data_2P6V # _entry.id 2P6V # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2P6V RCSB RCSB042040 WWPDB D_1000042040 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2P6V _pdbx_database_status.recvd_initial_deposition_date 2007-03-19 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Wang, X.' 1 'Truckses, D.M.' 2 'Takada, S.' 3 'Matsumura, T.' 4 'Tanese, N.' 5 'Jacobson, R.H.' 6 # _citation.id primary _citation.title 'Conserved region I of human coactivator TAF4 binds to a short hydrophobic motif present in transcriptional regulators.' _citation.journal_abbrev Proc.Natl.Acad.Sci.Usa _citation.journal_volume 104 _citation.page_first 7839 _citation.page_last 7844 _citation.year 2007 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17483474 _citation.pdbx_database_id_DOI 10.1073/pnas.0608570104 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Wang, X.' 1 primary 'Truckses, D.M.' 2 primary 'Takada, S.' 3 primary 'Matsumura, T.' 4 primary 'Tanese, N.' 5 primary 'Jacobson, R.H.' 6 # _cell.entry_id 2P6V _cell.length_a 74.852 _cell.length_b 74.852 _cell.length_c 131.785 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2P6V _symmetry.space_group_name_H-M 'P 63 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 182 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Transcription initiation factor TFIID subunit 4' 12651.351 1 ? ? 'TAFH domain' ? 2 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 3 water nat water 18.015 39 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;TBP-associated factor 4, Transcription initiation factor TFIID 135 kDa subunit, TAFII, 135, TAFII-135, TAFII135, TAFII-130, TAFII130 ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;TVPGATTTSSAATETMENV(MLY)(MLY)C(MLY)NFLSTLI(MLY)LASSG(MLY)QSTETAANV(MLY)ELVQNLLDG (MLY)IEAEDFTSRLYRELNSSPQPYLVPFL(MLY)RSLPALRQLTPDSAAFIQQSQQQPPPPTSQ ; _entity_poly.pdbx_seq_one_letter_code_can ;TVPGATTTSSAATETMENVKKCKNFLSTLIKLASSGKQSTETAANVKELVQNLLDGKIEAEDFTSRLYRELNSSPQPYLV PFLKRSLPALRQLTPDSAAFIQQSQQQPPPPTSQ ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 THR n 1 2 VAL n 1 3 PRO n 1 4 GLY n 1 5 ALA n 1 6 THR n 1 7 THR n 1 8 THR n 1 9 SER n 1 10 SER n 1 11 ALA n 1 12 ALA n 1 13 THR n 1 14 GLU n 1 15 THR n 1 16 MET n 1 17 GLU n 1 18 ASN n 1 19 VAL n 1 20 MLY n 1 21 MLY n 1 22 CYS n 1 23 MLY n 1 24 ASN n 1 25 PHE n 1 26 LEU n 1 27 SER n 1 28 THR n 1 29 LEU n 1 30 ILE n 1 31 MLY n 1 32 LEU n 1 33 ALA n 1 34 SER n 1 35 SER n 1 36 GLY n 1 37 MLY n 1 38 GLN n 1 39 SER n 1 40 THR n 1 41 GLU n 1 42 THR n 1 43 ALA n 1 44 ALA n 1 45 ASN n 1 46 VAL n 1 47 MLY n 1 48 GLU n 1 49 LEU n 1 50 VAL n 1 51 GLN n 1 52 ASN n 1 53 LEU n 1 54 LEU n 1 55 ASP n 1 56 GLY n 1 57 MLY n 1 58 ILE n 1 59 GLU n 1 60 ALA n 1 61 GLU n 1 62 ASP n 1 63 PHE n 1 64 THR n 1 65 SER n 1 66 ARG n 1 67 LEU n 1 68 TYR n 1 69 ARG n 1 70 GLU n 1 71 LEU n 1 72 ASN n 1 73 SER n 1 74 SER n 1 75 PRO n 1 76 GLN n 1 77 PRO n 1 78 TYR n 1 79 LEU n 1 80 VAL n 1 81 PRO n 1 82 PHE n 1 83 LEU n 1 84 MLY n 1 85 ARG n 1 86 SER n 1 87 LEU n 1 88 PRO n 1 89 ALA n 1 90 LEU n 1 91 ARG n 1 92 GLN n 1 93 LEU n 1 94 THR n 1 