data_2P4P # _entry.id 2P4P # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.286 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2P4P RCSB RCSB041962 WWPDB D_1000041962 # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id APC86433.2 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 2P4P _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2007-03-12 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Cuff, M.E.' 1 'Volkart, L.' 2 'Moy, S.' 3 'Joachimiak, A.' 4 'Midwest Center for Structural Genomics (MCSG)' 5 # _citation.id primary _citation.title 'The structure of a CorC_HlyC domain from Haemophilus ducreyi' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Cuff, M.E.' 1 primary 'Volkart, L.' 2 primary 'Moy, S.' 3 primary 'Joachimiak, A.' 4 # _cell.entry_id 2P4P _cell.length_a 29.552 _cell.length_b 58.667 _cell.length_c 87.434 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2P4P _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Hypothetical protein HD1797' 10803.543 2 ? ? 'CorC_HlyC domain, residues 347-429' ? 2 non-polymer syn 'CALCIUM ION' 40.078 1 ? ? ? ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 4 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 5 water nat water 18.015 98 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;SNA(MSE)RRNEDSWLIDGATPLEDV(MSE)RALNIHTFPRDENYETIGGF(MSE)(MSE)Y(MSE)LR(MLY)IP (MLY)(MLY)TDFVLYD(MLY)Y(MLY)FEIIDTENFRIDQL(MSE)VSFR(MLY)DV ; _entity_poly.pdbx_seq_one_letter_code_can ;SNAMRRNEDSWLIDGATPLEDVMRALNIHTFPRDENYETIGGFMMYMLRKIPKKTDFVLYDKYKFEIIDTENFRIDQLMV SFRKDV ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier APC86433.2 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 ASN n 1 3 ALA n 1 4 MSE n 1 5 ARG n 1 6 ARG n 1 7 ASN n 1 8 GLU n 1 9 ASP n 1 10 SER n 1 11 TRP n 1 12 LEU n 1 13 ILE n 1 14 ASP n 1 15 GLY n 1 16 ALA n 1 17 THR n 1 18 PRO n 1 19 LEU n 1 20 GLU n 1 21 ASP n 1 22 VAL n 1 23 MSE n 1 24 ARG n 1 25 ALA n 1 26 LEU n 1 27 ASN n 1 28 ILE n 1 29 HIS n 1 30 THR n 1 31 PHE n 1 32 PRO n 1 33 ARG n 1 34 ASP n 1 35 GLU n 1 36 ASN n 1 37 TYR n 1 38 GLU n 1 39 THR n 1 40 ILE n 1 41 GLY n 1 42 GLY n 1 43 PHE n 1 44 MSE n 1 45 MSE n 1 46 TYR n 1 47 MSE n 1 48 LEU n 1 49 ARG n 1 50 MLY n 1 51 ILE n 1 52 PRO n 1 53 MLY n 1 54 MLY n 1 55 THR n 1 56 ASP n 1 57 PHE n 1 58 VAL n 1 59 LEU n 1 60 TYR n 1 61 ASP n 1 62 MLY n 1 63 TYR n 1 64 MLY n 1 65 PHE n 1 66 GLU n 1 67 ILE n 1 68 ILE n 1 69 ASP n 1 70 THR n 1 71 GLU n 1 72 ASN n 1 73 PHE n 1 74 ARG n 1 75 ILE n 1 76 ASP n 1 77 GLN n 1 78 LEU n 1 79 MSE n 1 80 VAL n 1 81 SER n 1 82 PHE n 1 83 ARG n 1 84 MLY n 1 85 ASP n 1 86 VAL n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Haemophilus _entity_src_gen.pdbx_gene_src_gene 'TlyC, HD_1797' _entity_src_gen.gene_src_species 'Haemophilus ducreyi' _entity_src_gen.gene_src_strain 35000HP _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Haemophilus ducreyi' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 233412 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc 700724 _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pMCSG7 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q7VKS4_HAEDU _struct_ref.pdbx_db_accession Q7VKS4 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MRRNEDSWLIDGATPLEDVMRALNIHTFPRDENYETIGGFMMYMLRKIPKKTDFVLYDKYKFEIIDTENFRIDQLMVSFR KDV ; _struct_ref.pdbx_align_begin 347 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2P4P A 4 ? 86 ? Q7VKS4 347 ? 429 ? 1 83 2 1 2P4P B 4 ? 86 ? Q7VKS4 347 ? 429 ? 1 83 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2P4P SER A 1 ? UNP Q7VKS4 ? ? 'CLONING ARTIFACT' -2 1 1 2P4P ASN A 2 ? UNP Q7VKS4 ? ? 'CLONING ARTIFACT' -1 2 1 2P4P ALA A 3 ? UNP Q7VKS4 ? ? 'CLONING ARTIFACT' 0 3 1 2P4P MSE A 4 ? UNP Q7VKS4 MET 347 'MODIFIED RESIDUE' 1 4 1 2P4P MSE A 23 ? UNP Q7VKS4 MET 366 'MODIFIED RESIDUE' 20 5 1 2P4P MSE A 44 ? UNP Q7VKS4 MET 387 'MODIFIED RESIDUE' 41 6 1 2P4P MSE A 45 ? UNP Q7VKS4 MET 388 'MODIFIED RESIDUE' 42 7 1 2P4P MSE A 47 ? UNP Q7VKS4 MET 390 'MODIFIED RESIDUE' 44 8 1 2P4P MLY A 50 ? UNP Q7VKS4 LYS 393 'MODIFIED RESIDUE' 47 9 1 2P4P MLY A 53 ? UNP Q7VKS4 LYS 396 'MODIFIED RESIDUE' 50 10 1 2P4P MLY A 54 ? UNP Q7VKS4 LYS 397 'MODIFIED RESIDUE' 51 11 1 2P4P MLY A 62 ? UNP Q7VKS4 LYS 405 'MODIFIED RESIDUE' 59 12 1 2P4P MLY A 64 ? UNP Q7VKS4 LYS 407 'MODIFIED RESIDUE' 61 13 1 2P4P MSE A 79 ? UNP Q7VKS4 MET 422 'MODIFIED RESIDUE' 76 14 1 2P4P MLY A 84 ? UNP Q7VKS4 LYS 427 'MODIFIED RESIDUE' 81 15 2 2P4P SER B 1 ? UNP Q7VKS4 ? ? 