data_2P39 # _entry.id 2P39 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.377 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2P39 pdb_00002p39 10.2210/pdb2p39/pdb RCSB RCSB041910 ? ? WWPDB D_1000041910 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 2P23 _pdbx_database_related.details 'Crystal structure of human FGF19' _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2P39 _pdbx_database_status.recvd_initial_deposition_date 2007-03-08 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _audit_author.name 'Mohammadi, M.' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Molecular insights into the klotho-dependent, endocrine mode of action of fibroblast growth factor 19 subfamily members.' _citation.journal_abbrev Mol.Cell.Biol. _citation.journal_volume 27 _citation.page_first 3417 _citation.page_last 3428 _citation.year 2007 _citation.journal_id_ASTM MCEBD4 _citation.country US _citation.journal_id_ISSN 0270-7306 _citation.journal_id_CSD 2044 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17339340 _citation.pdbx_database_id_DOI 10.1128/MCB.02249-06 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Goetz, R.' 1 ? primary 'Beenken, A.' 2 ? primary 'Ibrahimi, O.A.' 3 ? primary 'Kalinina, J.' 4 ? primary 'Olsen, S.K.' 5 ? primary 'Eliseenkova, A.V.' 6 ? primary 'Xu, C.' 7 ? primary 'Neubert, T.A.' 8 ? primary 'Zhang, F.' 9 ? primary 'Linhardt, R.J.' 10 ? primary 'Yu, X.' 11 ? primary 'White, K.E.' 12 ? primary 'Inagaki, T.' 13 ? primary 'Kliewer, S.A.' 14 ? primary 'Yamamoto, M.' 15 ? primary 'Kurosu, H.' 16 ? primary 'Ogawa, Y.' 17 ? primary 'Kuro-O, M.' 18 ? primary 'Lanske, B.' 19 ? primary 'Razzaque, M.S.' 20 ? primary 'Mohammadi, M.' 21 ? # _cell.entry_id 2P39 _cell.length_a 38.811 _cell.length_b 47.094 _cell.length_c 84.931 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2P39 _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Fibroblast growth factor 23' 17856.234 1 ? ? ? ? 2 branched man '1,3,4,6-tetra-O-sulfo-beta-D-fructofuranose-(2-1)-2,3,4,6-tetra-O-sulfonato-alpha-D-glucopyranose' 982.803 1 ? ? ? ? 3 water nat water 18.015 93 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'FGF-23, Tumor-derived hypophosphatemia-inducing factor' 2 'sucrose octasulfate' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;YPNASPLLGSSWGGLIHLYTATARNSYHLQIHKNGHVDGAPHQTIYSALMIRSEDAGFVVITGVMSRRYLCMDFRGNIFG SHYFDPENCRFQHQTLENGYDVYHSPQYHFLVSLGRAKRAFLPGMNPPPYSQFLSRRNEIPLIHFNTPIPRRHTR ; _entity_poly.pdbx_seq_one_letter_code_can ;YPNASPLLGSSWGGLIHLYTATARNSYHLQIHKNGHVDGAPHQTIYSALMIRSEDAGFVVITGVMSRRYLCMDFRGNIFG SHYFDPENCRFQHQTLENGYDVYHSPQYHFLVSLGRAKRAFLPGMNPPPYSQFLSRRNEIPLIHFNTPIPRRHTR ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 TYR n 1 2 PRO n 1 3 ASN n 1 4 ALA n 1 5 SER n 1 6 PRO n 1 7 LEU n 1 8 LEU n 1 9 GLY n 1 10 SER n 1 11 SER n 1 12 TRP n 1 13 GLY n 1 14 GLY n 1 15 LEU n 1 16 ILE n 1 17 HIS n 1 18 LEU n 1 19 TYR n 1 20 THR n 1 21 ALA n 1 22 THR n 1 23 ALA n 1 24 ARG n 1 25 ASN n 1 26 SER n 1 27 TYR n 1 28 HIS n 1 29 LEU n 1 30 GLN n 1 31 ILE n 1 32 HIS n 1 33 LYS n 1 34 ASN n 1 35 GLY n 1 36 HIS n 1 37 VAL n 1 38 ASP n 1 39 GLY n 1 40 ALA n 1 41 PRO n 1 42 HIS n 1 43 GLN n 1 44 THR n 1 45 ILE n 1 46 TYR n 1 47 SER n 1 48 ALA n 1 49 LEU n 1 50 MET n 1 51 ILE n 1 52 ARG n 1 53 SER n 1 54 GLU n 1 55 ASP n 1 56 ALA n 1 57 GLY n 1 58 PHE n 1 59 VAL n 1 60 VAL n 1 61 ILE n 1 62 THR n 1 63 GLY n 1 64 VAL n 1 65 MET n 1 66 SER n 1 67 ARG n 1 68 ARG n 1 69 TYR n 1 70 LEU n 1 71 CYS n 1 72 MET n 1 73 ASP n 1 74 PHE n 1 75 ARG n 1 76 GLY n 1 77 ASN n 1 78 ILE n 1 79 PHE n 1 80 GLY n 1 81 SER n 1 82 HIS n 1 83 TYR n 1 84 PHE n 1 85 ASP n 1 86 PRO n 1 87 GLU n 1 88 ASN n 1 89 CYS n 1 90 ARG n 1 91 PHE n 1 92 GLN n 1 93 HIS n 1 94 GLN n 1 95 THR n 1 96 LEU n 1 97 GLU n 1 98 ASN n 1 99 GLY n 1 100 TYR n 1 101 ASP n 1 102 VAL n 1 103 TYR n 1 104 HIS n 1 105 SER n 1 106 PRO n 1 107 GLN n 1 108 TYR n 1 109 HIS n 1 110 PHE n 1 111 LEU n 1 112 VAL n 1 113 SER n 1 114 LEU n 1 115 GLY n 1 116 ARG n 1 117 ALA n 1 118 LYS n 1 119 ARG n 1 120 ALA n 1 121 PHE n 1 122 LEU n 1 123 PRO n 1 124 GLY n 1 125 MET n 1 126 ASN n 1 127 PRO n 1 128 PRO n 1 129 PRO n 1 130 TYR n 1 131 SER n 1 132 GLN n 1 133 PHE n 1 134 LEU n 1 135 SER n 1 136 ARG n 1 137 ARG n 1 138 ASN n 1 139 GLU n 1 140 ILE n 1 141 PRO n 1 142 LEU n 1 143 ILE n 1 144 HIS n 1 145 PHE n 1 146 ASN n 1 147 THR n 1 148 PRO n 1 149 ILE n 1 150 PRO n 1 151 ARG n 1 152 ARG n 1 153 HIS n 1 154 THR n 1 155 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene 'FGF23, HYPF' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 (DE3) pLys-S' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code FGF23_HUMAN _struct_ref.pdbx_db_accession Q9GZV9 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;YPNASPLLGSSWGGLIHLYTATARNSYHLQIHKNGHVDGAPHQTIYSALMIRSEDAGFVVITGVMSRRYLCMDFRGNIFG SHYFDPENCRFQHQTLENGYDVYHSPQYHFLVSLGRAKRAFLPGMNPPPYSQFLSRRNEIPLIHFNTPIPRRHTR ; _struct_ref.pdbx_align_begin 25 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2P39 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 155 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9GZV9 _struct_ref_seq.db_align_beg 25 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 179 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 25 _struct_ref_seq.pdbx_auth_seq_align_end 179 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GU4 'D-saccharide, alpha linking' n 2,3,4,6-tetra-O-sulfonato-alpha-D-glucopyranose '2,3,4,6-tetra-O-sulfonato-alpha-D-glucose; 2,3,4,6-tetra-O-sulfonato-D-glucose; 2,3,4,6-tetra-O-sulfonato-glucose' 'C6 H12 O18 S4' 500.409 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 YYJ 'D-saccharide, beta linking' n 1,3,4,6-tetra-O-sulfo-beta-D-fructofuranose ? 'C6 H12 O18 S4' 500.409 # _exptl.entry_id 2P39 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.17 _exptl_crystal.density_percent_sol 43.37 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_details '100 mM Tris-HCl, 1.0 M (NH4)2SO4, 10 mM [Co(NH3)6]Cl3, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2005-07-29 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'KOHZU DOUBLE CRYSTAL' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97924 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X4A' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X4A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97924 # _reflns.entry_id 2P39 _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.d_resolution_high 1.5 _reflns.d_resolution_low 50 _reflns.number_all 25550 _reflns.number_obs 25550 _reflns.percent_possible_obs 99.5 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.059 _reflns.pdbx_netI_over_sigmaI 26.1 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 11.9 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.5 _reflns_shell.d_res_low 1.55 _reflns_shell.percent_possible_all 95.6 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.297 _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy 5.7 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 2408 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 2P39 _refine.ls_d_res_high 1.5 _refine.ls_d_res_low 25 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_ls_sigma_I 0 _refine.ls_number_reflns_all 25152 _refine.ls_number_reflns_obs 25152 _refine.ls_number_reflns_R_free 2496 _refine.ls_percent_reflns_obs 100 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_work 0.203 _refine.ls_R_factor_R_free 0.214 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'PDB ENTRY 2P23' _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details Random _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_mean ? _refine.aniso_B[1][1] -2.243 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][2] 2.016 _refine.aniso_B[2][3] 0.000 _refine.aniso_B[3][3] 0.227 _refine.details ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_overall_ESU_R ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1113 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 55 _refine_hist.number_atoms_solvent 93 _refine_hist.number_atoms_total 1261 _refine_hist.d_res_high 1.5 _refine_hist.d_res_low 25 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.005595 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d 1.37432 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.72625 ? ? ? 'X-RAY DIFFRACTION' ? # _struct.entry_id 2P39 _struct.title 'Crystal structure of human FGF23' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2P39 _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN' _struct_keywords.text 'atypical beta-trefoil fold, SIGNALING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 _struct_biol.details ? _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 128 ? GLN A 132 ? PRO A 152 GLN A 156 5 ? 5 HELX_P HELX_P2 2 PRO A 141 ? PHE A 145 ? PRO A 165 PHE A 169 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 71 SG ? ? ? 1_555 A CYS 89 SG ? ? A CYS 95 A CYS 113 1_555 ? ? ? ? ? ? ? 2.341 ? ? covale1 covale both ? B GU4 . C1 ? ? ? 1_555 B YYJ . O2 ? ? B GU4 1 B YYJ 2 1_555 ? ? ? ? ? ? ? 1.446 sing ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 2 ? C ? 