HEADER CELL ADHESION 07-MAR-07 2P28 TITLE STRUCTURE OF THE PHE2 AND PHE3 FRAGMENTS OF THE INTEGRIN BETA2 SUBUNIT CAVEAT 2P28 NAG A 401 HAS WRONG CHIRALITY AT ATOM C1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: INTEGRIN BETA-2; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: PHE2 FRAGMENT; COMPND 5 SYNONYM: CELL SURFACE ADHESION GLYCOPROTEINS LFA- 1/CR3/P150,95 COMPND 6 SUBUNIT BETA, COMPLEMENT RECEPTOR C3 SUBUNIT BETA, CD18 ANTIGEN; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: INTEGRIN BETA-2; COMPND 10 CHAIN: B; COMPND 11 FRAGMENT: PHE3 FRAGMENT; COMPND 12 SYNONYM: CELL SURFACE ADHESION GLYCOPROTEINS LFA- 1/CR3/P150,95 COMPND 13 SUBUNIT BETA, COMPLEMENT RECEPTOR C3 SUBUNIT BETA, CD18 ANTIGEN; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 6 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: HEK293_GNTI; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PIRES2-EGFP; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_COMMON: HUMAN; SOURCE 14 ORGANISM_TAXID: 9606; SOURCE 15 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 16 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 18 EXPRESSION_SYSTEM_CELL_LINE: HEK293_GNTI; SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PIRES2-EGFP KEYWDS INTEGRIN BETA2 SUBUNIT, HYBRID DOMAIN, PSI DOMAIN, I-EGF DOMAINS, KEYWDS 2 CELL ADHESION EXPDTA X-RAY DIFFRACTION AUTHOR M.SHI,S.Y.FOO,S.M.TAN,E.P.MITCHELL,S.K.A.LAW,J.LESCAR REVDAT 7 30-OCT-24 2P28 1 REMARK REVDAT 6 25-OCT-23 2P28 1 HETSYN REVDAT 5 29-JUL-20 2P28 1 CAVEAT COMPND REMARK SEQADV REVDAT 5 2 1 HETNAM SITE REVDAT 4 13-JUL-11 2P28 1 VERSN REVDAT 3 24-FEB-09 2P28 1 VERSN REVDAT 2 17-JUN-08 2P28 1 JRNL REVDAT 1 14-AUG-07 2P28 0 JRNL AUTH M.SHI,S.Y.FOO,S.M.TAN,E.P.MITCHELL,S.K.A.LAW,J.LESCAR JRNL TITL A STRUCTURAL HYPOTHESIS FOR THE TRANSITION BETWEEN BENT AND JRNL TITL 2 EXTENDED CONFORMATIONS OF THE LEUKOCYTE BETA2 INTEGRINS JRNL REF J.BIOL.CHEM. V. 282 30198 2007 JRNL REFN ISSN 0021-9258 JRNL PMID 17673459 JRNL DOI 10.1074/JBC.M701670200 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.24 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 18723 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.263 REMARK 3 R VALUE (WORKING SET) : 0.261 REMARK 3 FREE R VALUE : 0.308 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 964 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.26 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1255 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.3020 REMARK 3 BIN FREE R VALUE SET COUNT : 70 REMARK 3 BIN FREE R VALUE : 0.4050 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2355 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 15 REMARK 3 SOLVENT ATOMS : 199 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : UNVERIFIED REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.65 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.16000 REMARK 3 B22 (A**2) : 0.16000 REMARK 3 B33 (A**2) : -0.24000 REMARK 3 B12 (A**2) : 0.08000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.341 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.262 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.196 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.734 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.912 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.900 