HEADER BIOSYNTHETIC PROTEIN 08-MAR-07 2P38 TITLE CRYSTAL STRUCTURE OF PYROCOCCUS ABYSSI PROTEIN HOMOLOGUE OF TITLE 2 SACCHAROMYCES CEREVISIAE NIP7P COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN INVOLVED IN RIBOSOMAL BIOGENESIS; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PYROCOCCUS ABYSSI; SOURCE 3 ORGANISM_TAXID: 29292; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: DH5ALPHA; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PCYTEXP3 KEYWDS TWO ALPHA/BETA DOMAINS, PUA DOMAIN, BIOSYNTHETIC PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR B.G.GUIMARAES,P.P.COLTRI,C.C.OLIVEIRA,N.I.T.ZANCHIN REVDAT 4 21-FEB-24 2P38 1 REMARK REVDAT 3 18-OCT-17 2P38 1 REMARK REVDAT 2 24-FEB-09 2P38 1 VERSN REVDAT 1 15-JAN-08 2P38 0 JRNL AUTH P.P.COLTRI,B.G.GUIMARAES,D.C.GRANATO,J.S.LUZ,E.C.TEIXEIRA, JRNL AUTH 2 C.C.OLIVEIRA,N.I.ZANCHIN JRNL TITL STRUCTURAL INSIGHTS INTO THE INTERACTION OF THE NIP7 PUA JRNL TITL 2 DOMAIN WITH POLYURIDINE RNA JRNL REF BIOCHEMISTRY V. 46 14177 2007 JRNL REFN ISSN 0006-2960 JRNL PMID 18001138 JRNL DOI 10.1021/BI7015876 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.24 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.67 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 31334 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.210 REMARK 3 R VALUE (WORKING SET) : 0.207 REMARK 3 FREE R VALUE : 0.257 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1673 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2330 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.3090 REMARK 3 BIN FREE R VALUE SET COUNT : 118 REMARK 3 BIN FREE R VALUE : 0.3290 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2443 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 248 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.137 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.138 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.092 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.903 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.954 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.931 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2495 ; 0.016 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3386 ; 1.710 ; 1.955 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 308 ; 6.715 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 384 ; 0.111 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1883 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1420 ; 0.235 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 244 ; 0.210 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 62 ; 0.235 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 27 ; 0.224 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1538 ; 1.117 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2467 ; 1.982 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 957 ; 3.083 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 919 ; 5.098 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2P38 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-MAR-07. REMARK 100 THE DEPOSITION ID IS D_1000041909. