HEADER METAL BINDING PROTEIN, HYDROLASE 20-MAR-07 2P7O TITLE CRYSTAL STRUCTURE OF GENOMICALLY ENCODED FOSFOMYCIN RESISTANCE TITLE 2 PROTEIN, FOSX, FROM LISTERIA MONOCYTOGENES (TETRAGONAL FORM) COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLYOXALASE FAMILY PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LISTERIA MONOCYTOGENES; SOURCE 3 ORGANISM_TAXID: 169963; SOURCE 4 STRAIN: EGD-E; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET20B(+) KEYWDS FOSFOMYCIN RESISTANCE PROTEIN, MN BINDING, ANTIBIOTIC RESISTANCE, KEYWDS 2 METAL BINDING PROTEIN, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR K.L.FILLGROVE,S.PAKHOMOVA,M.SCHAAB,M.E.NEWCOMER,R.N.ARMSTRONG REVDAT 4 30-AUG-23 2P7O 1 REMARK LINK REVDAT 3 13-JUL-11 2P7O 1 VERSN REVDAT 2 24-FEB-09 2P7O 1 VERSN REVDAT 1 17-JUL-07 2P7O 0 JRNL AUTH K.L.FILLGROVE,S.PAKHOMOVA,M.R.SCHAAB,M.E.NEWCOMER, JRNL AUTH 2 R.N.ARMSTRONG JRNL TITL STRUCTURE AND MECHANISM OF THE GENOMICALLY ENCODED JRNL TITL 2 FOSFOMYCIN RESISTANCE PROTEIN, FOSX, FROM LISTERIA JRNL TITL 3 MONOCYTOGENES. JRNL REF BIOCHEMISTRY V. 46 8110 2007 JRNL REFN ISSN 0006-2960 JRNL PMID 17567049 JRNL DOI 10.1021/BI700625P REMARK 2 REMARK 2 RESOLUTION. 1.44 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : SHELXL-97 REMARK 3 AUTHORS : G.M.SHELDRICK REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.44 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 10.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 80.5 REMARK 3 CROSS-VALIDATION METHOD : FREE R REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (NO CUTOFF). REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : 0.126 REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : 0.124 REMARK 3 FREE R VALUE (NO CUTOFF) : 0.167 REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : 3.800 REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : 1453 REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : 38298 REMARK 3 REMARK 3 FIT/AGREEMENT OF MODEL FOR DATA WITH F>4SIG(F). REMARK 3 R VALUE (WORKING + TEST SET, F>4SIG(F)) : 0.117 REMARK 3 R VALUE (WORKING SET, F>4SIG(F)) : 0.116 REMARK 3 FREE R VALUE (F>4SIG(F)) : 0.157 REMARK 3 FREE R VALUE TEST SET SIZE (%, F>4SIG(F)) : 3.700 REMARK 3 FREE R VALUE TEST SET COUNT (F>4SIG(F)) : 1192 REMARK 3 TOTAL NUMBER OF REFLECTIONS (F>4SIG(F)) : 31792 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2050 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 168 REMARK 3 REMARK 3 MODEL REFINEMENT. REMARK 3 OCCUPANCY SUM OF NON-HYDROGEN ATOMS : 2223.0 REMARK 3 OCCUPANCY SUM OF HYDROGEN ATOMS : 0.00 REMARK 3 NUMBER OF DISCRETELY DISORDERED RESIDUES : 7 REMARK 3 NUMBER OF LEAST-SQUARES PARAMETERS : 20274 REMARK 3 NUMBER OF RESTRAINTS : 25273 REMARK 3 REMARK 3 RMS DEVIATIONS FROM RESTRAINT TARGET VALUES. REMARK 3 BOND LENGTHS (A) : 0.012 REMARK 3 ANGLE DISTANCES (A) : 0.034 REMARK 3 SIMILAR DISTANCES (NO TARGET VALUES) (A) : 0.000 REMARK 3 DISTANCES FROM RESTRAINT PLANES (A) : 0.034 REMARK 3 ZERO CHIRAL VOLUMES (A**3) : 0.133 REMARK 3 NON-ZERO CHIRAL VOLUMES (A**3) : 0.156 REMARK 3 ANTI-BUMPING DISTANCE RESTRAINTS (A) : 0.011 REMARK 3 RIGID-BOND ADP COMPONENTS (A**2) : 0.004 REMARK 3 SIMILAR ADP COMPONENTS (A**2) : 0.072 REMARK 3 APPROXIMATELY ISOTROPIC ADPS (A**2) : 0.075 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED: NULL REMARK 3 REMARK 3 STEREOCHEMISTRY TARGET VALUES : ENGH AND HUBER REMARK 3 SPECIAL CASE: NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: ANISOTROPIC REFINEMENT REMARK 4 REMARK 4 2P7O COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-MAR-07. REMARK 100 THE DEPOSITION ID IS D_1000042069. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-APR-02 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.1 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : ENRAF-NONIUS FR591 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : MIRRORS REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 41281 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.440 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 86.5 REMARK 200 DATA REDUNDANCY : 4.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.04800 REMARK 200 FOR THE DATA SET : 24.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.44 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.46 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.6 REMARK 200 DATA REDUNDANCY IN SHELL : 4.20 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.47800 REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 2P7K REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.60 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.99 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 22% PEG 3350, 0.1 M TRIS-HCL, 0.2 M REMARK 280 MGCL2, 5% ISOPROPANOL, PH 8.1, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+3/4 REMARK 290 4555 Y,-X,Z+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 28.41750 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 42.62625 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 14.20875 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3760 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12770 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -39.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 33 REMARK 465 SER A 34 REMARK 465 GLY A 35 REMARK 465 ASP A 36 REMARK 465 LYS A 37 REMARK 465 GLU A 133 REMARK 465 SER B 33 REMARK 465 SER B 34 REMARK 465 GLY B 35 REMARK 465 ASP B 36 REMARK 465 LYS B 37 REMARK 465 HIS B 132 REMARK 465 GLU B 133 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 3 OG REMARK 470 TYR A 32 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 THR A 38 OG1 CG2 REMARK 470 SER A 40 OG REMARK 470 SER A 61 OG REMARK 470 LEU A 62 CG CD1 CD2 REMARK 470 HIS A 132 CG ND1 CD2 CE1 NE2 REMARK 470 MET B 1 CG SD CE REMARK 470 LYS B 13 CG CD CE NZ REMARK 470 TYR B 32 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 SER B 40 OG REMARK 470 LEU B 62 CG CD1 CD2 REMARK 470 GLN B 63 CG CD OE1 NE2 REMARK 470 GLU B 64 CG CD OE1 OE2 REMARK 470 ARG B 85 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MET A 1 CB - CA - C ANGL. DEV. = 21.3 DEGREES REMARK 500 MET A 1 CA - CB - CG ANGL. DEV. = 19.4 DEGREES REMARK 500 MET A 1 CA - C - N ANGL. DEV. = 15.1 DEGREES REMARK 500 MET A 57 CA - CB - CG ANGL. DEV. = 