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2408 ; 0.009 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 2053 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3257 ; 1.223 ; 1.963 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4816 ; 0.800 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 305 ; 6.312 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 355 ; 0.071 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2710 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 466 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 442 ; 0.174 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 2404 ; 0.221 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): 1536 ; 0.081 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 142 ; 0.174 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 28 ; 0.185 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 100 ; 0.231 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 19 ; 0.158 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1532 ; 0.716 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2453 ; 1.337 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 876 ; 1.332 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 804 ; 2.281 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 B 431 REMARK 3 ORIGIN FOR THE GROUP (A): -13.5719 19.7650 9.1114 REMARK 3 T TENSOR REMARK 3 T11: 0.5006 T22: 0.4081 REMARK 3 T33: 0.4655 T12: 0.0153 REMARK 3 T13: -0.0505 T23: -0.0609 REMARK 3 L TENSOR REMARK 3 L11: 1.1953 L22: 0.6294 REMARK 3 L33: 2.0810 L12: -0.3745 REMARK 3 L13: -0.5242 L23: 0.9519 REMARK 3 S TENSOR REMARK 3 S11: 0.0357 S12: 0.1246 S13: -0.0428 REMARK 3 S21: 0.1741 S22: 0.0322 S23: -0.0664 REMARK 3 S31: 0.3092 S32: -0.1245 S33: -0.0679 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 435 B 466 REMARK 3 ORIGIN FOR THE GROUP (A): -21.9354 23.4167 42.1519 REMARK 3 T TENSOR REMARK 3 T11: 0.7003 T22: 0.2709 REMARK 3 T33: 0.3286 T12: -0.3067 REMARK 3 T13: 0.0132 T23: -0.2175 REMARK 3 L TENSOR REMARK 3 L11: 13.9432 L22: 6.7843 REMARK 3 L33: 28.2786 L12: -6.6546 REMARK 3 L13: -12.2910 L23: 11.4915 REMARK 3 S TENSOR REMARK 3 S11: 0.2904 S12: -0.1926 S13: 0.7016 REMARK 3 S21: -0.1336 S22: -0.8847 S23: 0.3085 REMARK 3 S31: 1.7915 S32: -0.7804 S33: 0.5943 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 470 B 556 REMARK 3 ORIGIN FOR THE GROUP (A): -18.1695 44.7480 69.1864 REMARK 3 T TENSOR REMARK 3 T11: 0.4187 T22: 0.4547 REMARK 3 T33: 0.5230 T12: -0.0847 REMARK 3 T13: 0.0100 T23: -0.0696 REMARK 3 L TENSOR REMARK 3 L11: 1.7190 L22: 0.5953 REMARK 3 L33: 3.9696 L12: 0.7188 REMARK 3 L13: -1.6289 L23: 0.3703 REMARK 3 S TENSOR REMARK 3 S11: 0.2513 S12: -0.0634 S13: 0.0195 REMARK 3 S21: 0.0830 S22: -0.1227 S23: -0.0328 REMARK 3 S31: -0.2204 S32: 0.2268 S33: -0.1286 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2P28 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 13-MAR-07. REMARK 100 THE DEPOSITION ID IS D_1000041874. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-SEP-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.976 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18866 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.26 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE, PHASES REMARK 200 STARTING MODEL: 1YUK, 1L3Y REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.58 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.39 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M AMMONIUM SULPHATE, 15% PEG4000, REMARK 280 5% ISOPROPANOL, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 282.61600 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 141.30800 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 211.96200 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 70.65400 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 353.27000 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 282.61600 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 141.30800 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 70.65400 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 211.96200 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 353.27000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4430 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18450 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -22.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A 69 REMARK 465 ASN A 70 REMARK 465 GLY A 71 REMARK 465 GLY A 72 REMARK 465 ASP B 433 REMARK 465 ARG B 434 REMARK 465 SER B 467 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG B 466 CG CD NE CZ NH1 NH2 REMARK 470 SER B 468 OG REMARK 470 GLN B 469 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 557 O HOH B 594 8665 1.84 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 68 CB - CG - OD2 ANGL. DEV. = 6.0 DEGREES REMARK 500 ASP B 377 CB - CG - OD2 ANGL. DEV. = 6.0 DEGREES REMARK 500 ASP B 515 CB - CG - OD2 ANGL. DEV. = 5.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 2 115.44 -176.51 REMARK 500 PHE A 6 -79.35 -75.85 REMARK 500 ASP A 58 74.33 -159.06 REMARK 500 LYS A 74 -76.22 -84.66 REMARK 500 GLU B 444 110.39 -169.10 REMARK 500 GLN B 464 -153.10 -106.24 REMARK 500 ASN B 480 46.12 -108.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 SER B 431 ARG B 432 -134.39 REMARK 500 SER B 435 LEU B 436 -58.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2P26 RELATED DB: PDB DBREF 2P28 A 1 100 UNP P05107 ITB2_HUMAN 23 122 DBREF 2P28 B 340 552 UNP P05107 ITB2_HUMAN 362 574 SEQADV 2P28 HIS B 553 UNP P05107 EXPRESSION TAG SEQADV 2P28 HIS B 554 UNP P05107 EXPRESSION TAG SEQADV 2P28 HIS B 555 UNP P05107 EXPRESSION TAG SEQADV 2P28 HIS B 556 UNP P05107 EXPRESSION TAG SEQRES 1 A 100 GLN GLU CYS THR LYS PHE LYS VAL SER SER CYS ARG GLU SEQRES 2 A 100 CYS ILE GLU SER GLY PRO GLY CYS THR TRP CYS GLN LYS SEQRES 3 A 100 LEU ASN PHE THR GLY PRO GLY ASP PRO ASP SER ILE ARG SEQRES 4 A 100 CYS ASP THR ARG PRO GLN LEU LEU MET ARG GLY CYS ALA SEQRES 5 A 100 ALA ASP ASP ILE MET ASP PRO THR SER LEU ALA GLU THR SEQRES 6 A 100 GLN GLU ASP HIS ASN GLY GLY GLN LYS GLN LEU SER PRO SEQRES 7 A 100 GLN LYS VAL THR LEU TYR LEU ARG PRO GLY GLN ALA ALA SEQRES 8 A 100 ALA PHE ASN VAL THR PHE ARG ARG ALA SEQRES 1 B 217 LYS LEU SER SER ARG VAL PHE LEU ASP HIS ASN ALA LEU SEQRES 2 B 217 PRO ASP THR LEU LYS VAL THR TYR ASP SER PHE CYS SER SEQRES 3 B 217 ASN GLY VAL THR HIS ARG ASN GLN PRO ARG GLY ASP CYS SEQRES 4 B 217 ASP GLY VAL GLN ILE ASN VAL PRO ILE THR PHE GLN VAL SEQRES 5 B 217 LYS VAL THR ALA THR GLU CYS ILE GLN GLU GLN SER PHE SEQRES 6 B 217 VAL ILE ARG ALA LEU GLY PHE THR ASP ILE VAL THR VAL SEQRES 7 B 217 GLN VAL LEU PRO GLN CYS GLU CYS ARG CYS ARG ASP GLN SEQRES 8 B 217 SER ARG ASP ARG SER