II) ION HETNAM RS7 (2E)-3-(2-OCT-1-YN-1-YLPHENYL)ACRYLIC ACID FORMUL 3 FE2 2(FE 2+) FORMUL 5 RS7 C17 H20 O2 FORMUL 6 HOH *218(H2 O) HELIX 1 1 PHE A 125 TYR A 140 1 16 HELIX 2 2 LYS A 157 LEU A 161 5 5 HELIX 3 3 PRO A 162 ARG A 166 5 5 HELIX 4 4 LEU A 168 LEU A 192 1 25 HELIX 5 5 ASN A 193 ALA A 196 5 4 HELIX 6 6 THR A 200 ASP A 202 5 3 HELIX 7 7 ASP A 203 PHE A 208 1 6 HELIX 8 8 SER A 213 SER A 222 1 10 HELIX 9 9 GLU A 225 GLY A 236 1 12 HELIX 10 10 GLU A 259 GLY A 272 1 14 HELIX 11 11 ALA A 280 ASP A 283 5 4 HELIX 12 12 PRO A 337 ASN A 359 1 23 HELIX 13 13 GLY A 365 LEU A 380 1 16 HELIX 14 14 HIS A 384 VAL A 391 1 8 HELIX 15 15 PRO A 392 ARG A 395 5 4 HELIX 16 16 TYR A 396 ARG A 405 1 10 HELIX 17 17 GLY A 413 MET A 419 1 7 HELIX 18 18 GLY A 424 GLN A 432 1 9 HELIX 19 19 ALA A 433 ALA A 435 5 3 HELIX 20 20 THR A 438 PHE A 442 5 5 HELIX 21 21 CYS A 443 GLY A 452 1 10 HELIX 22 22 SER A 459 TYR A 484 1 26 HELIX 23 23 THR A 486 ASP A 492 1 7 HELIX 24 24 ASP A 493 GLU A 505 1 13 HELIX 25 25 SER A 522 CYS A 537 1 16 HELIX 26 26 THR A 538 LEU A 546 1 9 HELIX 27 27 GLY A 547 PHE A 552 1 6 HELIX 28 28 TRP A 554 ALA A 558 5 5 HELIX 29 29 THR A 573 LEU A 581 1 9 HELIX 30 30 ASN A 583 GLY A 598 1 16 HELIX 31 31 GLY A 617 LEU A 645 1 29 HELIX 32 32 PHE B 125 TYR B 140 1 16 HELIX 33 33 LYS B 157 LEU B 161 5 5 HELIX 34 34 PHE B 175 ASN B 193 1 19 HELIX 35 35 THR B 200 PHE B 208 5 9 HELIX 36 36 SER B 213 TRP B 223 1 11 HELIX 37 37 GLU B 225 GLY B 236 1 12 HELIX 38 38 MET B 258 GLY B 272 1 15 HELIX 39 39 ALA B 280 ASP B 283 5 4 HELIX 40 40 PRO B 337 ASN B 359 1 23 HELIX 41 41 GLY B 365 LEU B 380 1 16 HELIX 42 42 HIS B 384 VAL B 391 1 8 HELIX 43 43 PRO B 392 ARG B 395 5 4 HELIX 44 44 TYR B 396 ARG B 405 1 10 HELIX 45 45 ILE B 414 MET B 419 1 6 HELIX 46 46 GLY B 424 ALA B 433 1 10 HELIX 47 47 THR B 438 PHE B 442 5 5 HELIX 48 48 CYS B 443 ARG B 451 1 9 HELIX 49 49 SER B 459 GLY B 481 1 23 HELIX 50 50 GLU B 488 ASP B 493 1 6 HELIX 51 51 ASP B 493 GLU B 505 1 13 HELIX 52 52 SER B 522 THR B 538 1 17 HELIX 53 53 THR B 538 LEU B 546 1 9 HELIX 54 54 GLY B 547 THR B 553 1 7 HELIX 55 55 TRP B 554 ALA B 558 5 5 HELIX 56 56 THR B 573 LEU B 581 1 9 HELIX 57 57 ASN B 583 GLN B 596 1 14 HELIX 58 58 GLY B 617 LYS B 644 1 28 SHEET 1 A 4 GLU A 46 ASN A 52 0 SHEET 2 A 4 VAL A 3 THR A 10 -1 N TYR A 4 O VAL A 51 SHEET 3 A 4 TRP A 76 ALA A 85 -1 O ASN A 79 N SER A 9 SHEET 4 A 4 TYR A 