'CLONING ARTIFACT' -2 16 2 2P4P ASN B 2 ? UNP Q7VKS4 ? ? 'CLONING ARTIFACT' -1 17 2 2P4P ALA B 3 ? UNP Q7VKS4 ? ? 'CLONING ARTIFACT' 0 18 2 2P4P MSE B 4 ? UNP Q7VKS4 MET 347 'MODIFIED RESIDUE' 1 19 2 2P4P MSE B 23 ? UNP Q7VKS4 MET 366 'MODIFIED RESIDUE' 20 20 2 2P4P MSE B 44 ? UNP Q7VKS4 MET 387 'MODIFIED RESIDUE' 41 21 2 2P4P MSE B 45 ? UNP Q7VKS4 MET 388 'MODIFIED RESIDUE' 42 22 2 2P4P MSE B 47 ? UNP Q7VKS4 MET 390 'MODIFIED RESIDUE' 44 23 2 2P4P MLY B 50 ? UNP Q7VKS4 LYS 393 'MODIFIED RESIDUE' 47 24 2 2P4P MLY B 53 ? UNP Q7VKS4 LYS 396 'MODIFIED RESIDUE' 50 25 2 2P4P MLY B 54 ? UNP Q7VKS4 LYS 397 'MODIFIED RESIDUE' 51 26 2 2P4P MLY B 62 ? UNP Q7VKS4 LYS 405 'MODIFIED RESIDUE' 59 27 2 2P4P MLY B 64 ? UNP Q7VKS4 LYS 407 'MODIFIED RESIDUE' 61 28 2 2P4P MSE B 79 ? UNP Q7VKS4 MET 422 'MODIFIED RESIDUE' 76 29 2 2P4P MLY B 84 ? UNP Q7VKS4 LYS 427 'MODIFIED RESIDUE' 81 30 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 MLY 'L-peptide linking' n N-DIMETHYL-LYSINE ? 'C8 H18 N2 O2' 174.241 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2P4P _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.75 _exptl_crystal.density_percent_sol 29.85 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details '0.05M Calcium chloride, 0.1M Bis-Tris pH 6.5, 30% PEG MME 550, VAPOR DIFFUSION, SITTING DROP, temperature 291K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _diffrn.id _diffrn.ambient_temp _diffrn.ambient_temp_details _diffrn.crystal_id 1 100 ? 1 2 ? ? 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2006-08-24 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'SAGITALLY FOCUSED Si(111)' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.97932 1.0 2 0.97943 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list '0.97932, 0.97943' # _reflns.entry_id 2P4P _reflns.observed_criterion_sigma_I -3 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.000 _reflns.d_resolution_high 1.800 _reflns.number_obs 13730 _reflns.number_all 13730 _reflns.percent_possible_obs 92.900 _reflns.pdbx_Rmerge_I_obs 0.1 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 8.400 _reflns.B_iso_Wilson_estimate 23.00 _reflns.pdbx_redundancy 6.100 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.percent_possible_all _reflns_shell.Rmerge_I_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_unique_obs _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.80 1.86 61.90 0.315 ? ? 4.00 ? ? ? ? ? ? 1 1 1.86 1.94 77.70 0.271 ? ? 4.60 ? ? ? ? ? ? 2 1 1.94 2.03 91.20 0.231 ? ? 5.20 ? ? ? ? ? ? 3 1 2.03 2.13 98.10 0.204 ? ? 6.00 ? ? ? ? ? ? 4 1 2.13 2.27 99.90 0.183 ? ? 6.60 ? ? ? ? ? ? 5 1 2.27 2.44 100.00 0.149 ? ? 6.90 ? ? ? ? ? ? 6 1 2.44 2.69 100.00 0.129 ? ? 6.90 ? ? ? ? ? ? 7 1 2.69 3.08 100.00 0.109 ? ? 6.80 ? ? ? ? ? ? 8 1 3.08 3.88 99.90 0.084 ? ? 6.60 ? ? ? ? ? ? 9 1 3.88 50.00 98.60 0.083 ? ? 5.90 ? ? ? ? ? ? 10 1 # _refine.entry_id 2P4P _refine.ls_number_reflns_obs 13684 _refine.ls_number_reflns_all 13684 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 48.74 _refine.ls_d_res_high 1.80 _refine.ls_percent_reflns_obs 92.87 _refine.ls_R_factor_obs 0.21054 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.20793 _refine.ls_R_factor_R_free 0.26189 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 685 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.944 _refine.correlation_coeff_Fo_to_Fc_free 0.929 _refine.B_iso_mean 28.758 _refine.aniso_B[1][1] -2.43 _refine.aniso_B[2][2] 3.34 _refine.aniso_B[3][3] -0.91 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.184 _refine.pdbx_overall_ESU_R_Free 0.169 _refine.overall_SU_ML 0.117 _refine.overall_SU_B 7.547 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1388 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 8 _refine_hist.number_atoms_solvent 98 _refine_hist.number_atoms_total 1494 _refine_hist.d_res_high 1.80 _refine_hist.d_res_low 48.74 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.013 0.022 ? 1461 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.552 2.012 ? 