LEU CYS HIS GLY LYS GLY PHE LEU SEQRES 9 B 217 GLU CYS GLY ILE CYS ARG CYS ASP THR GLY TYR ILE GLY SEQRES 10 B 217 LYS ASN CYS GLU CYS GLN THR GLN GLY ARG SER SER GLN SEQRES 11 B 217 GLU LEU GLU GLY SER CYS ARG LYS ASP ASN ASN SER ILE SEQRES 12 B 217 ILE CYS SER GLY LEU GLY ASP CYS VAL CYS GLY GLN CYS SEQRES 13 B 217 LEU CYS HIS THR SER ASP VAL PRO GLY LYS LEU ILE TYR SEQRES 14 B 217 GLY GLN TYR CYS GLU CYS ASP THR ILE ASN CYS GLU ARG SEQRES 15 B 217 TYR ASN GLY GLN VAL CYS GLY GLY PRO GLY ARG GLY LEU SEQRES 16 B 217 CYS PHE CYS GLY LYS CYS ARG CYS HIS PRO GLY PHE GLU SEQRES 17 B 217 GLY SER ALA CYS GLN HIS HIS HIS HIS HET NAG A 401 15 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 3 NAG C8 H15 N O6 FORMUL 4 HOH *199(H2 O) HELIX 1 1 SER A 10 GLY A 18 1 9 HELIX 2 2 LYS A 26 THR A 30 5 5 HELIX 3 3 PRO A 35 ILE A 38 5 4 HELIX 4 4 THR A 42 MET A 48 1 7 HELIX 5 5 ALA A 52 ASP A 54 5 3 HELIX 6 6 SER B 468 ARG B 476 5 9 HELIX 7 7 ILE B 482 GLY B 486 5 5 SHEET 1 A 3 CYS A 40 ASP A 41 0 SHEET 2 A 3 THR A 22 CYS A 24 -1 N THR A 22 O ASP A 41 SHEET 3 A 3 ILE A 56 MET A 57 -1 O MET A 57 N TRP A 23 SHEET 1 B 6 LEU A 62 GLU A 67 0 SHEET 2 B 6 LYS A 80 LEU A 85 -1 O THR A 82 N GLU A 64 SHEET 3 B 6 ILE B 414 PRO B 421 1 O GLN B 418 N LEU A 83 SHEET 4 B 6 GLN B 402 ALA B 408 -1 N GLN B 402 O VAL B 419 SHEET 5 B 6 VAL B 345 HIS B 349 -1 N ASP B 348 O ARG B 407 SHEET 6 B 6 GLY B 376 CYS B 378 -1 O CYS B 378 N VAL B 345 SHEET 1 C 5 LEU A 76 SER A 77 0 SHEET 2 C 5 ALA A 91 PHE A 97 -1 O THR A 96 N SER A 77 SHEET 3 C 5 ILE B 387 ALA B 395 -1 O VAL B 393 N ALA A 91 SHEET 4 C 5 LEU B 356 PHE B 363 -1 N PHE B 363 O THR B 388 SHEET 5 C 5 THR B 369 GLN B 373 -1 O GLN B 373 N TYR B 360 SHEET 1 D 2 GLY B 441 GLU B 444 0 SHEET 2 D 2 ILE B 447 CYS B 450 -1 O ARG B 449 N PHE B 442 SHEET 1 E 2 TYR B 454 ILE B 455 0 SHEET 2 E 2 CYS B 461 GLN B 462 -1 O CYS B 461 N ILE B 455 SHEET 1 F 2 GLY B 488 VAL B 491 0 SHEET 2 F 2 GLN B 494 CYS B 497 -1 O GLN B 494 N VAL B 491 SHEET 1 G 2 ILE B 507 TYR B 508 0 SHEET 2 G 2 CYS B 514 ASP B 515 -1 O CYS B 514 N TYR B 508 SHEET 1 H 2 ARG B 521 TYR B 522 0 SHEET 2 H 2 GLN B 525 VAL B 526 -1 O GLN B 525 N TYR B 522 SHEET 1 I 2 GLY B 533 PHE B 536 0 SHEET 2 I 2 LYS B 539 CYS B 542 -1 O ARG B 541 N LEU B 534 SHEET 1 J 2 PHE B 546 GLU B 547 0 SHEET 2 J 2 HIS B 553 HIS B 554 -1 O HIS B 553 N GLU B 547 SSBOND 1 CYS A 3 CYS A 21 1555 1555 2.06 SSBOND 2 CYS A 11 CYS B 425 1555 1555 2.03 SSBOND 3 CYS A 14 CYS A 40 1555 1555 2.05 SSBOND 4 CYS A 24 CYS A 51 1555 1555 2.04 SSBOND 5 CYS B 364 CYS B 378 1555 1555 2.02 SSBOND 6 CYS B 398 CYS B 423 1555 1555 2.03 SSBOND 7 CYS B 427 CYS B 445 1555 1555 2.03 SSBOND 8 CYS B 437 CYS B 448 1555 1555 2.04 SSBOND 9 CYS B 450 CYS B 459 1555 1555 2.04 SSBOND 10 CYS B 461 CYS B 492 1555 1555 2.07 SSBOND 11 CYS B 475 CYS B 490 1555 1555 2.06 SSBOND 12 CYS B 484 CYS B 495 1555 1555 2.06 SSBOND 13 CYS B 497 CYS B 512 1555 1555 2.06 SSBOND 14 CYS B 514 CYS B 537 1555 1555 2.07 SSBOND 15 CYS B 519 CYS B 535 1555 1555 2.04 SSBOND 16 CYS B 527 CYS B 540 1555 1555 1.83 SSBOND 17 CYS B 542 CYS B 551 1555 1555 2.03 CISPEP 1 SER A 77 PRO A 78 0 -1.55 CRYST1 52.260 52.260 423.924 90.00 90.00 120.00 P 65 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019135 0.011048 0.000000 0.00000 SCALE2 0.000000 0.022095 0.000000 0.00000 SCALE3 0.000000 0.000000 0.002359 0.00000