95 PRO n 1 96 ASP n 1 97 SER n 1 98 ALA n 1 99 ALA n 1 100 PHE n 1 101 ILE n 1 102 GLN n 1 103 GLN n 1 104 SER n 1 105 GLN n 1 106 GLN n 1 107 GLN n 1 108 PRO n 1 109 PRO n 1 110 PRO n 1 111 PRO n 1 112 THR n 1 113 SER n 1 114 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene 'TAF4, TAF2C, TAF2C1, TAF4A, TAFII130, TAFII135' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 (DE3) RIL' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pDEST15 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code TAF4_HUMAN _struct_ref.pdbx_db_accession O00268 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;TVPGATTTSSAATETMENVKKCKNFLSTLIKLASSGKQSTETAANVKELVQNLLDGKIEAEDFTSRLYRELNSSPQPYLV PFLKRSLPALRQLTPDSAAFIQQSQQQPPPPTSQ ; _struct_ref.pdbx_align_begin 575 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2P6V _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 105 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O00268 _struct_ref_seq.db_align_beg 575 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 688 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 575 _struct_ref_seq.pdbx_auth_seq_align_end 678 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2P6V MLY A 20 ? UNP O00268 LYS 594 'MODIFIED RESIDUE' 593 1 1 2P6V MLY A 21 ? UNP O00268 LYS 595 'MODIFIED RESIDUE' 594 2 1 2P6V MLY A 23 ? UNP O00268 LYS 597 'MODIFIED RESIDUE' 596 3 1 2P6V MLY A 31 ? UNP O00268 LYS 605 'MODIFIED RESIDUE' 604 4 1 2P6V MLY A 37 ? UNP O00268 LYS 611 'MODIFIED RESIDUE' 610 5 1 2P6V MLY A 47 ? UNP O00268 LYS 621 'MODIFIED RESIDUE' 620 6 1 2P6V MLY A 57 ? UNP O00268 LYS 631 'MODIFIED RESIDUE' 630 7 1 2P6V MLY A 84 ? UNP O00268 LYS 658 'MODIFIED RESIDUE' 657 8 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MLY 'L-peptide linking' n N-DIMETHYL-LYSINE ? 'C8 H18 N2 O2' 174.241 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2P6V _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 4.21 _exptl_crystal.density_percent_sol 70.77 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.6 _exptl_crystal_grow.pdbx_details ;Crystals of methylated hTAF4-TAFH containing SeMet were grown by hanging drop vapor diffusion at 22 C by mixing equal volumes of protein solution and crystallization buffer (200 mM ammonium acetate, 2.2 M ammonium sulfate and 150 mM sodium bromide). , pH 6.6, VAPOR DIFFUSION, HANGING DROP, temperature 295K ; _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 210' _diffrn_detector.pdbx_collection_date 2004-03-16 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.9797 1.0 2 1.0199 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 8.3.1' _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 8.3.1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list '0.9797, 1.0199' # _reflns.entry_id 2P6V _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.d_resolution_high 2.00 _reflns.d_resolution_low 65.94 _reflns.number_all 15659 _reflns.number_obs 15423 _reflns.percent_possible_obs 98.49 _reflns.pdbx_Rmerge_I_obs 0.095 _reflns.pdbx_Rsym_value 0.107 _reflns.pdbx_netI_over_sigmaI 16.7 _reflns.B_iso_Wilson_estimate 42.8 _reflns.pdbx_redundancy 13.9 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.0 _reflns_shell.d_res_low 2.11 _reflns_shell.percent_possible_all 98.3 _reflns_shell.Rmerge_I_obs 0.105 _reflns_shell.pdbx_Rsym_value 0.110 _reflns_shell.meanI_over_sigI_obs 3.7 _reflns_shell.pdbx_redundancy 10.1 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 2184 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 2P6V _refine.ls_number_reflns_obs 15423 _refine.ls_number_reflns_all 15659 _refine.pdbx_ls_sigma_I 0 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 65.94 _refine.ls_d_res_high 2.00 _refine.ls_percent_reflns_obs 98.49 _refine.ls_R_factor_obs 0.21567 _refine.ls_R_factor_all 0.21400 _refine.ls_R_factor_R_work 0.21402 _refine.ls_R_factor_R_free 0.24835 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.2 _refine.ls_number_reflns_R_free 786 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.960 _refine.correlation_coeff_Fo_to_Fc_free 0.948 _refine.B_iso_mean 53.387 _refine.aniso_B[1][1] 2.71 _refine.aniso_B[2][2] 2.71 _refine.aniso_B[3][3] -4.07 _refine.aniso_B[1][2] 1.36 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.119 _refine.pdbx_overall_ESU_R_Free 0.121 _refine.overall_SU_ML 0.102 _refine.overall_SU_B 3.843 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 776 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 5 _refine_hist.number_atoms_solvent 39 _refine_hist.number_atoms_total 820 _refine_hist.d_res_high 2.00 _refine_hist.d_res_low 65.94 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.017 0.021 ? 790 'X-RAY DIFFRACTION' ? r_bond_other_d 0.001 0.020 ? 762 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2.343 2.056 ? 1069 'X-RAY DIFFRACTION' ? r_angle_other_deg 1.167 3.000 ? 1774 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.569 5.000 ? 96 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 38.872 25.152 ? 33 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 14.690 15.000 ? 116 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 18.370 15.000 ? 5 'X-RAY DIFFRACTION' ? r_chiral_restr 0.119 0.200 ? 131 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.006 0.020 ? 834 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.000 0.020 ? 139 'X-RAY DIFFRACTION' ? r_nbd_refined 0.242 0.300 ? 199 'X-RAY DIFFRACTION' ? r_nbd_other 0.220 0.300 ? 793 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.213 0.500 ? 391 'X-RAY DIFFRACTION' ? r_nbtor_other 0.168 0.500 ? 493 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.216 0.500 ? 57 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.154 0.300 ? 6 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 0.199 0.300 ? 40 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.433 0.500 ? 4 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 13.170 5.000 ? 607 'X-RAY DIFFRACTION' ? r_mcbond_other 7.564 5.000 ? 193 'X-RAY DIFFRACTION' ? r_mcangle_it 12.661 3.000 ? 790 'X-RAY DIFFRACTION' ? r_scbond_it 16.183 4.000 ? 324 'X-RAY DIFFRACTION' ? r_scangle_it 17.267 2.000 ? 