1972 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.077 5.000 ? 169 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 37.181 23.421 ? 76 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 15.378 15.000 ? 229 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 16.831 15.000 ? 13 'X-RAY DIFFRACTION' ? r_chiral_restr 0.110 0.200 ? 216 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.006 0.020 ? 1089 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.221 0.200 ? 654 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.315 0.200 ? 1044 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.185 0.200 ? 107 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.185 0.200 ? 93 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.184 0.200 ? 23 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.246 1.500 ? 844 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.425 2.000 ? 1349 'X-RAY DIFFRACTION' ? r_scbond_it 2.807 3.000 ? 687 'X-RAY DIFFRACTION' ? r_scangle_it 3.818 4.500 ? 620 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.800 _refine_ls_shell.d_res_low 1.847 _refine_ls_shell.number_reflns_R_work 608 _refine_ls_shell.R_factor_R_work 0.218 _refine_ls_shell.percent_reflns_obs 59.58 _refine_ls_shell.R_factor_R_free 0.290 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 42 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2P4P _struct.title 'Crystal structure of a CorC_HlyC domain from Haemophilus ducreyi' _struct.pdbx_descriptor 'Hypothetical protein HD1797' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2P4P _struct_keywords.pdbx_keywords 'STRUCTURAL GENOMICS, UNKNOWN FUNCTION' _struct_keywords.text ;Haemophilus ducreyi, CorC_HlyC, PFAM: PF03471, Structural Genomics, PSI-2, Protein Structure Initiative, Midwest Center for Structural Genomics, MCSG, UNKNOWN FUNCTION ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 5 ? G N N 5 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 18 ? LEU A 26 ? PRO A 15 LEU A 23 1 ? 9 HELX_P HELX_P2 2 THR A 39 ? ARG A 49 ? THR A 36 ARG A 46 1 ? 11 HELX_P HELX_P3 3 PRO B 18 ? LEU B 26 ? PRO B 15 LEU B 23 1 ? 9 HELX_P HELX_P4 4 THR B 39 ? ARG B 49 ? THR B 36 ARG B 46 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc1 metalc ? ? B ASP 69 OD1 ? ? ? 1_555 D MG . MG ? ? B ASP 66 B MG 301 1_555 ? ? ? ? ? ? ? 2.186 ? metalc2 metalc ? ? B THR 70 O ? ? ? 1_555 D MG . MG ? ? B THR 67 B MG 301 1_555 ? ? ? ? ? ? ? 2.439 ? metalc3 metalc ? ? B GLU 71 OE1 ? ? ? 1_555 D MG . MG ? ? B GLU 68 B MG 301 1_555 ? ? ? ? ? ? ? 2.056 ? covale1 covale ? ? A ALA 3 C ? ? ? 1_555 A MSE 4 N ? ? A ALA 0 A MSE 1 1_555 ? ? ? ? ? ? ? 1.329 ? covale2 covale ? ? A MSE 4 C ? ? ? 1_555 A ARG 5 N ? ? A MSE 1 A ARG 2 1_555 ? ? ? ? ? ? ? 1.326 ? covale3 covale ? ? A VAL 22 C ? ? ? 1_555 A MSE 23 N ? ? A VAL 19 A MSE 20 1_555 ? ? ? ? ? ? ? 1.329 ? covale4 covale ? ? A MSE 23 C ? ? ? 1_555 A ARG 24 N ? ? A MSE 20 A ARG 21 1_555 ? ? ? ? ? ? ? 1.338 ? covale5 covale ? ? A PHE 43 C ? ? ? 1_555 A MSE 44 N ? ? A PHE 40 A MSE 41 1_555 ? ? ? ? ? ? ? 1.336 ? covale6 covale ? ? A MSE 44 C ? ? ? 1_555 A MSE 45 N ? ? A MSE 41 A MSE 42 1_555 ? ? ? ? ? ? ? 1.333 ? covale7 covale ? ? A MSE 45 C ? ? ? 1_555 A TYR 46 N ? ? A MSE 42 A TYR 43 1_555 ? ? ? ? ? ? ? 1.327 ? covale8 covale ? ? A TYR 46 C ? ? ? 1_555 A MSE 47 N ? ? A TYR 43 A MSE 44 1_555 ? ? ? ? ? ? ? 1.329 ? covale9 covale ? ? A MSE 47 C ? ? ? 1_555 A LEU 48 N ? ? A MSE 44 A LEU 45 1_555 ? ? ? ? ? ? ? 1.325 ? covale10 covale ? ? A ARG 49 C ? ? ? 1_555 A MLY 50 N ? ? A ARG 46 A MLY 47 1_555 ? ? ? ? ? ? ? 1.333 ? covale11 covale ? ? A MLY 50 C ? ? ? 1_555 A ILE 51 N ? ? A MLY 47 A ILE 48 1_555 ? ? ? ? ? ? ? 1.327 ? covale12 covale ? ? A PRO 52 C ? ? ? 1_555 A MLY 53 N ? ? A PRO 49 A MLY 50 1_555 ? ? ? ? ? ? ? 1.323 ? covale13 covale ? ? A MLY 53 C ? ? ? 1_555 A MLY 54 N ? ? A MLY 50 A MLY 51 1_555 ? ? ? ? ? ? ? 1.335 ? covale14 covale ? ? A MLY 54 C ? ? ? 1_555 A THR 55 N ? ? A MLY 51 A THR 52 1_555 ? ? ? ? ? ? ? 1.335 ? covale15 covale ? ? A ASP 61 C ? ? ? 1_555 A MLY 62 N ? ? A ASP 58 A MLY 59 1_555 ? ? ? ? ? ? ? 1.333 ? covale16 covale ? ? A MLY 62 C ? ? ? 1_555 A TYR 63 N ? ? A MLY 59 A TYR 60 1_555 ? ? ? ? ? ? ? 1.332 ? covale17 covale ? ? A TYR 63 C ? ? ? 