4 ? D ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 16 ? TYR A 19 ? ILE A 40 TYR A 43 A 2 LEU A 134 ? ARG A 137 ? LEU A 158 ARG A 161 B 1 HIS A 28 ? ILE A 31 ? HIS A 52 ILE A 55 B 2 VAL A 37 ? ALA A 40 ? VAL A 61 ALA A 64 C 1 LEU A 49 ? SER A 53 ? LEU A 73 SER A 77 C 2 PHE A 58 ? GLY A 63 ? PHE A 82 GLY A 87 C 3 ARG A 68 ? MET A 72 ? ARG A 92 MET A 96 C 4 ILE A 78 ? SER A 81 ? ILE A 102 SER A 105 D 1 LEU A 49 ? SER A 53 ? LEU A 73 SER A 77 D 2 PHE A 58 ? GLY A 63 ? PHE A 82 GLY A 87 D 3 PHE A 91 ? THR A 95 ? PHE A 115 THR A 119 D 4 ASP A 101 ? HIS A 104 ? ASP A 125 HIS A 128 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N HIS A 17 ? N HIS A 41 O ARG A 136 ? O ARG A 160 B 1 2 N GLN A 30 ? N GLN A 54 O ASP A 38 ? O ASP A 62 C 1 2 N ARG A 52 ? N ARG A 76 O VAL A 60 ? O VAL A 84 C 2 3 N GLY A 63 ? N GLY A 87 O ARG A 68 ? O ARG A 92 C 3 4 N TYR A 69 ? N TYR A 93 O SER A 81 ? O SER A 105 D 1 2 N ARG A 52 ? N ARG A 76 O VAL A 60 ? O VAL A 84 D 2 3 N VAL A 59 ? N VAL A 83 O PHE A 91 ? O PHE A 115 D 3 4 N GLN A 92 ? N GLN A 116 O HIS A 104 ? O HIS A 128 # _database_PDB_matrix.entry_id 2P39 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2P39 _atom_sites.fract_transf_matrix[1][1] 0.025766 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.021234 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011774 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 TYR 1 25 ? ? ? A . n A 1 2 PRO 2 26 ? ? ? A . n A 1 3 ASN 3 27 ? ? ? A . n A 1 4 ALA 4 28 ? ? ? A . n A 1 5 SER 5 29 29 SER SER A . n A 1 6 PRO 6 30 30 PRO PRO A . n A 1 7 LEU 7 31 31 LEU LEU A . n A 1 8 LEU 8 32 32 LEU LEU A . n A 1 9 GLY 9 33 33 GLY GLY A . n A 1 10 SER 10 34 34 SER SER A . n A 1 11 SER 11 35 35 SER SER A . n A 1 12 TRP 12 36 36 TRP TRP A . n A 1 13 GLY 13 37 37 GLY GLY A . n A 1 14 GLY 14 38 38 GLY GLY A . n A 1 15 LEU 15 39 39 LEU LEU A . n A 1 16 ILE 16 40 40 ILE ILE A . n A 1 17 HIS 17 41 41 HIS HIS A . n A 1 18 LEU 18 42 42 LEU LEU A . n A 1 19 TYR 19 43 43 TYR TYR A . n A 1 20 THR 20 44 44 THR THR A . n A 1 21 ALA 21 45 45 ALA ALA A . n A 1 22 THR 22 46 46 THR THR A . n A 1 23 ALA 23 47 47 ALA ALA A . n A 1 24 ARG 24 48 48 ARG ARG A . n A 1 25 ASN 25 49 49 ASN ASN A . n A 1 26 SER 26 50 50 SER SER A . n A 1 27 TYR 27 51 51 TYR TYR A . n A 1 28 HIS 28 52 52 HIS HIS A . n A 1 29 LEU 29 53 53 LEU LEU A . n A 1 30 GLN 30 54 54 GLN GLN A . n A 1 31 ILE 31 55 55 ILE ILE A . n A 1 32 HIS 32 56 56 HIS HIS A . n A 1 33 LYS 33 57 57 LYS ALA A . n A 1 34 ASN 34 58 58 ASN ASN A . n A 1 35 GLY 35 59 59 GLY GLY A . n A 1 36 HIS 36 60 60 HIS HIS A . n A 1 37 VAL 37 61 61 VAL VAL A . n A 1 38 ASP 38 62 62 ASP ASP A . n A 1 39 GLY 39 63 63 GLY GLY A . n A 1 40 ALA 40 64 64 ALA ALA A . n A 1 41 PRO 41 65 65 PRO PRO A . n A 1 42 HIS 42 66 66 HIS HIS A . n A 1 43 GLN 43 67 67 GLN GLN A . n A 1 44 THR 44 68 68 THR THR A . n A 1 45 ILE 45 69 69 ILE ILE A . n A 1 46 TYR 46 70 70 TYR TYR A . n A 1 47 SER 47 71 71 SER SER A . n A 1 48 ALA 48 72 72 ALA ALA A . n A 1 49 LEU 49 73 73 LEU LEU A . n A 1 50 MET 50 74 74 MET MET A . n A 1 51 ILE 51 75 75 ILE ILE A . n A 1 52 ARG 52 76 76 ARG ALA A . n A 1 53 SER 53 77 77 SER SER A . n A 1 54 GLU 54 78 78 GLU GLU A . n A 1 55 ASP 55 79 79 ASP ASP A . n A 1 56 ALA 56 80 80 ALA ALA A . n A 1 57 GLY 57 81 81 GLY GLY A . n A 1 58 PHE 58 82 82 PHE PHE A . n A 1 59 VAL 59 83 83 VAL VAL A . n A 1 60 VAL 60 84 84 VAL VAL A . n A 1 61 ILE 61 85 85 ILE ILE A . n A 1 62 THR 62 86 86 THR THR A . n A 1 63 GLY 63 87 87 GLY GLY A . n A 1 64 VAL 64 88 88 VAL VAL A . n A 1 65 MET 65 89 89 MET MET A . n A 1 66 SER 66 90 90 SER SER A . n A 1 67 ARG 67 91 91 ARG ARG A . n A 1 68 ARG 68 92 92 ARG ARG A . n A 1 69 TYR 69 93 93 TYR TYR A . n A 1 70 LEU 70 94 94 LEU LEU A . n A 1 71 CYS 71 95 95 CYS CYS A . n A 1 72 MET 72 96 96 MET MET A . n A 1 73 ASP 73 97 97 ASP ASP A . n A 1 74 PHE 74 98 98 PHE PHE A . n A 1 75 ARG 75 99 99 ARG ALA A . n A 1 76 GLY 76 100 100 GLY GLY A . n A 1 77 ASN 77 101 101 ASN ASN A . n A 1 78 ILE 78 102 102 ILE ILE A . n A 1 79 PHE 79 103 103 PHE PHE A . n A 1 80 GLY 80 104 104 GLY GLY A . n A 1 81 SER 81 105 105 SER SER A . n A 1 82 HIS 82 106 106 HIS HIS A . n A 1 83 TYR 83 107 107 TYR TYR A . n A 1 84 PHE 84 108 108 PHE PHE A . n A 1 85 ASP 85 109 109 ASP ASP A . n A 1 86 PRO 86 110 110 PRO PRO A . n A 1 87 GLU 87 111 111 GLU ALA A . n A 1 88 ASN 88 112 112 ASN ASN A . n A 1 89 CYS 89 113 113 CYS CYS A . n A 1 90 ARG 90 114 114 ARG ARG A . n A 1 91 PHE 91 115 115 PHE PHE A . n A 1 92 GLN 92 116 116 GLN GLN A . n A 1 93 HIS 93 117 117 HIS HIS A . n A 1 94 GLN 94 118 118 GLN GLN A . n A 1 95 THR 95 119 119 THR THR A . n A 1 96 LEU 96 120 120 LEU LEU A . n A 1 97 GLU 97 121 121 GLU ALA A . n A 1 98 ASN 98 122 122 ASN ASN A . n A 1 99 GLY 99 123 123 GLY GLY A . n A 1 100 TYR 100 124 124 TYR TYR A . n A 1 101 ASP 101 125 125 ASP ASP A . n A 1 102 VAL 102 126 126 VAL VAL A . n A 1 103 TYR 103 127 127 TYR TYR A . n A 1 104 HIS 104 128 128 HIS HIS A . n A 1 105 SER 105 129 129 SER SER A . n A 1 106 PRO 106 130 130 PRO PRO A . n A 1 107 GLN 107 131 131 GLN ALA A . n A 1 108 TYR 108 132 132 TYR TYR A . n A 1 109 HIS 109 133 133 HIS HIS A . n A 1 110 PHE 110 134 134 PHE PHE A . n A 1 111 LEU 111 135 135 LEU LEU A . n A 1 112 VAL 112 136 136 VAL VAL A . n A 1 113 SER 113 137 137 SER SER A . n A 1 114 LEU 114 138 138 LEU LEU A . n A 1 115 GLY 115 139 139 GLY GLY A . n A 1 116 ARG 116 140 140 ARG ARG A . n A 1 117 ALA 117 141 141 ALA ALA A . n A 1 118 LYS 118 142 142 LYS LYS A . n A 1 119 ARG 119 143 143 ARG ARG