279 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.000 _refine_ls_shell.d_res_low 2.052 _refine_ls_shell.number_reflns_R_work 1018 _refine_ls_shell.R_factor_R_work 0.342 _refine_ls_shell.percent_reflns_obs 98.34 _refine_ls_shell.R_factor_R_free 0.458 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 50 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2P6V _struct.title 'Structure of TAFH domain of the human TAF4 subunit of TFIID' _struct.pdbx_descriptor 'Transcription initiation factor TFIID subunit 4' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag N _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2P6V _struct_keywords.pdbx_keywords TRANSCRIPTION _struct_keywords.text 'ALPHA HELIX, TRANSCRIPTION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 10 ? SER A 34 ? SER A 583 SER A 607 1 ? 25 HELX_P HELX_P2 2 SER A 39 ? ASP A 55 ? SER A 612 ASP A 628 1 ? 17 HELX_P HELX_P3 3 GLU A 59 ? LEU A 71 ? GLU A 632 LEU A 644 1 ? 13 HELX_P HELX_P4 4 TYR A 78 ? LEU A 93 ? TYR A 651 LEU A 666 1 ? 16 HELX_P HELX_P5 5 ASP A 96 ? SER A 104 ? ASP A 669 SER A 677 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A VAL 19 C ? ? ? 1_555 A MLY 20 N ? ? A VAL 592 A MLY 593 1_555 ? ? ? ? ? ? ? 1.327 ? covale2 covale ? ? A MLY 20 C ? ? ? 1_555 A MLY 21 N ? ? A MLY 593 A MLY 594 1_555 ? ? ? ? ? ? ? 1.327 ? covale3 covale ? ? A MLY 21 C ? ? ? 1_555 A CYS 22 N ? ? A MLY 594 A CYS 595 1_555 ? ? ? ? ? ? ? 1.331 ? covale4 covale ? ? A CYS 22 C ? ? ? 1_555 A MLY 23 N ? ? A CYS 595 A MLY 596 1_555 ? ? ? ? ? ? ? 1.326 ? covale5 covale ? ? A MLY 23 C ? ? ? 1_555 A ASN 24 N ? ? A MLY 596 A ASN 597 1_555 ? ? ? ? ? ? ? 1.323 ? covale6 covale ? ? A ILE 30 C ? ? ? 1_555 A MLY 31 N ? ? A ILE 603 A MLY 604 1_555 ? ? ? ? ? ? ? 1.334 ? covale7 covale ? ? A MLY 31 C ? ? ? 1_555 A LEU 32 N ? ? A MLY 604 A LEU 605 1_555 ? ? ? ? ? ? ? 1.327 ? covale8 covale ? ? A GLY 36 C ? ? ? 1_555 A MLY 37 N ? ? A GLY 609 A MLY 610 1_555 ? ? ? ? ? ? ? 1.327 ? covale9 covale ? ? A MLY 37 C ? ? ? 1_555 A GLN 38 N ? ? A MLY 610 A GLN 611 1_555 ? ? ? ? ? ? ? 1.336 ? covale10 covale ? ? A VAL 46 C ? ? ? 1_555 A MLY 47 N ? ? A VAL 619 A MLY 620 1_555 ? ? ? ? ? ? ? 1.334 ? covale11 covale ? ? A MLY 47 C ? ? ? 1_555 A GLU 48 N ? ? A MLY 620 A GLU 621 1_555 ? ? ? ? ? ? ? 1.329 ? covale12 covale ? ? A GLY 56 C ? ? ? 1_555 A MLY 57 N ? ? A GLY 629 A MLY 630 1_555 ? ? ? ? ? ? ? 1.327 ? covale13 covale ? ? A MLY 57 C ? ? ? 1_555 A ILE 58 N ? ? A MLY 630 A ILE 631 1_555 ? ? ? ? ? ? ? 1.336 ? covale14 covale ? ? A LEU 83 C ? ? ? 1_555 A MLY 84 N ? ? A LEU 656 A MLY 657 1_555 ? ? ? ? ? ? ? 1.326 ? covale15 covale ? ? A MLY 84 C ? ? ? 1_555 A ARG 85 N ? ? A MLY 657 A ARG 658 1_555 ? ? ? ? ? ? ? 1.317 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id ? _struct_site.pdbx_auth_comp_id ? _struct_site.pdbx_auth_seq_id ? _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 5 _struct_site.details 'BINDING SITE FOR RESIDUE SO4 A 700' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 SER A 73 ? SER A 646 . ? 2_655 ? 2 AC1 5 SER A 73 ? SER A 646 . ? 1_555 ? 3 AC1 5 SER A 74 ? SER A 647 . ? 2_655 ? 4 AC1 5 SER A 74 ? SER A 647 . ? 3_665 ? 5 AC1 5 SER A 74 ? SER A 647 . ? 