1_555 A MLY 64 N ? ? A TYR 60 A MLY 61 1_555 ? ? ? ? ? ? ? 1.341 ? covale18 covale ? ? A MLY 64 C ? ? ? 1_555 A PHE 65 N ? ? A MLY 61 A PHE 62 1_555 ? ? ? ? ? ? ? 1.327 ? covale19 covale ? ? A LEU 78 C ? ? ? 1_555 A MSE 79 N ? ? A LEU 75 A MSE 76 1_555 ? ? ? ? ? ? ? 1.320 ? covale20 covale ? ? A MSE 79 C ? ? ? 1_555 A VAL 80 N ? ? A MSE 76 A VAL 77 1_555 ? ? ? ? ? ? ? 1.330 ? covale21 covale ? ? A ARG 83 C ? ? ? 1_555 A MLY 84 N ? ? A ARG 80 A MLY 81 1_555 ? ? ? ? ? ? ? 1.329 ? covale22 covale ? ? A MLY 84 C ? ? ? 1_555 A ASP 85 N ? ? A MLY 81 A ASP 82 1_555 ? ? ? ? ? ? ? 1.328 ? covale23 covale ? ? B VAL 22 C ? ? ? 1_555 B MSE 23 N ? ? B VAL 19 B MSE 20 1_555 ? ? ? ? ? ? ? 1.332 ? covale24 covale ? ? B MSE 23 C ? ? ? 1_555 B ARG 24 N ? ? B MSE 20 B ARG 21 1_555 ? ? ? ? ? ? ? 1.340 ? covale25 covale ? ? B PHE 43 C ? ? ? 1_555 B MSE 44 N ? ? B PHE 40 B MSE 41 1_555 ? ? ? ? ? ? ? 1.319 ? covale26 covale ? ? B MSE 44 C ? ? ? 1_555 B MSE 45 N B ? B MSE 41 B MSE 42 1_555 ? ? ? ? ? ? ? 1.328 ? covale27 covale ? ? B MSE 44 C ? ? ? 1_555 B MSE 45 N A ? B MSE 41 B MSE 42 1_555 ? ? ? ? ? ? ? 1.325 ? covale28 covale ? ? B MSE 45 C B ? ? 1_555 B TYR 46 N ? ? B MSE 42 B TYR 43 1_555 ? ? ? ? ? ? ? 1.329 ? covale29 covale ? ? B MSE 45 C A ? ? 1_555 B TYR 46 N ? ? B MSE 42 B TYR 43 1_555 ? ? ? ? ? ? ? 1.331 ? covale30 covale ? ? B TYR 46 C ? ? ? 1_555 B MSE 47 N ? ? B TYR 43 B MSE 44 1_555 ? ? ? ? ? ? ? 1.340 ? covale31 covale ? ? B MSE 47 C ? ? ? 1_555 B LEU 48 N ? ? B MSE 44 B LEU 45 1_555 ? ? ? ? ? ? ? 1.331 ? covale32 covale ? ? B ARG 49 C ? ? ? 1_555 B MLY 50 N ? ? B ARG 46 B MLY 47 1_555 ? ? ? ? ? ? ? 1.334 ? covale33 covale ? ? B MLY 50 C ? ? ? 1_555 B ILE 51 N ? ? B MLY 47 B ILE 48 1_555 ? ? ? ? ? ? ? 1.331 ? covale34 covale ? ? B PRO 52 C ? ? ? 1_555 B MLY 53 N ? ? B PRO 49 B MLY 50 1_555 ? ? ? ? ? ? ? 1.327 ? covale35 covale ? ? B MLY 53 C ? ? ? 1_555 B MLY 54 N ? ? B MLY 50 B MLY 51 1_555 ? ? ? ? ? ? ? 1.333 ? covale36 covale ? ? B MLY 54 C ? ? ? 1_555 B THR 55 N ? ? B MLY 51 B THR 52 1_555 ? ? ? ? ? ? ? 1.334 ? covale37 covale ? ? B ASP 61 C ? ? ? 1_555 B MLY 62 N ? ? B ASP 58 B MLY 59 1_555 ? ? ? ? ? ? ? 1.333 ? covale38 covale ? ? B MLY 62 C ? ? ? 1_555 B TYR 63 N ? ? B MLY 59 B TYR 60 1_555 ? ? ? ? ? ? ? 1.330 ? covale39 covale ? ? B TYR 63 C ? ? ? 1_555 B MLY 64 N ? ? B TYR 60 B MLY 61 1_555 ? ? ? ? ? ? ? 1.334 ? covale40 covale ? ? B MLY 64 C ? ? ? 1_555 B PHE 65 N ? ? B MLY 61 B PHE 62 1_555 ? ? ? ? ? ? ? 1.326 ? covale41 covale ? ? B LEU 78 C ? ? ? 1_555 B MSE 79 N ? ? B LEU 75 B MSE 76 1_555 ? ? ? ? ? ? ? 1.327 ? covale42 covale ? ? B MSE 79 C ? ? ? 1_555 B VAL 80 N ? ? B MSE 76 B VAL 77 1_555 ? ? ? ? ? ? ? 1.326 ? covale43 covale ? ? B ARG 83 C ? ? ? 1_555 B MLY 84 N ? ? B ARG 80 B MLY 81 1_555 ? ? ? ? ? ? ? 1.333 ? covale44 covale ? ? B MLY 84 C ? ? ? 1_555 B ASP 85 N ? ? B MLY 81 B ASP 82 1_555 ? ? ? ? ? ? ? 1.330 ? metalc4 metalc ? ? D MG . MG ? ? ? 1_555 F HOH . O ? ? B MG 301 A HOH 252 1_555 ? ? ? ? ? ? ? 2.841 ? metalc5 metalc ? ? D MG . MG ? ? ? 1_555 G HOH . O ? ? B MG 301 B HOH 448 1_555 ? ? ? ? ? ? ? 3.134 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? covale ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 SER A 10 ? ASP A 14 ? SER A 7 ASP A 11 A 2 ARG A 74 ? PHE A 82 ? ARG A 71 PHE A 79 A 3 TYR A 63 ? GLU A 71 ? TYR A 60 GLU A 68 A 4 PHE A 57 ? TYR A 60 ? PHE A 54 TYR A 57 B 1 SER B 10 ? ASP B 14 ? SER B 7 ASP B 11 B 2 ARG B 74 ? PHE B 82 ? ARG B 71 PHE B 79 B 3 TYR B 63 ? GLU B 71 ? TYR B 60 GLU B 68 B 4 PHE B 57 ? TYR B 60 ? PHE B 54 TYR B 57 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE A 13 ? N ILE A 10 O LEU A 78 ? O LEU A 75 A 2 3 O GLN A 77 ? O GLN A 74 N ILE A 68 ? N ILE A 65 A 3 4 O PHE A 65 ? O PHE A 62 N VAL A 58 ? N VAL A 55 B 1 2 N TRP B 11 ? N TRP B 8 O VAL B 80 ? O VAL B 77 B 2 3 O SER B 81 ? O SER B 78 N MLY B 64 ? N MLY B 61 B 3 4 O TYR B 63 ? O TYR B 60 N TYR B 60 ? N TYR B 57 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE MG B 301' AC2 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE GOL B 401' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 HOH F . ? HOH A 252 . ? 1_555 ? 2 AC1 4 ASP B 69 ? ASP B 66 . ? 1_555 ? 3 AC1 4 THR B 70 ? THR B 67 . ? 1_555 ? 4 AC1 4 GLU B 71 ? GLU B 68 . ? 1_555 ? 