A . n A 1 120 ALA 120 144 144 ALA ALA A . n A 1 121 PHE 121 145 145 PHE PHE A . n A 1 122 LEU 122 146 146 LEU LEU A . n A 1 123 PRO 123 147 147 PRO PRO A . n A 1 124 GLY 124 148 148 GLY GLY A . n A 1 125 MET 125 149 149 MET MET A . n A 1 126 ASN 126 150 150 ASN ASN A . n A 1 127 PRO 127 151 151 PRO PRO A . n A 1 128 PRO 128 152 152 PRO PRO A . n A 1 129 PRO 129 153 153 PRO PRO A . n A 1 130 TYR 130 154 154 TYR TYR A . n A 1 131 SER 131 155 155 SER SER A . n A 1 132 GLN 132 156 156 GLN GLN A . n A 1 133 PHE 133 157 157 PHE PHE A . n A 1 134 LEU 134 158 158 LEU LEU A . n A 1 135 SER 135 159 159 SER SER A . n A 1 136 ARG 136 160 160 ARG ARG A . n A 1 137 ARG 137 161 161 ARG ALA A . n A 1 138 ASN 138 162 162 ASN ASN A . n A 1 139 GLU 139 163 163 GLU GLU A . n A 1 140 ILE 140 164 164 ILE ILE A . n A 1 141 PRO 141 165 165 PRO PRO A . n A 1 142 LEU 142 166 166 LEU LEU A . n A 1 143 ILE 143 167 167 ILE ILE A . n A 1 144 HIS 144 168 168 HIS HIS A . n A 1 145 PHE 145 169 169 PHE PHE A . n A 1 146 ASN 146 170 170 ASN ALA A . n A 1 147 THR 147 171 ? ? ? A . n A 1 148 PRO 148 172 ? ? ? A . n A 1 149 ILE 149 173 ? ? ? A . n A 1 150 PRO 150 174 ? ? ? A . n A 1 151 ARG 151 175 ? ? ? A . n A 1 152 ARG 152 176 ? ? ? A . n A 1 153 HIS 153 177 ? ? ? A . n A 1 154 THR 154 178 ? ? ? A . n A 1 155 ARG 155 179 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 HOH 1 1000 1000 HOH HOH A . C 3 HOH 2 1001 1001 HOH HOH A . C 3 HOH 3 1002 1002 HOH HOH A . C 3 HOH 4 1003 1003 HOH HOH A . C 3 HOH 5 1004 1004 HOH HOH A . C 3 HOH 6 1005 1005 HOH HOH A . C 3 HOH 7 1006 1006 HOH HOH A . C 3 HOH 8 1007 1007 HOH HOH A . C 3 HOH 9 1008 1008 HOH HOH A . C 3 HOH 10 1009 1009 HOH HOH A . C 3 HOH 11 1010 1010 HOH HOH A . C 3 HOH 12 1011 1011 HOH HOH A . C 3 HOH 13 1012 1012 HOH HOH A . C 3 HOH 14 1013 1013 HOH HOH A . C 3 HOH 15 1014 1014 HOH HOH A . C 3 HOH 16 1015 1015 HOH HOH A . C 3 HOH 17 1016 1016 HOH HOH A . C 3 HOH 18 1017 1017 HOH HOH A . C 3 HOH 19 1018 1018 HOH HOH A . C 3 HOH 20 1019 1019 HOH HOH A . C 3 HOH 21 1020 1020 HOH HOH A . C 3 HOH 22 1021 1021 HOH HOH A . C 3 HOH 23 1022 1022 HOH HOH A . C 3 HOH 24 1023 1023 HOH HOH A . C 3 HOH 25 1024 1024 HOH HOH A . C 3 HOH 26 1025 1025 HOH HOH A . C 3 HOH 27 1026 1026 HOH HOH A . C 3 HOH 28 1027 1027 HOH HOH A . C 3 HOH 29 1028 1028 HOH HOH A . C 3 HOH 30 1029 1029 HOH HOH A . C 3 HOH 31 1030 1030 HOH HOH A . C 3 HOH 32 1031 1031 HOH HOH A . C 3 HOH 33 1032 1032 HOH HOH A . C 3 HOH 34 1033 1033 HOH HOH A . C 3 HOH 35 1034 1034 HOH HOH A . C 3 HOH 36 1035 1035 HOH HOH A . C 3 HOH 37 1036 1036 HOH HOH A . C 3 HOH 38 1037 1037 HOH HOH A . C 3 HOH 39 1038 1038 HOH HOH A . C 3 HOH 40 1039 1039 HOH HOH A . C 3 HOH 41 1040 1040 HOH HOH A . C 3 HOH 42 1041 1041 HOH HOH A . C 3 HOH 43 1042 1042 HOH HOH A . C 3 HOH 44 1043 1043 HOH HOH A . C 3 HOH 45 1044 1044 HOH HOH A . C 3 HOH 46 1045 1045 HOH HOH A . C 3 HOH 47 1046 1046 HOH HOH A . C 3 HOH 48 1047 1047 HOH HOH A . C 3 HOH 49 1048 1048 HOH HOH A . C 3 HOH 50 1049 1049 HOH HOH A . C 3 HOH 51 1050 1050 HOH HOH A . C 3 HOH 52 1051 1051 HOH HOH A . C 3 HOH 53 1052 1052 HOH HOH A . C 3 HOH 54 1053 1053 HOH HOH A . C 3 HOH 55 1054 1054 HOH HOH A . C 3 HOH 56 1055 1055 HOH HOH A . C 3 HOH 57 1056 1056 HOH HOH A . C 3 HOH 58 1057 1057 HOH HOH A . C 3 HOH 59 1058 1058 HOH HOH A . C 3 HOH 60 1059 1059 HOH HOH A . C 3 HOH 61 1060 1060 HOH HOH A . C 3 HOH 62 1061 1061 HOH HOH A . C 3 HOH 63 1062 1062 HOH HOH A . C 3 HOH 64 1063 1063 HOH HOH A . C 3 HOH 65 1064 1064 HOH HOH A . C 3 HOH 66 1065 1065 HOH HOH A . C 3 HOH 67 1066 1066 HOH HOH A . C 3 HOH 68 1067 1067 HOH HOH A . C 3 HOH 69 1068 1068 HOH HOH A . C 3 HOH 70 1069 1069 HOH HOH A . C 3 HOH 71 1070 1070 HOH HOH A . C 3 HOH 72 1071 1071 HOH HOH A . C 3 HOH 73 1072 1072 HOH HOH A . C 3 HOH 74 1073 1073 HOH HOH A . C 3 HOH 75 1074 1074 HOH HOH A . C 3 HOH 76 1075 1075 HOH HOH A . C 3 HOH 77 1076 1076 HOH HOH A . C 3 HOH 78 1077 1077 HOH HOH A . C 3 HOH 79 1078 1078 HOH HOH A . C 3 HOH 80 1079 1079 HOH HOH A . C 3 HOH 81 1080 1080 HOH HOH A . C 3 HOH 82 1081 1081 HOH HOH A . C 3 HOH 83 1082 1082 HOH HOH A . C 3 HOH 84 1083 1083 HOH HOH A . C 3 HOH 85 1084 1084 HOH HOH A . C 3 HOH 86 1085 1085 HOH HOH A . C 3 HOH 87 1086 1086 HOH HOH A . C 3 HOH 88 1087 1087 HOH HOH A . C 3 HOH 89 1088 1088 HOH HOH A . C 3 HOH 90 1089 1089 HOH HOH A . C 3 HOH 91 1090 1090 HOH HOH A . C 3 HOH 92 1091 1091 HOH HOH A . C 3 HOH 93 1092 1092 HOH HOH A . # _pdbx_molecule_features.prd_id PRD_900013 _pdbx_molecule_features.name 'sucrose octasulfate' _pdbx_molecule_features.type Oligosaccharide _pdbx_molecule_features.class 'Substrate analog' _pdbx_molecule_features.details 'oligosaccharide with reducing-end-to-reducing-end glycosidic bond' # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_900013 _pdbx_molecule.asym_id B # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-04-10 