1_555 ? # _database_PDB_matrix.entry_id 2P6V _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2P6V _atom_sites.fract_transf_matrix[1][1] 0.013360 _atom_sites.fract_transf_matrix[1][2] 0.007713 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015426 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007588 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 THR 1 574 ? ? ? A . n A 1 2 VAL 2 575 ? ? ? A . n A 1 3 PRO 3 576 ? ? ? A . n A 1 4 GLY 4 577 ? ? ? A . n A 1 5 ALA 5 578 ? ? ? A . n A 1 6 THR 6 579 ? ? ? A . n A 1 7 THR 7 580 ? ? ? A . n A 1 8 THR 8 581 ? ? ? A . n A 1 9 SER 9 582 582 SER SER A . n A 1 10 SER 10 583 583 SER SER A . n A 1 11 ALA 11 584 584 ALA ALA A . n A 1 12 ALA 12 585 585 ALA ALA A . n A 1 13 THR 13 586 586 THR THR A . n A 1 14 GLU 14 587 587 GLU GLU A . n A 1 15 THR 15 588 588 THR THR A . n A 1 16 MET 16 589 589 MET MET A . n A 1 17 GLU 17 590 590 GLU GLU A . n A 1 18 ASN 18 591 591 ASN ASN A . n A 1 19 VAL 19 592 592 VAL VAL A . n A 1 20 MLY 20 593 593 MLY MLY A . n A 1 21 MLY 21 594 594 MLY MLY A . n A 1 22 CYS 22 595 595 CYS CYS A . n A 1 23 MLY 23 596 596 MLY MLY A . n A 1 24 ASN 24 597 597 ASN ASN A . n A 1 25 PHE 25 598 598 PHE PHE A . n A 1 26 LEU 26 599 599 LEU LEU A . n A 1 27 SER 27 600 600 SER SER A . n A 1 28 THR 28 601 601 THR THR A . n A 1 29 LEU 29 602 602 LEU LEU A . n A 1 30 ILE 30 603 603 ILE ILE A . n A 1 31 MLY 31 604 604 MLY MLY A . n A 1 32 LEU 32 605 605 LEU LEU A . n A 1 33 ALA 33 606 606 ALA ALA A . n A 1 34 SER 34 607 607 SER SER A . n A 1 35 SER 35 608 608 SER SER A . n A 1 36 GLY 36 609 609 GLY GLY A . n A 1 37 MLY 37 610 610 MLY MLY A . n A 1 38 GLN 38 611 611 GLN GLN A . n A 1 39 SER 39 612 612 SER SER A . n A 1 40 THR 40 613 613 THR THR A . n A 1 41 GLU 41 614 614 GLU GLU A . n A 1 42 THR 42 615 615 THR THR A . n A 1 43 ALA 43 616 616 ALA ALA A . n A 1 44 ALA 44 617 617 ALA ALA A . n A 1 45 ASN 45 618 618 ASN ASN A . n A 1 46 VAL 46 619 619 VAL VAL A . n A 1 47 MLY 47 620 620 MLY MLY A . n A 1 48 GLU 48 621 621 GLU GLU A . n A 1 49 LEU 49 622 622 LEU LEU A . n A 1 50 VAL 50 623 623 VAL VAL A . n A 1 51 GLN 51 624 624 GLN GLN A . n A 1 52 ASN 52 625 625 ASN ASN A . n A 1 53 LEU 53 626 626 LEU LEU A . n A 1 54 LEU 54 627 627 LEU LEU A . n A 1 55 ASP 55 628 628 ASP ASP A . n A 1 56 GLY 56 629 629 GLY GLY A . n A 1 57 MLY 57 630 630 MLY MLY A . n A 1 58 ILE 58 631 631 ILE ILE A . n A 1 59 GLU 59 632 632 GLU GLU A . n A 1 60 ALA 60 633 633 ALA ALA A . n A 1 61 GLU 61 634 634 GLU GLU A . n A 1 62 ASP 62 635 635 ASP ASP A . n A 1 63 PHE 63 636 636 PHE PHE A . n A 1 64 THR 64 637 637 THR THR A . n A 1 65 SER 65 638 638 SER SER A . n A 1 66 ARG 66 639 639 ARG ARG A . n A 1 67 LEU 67 640 640 LEU LEU A . n A 1 68 TYR 68 641 641 TYR TYR A . n A 1 69 ARG 69 642 642 ARG ARG A . n A 1 70 GLU 70 643 643 GLU GLU A . n A 1 71 LEU 71 644 644 LEU LEU A . n A 1 72 ASN 72 645 645 ASN ASN A . n A 1 73 SER 73 646 646 SER SER A . n A 1 74 SER 74 647 647 SER SER A . n A 1 75 PRO 75 648 648 PRO PRO A . n A 1 76 GLN 76 649 649 GLN GLN A . n A 1 77 PRO 77 650 650 PRO PRO A . n A 1 78 TYR 78 651 