5 AC2 6 MSE B 45 ? MSE B 42 . ? 1_655 ? 6 AC2 6 TYR B 46 ? TYR B 43 . ? 1_655 ? 7 AC2 6 ARG B 49 ? ARG B 46 . ? 1_655 ? 8 AC2 6 MLY B 62 ? MLY B 59 . ? 1_555 ? 9 AC2 6 HOH G . ? HOH B 425 . ? 1_655 ? 10 AC2 6 HOH G . ? HOH B 438 . ? 1_655 ? # _atom_sites.entry_id 2P4P _atom_sites.fract_transf_matrix[1][1] 0.033839 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017045 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011437 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA MG N O SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 -2 ? ? ? A . n A 1 2 ASN 2 -1 -1 ASN ASN A . n A 1 3 ALA 3 0 0 ALA ALA A . n A 1 4 MSE 4 1 1 MSE MSE A . n A 1 5 ARG 5 2 2 ARG ARG A . n A 1 6 ARG 6 3 3 ARG ARG A . n A 1 7 ASN 7 4 4 ASN ASN A . n A 1 8 GLU 8 5 5 GLU GLU A . n A 1 9 ASP 9 6 6 ASP ASP A . n A 1 10 SER 10 7 7 SER SER A . n A 1 11 TRP 11 8 8 TRP TRP A . n A 1 12 LEU 12 9 9 LEU LEU A . n A 1 13 ILE 13 10 10 ILE ILE A . n A 1 14 ASP 14 11 11 ASP ASP A . n A 1 15 GLY 15 12 12 GLY GLY A . n A 1 16 ALA 16 13 13 ALA ALA A . n A 1 17 THR 17 14 14 THR THR A . n A 1 18 PRO 18 15 15 PRO PRO A . n A 1 19 LEU 19 16 16 LEU LEU A . n A 1 20 GLU 20 17 17 GLU GLU A . n A 1 21 ASP 21 18 18 ASP ASP A . n A 1 22 VAL 22 19 19 VAL VAL A . n A 1 23 MSE 23 20 20 MSE MSE A . n A 1 24 ARG 24 21 21 ARG ARG A . n A 1 25 ALA 25 22 22 ALA ALA A . n A 1 26 LEU 26 23 23 LEU LEU A . n A 1 27 ASN 27 24 24 ASN ASN A . n A 1 28 ILE 28 25 25 ILE ILE A . n A 1 29 HIS 29 26 26 HIS HIS A . n A 1 30 THR 30 27 27 THR THR A . n A 1 31 PHE 31 28 28 PHE PHE A . n A 1 32 PRO 32 29 29 PRO PRO A . n A 1 33 ARG 33 30 30 ARG ARG A . n A 1 34 ASP 34 31 31 ASP ASP A . n A 1 35 GLU 35 32 32 GLU GLU A . n A 1 36 ASN 36 33 33 ASN ASN A . n A 1 37 TYR 37 34 34 TYR TYR A . n A 1 38 GLU 38 35 35 GLU GLU A . n A 1 39 THR 39 36 36 THR THR A . n A 1 40 ILE 40 37 37 ILE ILE A . n A 1 41 GLY 41 38 38 GLY GLY A . n A 1 42 GLY 42 39 39 GLY GLY A . n A 1 43 PHE 43 40 40 PHE PHE A . n A 1 44 MSE 44 41 41 MSE MSE A . n A 1 45 MSE 45 42 42 MSE MSE A . n A 1 46 TYR 46 43 43 TYR TYR A . n A 1 47 MSE 47 44 44 MSE MSE A . n A 1 48 LEU 48 45 45 LEU LEU A . n A 1 49 ARG 49 46 46 ARG ARG A . n A 1 50 MLY 50 47 47 MLY MLY A . n A 1 51 ILE 51 48 48 ILE ILE A . n A 1 52 PRO 52 49 49 PRO PRO A . n A 1 53 MLY 53 50 50 MLY MLY A . n A 1 54 MLY 54 51 51 MLY MLY A . n A 1 55 THR 55 52 52 THR THR A . n A 1 56 ASP 56 53 53 ASP ASP A . n A 1 57 PHE 57 54 54 PHE PHE A . n A 1 58 VAL 58 55 55 VAL VAL A . n A 1 59 LEU 59 56 56 LEU LEU A . n A 1 60 TYR 60 57 57 TYR TYR A . n A 1 61 ASP 61 58 58 ASP ASP A . n A 1 62 MLY 62 59 59 MLY MLY A . n A 1 63 TYR 63 60 60 TYR TYR A . n A 1 64 MLY 64 61 61 MLY MLY A . n A 1 65 PHE 65 62 62 PHE PHE A . n A 1 66 GLU 66 63 63 GLU GLU A . n A 1 67 ILE 67 64 64 ILE ILE A . n A 1 68 ILE 68 65 65 ILE ILE A . n A 1 69 ASP 69 66 66 ASP ASP A . n A 1 70 THR 70 67 67 THR THR A . n A 1 71 GLU 71 68 68 GLU GLU A . n A 1 72 ASN 72 69 69 ASN ASN A . n A 1 73 PHE 73 70 70 PHE PHE A . n A 1 74 ARG 74 71 71 ARG ARG A . n A 1 75 ILE 75 72 72 ILE ILE A . n A 1 76 ASP 76 73 73 ASP ASP A . n A 1 77 GLN 77 74 74 GLN GLN A . n A 1 78 LEU 78 75 75 LEU LEU A . n A 1 79 MSE 79 76 76 MSE MSE A . n A 1 80 VAL 80 77 77 VAL VAL A . n A 1 81 SER 81 78 78 SER SER A . n A 1 82 PHE 82 79 79 PHE PHE A . n A 1 83 ARG 83 80 80 ARG ARG A . n A 1 84 MLY 84 81 81 MLY MLY A . n A 1 85 ASP 85 82 82 ASP ASP A . n A 1 86 VAL 86 83 ? ? ? A . n B 1 1 SER 1 -2 ? ? ? B . n B 1 2 ASN 2 -1 ? ? ? B . n B 1 3 ALA 3 0 ? ? ? B . n B 1 4 MSE 4 1 ? ? ? B . n B 1 5 ARG 5 2 ? ? ? B . n B 1 6 ARG 6 3 ? ? ? B . n B 1 7 ASN 7 4 ? ? ? B . n B 1 8 GLU 8 5 ? ? ? B . n B 1 9 ASP 9 6 6 ASP ASP B . n B 1 10 SER 10 7 7 SER SER B . n B 1 11 TRP 11 8 8 TRP TRP B . n B 1 12 LEU 12 9 9 LEU LEU B . n B 1 13 ILE 13 10 10 ILE ILE B . n B 1 14 ASP 14 11 11 ASP ASP B . n B 1 15 GLY 15 12 12 GLY GLY B . n B 1 16 ALA 16 13 13 ALA ALA B . n B 1 17 THR 17 14 14 THR THR B . n B 1 18 PRO 18 15 15 PRO PRO B . n B 1 19 LEU 19 16 16 LEU LEU B . n B 1 20 GLU 20 17 17 GLU GLU B . n B 1 21 ASP 21 18 18 ASP ASP B . n B 1 22 VAL 22 19 19 VAL VAL B . n B 1 23 MSE 23 20 20 MSE MSE B . n B 1 24 ARG 24 21 21 ARG ARG B . n B 1 25 ALA 25 22 22 ALA ALA B . n B 1 26 LEU 26 23 23 LEU LEU B . n B 1 27 ASN 27 24 24 ASN