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 2 0 2020-07-29 5 'Structure model' 2 1 2023-08-30 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 4 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Atomic model' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Non-polymer description' 7 4 'Structure model' 'Structure summary' 8 5 'Structure model' 'Data collection' 9 5 'Structure model' 'Database references' 10 5 'Structure model' 'Refinement description' 11 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' atom_site 2 4 'Structure model' chem_comp 3 4 'Structure model' entity 4 4 'Structure model' entity_name_com 5 4 'Structure model' pdbx_branch_scheme 6 4 'Structure model' pdbx_chem_comp_identifier 7 4 'Structure model' pdbx_entity_branch 8 4 'Structure model' pdbx_entity_branch_descriptor 9 4 'Structure model' pdbx_entity_branch_link 10 4 'Structure model' pdbx_entity_branch_list 11 4 'Structure model' pdbx_entity_nonpoly 12 4 'Structure model' pdbx_molecule_features 13 4 'Structure model' pdbx_nonpoly_scheme 14 4 'Structure model' struct_conn 15 4 'Structure model' struct_conn_type 16 4 'Structure model' struct_site 17 4 'Structure model' struct_site_gen 18 5 'Structure model' chem_comp 19 5 'Structure model' chem_comp_atom 20 5 'Structure model' chem_comp_bond 21 5 'Structure model' database_2 22 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_atom_site.B_iso_or_equiv' 2 4 'Structure model' '_atom_site.Cartn_x' 3 4 'Structure model' '_atom_site.Cartn_y' 4 4 'Structure model' '_atom_site.Cartn_z' 5 4 'Structure model' '_atom_site.auth_asym_id' 6 4 'Structure model' '_atom_site.auth_atom_id' 7 4 'Structure model' '_atom_site.auth_comp_id' 8 4 'Structure model' '_atom_site.auth_seq_id' 9 4 'Structure model' '_atom_site.label_atom_id' 10 4 'Structure model' '_atom_site.label_comp_id' 11 4 'Structure model' '_atom_site.type_symbol' 12 4 'Structure model' '_chem_comp.formula' 13 4 'Structure model' '_chem_comp.formula_weight' 14 4 'Structure model' '_chem_comp.id' 15 4 'Structure model' '_chem_comp.mon_nstd_flag' 16 4 'Structure model' '_chem_comp.name' 17 4 'Structure model' '_chem_comp.type' 18 4 'Structure model' '_entity.formula_weight' 19 4 'Structure model' '_entity.pdbx_description' 20 4 'Structure model' '_entity.type' 21 5 'Structure model' '_chem_comp.pdbx_synonyms' 22 5 'Structure model' '_database_2.pdbx_DOI' 23 5 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 AMoRE phasing . ? 2 CNS refinement 1.1 ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 35 ? ? -142.03 14.90 2 1 ASP A 62 ? ? -147.48 -157.29 3 1 GLU A 78 ? ? -117.88 -164.42 4 1 HIS A 133 ? ? 72.62 -17.73 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 57 ? CG ? A LYS 33 CG 2 1 Y 1 A LYS 57 ? CD ? A LYS 33 CD 3 1 Y 1 A LYS 57 ? CE ? A LYS 33 CE 4 1 Y 1 A LYS 57 ? NZ ? A LYS 33 NZ 5 1 Y 1 A ARG 76 ? CG ? A ARG 52 CG 6 1 Y 1 A ARG 76 ? CD ? A ARG 52 CD 7 1 Y 1 A ARG 76 ? NE ? A ARG 52 NE 8 1 Y 1 A ARG 76 ? CZ ? A ARG 52 CZ 9 1 Y 1 A ARG 76 ? NH1 ? A ARG 52 NH1 10 1 Y 1 A ARG 76 ? NH2 ? A ARG 52 NH2 11 1 Y 1 A ARG 99 ? CG ? A ARG 75 CG 12 1 Y 1 A ARG 99 ? CD ? A ARG 75 CD 13 1 Y 1 A ARG 99 ? NE ? A ARG 75 NE 14 1 Y 1 A ARG 99 ? CZ ? A ARG 75 CZ 15 1 Y 1 A ARG 99 ? NH1 ? A ARG 75 NH1 16 1 Y 1 A ARG 99 ? NH2 ? A ARG 75 NH2 17 1 Y 1 A GLU 111 ? CG ? A GLU 87 CG 18 1 Y 1 A GLU 111 ? CD ? A GLU 87 CD 19 1 Y 1 A GLU 111 ? OE1 ? A GLU 87 OE1 20 1 Y 1 A GLU 111 ? OE2 ? A GLU 87 OE2 21 1 Y 1 A GLU 121 ? CG ? A GLU 97 CG 22 1 Y 1 A GLU 121 ? CD ? A GLU 97 CD 23 1 Y 1 A GLU 121 ? OE1 ? A GLU 97 OE1 24 1 Y 1 A GLU 121 ? OE2 ? A GLU 97 OE2 25 1 Y 1 A GLN 131 ? CG ? A GLN 107 CG 26 1 Y 1 A GLN 131 ? CD ? A GLN 107 CD 27 1 Y 1 A GLN 131 ? OE1 ? A GLN 107 OE1 28 1 Y 1 A GLN 131 ? NE2 ? A GLN 107 NE2 29 1 Y 1 A ARG 161 ? CG ? A ARG 137 CG 30 1 Y 1 A ARG 161 ? CD ? A ARG 137 CD 31 1 Y 1 A ARG 161 ? NE ? A ARG 137 NE 32 1 Y 1 A ARG 161 ? CZ ? A ARG 137 CZ 33 1 Y 1 A ARG 161 ? NH1 ? A ARG 137 NH1 34 1 Y 1 A ARG 161 ? NH2 ? A ARG 137 NH2 35 1 Y 1 A ASN 170 ? CG ? A ASN 146 CG 36 1 Y 1 A ASN 170 ? OD1 ? A ASN 146 OD1 37 1 Y 1 A ASN 170 ? ND2 ? A ASN 146 ND2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A TYR 25 ? A TYR 1 2 1 Y 1 A PRO 26 ? A PRO 2 3 1 Y 1 A ASN 27 ? A ASN 3 4 1 Y 1 A ALA 28 ? A ALA 4 5 1 Y 1 A THR 171 ? A THR 147 6 1 Y 1 A PRO 172 ? A PRO 148 7 1 Y 1 A ILE 173 ? A ILE 149 8 1 Y 1 A PRO 174 ? A PRO 150 9 1 Y 1 A ARG 175 ? A ARG 151 10 1 Y 1 A ARG 176 ? A ARG 152 11 1 Y 1 A HIS 177 ? A HIS 153 12 1 Y 1 A THR 178 ? A THR 154 13 1 Y 1 A ARG 179 ? A ARG 155 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 GU4 O1 O N N 137 GU4 C1 C N S 138 GU4 O5 O N N 139 GU4 C5 C N R 140 GU4 C6 C N N 141 GU4 O6 O N N 142 GU4 S6 S N N 143 GU4 O22 O N N 144 GU4 O23 O N N 145 GU4 O21 O N N 146 GU4 C4 C N R 147 GU4 O4 O N N 148 GU4 S4 S N N 149 GU4 O25 O N N 150 GU4 O26 O N N 151 GU4 O24 O N N 152 GU4 C3 C N S 153 