11.3 DEGREES REMARK 500 ASP A 60 C - N - CA ANGL. DEV. = 19.6 DEGREES REMARK 500 ASP A 80 CB - CG - OD2 ANGL. DEV. = 6.1 DEGREES REMARK 500 ARG A 85 NE - CZ - NH1 ANGL. DEV. = -5.0 DEGREES REMARK 500 PHE B 39 C - N - CA ANGL. DEV. = 19.1 DEGREES REMARK 500 LEU B 62 C - N - CA ANGL. DEV. = 18.9 DEGREES REMARK 500 ARG B 65 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 ARG B 105 NE - CZ - NH2 ANGL. DEV. = 3.0 DEGREES REMARK 500 TYR B 110 CB - CG - CD1 ANGL. DEV. = -3.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 60 -97.27 24.81 REMARK 500 SER A 61 -36.94 -165.81 REMARK 500 LEU A 62 -156.89 -174.38 REMARK 500 GLN A 63 137.29 -177.13 REMARK 500 ASP A 111 -145.85 -91.37 REMARK 500 PHE B 39 34.21 -65.77 REMARK 500 SER B 42 67.43 -110.14 REMARK 500 GLN B 63 -152.19 -86.20 REMARK 500 ASP B 111 -157.71 -84.66 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 SER B 61 LEU B 62 -40.83 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B4000 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 7 NE2 REMARK 620 2 HIS B 69 NE2 114.2 REMARK 620 3 GLU B 118 OE1 96.6 86.9 REMARK 620 4 GLU B 126 OE1 96.9 90.9 166.0 REMARK 620 5 HOH B7001 O 87.2 156.7 81.2 95.8 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A6000 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 69 NE2 REMARK 620 2 GLU A 118 OE1 84.0 REMARK 620 3 GLU A 126 OE1 90.7 166.6 REMARK 620 4 HOH A7005 O 149.9 83.3 95.4 REMARK 620 5 HIS B 7 NE2 113.2 95.5 97.9 95.2 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 4000 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 6000 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2P7K RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF GENOMICALLY ENCODED FOSFOMYCIN RESISTANCE REMARK 900 PROTEIN, FOSX, FROM LISTERIA MONOCYTOGENES (HEXAGONAL FORM) REMARK 900 RELATED ID: 2P7L RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF GENOMICALLY ENCODED FOSFOMYCIN RESISTANCE REMARK 900 PROTEIN, FOSX, FROM LISTERIA MONOCYTOGENES (MONOCLINIC FORM GROWN REMARK 900 AT PH 5.75) REMARK 900 RELATED ID: 2P7M RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF GENOMICALLY ENCODED FOSFOMYCIN RESISTANCE REMARK 900 PROTEIN, FOSX, FROM LISTERIA MONOCYTOGENES (MONOCLINIC FORM GROWN REMARK 900 AT PH 6.5) REMARK 900 RELATED ID: 2P7P RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF GENOMICALLY ENCODED FOSFOMYCIN RESISTANCE REMARK 900 PROTEIN, FOSX, FROM LISTERIA MONOCYTOGENES COMPLEXED WITH MN(II) REMARK 900 AND SULFATE ION REMARK 900 RELATED ID: 2P7Q RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF E126Q MUTANT OF GENOMICALLY ENCODED FOSFOMYCIN REMARK 900 RESISTANCE PROTEIN, FOSX, FROM LISTERIA MONOCYTOGENES COMPLEXED REMARK 900 WITH MN(II) AND 1S,2S-DIHYDROXYPROPYLPHOSPHONIC ACID DBREF 2P7O A 1 133 UNP Q71YW5 Q71YW5_LISMF 1 133 DBREF 2P7O B 1 133 UNP Q71YW5 Q71YW5_LISMF 1 133 SEQRES 1 A 133 MET ILE SER GLY LEU SER HIS ILE THR LEU ILE VAL LYS SEQRES 2 A 133 ASP LEU ASN LYS THR THR ALA PHE LEU GLN ASN ILE PHE SEQRES 3 A 133 ASN ALA GLU GLU ILE TYR SER SER GLY ASP LYS THR PHE SEQRES 4 A 133 SER LEU SER LYS GLU LYS PHE PHE LEU ILE ALA GLY LEU SEQRES 5 A 133 TRP ILE CYS