651 TYR TYR A . n A 1 79 LEU 79 652 652 LEU LEU A . n A 1 80 VAL 80 653 653 VAL VAL A . n A 1 81 PRO 81 654 654 PRO PRO A . n A 1 82 PHE 82 655 655 PHE PHE A . n A 1 83 LEU 83 656 656 LEU LEU A . n A 1 84 MLY 84 657 657 MLY MLY A . n A 1 85 ARG 85 658 658 ARG ARG A . n A 1 86 SER 86 659 659 SER SER A . n A 1 87 LEU 87 660 660 LEU LEU A . n A 1 88 PRO 88 661 661 PRO PRO A . n A 1 89 ALA 89 662 662 ALA ALA A . n A 1 90 LEU 90 663 663 LEU LEU A . n A 1 91 ARG 91 664 664 ARG ARG A . n A 1 92 GLN 92 665 665 GLN GLN A . n A 1 93 LEU 93 666 666 LEU LEU A . n A 1 94 THR 94 667 667 THR THR A . n A 1 95 PRO 95 668 668 PRO PRO A . n A 1 96 ASP 96 669 669 ASP ASP A . n A 1 97 SER 97 670 670 SER SER A . n A 1 98 ALA 98 671 671 ALA ALA A . n A 1 99 ALA 99 672 672 ALA ALA A . n A 1 100 PHE 100 673 673 PHE PHE A . n A 1 101 ILE 101 674 674 ILE ILE A . n A 1 102 GLN 102 675 675 GLN GLN A . n A 1 103 GLN 103 676 676 GLN GLN A . n A 1 104 SER 104 677 677 SER SER A . n A 1 105 GLN 105 678 678 GLN GLN A . n A 1 106 GLN 106 679 ? ? ? A . n A 1 107 GLN 107 680 ? ? ? A . n A 1 108 PRO 108 681 ? ? ? A . n A 1 109 PRO 109 682 ? ? ? A . n A 1 110 PRO 110 683 ? ? ? A . n A 1 111 PRO 111 684 ? ? ? A . n A 1 112 THR 112 685 ? ? ? A . n A 1 113 SER 113 686 ? ? ? A . n A 1 114 GLN 114 687 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 1 700 700 SO4 SO4 A . C 3 HOH 1 1 1 HOH HOH A . C 3 HOH 2 2 2 HOH HOH A . C 3 HOH 3 3 3 HOH HOH A . C 3 HOH 4 4 4 HOH HOH A . C 3 HOH 5 5 5 HOH HOH A . C 3 HOH 6 6 6 HOH HOH A . C 3 HOH 7 7 7 HOH HOH A . C 3 HOH 8 8 8 HOH HOH A . C 3 HOH 9 9 9 HOH HOH A . C 3 HOH 10 10 10 HOH HOH A . C 3 HOH 11 11 11 HOH HOH A . C 3 HOH 12 12 12 HOH HOH A . C 3 HOH 13 13 13 HOH HOH A . C 3 HOH 14 14 14 HOH HOH A . C 3 HOH 15 15 15 HOH HOH A . C 3 HOH 16 16 16 HOH HOH A . C 3 HOH 17 17 17 HOH HOH A . C 3 HOH 18 18 18 HOH HOH A . C 3 HOH 19 19 19 HOH HOH A . C 3 HOH 20 20 20 HOH HOH A . C 3 HOH 21 21 21 HOH HOH A . C 3 HOH 22 22 22 HOH HOH A . C 3 HOH 23 23 23 HOH HOH A . C 3 HOH 24 24 24 HOH HOH A . C 3 HOH 25 25 25 HOH HOH A . C 3 HOH 26 26 26 HOH HOH A . C 3 HOH 27 27 27 HOH HOH A . C 3 HOH 28 28 28 HOH HOH A . C 3 HOH 29 29 29 HOH HOH A . C 3 HOH 30 30 30 HOH HOH A . C 3 HOH 31 31 31 HOH HOH A . C 3 HOH 32 32 32 HOH HOH A . C 3 HOH 33 33 33 HOH HOH A . C 3 HOH 34 34 34 HOH HOH A . C 3 HOH 35 35 35 HOH HOH A . C 3 HOH 36 36 36 HOH HOH A . C 3 HOH 37 37 37 HOH HOH A . C 3 HOH 38 38 38 HOH HOH A . C 3 HOH 39 39 39 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MLY 20 A MLY 593 ? LYS N-DIMETHYL-LYSINE 2 A MLY 21 A MLY 594 ? LYS N-DIMETHYL-LYSINE 3 A MLY 23 A MLY 596 ? LYS N-DIMETHYL-LYSINE 4 A MLY 31 A MLY 604 ? LYS N-DIMETHYL-LYSINE 5 A MLY 37 A MLY 610 ? LYS N-DIMETHYL-LYSINE 6 A MLY 47 A MLY 620 ? LYS N-DIMETHYL-LYSINE 7 A MLY 57 A MLY 630 ? LYS N-DIMETHYL-LYSINE 8 A MLY 84 A MLY 657 ? LYS N-DIMETHYL-LYSINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6 _pdbx_struct_assembly_gen.asym_id_list A,B,C # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_655 -y+1,x-y,z -0.5000000000 -0.8660254038 0.0000000000 74.8520000000 