GU4 O3 O N N 154 GU4 S3 S N N 155 GU4 O28 O N N 156 GU4 O29 O N N 157 GU4 O27 O N N 158 GU4 C2 C N R 159 GU4 O2 O N N 160 GU4 S2 S N N 161 GU4 O11 O N N 162 GU4 O12 O N N 163 GU4 O10 O N N 164 GU4 HO1 H N N 165 GU4 H1 H N N 166 GU4 H5 H N N 167 GU4 H61 H N N 168 GU4 H62 H N N 169 GU4 H4 H N N 170 GU4 H3 H N N 171 GU4 H2 H N N 172 GU4 HO21 H N N 173 GU4 HO24 H N N 174 GU4 HO29 H N N 175 GU4 HO10 H N N 176 HIS N N N N 177 HIS CA C N S 178 HIS C C N N 179 HIS O O N N 180 HIS CB C N N 181 HIS CG C Y N 182 HIS ND1 N Y N 183 HIS CD2 C Y N 184 HIS CE1 C Y N 185 HIS NE2 N Y N 186 HIS OXT O N N 187 HIS H H N N 188 HIS H2 H N N 189 HIS HA H N N 190 HIS HB2 H N N 191 HIS HB3 H N N 192 HIS HD1 H N N 193 HIS HD2 H N N 194 HIS HE1 H N N 195 HIS HE2 H N N 196 HIS HXT H N N 197 HOH O O N N 198 HOH H1 H N N 199 HOH H2 H N N 200 ILE N N N N 201 ILE CA C N S 202 ILE C C N N 203 ILE O O N N 204 ILE CB C N S 205 ILE CG1 C N N 206 ILE CG2 C N N 207 ILE CD1 C N N 208 ILE OXT O N N 209 ILE H H N N 210 ILE H2 H N N 211 ILE HA H N N 212 ILE HB H N N 213 ILE HG12 H N N 214 ILE HG13 H N N 215 ILE HG21 H N N 216 ILE HG22 H N N 217 ILE HG23 H N N 218 ILE HD11 H N N 219 ILE HD12 H N N 220 ILE HD13 H N N 221 ILE HXT H N N 222 LEU N N N N 223 LEU CA C N S 224 LEU C C N N 225 LEU O O N N 226 LEU CB C N N 227 LEU CG C N N 228 LEU CD1 C N N 229 LEU CD2 C N N 230 LEU OXT O N N 231 LEU H H N N 232 LEU H2 H N N 233 LEU HA H N N 234 LEU HB2 H N N 235 LEU HB3 H N N 236 LEU HG H N N 237 LEU HD11 H N N 238 LEU HD12 H N N 239 LEU HD13 H N N 240 LEU HD21 H N N 241 LEU HD22 H N N 242 LEU HD23 H N N 243 LEU HXT H N N 244 LYS N N N N 245 LYS CA C N S 246 LYS C C N N 247 LYS O O N N 248 LYS CB C N N 249 LYS CG C N N 250 LYS CD C N N 251 LYS CE C N N 252 LYS NZ N N N 253 LYS OXT O N N 254 LYS H H N N 255 LYS H2 H N N 256 LYS HA H N N 257 LYS HB2 H N N 258 LYS HB3 H N N 259 LYS HG2 H N N 260 LYS HG3 H N N 261 LYS HD2 H N N 262 LYS HD3 H N N 263 LYS HE2 H N N 264 LYS HE3 H N N 265 LYS HZ1 H N N 266 LYS HZ2 H N N 267 LYS HZ3 H N N 268 LYS HXT H N N 269 MET N N N N 270 MET CA C N S 271 MET C C N N 272 MET O O N N 273 MET CB C N N 274 MET CG C N N 275 MET SD S N N 276 MET CE C N N 277 MET OXT O N N 278 MET H H N N 279 MET H2 H N N 280 MET HA H N N 281 MET HB2 H N N 282 MET HB3 H N N 283 MET HG2 H N N 284 MET HG3 H N N 285 MET HE1 H N N 286 MET HE2 H N N 287 MET HE3 H N N 288 MET HXT H N N 289 PHE N N N N 290 PHE CA C N S 291 PHE C C N N 292 PHE O O N N 293 PHE CB C N N 294 PHE CG C Y N 295 PHE CD1 C Y N 296 PHE CD2 C Y N 297 PHE CE1 C Y N 298 PHE CE2 C Y N 299 PHE CZ C Y N 300 PHE OXT O N N 301 PHE H H N N 302 PHE H2 H N N 303 PHE HA H N N 304 PHE HB2 H N N 305 PHE HB3 H N N 306 PHE HD1 H N N 307 PHE HD2 H N N 308 PHE HE1 H N N 309 PHE HE2 H N N 310 PHE HZ H N N 311 PHE HXT H N N 312 PRO N N N N 313 PRO CA C N S 314 PRO C C N N 315 PRO O O N N 316 PRO CB C N N 317 PRO CG C N N 318 PRO CD C N N 319 PRO OXT O N N 320 PRO H H N N 321 PRO HA H N N 322 PRO HB2 H N N 323 PRO HB3 H N N 324 PRO HG2 H N N 325 PRO HG3 H N N 326 PRO HD2 H N N 327 PRO HD3 H N N 328 PRO HXT H N N 329 SER N N N N 330 SER CA C N S 331 SER C C N N 332 SER O O N N 333 SER CB C N N 334 SER OG O N N 335 SER OXT O N N 336 SER H H N N 337 SER H2 H N N 338 SER HA H N N 339 SER HB2 H N N 340 SER HB3 H N N 341 SER HG H N N 342 SER HXT H N N 343 THR N N N N 344 THR CA C N S 345 THR C C N N 346 THR O O N N 347 THR CB C N R 348 THR OG1 O N N 349 THR CG2 C N N 350 THR OXT O N N 351 THR H H N N 352 THR H2 H N N 353 THR HA H N N 354 THR HB H N N 355 THR HG1 H N N 356 THR HG21 H N N 357 THR HG22 H N N 358 THR HG23 H N N 359 THR HXT H N N 360 TRP N N N N 361 TRP CA C N S 362 TRP C C N N 363 TRP O O N N 364 TRP CB C N N 365 TRP CG C Y N 366 TRP CD1 C Y N 367 TRP CD2 C Y N 368 TRP NE1 N Y N 369 TRP CE2 C Y N 370 TRP CE3 C Y N 371 TRP CZ2 C Y N 372 TRP CZ3 C Y N 373 TRP CH2 C Y N 374 TRP OXT O N N 375 TRP H H N N 376 TRP H2 H N N 377 TRP HA H N N 378 TRP HB2 H N N 379 TRP HB3 H N N 380 TRP HD1 H N N 381 TRP HE1 H N N 382 TRP HE3 H N N 383 TRP HZ2 H N N 384 TRP HZ3 H N N 385 TRP HH2 H N N 386 TRP HXT H N N 387 TYR N N N N 388 TYR CA C N S 389 TYR C C N N 390 TYR O O N N 391 TYR CB C N N 392 TYR CG C Y N 393 TYR CD1 C Y N 394 TYR CD2 C Y N 395 TYR CE1 C Y N 396 TYR CE2 C Y N 397 TYR CZ C Y N 398 TYR OH O N N 399 TYR OXT O N N 400 TYR H H N N 401 TYR H2 H N N 402 TYR HA H N N 403 TYR HB2 H N N 404 TYR HB3 H N N 405 TYR HD1 H N N 406 TYR HD2 H N N 407 TYR HE1 H N N 408 TYR HE2 H N N 409 TYR HH H N N 410 TYR HXT H N N 411 VAL N N N N 412 VAL CA C N S 413 VAL C C N N 414 VAL O O N N 415 VAL CB C N N 416 VAL CG1 C N N 417 VAL CG2 C N N 418 VAL OXT O N N 419 VAL H H N N 420 VAL H2 H N N 421 VAL HA H N N 422 VAL HB H N N 423 VAL HG11 H N N 424 VAL HG12 H N N 425 VAL HG13 H N N 426 VAL HG21 H N N 427 VAL HG22 H N N 428 VAL HG23 H N N 429 VAL HXT H N N 430 YYJ C1 C N N 431 YYJ C2 C N R 432 YYJ C3 C N