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-FEB-04 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 7.20 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : LNLS REMARK 200 BEAMLINE : D03B-MX1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.427 REMARK 200 MONOCHROMATOR : SI 111 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33002 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 31.670 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.100 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.04900 REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.00 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.30100 REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.51 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.34 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 4.1 M NACL, 100 MM HEPES, PH 7.2, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K, PH 7.20 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 44.24600 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 45.14200 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 44.24600 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 45.14200 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 44.25740 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 45.34471 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 276 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 177 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 215 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 GLY A 3 REMARK 465 GLU A 4 REMARK 465 VAL A 160 REMARK 465 GLY A 161 REMARK 465 GLU A 162 REMARK 465 PHE A 163 REMARK 465 LEU A 164 REMARK 465 ARG A 165 REMARK 465 ARG A 166 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 GLY B 3 REMARK 465 GLU B 4 REMARK 465 VAL B 160 REMARK 465 GLY B 161 REMARK 465 GLU B 162 REMARK 465 PHE B 163 REMARK 465 LEU B 164 REMARK 465 ARG B 165 REMARK 465 ARG B 166 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 5 CG CD1 CD2 REMARK 470 LYS A 39 CG CD CE NZ REMARK 470 GLU A 55 CG CD OE1 OE2 REMARK 470 GLU A 75 CG CD OE1 OE2 REMARK 470 ASN A 76 CG OD1 ND2 REMARK 470 LYS A 80 CG CD CE NZ REMARK 470 LYS A 123 CG CD CE NZ REMARK 470 LYS A 128 CG CD CE NZ REMARK 470 LYS A 148 CG CD CE NZ REMARK 470 ARG A 151 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 155 CG CD CE NZ REMARK 470 LYS A 158 CG CD CE NZ REMARK 470 ASP A 159 CG OD1 OD2 REMARK 470 LEU B 5 CG CD1 CD2 REMARK 470 ARG B 6 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 39 CG CD CE NZ REMARK 470 ASN B 58 CG OD1 ND2 REMARK 470 GLU B 75 CG CD OE1 OE2 REMARK 470 ASN B 76 CG OD1 ND2 REMARK 470 LYS B 80 CG CD CE NZ REMARK 470 LYS B 123 CG CD CE NZ REMARK 470 LYS B 128 CG CD CE NZ REMARK 470 LYS B 148 CG CD CE NZ REMARK 470 ARG B 151 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 155 CG CD CE NZ REMARK 470 LYS B 158 CG CD CE NZ REMARK 470 ASP B 159 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O GLY A 126 O GLY B 126 4555 1.93 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 74 -169.55 -78.07 REMARK 500 REMARK 500 REMARK: NULL DBREF 2P38 A 1 166 UNP Q9V219 Q9V219_PYRAB 1 166 DBREF 2P38 B 1 166 UNP Q9V219 Q9V219_PYRAB 1 166 SEQRES 1 A 166 MET SER GLY GLU LEU ARG VAL ARG ARG ALA SER SER TRP SEQRES 2 A 166 GLU LEU ASP LEU ILE LEU LYS GLU ALA GLU LYS TYR GLY SEQRES 3 A 166 GLU LEU LEU HIS GLU PHE PHE CYS VAL VAL GLU GLY LYS SEQRES 4 A 166 TYR ARG ASP VAL TYR ALA VAL ASN GLU GLU VAL TRP LYS SEQRES 