0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_665 -x+y+1,-x+1,z -0.5000000000 0.8660254038 0.0000000000 37.4260000000 -0.8660254038 -0.5000000000 0.0000000000 64.8237335241 0.0000000000 0.0000000000 1.0000000000 0.0000000000 4 'crystal symmetry operation' 10_666 -y+1,-x+1,-z+3/2 0.5000000000 -0.8660254038 0.0000000000 37.4260000000 -0.8660254038 -0.5000000000 0.0000000000 64.8237335241 0.0000000000 0.0000000000 -1.0000000000 197.6775000000 5 'crystal symmetry operation' 11_656 -x+y+1,y,-z+3/2 -1.0000000000 0.0000000000 0.0000000000 74.8520000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 197.6775000000 6 'crystal symmetry operation' 12_556 x,x-y,-z+3/2 0.5000000000 0.8660254038 0.0000000000 0.0000000000 0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 197.6775000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A SO4 700 ? B SO4 . 2 1 A HOH 31 ? C HOH . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-05-15 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0005 ? 1 ADSC 'data collection' QUANTUM ? 2 MOSFLM 'data reduction' . ? 3 CCP4 'data scaling' '(SCALA)' ? 4 MLPHARE phasing . ? 5 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 29 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 38 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.09 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 33 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 35 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 3_665 _pdbx_validate_symm_contact.dist 1.99 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CB _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ARG _pdbx_validate_rmsd_angle.auth_seq_id_1 642 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 B _pdbx_validate_rmsd_angle.auth_atom_id_2 CA _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ARG _pdbx_validate_rmsd_angle.auth_seq_id_2 642 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 C _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ARG _pdbx_validate_rmsd_angle.auth_seq_id_3 642 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 98.01 _pdbx_validate_rmsd_angle.angle_target_value 110.40 _pdbx_validate_rmsd_angle.angle_deviation -12.39 _pdbx_validate_rmsd_angle.angle_standard_deviation 2.00 _pdbx_validate_rmsd_angle.linker_flag N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id SER _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 677 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -77.97 _pdbx_validate_torsion.psi 35.78 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A THR 574 ? A THR 1 2 1 Y 1 A VAL 575 ? A VAL 2 3 1 Y 1 A PRO 576 ? A PRO 3 4 1 Y 1 A GLY 577 ? A GLY 4 5 1 Y 1 A ALA 578 ? A ALA 5 6 1 Y 1 A THR 579 ? A THR 6 7 1 Y 1 A THR 580 ? A THR 7 8 1 Y 1 A THR 581 ? A THR 8 9 1 Y 1 A GLN 679 ? A GLN 106 10 1 Y 1 A GLN 680 ? A GLN 107 11 1 Y 1 A PRO 681 ? A PRO 108 12 1 Y 1 A PRO 682 ? A PRO 109 13 1 Y 1 A PRO 683 ? A PRO 110 14 1 Y 1 A PRO 684 ? A PRO 111 15 1 Y 1 A THR 685 ? A THR 112 16 1 Y 1 A SER 686 ? A SER 113 17 1 Y 1 A GLN 687 ? A GLN 114 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 water HOH #