ASN B . n B 1 28 ILE 28 25 25 ILE ILE B . n B 1 29 HIS 29 26 26 HIS HIS B . n B 1 30 THR 30 27 27 THR THR B . n B 1 31 PHE 31 28 28 PHE PHE B . n B 1 32 PRO 32 29 29 PRO PRO B . n B 1 33 ARG 33 30 30 ARG ARG B . n B 1 34 ASP 34 31 31 ASP ASP B . n B 1 35 GLU 35 32 32 GLU GLU B . n B 1 36 ASN 36 33 33 ASN ASN B . n B 1 37 TYR 37 34 34 TYR TYR B . n B 1 38 GLU 38 35 35 GLU GLU B . n B 1 39 THR 39 36 36 THR THR B . n B 1 40 ILE 40 37 37 ILE ILE B . n B 1 41 GLY 41 38 38 GLY GLY B . n B 1 42 GLY 42 39 39 GLY GLY B . n B 1 43 PHE 43 40 40 PHE PHE B . n B 1 44 MSE 44 41 41 MSE MSE B . n B 1 45 MSE 45 42 42 MSE MSE B . n B 1 46 TYR 46 43 43 TYR TYR B . n B 1 47 MSE 47 44 44 MSE MSE B . n B 1 48 LEU 48 45 45 LEU LEU B . n B 1 49 ARG 49 46 46 ARG ARG B . n B 1 50 MLY 50 47 47 MLY MLY B . n B 1 51 ILE 51 48 48 ILE ILE B . n B 1 52 PRO 52 49 49 PRO PRO B . n B 1 53 MLY 53 50 50 MLY MLY B . n B 1 54 MLY 54 51 51 MLY MLY B . n B 1 55 THR 55 52 52 THR THR B . n B 1 56 ASP 56 53 53 ASP ASP B . n B 1 57 PHE 57 54 54 PHE PHE B . n B 1 58 VAL 58 55 55 VAL VAL B . n B 1 59 LEU 59 56 56 LEU LEU B . n B 1 60 TYR 60 57 57 TYR TYR B . n B 1 61 ASP 61 58 58 ASP ASP B . n B 1 62 MLY 62 59 59 MLY MLY B . n B 1 63 TYR 63 60 60 TYR TYR B . n B 1 64 MLY 64 61 61 MLY MLY B . n B 1 65 PHE 65 62 62 PHE PHE B . n B 1 66 GLU 66 63 63 GLU GLU B . n B 1 67 ILE 67 64 64 ILE ILE B . n B 1 68 ILE 68 65 65 ILE ILE B . n B 1 69 ASP 69 66 66 ASP ASP B . n B 1 70 THR 70 67 67 THR THR B . n B 1 71 GLU 71 68 68 GLU GLU B . n B 1 72 ASN 72 69 69 ASN ASN B . n B 1 73 PHE 73 70 70 PHE PHE B . n B 1 74 ARG 74 71 71 ARG ARG B . n B 1 75 ILE 75 72 72 ILE ILE B . n B 1 76 ASP 76 73 73 ASP ASP B . n B 1 77 GLN 77 74 74 GLN GLN B . n B 1 78 LEU 78 75 75 LEU LEU B . n B 1 79 MSE 79 76 76 MSE MSE B . n B 1 80 VAL 80 77 77 VAL VAL B . n B 1 81 SER 81 78 78 SER SER B . n B 1 82 PHE 82 79 79 PHE PHE B . n B 1 83 ARG 83 80 80 ARG ARG B . n B 1 84 MLY 84 81 81 MLY MLY B . n B 1 85 ASP 85 82 82 ASP ASP B . n B 1 86 VAL 86 83 ? ? ? B . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Midwest Center for Structural Genomics' _pdbx_SG_project.initial_of_center MCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CA 1 201 201 CA CA A . D 3 MG 1 301 301 MG MG B . E 4 GOL 1 401 401 GOL GOL B . F 5 HOH 1 202 2 HOH HOH A . F 5 HOH 2 203 5 HOH HOH A . F 5 HOH 3 204 6 HOH HOH A . F 5 HOH 4 205 7 HOH HOH A . F 5 HOH 5 206 10 HOH HOH A . F 5 HOH 6 207 12 HOH HOH A . F 5 HOH 7 208 13 HOH HOH A . F 5 HOH 8 209 14 HOH HOH A . F 5 HOH 9 210 15 HOH HOH A . F 5 HOH 10 211 17 HOH HOH A . F 5 HOH 11 212 18 HOH HOH A . F 5 HOH 12 213 20 HOH HOH A . F 5 HOH 13 214 22 HOH HOH A . F 5 HOH 14 215 23 HOH HOH A . F 5 HOH 15 216 24 HOH HOH A . F 5 HOH 16 217 25 HOH HOH A . F 5 HOH 17 218 28 HOH HOH A . F 5 HOH 18 219 30 HOH HOH A . F 5 HOH 19 220 32 HOH HOH A . F 5 HOH 20 221 35 HOH HOH A . F 5 HOH 21 222 36 HOH HOH A . F 5 HOH 22 223 40 HOH HOH A . F 5 HOH 23 224 43 HOH HOH A . F 5 HOH 24 225 46 HOH HOH A . F 5 HOH 25 226 47 HOH HOH A . F 5 HOH 26 227 48 HOH HOH A . F 5 HOH 27 228 52 HOH HOH A . F 5 HOH 28 229 53 HOH HOH A . F 5 HOH 29 230 58 HOH HOH A . F 5 HOH 30 231 59 HOH HOH A . F 5 HOH 31 232 64 HOH HOH A . F 5 HOH 32 233 72 HOH HOH A . F 5 HOH 33 234 73 HOH HOH A . F 5 HOH 34 235 74 HOH HOH A . F 5 HOH 35 236 76 HOH HOH A . F 5 HOH 36 237 77 HOH HOH A . F 5 HOH 37 238 78 HOH HOH A . F 5 HOH 38 239 79 HOH HOH A . F 5 HOH 39 240 81 HOH HOH A . F 5 HOH 40 241 83 HOH HOH A . F 5 HOH 41 242 95 HOH HOH A . F 5 HOH 42 243 99 HOH HOH A . F 5 HOH 43 244 101 HOH HOH A . F 5 HOH 44 245 105 HOH HOH A . F 5 HOH 45 246 108 HOH HOH A . F 5 HOH 46 247 110 HOH HOH A . F 5 HOH 47 248 111 HOH HOH A . F 5 HOH 48 249 113 HOH HOH A . F 5 HOH 49 250 115 HOH HOH A . F 5 HOH 50 251 116 HOH HOH A . F 5 HOH 51 252 117 HOH HOH A . G 5 HOH 1 402 1 HOH HOH B . G 5 HOH 2 403 3 HOH HOH B . G 5 HOH 3 404 4 HOH HOH B . G 5 HOH 4 405 8 HOH HOH B . G 5 HOH 5 406 9 HOH HOH B . G 5 HOH 6 407 11 HOH HOH B . G 5 HOH 7 408 16 HOH HOH B . G 5 HOH 8 409 19 HOH HOH B . G 5 HOH 9 410 21 HOH HOH B . G 5 HOH 10 411 26 HOH HOH B . G 5 HOH 11 412 29 HOH HOH B . G 5 HOH 12 413 31 HOH HOH B . G 5 HOH 13 414 33 HOH HOH B . G 5 HOH 14 415 34 HOH HOH B . G 5 HOH 15 416 37 HOH HOH B . G 5 HOH 