93 VAL A 101 -1 O VAL A 101 N TRP A 76 SHEET 1 B 4 GLU A 32 LEU A 39 0 SHEET 2 B 4 LYS A 21 GLY A 28 -1 N VAL A 22 O LEU A 39 SHEET 3 B 4 LEU A 60 LYS A 68 -1 O ARG A 66 N GLU A 23 SHEET 4 B 4 GLN A 107 PRO A 110 -1 O GLN A 107 N LEU A 65 SHEET 1 C 2 TRP A 142 GLY A 143 0 SHEET 2 C 2 ASN A 152 VAL A 153 -1 O ASN A 152 N GLY A 143 SHEET 1 D 4 ARG A 243 ARG A 244 0 SHEET 2 D 4 LEU A 274 ASP A 278 -1 O GLU A 276 N ARG A 243 SHEET 3 D 4 LEU A 301 GLN A 307 -1 O LEU A 304 N PHE A 275 SHEET 4 D 4 LYS A 311 GLN A 318 -1 O LYS A 311 N GLN A 307 SHEET 1 E 2 VAL A 289 ILE A 290 0 SHEET 2 E 2 CYS A 293 GLN A 294 -1 O CYS A 293 N ILE A 290 SHEET 1 F 4 GLU B 46 ASN B 52 0 SHEET 2 F 4 VAL B 3 THR B 10 -1 N TYR B 4 O VAL B 51 SHEET 3 F 4 TRP B 76 ALA B 85 -1 O SER B 82 N CYS B 7 SHEET 4 F 4 TYR B 93 VAL B 101 -1 O VAL B 101 N TRP B 76 SHEET 1 G 4 GLU B 32 LEU B 39 0 SHEET 2 G 4 VAL B 22 GLY B 28 -1 N VAL B 22 O CYS B 38 SHEET 3 G 4 LEU B 60 ARG B 66 -1 O ARG B 66 N GLU B 23 SHEET 4 G 4 GLN B 107 PRO B 110 -1 O LEU B 109 N VAL B 63 SHEET 1 H 2 TRP B 142 GLY B 143 0 SHEET 2 H 2 ASN B 152 VAL B 153 -1 O ASN B 152 N GLY B 143 SHEET 1 I 4 ARG B 243 ARG B 244 0 SHEET 2 I 4 LEU B 274 ASP B 278 -1 O GLU B 276 N ARG B 243 SHEET 3 I 4 LEU B 301 LEU B 306 -1 O LEU B 304 N PHE B 275 SHEET 4 I 4 LEU B 312 GLN B 318 -1 O MET B 315 N MET B 303 SHEET 1 J 2 VAL B 289 ILE B 290 0 SHEET 2 J 2 CYS B 293 GLN B 294 -1 O CYS B 293 N ILE B 290 LINK NE2 HIS A 361 FE FE2 A 840 1555 1555 2.20 LINK NE2 HIS A 366 FE FE2 A 840 1555 1555 2.42 LINK NE2 HIS A 541 FE FE2 A 840 1555 1555 2.36 LINK ND1 HIS A 545 FE FE2 A 840 1555 1555 2.29 LINK OXT ILE A 663 FE FE2 A 840 1555 1555 2.16 LINK NE2 HIS B 361 FE FE2 B 840 1555 1555 2.58 LINK NE2 HIS B 366 FE FE2 B 840 1555 1555 2.06 LINK NE2 HIS B 541 FE FE2 B 840 1555 1555 2.32 LINK ND1 HIS B 545 FE FE2 B 840 1555 1555 2.57 LINK OXT ILE B 663 FE FE2 B 840 1555 1555 2.01 SITE 1 AC1 5 HIS A 361 HIS A 366 HIS A 541 HIS A 545 SITE 2 AC1 5 ILE A 663 SITE 1 AC2 5 HIS B 361 HIS B 366 HIS B 541 HIS B 545 SITE 2 AC2 5 ILE B 663 SITE 1 AC3 8 GLU B 357 LEU B 362 HIS B 366 ILE B 400 SITE 2 AC3 8 ALA B 404 PHE B 415 ILE B 593 LEU B 597 CRYST1 198.900 198.900 136.100 90.00 90.00 120.00 H 3 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005028 0.002903 0.000000 0.00000 SCALE2 0.000000 0.005805 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007348 0.00000