ILE MET GLU GLY ASP SER LEU GLN GLU ARG SEQRES 6 A 133 THR TYR ASN HIS ILE ALA PHE GLN ILE GLN SER GLU GLU SEQRES 7 A 133 VAL ASP GLU TYR THR GLU ARG ILE LYS ALA LEU GLY VAL SEQRES 8 A 133 GLU MET LYS PRO GLU ARG PRO ARG VAL GLN GLY GLU GLY SEQRES 9 A 133 ARG SER ILE TYR PHE TYR ASP PHE ASP ASN HIS LEU PHE SEQRES 10 A 133 GLU LEU HIS ALA GLY THR LEU GLU GLU ARG LEU LYS ARG SEQRES 11 A 133 TYR HIS GLU SEQRES 1 B 133 MET ILE SER GLY LEU SER HIS ILE THR LEU ILE VAL LYS SEQRES 2 B 133 ASP LEU ASN LYS THR THR ALA PHE LEU GLN ASN ILE PHE SEQRES 3 B 133 ASN ALA GLU GLU ILE TYR SER SER GLY ASP LYS THR PHE SEQRES 4 B 133 SER LEU SER LYS GLU LYS PHE PHE LEU ILE ALA GLY LEU SEQRES 5 B 133 TRP ILE CYS ILE MET GLU GLY ASP SER LEU GLN GLU ARG SEQRES 6 B 133 THR TYR ASN HIS ILE ALA PHE GLN ILE GLN SER GLU GLU SEQRES 7 B 133 VAL ASP GLU TYR THR GLU ARG ILE LYS ALA LEU GLY VAL SEQRES 8 B 133 GLU MET LYS PRO GLU ARG PRO ARG VAL GLN GLY GLU GLY SEQRES 9 B 133 ARG SER ILE TYR PHE TYR ASP PHE ASP ASN HIS LEU PHE SEQRES 10 B 133 GLU LEU HIS ALA GLY THR LEU GLU GLU ARG LEU LYS ARG SEQRES 11 B 133 TYR HIS GLU HET MN A6000 1 HET MN B4000 1 HETNAM MN MANGANESE (II) ION FORMUL 3 MN 2(MN 2+) FORMUL 5 HOH *168(H2 O) HELIX 1 1 ASP A 14 ASN A 27 1 14 HELIX 2 2 GLN A 75 GLU A 77 5 3 HELIX 3 3 GLU A 78 GLY A 90 1 13 HELIX 4 4 ARG A 127 HIS A 132 5 6 HELIX 5 5 ASP B 14 ASN B 27 1 14 HELIX 6 6 GLN B 75 GLU B 77 5 3 HELIX 7 7 GLU B 78 LEU B 89 1 12 HELIX 8 8 ARG B 127 TYR B 131 5 5 SHEET 1 A 7 GLU A 29 GLU A 30 0 SHEET 2 A 7 GLU A 44 ILE A 49 -1 O LEU A 48 N GLU A 29 SHEET 3 A 7 LEU A 52 GLU A 58 -1 O ILE A 54 N PHE A 47 SHEET 4 A 7 GLY A 4 VAL A 12 1 N LEU A 10 O CYS A 55 SHEET 5 A 7 HIS B 69 GLN B 73 -1 O GLN B 73 N GLY A 4 SHEET 6 A 7 LEU B 116 HIS B 120 1 O HIS B 120 N PHE B 72 SHEET 7 A 7 SER B 106 TYR B 110 -1 N PHE B 109 O PHE B 117 SHEET 1 B 8 MET A 93 LYS A 94 0 SHEET 2 B 8 SER A 106 TYR A 110 -1 O TYR A 108 N LYS A 94 SHEET 3 B 8 LEU A 116 HIS A 120 -1 O PHE A 117 N PHE A 109 SHEET 4 B 8 HIS A 69 GLN A 73 1 N PHE A 72 O HIS A 120 SHEET 5 B 8 GLY B 4 VAL B 12 -1 O GLY B 4 N GLN A 73 SHEET 6 B 8 LEU B 52 GLU B 58 1 O CYS B 55 N ILE B 8 SHEET 7 B 8 GLU B 44 ILE B 49 -1 N LYS B 45 O ILE B 56 SHEET 8 B 8 GLU B 29 ILE B 31 -1 N ILE B 31 O PHE B 46 LINK NE2 HIS A 7 MN MN B4000 1555 1555 2.17 LINK NE2 HIS A 69 MN MN A6000 1555 1555 2.12 LINK OE1 GLU A 118 MN MN A6000 1555 1555 2.15 LINK OE1 GLU A 126 MN MN A6000 1555 1555 2.07 LINK MN MN A6000 O HOH A7005 1555 1555 2.19 LINK MN MN A6000 NE2 HIS B 7 1555 1555 2.22 LINK NE2 HIS B 69 MN MN B4000 1555 1555 2.31 LINK OE1 GLU B 118 MN MN B4000 1555 1555 2.04 LINK OE1 GLU B 126 MN MN B4000 1555 1555 2.23 LINK MN MN B4000 O HOH B7001 1555 1555 2.29 CISPEP 1 MET A 1 ILE A 2 0 -22.63 SITE 1 AC1 6 HIS A 7 HIS B 69 TYR B 108 GLU B 118 SITE 2 AC1 6 GLU B 126 HOH B7001 SITE 1 AC2 6 HIS A 69 TYR A 108 GLU A 118 GLU A 126 SITE 2 AC2 6 HOH A7005 HIS B 7 CRYST1 68.579 68.579 56.835 90.00 90.00 90.00 P 43 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014582 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014582 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017595 0.00000