16 417 39 HOH HOH B . G 5 HOH 17 418 41 HOH HOH B . G 5 HOH 18 419 44 HOH HOH B . G 5 HOH 19 420 45 HOH HOH B . G 5 HOH 20 421 49 HOH HOH B . G 5 HOH 21 422 50 HOH HOH B . G 5 HOH 22 423 51 HOH HOH B . G 5 HOH 23 424 55 HOH HOH B . G 5 HOH 24 425 56 HOH HOH B . G 5 HOH 25 426 57 HOH HOH B . G 5 HOH 26 427 61 HOH HOH B . G 5 HOH 27 428 62 HOH HOH B . G 5 HOH 28 429 63 HOH HOH B . G 5 HOH 29 430 65 HOH HOH B . G 5 HOH 30 431 66 HOH HOH B . G 5 HOH 31 432 67 HOH HOH B . G 5 HOH 32 433 68 HOH HOH B . G 5 HOH 33 434 70 HOH HOH B . G 5 HOH 34 435 71 HOH HOH B . G 5 HOH 35 436 75 HOH HOH B . G 5 HOH 36 437 80 HOH HOH B . G 5 HOH 37 438 82 HOH HOH B . G 5 HOH 38 439 84 HOH HOH B . G 5 HOH 39 440 88 HOH HOH B . G 5 HOH 40 441 89 HOH HOH B . G 5 HOH 41 442 92 HOH HOH B . G 5 HOH 42 443 102 HOH HOH B . G 5 HOH 43 444 103 HOH HOH B . G 5 HOH 44 445 106 HOH HOH B . G 5 HOH 45 446 109 HOH HOH B . G 5 HOH 46 447 112 HOH HOH B . G 5 HOH 47 448 120 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 4 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 23 A MSE 20 ? MET SELENOMETHIONINE 3 A MSE 44 A MSE 41 ? MET SELENOMETHIONINE 4 A MSE 45 A MSE 42 ? MET SELENOMETHIONINE 5 A MSE 47 A MSE 44 ? MET SELENOMETHIONINE 6 A MLY 50 A MLY 47 ? LYS N-DIMETHYL-LYSINE 7 A MLY 53 A MLY 50 ? LYS N-DIMETHYL-LYSINE 8 A MLY 54 A MLY 51 ? LYS N-DIMETHYL-LYSINE 9 A MLY 62 A MLY 59 ? LYS N-DIMETHYL-LYSINE 10 A MLY 64 A MLY 61 ? LYS N-DIMETHYL-LYSINE 11 A MSE 79 A MSE 76 ? MET SELENOMETHIONINE 12 A MLY 84 A MLY 81 ? LYS N-DIMETHYL-LYSINE 13 B MSE 23 B MSE 20 ? MET SELENOMETHIONINE 14 B MSE 44 B MSE 41 ? MET SELENOMETHIONINE 15 B MSE 45 B MSE 42 ? MET SELENOMETHIONINE 16 B MSE 47 B MSE 44 ? MET SELENOMETHIONINE 17 B MLY 50 B MLY 47 ? LYS N-DIMETHYL-LYSINE 18 B MLY 53 B MLY 50 ? LYS N-DIMETHYL-LYSINE 19 B MLY 54 B MLY 51 ? LYS N-DIMETHYL-LYSINE 20 B MLY 62 B MLY 59 ? LYS N-DIMETHYL-LYSINE 21 B MLY 64 B MLY 61 ? LYS N-DIMETHYL-LYSINE 22 B MSE 79 B MSE 76 ? MET SELENOMETHIONINE 23 B MLY 84 B MLY 81 ? LYS N-DIMETHYL-LYSINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1640 ? 1 MORE -27 ? 1 'SSA (A^2)' 10410 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD1 ? B ASP 69 ? B ASP 66 ? 1_555 MG ? D MG . ? B MG 301 ? 1_555 O ? B THR 70 ? B THR 67 ? 1_555 84.5 ? 2 OD1 ? B ASP 69 ? B ASP 66 ? 1_555 MG ? D MG . ? B MG 301 ? 1_555 OE1 ? B GLU 71 ? B GLU 68 ? 1_555 99.8 ? 3 O ? B THR 70 ? B THR 67 ? 1_555 MG ? D MG . ? B MG 301 ? 1_555 OE1 ? B GLU 71 ? B GLU 68 ? 1_555 73.7 ? 4 OD1 ? B ASP 69 ? B ASP 66 ? 1_555 MG ? D MG . ? B MG 301 ? 1_555 O ? F HOH . ? A HOH 252 ? 1_555 78.2 ? 5 O ? B THR 70 ? B THR 67 ? 1_555 MG ? D MG . ? B MG 301 ? 1_555 O ? F HOH . ? A HOH 252 ? 1_555 156.1 ? 6 OE1 ? B GLU 71 ? B GLU 68 ? 1_555 MG ? D MG . ? B MG 301 ? 1_555 O ? F HOH . ? A HOH 252 ? 1_555 125.2 ? 7 OD1 ? B ASP 69 ? B ASP 66 ? 1_555 MG ? D MG . ? B MG 301 ? 1_555 O ? G HOH . ? B HOH 448 ? 1_555 125.6 ? 8 O ? B THR 70 ? B THR 67 ? 1_555 MG ? D MG . ? B MG 301 ? 1_555 O ? G HOH . ? B HOH 448 ? 1_555 129.8 ? 9 OE1 ? B GLU 71 ? B GLU 68 ? 1_555 MG ? D MG . ? B MG 301 ? 1_555 O ? G HOH . ? B HOH 448 ? 1_555 63.1 ? 10 O ? F HOH . ? A HOH 252 ? 1_555 MG ? D MG . ? B MG 301 ? 1_555 O ? G HOH . ? B HOH 448 ? 1_555 74.1 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-05-22 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-18 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Source and taxonomy' 4 3 'Structure model' 'Version format compliance' 5 4 'Structure model' 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 4 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.classification' 2 4 'Structure model' '_software.contact_author' 3 4 'Structure model' '_software.contact_author_email' 4 4 'Structure model' '_software.date' 5 4 'Structure model' '_software.language' 6 4 'Structure model' '_software.location' 7 4 'Structure model' '_software.name' 8 4 'Structure model' '_software.type' 9 4 'Structure model' '_software.version' # loop_ _diffrn_reflns.diffrn_id _diffrn_reflns.pdbx_d_res_high _diffrn_reflns.pdbx_d_res_low _diffrn_reflns.pdbx_number_obs _diffrn_reflns.pdbx_Rmerge_I_obs _diffrn_reflns.pdbx_Rsym_value _diffrn_reflns.pdbx_chi_squared _diffrn_reflns.av_sigmaI_over_netI _diffrn_reflns.pdbx_redundancy _diffrn_reflns.pdbx_percent_possible_obs _diffrn_reflns.number _diffrn_reflns.pdbx_observed_criterion _diffrn_reflns.limit_h_max _diffrn_reflns.limit_h_min _diffrn_reflns.limit_k_max _diffrn_reflns.limit_k_min _diffrn_reflns.limit_l_max _diffrn_reflns.limit_l_min 1 1.800 50.000 13730 0.100 ? 