5 A 166 ILE ILE GLU ASP ILE ASN MET ARG PRO TYR SER LEU GLY SEQRES 6 A 166 THR PHE VAL GLY THR ILE ARG VAL ASP GLU ASN LEU VAL SEQRES 7 A 166 GLU LYS PHE TYR PRO ASN LEU GLU PHE PHE SER LEU ILE SEQRES 8 A 166 LYS LEU GLU LYS ASN TYR VAL ILE LEU GLY PRO LYS ALA SEQRES 9 A 166 SER PHE LEU PHE THR THR GLY LYS ASP ALA PRO LYS GLU SEQRES 10 A 166 ALA VAL ARG GLU ILE LYS TRP GLN GLY SER LYS ARG VAL SEQRES 11 A 166 VAL VAL LEU ASN ASP LEU GLY ASP ILE ILE GLY ILE GLY SEQRES 12 A 166 LEU ILE ASN PRO LYS SER ASP ARG ARG PHE ILE LYS ASN SEQRES 13 A 166 LEU LYS ASP VAL GLY GLU PHE LEU ARG ARG SEQRES 1 B 166 MET SER GLY GLU LEU ARG VAL ARG ARG ALA SER SER TRP SEQRES 2 B 166 GLU LEU ASP LEU ILE LEU LYS GLU ALA GLU LYS TYR GLY SEQRES 3 B 166 GLU LEU LEU HIS GLU PHE PHE CYS VAL VAL GLU GLY LYS SEQRES 4 B 166 TYR ARG ASP VAL TYR ALA VAL ASN GLU GLU VAL TRP LYS SEQRES 5 B 166 ILE ILE GLU ASP ILE ASN MET ARG PRO TYR SER LEU GLY SEQRES 6 B 166 THR PHE VAL GLY THR ILE ARG VAL ASP GLU ASN LEU VAL SEQRES 7 B 166 GLU LYS PHE TYR PRO ASN LEU GLU PHE PHE SER LEU ILE SEQRES 8 B 166 LYS LEU GLU LYS ASN TYR VAL ILE LEU GLY PRO LYS ALA SEQRES 9 B 166 SER PHE LEU PHE THR THR GLY LYS ASP ALA PRO LYS GLU SEQRES 10 B 166 ALA VAL ARG GLU ILE LYS TRP GLN GLY SER LYS ARG VAL SEQRES 11 B 166 VAL VAL LEU ASN ASP LEU GLY ASP ILE ILE GLY ILE GLY SEQRES 12 B 166 LEU ILE ASN PRO LYS SER ASP ARG ARG PHE ILE LYS ASN SEQRES 13 B 166 LEU LYS ASP VAL GLY GLU PHE LEU ARG ARG FORMUL 3 HOH *248(H2 O) HELIX 1 1 SER A 11 LYS A 24 1 14 HELIX 2 2 ASN A 47 ILE A 54 1 8 HELIX 3 3 ARG A 60 LEU A 64 5 5 HELIX 4 4 ASN A 84 SER A 89 1 6 HELIX 5 5 GLY A 101 THR A 110 1 10 HELIX 6 6 PRO A 115 GLU A 117 5 3 HELIX 7 7 SER B 11 LYS B 24 1 14 HELIX 8 8 ASN B 47 ILE B 54 1 8 HELIX 9 9 ARG B 60 GLY B 65 1 6 HELIX 10 10 ASN B 84 SER B 89 1 6 HELIX 11 11 GLY B 101 THR B 110 1 10 HELIX 12 12 PRO B 115 GLU B 117 5 3 SHEET 1 A 5 ARG A 6 ARG A 9 0 SHEET 2 A 5 PHE A 33 GLU A 37 -1 O VAL A 35 N ARG A 8 SHEET 3 A 5 ARG A 41 ALA A 45 -1 O TYR A 44 N CYS A 34 SHEET 4 A 5 THR A 66 VAL A 73 -1 O GLY A 69 N VAL A 43 SHEET 5 A 5 GLU A 79 PRO A 83 -1 O TYR A 82 N THR A 70 SHEET 1 B 2 GLY A 26 LEU A 28 0 SHEET 2 B 2 ILE A 91 LEU A 93 -1 O LYS A 92 N GLU A 27 SHEET 1 C 5 VAL A 119 LYS A 123 0 SHEET 2 C 5 TYR A 97 LEU A 100 -1 N ILE A 99 O ARG A 120 SHEET 3 C 5 ARG A 129 LEU A 133 1 O LEU A 133 N VAL A 98 SHEET 4 C 5 ILE A 139 ILE A 145 -1 O GLY A 143 N VAL A 130 SHEET 5 C 5 ILE A 154 LYS A 158 -1 O LYS A 155 N LEU A 144 SHEET 1 D 5 ARG B 6 ARG B 9 0 SHEET 2 D 5 PHE B 33 GLU B 37 -1 O VAL B 35 N ARG B 8 SHEET 3 D 5 ARG B 41 ALA B 45 -1 O TYR B 44 N CYS B 34 SHEET 4 D 5 THR B 66 VAL B 73 -1 O GLY B 69 N VAL B 43 SHEET 5 D 5 GLU B 79 PRO B 83 -1 O TYR B 82 N THR B 70 SHEET 1 E 2 GLY B 26 LEU B 28 0 SHEET 2 E 2 ILE B 91 LEU B 93 -1 O LYS B 92 N GLU B 27 SHEET 1 F 5 VAL B 119 LYS B 123 0 SHEET 2 F 5 TYR B 97 LEU B 100 -1 N ILE B 99 O ARG B 120 SHEET 3 F 5 ARG B 129 LEU B 133 1 O LEU B 133 N VAL B 98 SHEET 4 F 5 ILE B 139 ILE B 145 -1 O GLY B 141 N VAL B 132 SHEET 5 F 5 ILE B 154 LYS B 158 -1 O LYS B 155 N LEU B 144 CRYST1 88.492 90.284 63.347 90.00 134.29 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011300 0.000000 0.011024 0.00000 SCALE2 0.000000 0.011076 0.000000 0.00000 SCALE3 0.000000 0.000000 0.022053 0.00000