S 433 YYJ C4 C N R 434 YYJ C5 C N R 435 YYJ C6 C N N 436 YYJ O1 O N N 437 YYJ O1S1 O N N 438 YYJ O1S3 O N N 439 YYJ O1S4 O N N 440 YYJ O1S6 O N N 441 YYJ O2 O N N 442 YYJ O2S1 O N N 443 YYJ O2S3 O N N 444 YYJ O2S4 O N N 445 YYJ O2S6 O N N 446 YYJ O3 O N N 447 YYJ O3S1 O N N 448 YYJ O3S3 O N N 449 YYJ O3S4 O N N 450 YYJ O3S6 O N N 451 YYJ O4 O N N 452 YYJ O5 O N N 453 YYJ O6 O N N 454 YYJ S1 S N N 455 YYJ S3 S N N 456 YYJ S4 S N N 457 YYJ S6 S N N 458 YYJ H11 H N N 459 YYJ H12 H N N 460 YYJ H1S1 H N N 461 YYJ H1S3 H N N 462 YYJ H1S4 H N N 463 YYJ H1S6 H N N 464 YYJ HO2 H N N 465 YYJ H3 H N N 466 YYJ H4 H N N 467 YYJ H5 H N N 468 YYJ H61 H N N 469 YYJ H62 H N N 470 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 GU4 O1 C1 sing N N 129 GU4 O1 HO1 sing N N 130 GU4 C1 O5 sing N N 131 GU4 C1 C2 sing N N 132 GU4 C1 H1 sing N N 133 GU4 O5 C5 sing N N 134 GU4 C5 C6 sing N N 135 GU4 C5 C4 sing N N 136 GU4 C5 H5 sing N N 137 GU4 C6 O6 sing N N 138 GU4 C6 H61 sing N N 139 GU4 C6 H62 sing N N 140 GU4 O6 S6 sing N N 141 GU4 S6 O22 doub N N 142 GU4 S6 O23 doub N N 143 GU4 S6 O21 sing N N 144 GU4 C4 O4 sing N N 145 GU4 C4 C3 sing N N 146 GU4 C4 H4 sing N N 147 GU4 O4 S4 sing N N 148 GU4 S4 O25 doub N N 149 GU4 S4 O26 doub N N 150 GU4 S4 O24 sing N N 151 GU4 C3 O3 sing N N 152 GU4 C3 C2 sing N N 153 GU4 C3 H3 sing N N 154 GU4 O3 S3 sing N N 155 GU4 S3 O28 doub N N 156 GU4 S3 O29 sing N N 157 GU4 S3 O27 doub N N 158 GU4 C2 O2 sing N N 159 GU4 C2 H2 sing N N 160 GU4 O2 S2 sing N N 161 GU4 S2 O11 doub N N 162 GU4 S2 O12 doub N N 163 GU4 S2 O10 sing N N 164 GU4 O21 HO21 sing N N 165 GU4 O24 HO24 sing N N 166 GU4 O29 HO29 sing N N 167 GU4 O10 HO10 sing N N 168 HIS N CA sing N N 169 HIS N H sing N N 170 HIS N H2 sing N N 171 HIS CA C sing N N 172 HIS CA CB sing N N 173 HIS CA HA sing N N 174 HIS C O doub N N 175 HIS C OXT sing N N 176 HIS CB CG sing N N 177 HIS CB HB2 sing N N 178 HIS CB HB3 sing N N 179 HIS CG ND1 sing Y N 180 HIS CG CD2 doub Y N 181 HIS ND1 CE1 doub Y N 182 HIS ND1 HD1 sing N N 183 HIS CD2 NE2 sing Y N 184 HIS CD2 HD2 sing N N 185 HIS CE1 NE2 sing Y N 186 HIS CE1 HE1 sing N N 187 HIS NE2 HE2 sing N N 188 HIS OXT HXT sing N N 189 HOH O H1 sing N N 190 HOH O H2 sing N N 191 ILE N CA sing N N 192 ILE N H sing N N 193 ILE N H2 sing N N 194 ILE CA C sing N N 195 ILE CA CB sing N N 196 ILE CA HA sing N N 197 ILE C O doub N N 198 ILE C OXT sing N N 199 ILE CB CG1 sing N N 200 ILE CB CG2 sing N N 201 ILE CB HB sing N N 202 ILE CG1 CD1 sing N N 203 ILE CG1 HG12 sing N N 204 ILE CG1 HG13 sing N N 205 ILE CG2 HG21 sing N N 206 ILE CG2 HG22 sing N N 207 ILE CG2 HG23 sing N N 208 ILE CD1 HD11 sing N N 209 ILE CD1 HD12 sing N N 210 ILE CD1 HD13 sing N N 211 ILE OXT HXT sing N N 212 LEU N CA sing N N 213 LEU N H sing N N 214 LEU N H2 sing N N 215 LEU CA C sing N N 216 LEU CA CB sing N N 217 LEU CA HA sing N N 218 LEU C O doub N N 219 LEU C OXT sing N N 220 LEU CB CG sing N N 221 LEU CB HB2 sing N N 222 LEU CB HB3 sing N N 223 LEU CG CD1 sing N N 224 LEU CG CD2 sing N N 225 LEU CG HG sing N N 226 LEU CD1 HD11 sing N N 227 LEU CD1 HD12 sing N N 228 LEU CD1 HD13 sing N N 229 LEU CD2 HD21 sing N N 230 LEU CD2 HD22 sing N N 231 LEU CD2 HD23 sing N N 232 LEU OXT HXT sing N N 233 LYS N CA sing N N 234 LYS N H sing N N 235 LYS N H2 sing N N 236 LYS CA C sing N N 237 LYS CA CB sing N N 238 LYS CA HA sing N N 239 LYS C O doub N N 240 LYS C OXT sing N N 241 LYS CB CG sing N N 242 LYS CB HB2 sing N N 243 LYS CB HB3 sing N N 244 LYS CG CD sing N N 245 LYS CG HG2 sing N N 246 LYS CG HG3 sing N N 247 LYS CD CE sing N N 248 LYS CD HD2 sing N N 249 LYS CD HD3 sing N N 250 LYS CE NZ sing N N 251 LYS CE HE2 sing N N 252 LYS CE HE3 sing N N 253 LYS NZ HZ1 sing N N 254 LYS NZ HZ2 sing N N 255 LYS NZ HZ3 sing N N 256 LYS OXT HXT sing N N 257 MET N CA sing N N 258 MET N H sing N N 259 MET N H2 sing N N 260 MET CA C sing N N 261 MET CA CB sing N N 262 MET CA HA sing N N 263 MET C O doub N N 264 MET C OXT sing N N 265 MET CB CG sing N N 266 MET CB HB2 sing N N 267 MET CB HB3 sing N N 268 MET CG SD sing N N 269 MET CG HG2 sing N N 270 MET CG HG3 sing N N 271 MET SD CE sing N N 272 MET CE HE1 sing N N 273 MET CE HE2 sing N N 274 MET CE HE3 sing N N 275 MET OXT HXT sing N N 276 PHE N CA sing N N 277 PHE N H sing N N 278 PHE N H2 sing N N 279 PHE CA C sing N N 280 PHE CA CB sing N N 281 PHE CA HA sing N N 282 PHE C O doub N N 283 PHE C OXT sing N N 284 PHE CB CG sing N N 285 PHE CB HB2 sing N N 286 PHE CB HB3 sing N N 287 PHE CG CD1 doub Y N 288 PHE CG CD2 sing Y N 289 PHE CD1 CE1 sing Y N 290 PHE CD1 HD1 sing N N 291 PHE CD2 CE2 doub Y N 292 PHE CD2 HD2 sing N N 293 PHE CE1 CZ doub Y N 294 PHE CE1 HE1 sing N N 295 PHE CE2 CZ sing Y N 296 PHE CE2 HE2 sing N N 297 PHE CZ HZ sing N N 298 PHE OXT HXT sing N N 299 PRO N CA sing N N 300 PRO N CD sing N N 301 PRO N H sing N N 302 PRO CA C sing N N 303 PRO CA CB sing N N 304 PRO CA