1.96 8.40 6.10 92.90 83418 ? ? ? ? ? ? ? 2 1.800 50.000 12074 0.093 ? 1.63 8.10 5.80 81.00 70218 ? ? ? ? ? ? ? # loop_ _pdbx_diffrn_reflns_shell.diffrn_id _pdbx_diffrn_reflns_shell.d_res_high _pdbx_diffrn_reflns_shell.d_res_low _pdbx_diffrn_reflns_shell.number_obs _pdbx_diffrn_reflns_shell.rejects _pdbx_diffrn_reflns_shell.Rmerge_I_obs _pdbx_diffrn_reflns_shell.Rsym_value _pdbx_diffrn_reflns_shell.chi_squared _pdbx_diffrn_reflns_shell.redundancy _pdbx_diffrn_reflns_shell.percent_possible_obs 1 3.88 50.00 ? ? 0.083 ? 6.283 5.90 98.60 1 3.08 3.88 ? ? 0.084 ? 3.216 6.60 99.90 1 2.69 3.08 ? ? 0.109 ? 2.174 6.80 100.00 1 2.44 2.69 ? ? 0.129 ? 1.372 6.90 100.00 1 2.27 2.44 ? ? 0.149 ? 1.095 6.90 100.00 1 2.13 2.27 ? ? 0.183 ? 0.888 6.60 99.90 1 2.03 2.13 ? ? 0.204 ? 0.788 6.00 98.10 1 1.94 2.03 ? ? 0.231 ? 0.686 5.20 91.20 1 1.86 1.94 ? ? 0.271 ? 0.565 4.60 77.70 1 1.80 1.86 ? ? 0.315 ? 0.488 4.00 61.90 2 3.88 50.00 ? ? 0.077 ? 4.846 6.30 98.80 2 3.08 3.88 ? ? 0.080 ? 2.267 6.80 99.90 2 2.69 3.08 ? ? 0.113 ? 1.305 6.90 100.00 2 2.44 2.69 ? ? 0.161 ? 0.855 6.90 100.00 2 2.27 2.44 ? ? 0.189 ? 0.710 6.20 99.50 2 2.13 2.27 ? ? 0.231 ? 0.633 5.40 93.20 2 2.03 2.13 ? ? 0.246 ? 0.568 4.80 79.10 2 1.94 2.03 ? ? 0.284 ? 0.574 4.10 62.70 2 1.86 1.94 ? ? 0.364 ? 0.469 3.50 44.00 2 1.80 1.86 ? ? 0.478 ? 0.426 3.00 28.60 # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.pdbx_refine_id 1 ? refined 20.6146 51.9254 15.7168 -0.0113 -0.0679 -0.0139 -0.0227 -0.0135 0.0071 2.0647 0.5807 2.0582 -0.3094 -0.0395 -0.3102 -0.0449 0.1909 -0.0673 0.0389 -0.0091 -0.0278 0.0431 -0.1263 0.0540 'X-RAY DIFFRACTION' 2 ? refined 20.1361 63.6471 -6.5424 -0.0295 -0.0662 -0.0192 0.0077 0.0011 -0.0106 2.9660 0.7939 2.9244 0.6088 -0.5122 -0.4103 -0.0459 -0.1379 -0.1193 -0.0541 0.0172 0.0080 -0.0384 -0.0864 0.0287 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 A -1 A 2 A 82 A 85 ? 'X-RAY DIFFRACTION' ? 2 2 B 6 B 9 B 82 B 85 ? 'X-RAY DIFFRACTION' ? # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal DENZO . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data reduction' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 1 SCALEPACK . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data scaling' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 2 REFMAC . ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran_77 ? 3 PDB_EXTRACT 2.000 'April. 3, 2006' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 4 SBC-Collect . ? ? ? ? 'data collection' ? ? ? 5 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 6 autoSHARP . ? ? ? ? phasing ? ? ? 7 HKL-3000 . ? ? ? ? phasing ? ? ? 8 SHELXD . ? ? ? ? phasing ? ? ? 9 SHELXE . ? ? ? ? 'model building' ? ? ? 10 MLPHARE . ? ? ? ? phasing ? ? ? 11 DM . ? ? ? ? phasing ? ? ? 12 SOLVE . ? ? ? ? phasing ? ? ? 13 RESOLVE . ? ? ? ? phasing ? ? ? 14 ARP/wARP . ? ? ? ? 'model building' ? ? ? 15 CCP4 . ? ? ? ? phasing ? ? ? 16 O . ? ? ? ? 'model building' ? ? ? 17 Coot . ? ? ? ? 'model building' ? ? ? 18 # _pdbx_database_remark.id 300 _pdbx_database_remark.text ; BIOMOLECULE: 1 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT WHICH CONSISTS OF 2 CHAIN(S). AUTHORS STATE THAT THE BIOLOGICAL UNIT OF THIS PROTEIN IS UNKNOWN. ; # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 46 ? ? 64.10 -57.38 2 1 THR A 52 ? ? 85.30 -21.29 3 1 ASP A 58 ? ? 53.58 -134.10 4 1 ASP B 31 ? ? -126.32 -151.61 5 1 ARG B 46 ? ? 68.94 -47.83 6 1 MLY B 51 ? ? -39.53 138.54 7 1 THR B 52 ? ? 83.34 -24.76 8 1 ASP B 58 ? ? 49.32 -129.16 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER -2 ? A SER 1 2 1 Y 1 A VAL 83 ? A VAL 86 3 1 Y 1 B SER -2 ? B SER 1 4 1 Y 1 B ASN -1 ? B ASN 2 5 1 Y 1 B ALA 0 ? B ALA 3 6 1 Y 1 B MSE 1 ? B MSE 4 7 1 Y 1 B ARG 2 ? B ARG 5 8 1 Y 1 B ARG 3 ? B ARG 6 9 1 Y 1 B ASN 4 ? B ASN 7 10 1 Y 1 B GLU 5 ? B GLU 8 11 1 Y 1 B VAL 83 ? B VAL 86 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CALCIUM ION' CA 3 'MAGNESIUM ION' MG 4 GLYCEROL GOL 5 water HOH #