HA sing N N 305 PRO C O doub N N 306 PRO C OXT sing N N 307 PRO CB CG sing N N 308 PRO CB HB2 sing N N 309 PRO CB HB3 sing N N 310 PRO CG CD sing N N 311 PRO CG HG2 sing N N 312 PRO CG HG3 sing N N 313 PRO CD HD2 sing N N 314 PRO CD HD3 sing N N 315 PRO OXT HXT sing N N 316 SER N CA sing N N 317 SER N H sing N N 318 SER N H2 sing N N 319 SER CA C sing N N 320 SER CA CB sing N N 321 SER CA HA sing N N 322 SER C O doub N N 323 SER C OXT sing N N 324 SER CB OG sing N N 325 SER CB HB2 sing N N 326 SER CB HB3 sing N N 327 SER OG HG sing N N 328 SER OXT HXT sing N N 329 THR N CA sing N N 330 THR N H sing N N 331 THR N H2 sing N N 332 THR CA C sing N N 333 THR CA CB sing N N 334 THR CA HA sing N N 335 THR C O doub N N 336 THR C OXT sing N N 337 THR CB OG1 sing N N 338 THR CB CG2 sing N N 339 THR CB HB sing N N 340 THR OG1 HG1 sing N N 341 THR CG2 HG21 sing N N 342 THR CG2 HG22 sing N N 343 THR CG2 HG23 sing N N 344 THR OXT HXT sing N N 345 TRP N CA sing N N 346 TRP N H sing N N 347 TRP N H2 sing N N 348 TRP CA C sing N N 349 TRP CA CB sing N N 350 TRP CA HA sing N N 351 TRP C O doub N N 352 TRP C OXT sing N N 353 TRP CB CG sing N N 354 TRP CB HB2 sing N N 355 TRP CB HB3 sing N N 356 TRP CG CD1 doub Y N 357 TRP CG CD2 sing Y N 358 TRP CD1 NE1 sing Y N 359 TRP CD1 HD1 sing N N 360 TRP CD2 CE2 doub Y N 361 TRP CD2 CE3 sing Y N 362 TRP NE1 CE2 sing Y N 363 TRP NE1 HE1 sing N N 364 TRP CE2 CZ2 sing Y N 365 TRP CE3 CZ3 doub Y N 366 TRP CE3 HE3 sing N N 367 TRP CZ2 CH2 doub Y N 368 TRP CZ2 HZ2 sing N N 369 TRP CZ3 CH2 sing Y N 370 TRP CZ3 HZ3 sing N N 371 TRP CH2 HH2 sing N N 372 TRP OXT HXT sing N N 373 TYR N CA sing N N 374 TYR N H sing N N 375 TYR N H2 sing N N 376 TYR CA C sing N N 377 TYR CA CB sing N N 378 TYR CA HA sing N N 379 TYR C O doub N N 380 TYR C OXT sing N N 381 TYR CB CG sing N N 382 TYR CB HB2 sing N N 383 TYR CB HB3 sing N N 384 TYR CG CD1 doub Y N 385 TYR CG CD2 sing Y N 386 TYR CD1 CE1 sing Y N 387 TYR CD1 HD1 sing N N 388 TYR CD2 CE2 doub Y N 389 TYR CD2 HD2 sing N N 390 TYR CE1 CZ doub Y N 391 TYR CE1 HE1 sing N N 392 TYR CE2 CZ sing Y N 393 TYR CE2 HE2 sing N N 394 TYR CZ OH sing N N 395 TYR OH HH sing N N 396 TYR OXT HXT sing N N 397 VAL N CA sing N N 398 VAL N H sing N N 399 VAL N H2 sing N N 400 VAL CA C sing N N 401 VAL CA CB sing N N 402 VAL CA HA sing N N 403 VAL C O doub N N 404 VAL C OXT sing N N 405 VAL CB CG1 sing N N 406 VAL CB CG2 sing N N 407 VAL CB HB sing N N 408 VAL CG1 HG11 sing N N 409 VAL CG1 HG12 sing N N 410 VAL CG1 HG13 sing N N 411 VAL CG2 HG21 sing N N 412 VAL CG2 HG22 sing N N 413 VAL CG2 HG23 sing N N 414 VAL OXT HXT sing N N 415 YYJ C1 C2 sing N N 416 YYJ C1 O1 sing N N 417 YYJ C1 H11 sing N N 418 YYJ C1 H12 sing N N 419 YYJ C2 C3 sing N N 420 YYJ C2 O2 sing N N 421 YYJ C2 O5 sing N N 422 YYJ C3 C4 sing N N 423 YYJ C3 O3 sing N N 424 YYJ C3 H3 sing N N 425 YYJ C4 C5 sing N N 426 YYJ C4 O4 sing N N 427 YYJ C4 H4 sing N N 428 YYJ C5 C6 sing N N 429 YYJ C5 O5 sing N N 430 YYJ C5 H5 sing N N 431 YYJ C6 O6 sing N N 432 YYJ C6 H61 sing N N 433 YYJ C6 H62 sing N N 434 YYJ O1 S1 sing N N 435 YYJ O1S1 S1 sing N N 436 YYJ O1S1 H1S1 sing N N 437 YYJ O1S3 H1S3 sing N N 438 YYJ O1S3 S3 sing N N 439 YYJ O1S4 S4 sing N N 440 YYJ O1S4 H1S4 sing N N 441 YYJ O1S6 H1S6 sing N N 442 YYJ O1S6 S6 sing N N 443 YYJ O2 HO2 sing N N 444 YYJ O2S1 S1 doub N N 445 YYJ O2S3 S3 doub N N 446 YYJ O2S4 S4 doub N N 447 YYJ O2S6 S6 doub N N 448 YYJ O3 S3 sing N N 449 YYJ O3S1 S1 doub N N 450 YYJ O3S3 S3 doub N N 451 YYJ O3S4 S4 doub N N 452 YYJ O3S6 S6 doub N N 453 YYJ O4 S4 sing N N 454 YYJ O6 S6 sing N N 455 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 GU4 1 B GU4 1 ? SCR 1 n B 2 YYJ 2 B YYJ 2 ? SCR 1 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier GU4 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 'DGlcp[2S,3S,4S,6S]a' GU4 'COMMON NAME' GMML 1.0 2-sulfo-3-sulfo-4-sulfo-6-sulfo-a-D-glucopyranose GU4 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Glcp2SO33SO34SO36SO3 # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 ;WURCS=2.0/2,2,1/[ha122h-2b_2-5_1*OSO/3=O/3=O_3*OSO/3=O/3=O_4*OSO/3=O/3=O_6*OSO/3=O/3=O][a2122h-1a_1-5_2*OSO/3=O/3=O_3*OSO/3=O/3=O_4*OSO/3=O/3=O_6*OSO/3=O/3=O]/1-2/a2-b1 ; WURCS PDB2Glycan 1.1.0 2 2 '[][b-D-Fruf1SO33SO34SO36SO3]{[(2+1)][a-D-Glcp2SO33SO34SO36SO3]{}}' LINUCS PDB-CARE ? # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 1 _pdbx_entity_branch_link.comp_id_1 GU4 _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.entity_branch_list_num_2 2 _pdbx_entity_branch_link.comp_id_2 YYJ _pdbx_entity_branch_link.atom_id_2 O2 _pdbx_entity_branch_link.leaving_atom_id_2 HO2 _pdbx_entity_branch_link.value_order sing _pdbx_entity_branch_link.details ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 GU4 1 n 2 YYJ 2 n # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2P23 _pdbx_initial_refinement_model.details 'PDB ENTRY 2P23' #