data_2P87 # _entry.id 2P87 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2P87 pdb_00002p87 10.2210/pdb2p87/pdb RCSB RCSB042088 ? ? WWPDB D_1000042088 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-05-22 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-02-21 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.entry_id 2P87 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.recvd_initial_deposition_date 2007-03-21 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry N _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Zhang, L.' 1 'Shen, J.' 2 'Guarnieri, M.T.' 3 'Heroux, A.' 4 'Yang, K.' 5 'Zhao, R.' 6 # _citation.id primary _citation.title 'Crystal structure of the C-terminal domain of splicing factor Prp8 carrying retinitis pigmentosa mutants' _citation.journal_abbrev 'Protein Sci.' _citation.journal_volume 16 _citation.page_first 1024 _citation.page_last 1031 _citation.year 2007 _citation.journal_id_ASTM PRCIEI _citation.country US _citation.journal_id_ISSN 0961-8368 _citation.journal_id_CSD 0795 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17473007 _citation.pdbx_database_id_DOI 10.1110/ps.072872007 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Zhang, L.' 1 ? primary 'Shen, J.' 2 ? primary 'Guarnieri, M.T.' 3 ? primary 'Heroux, A.' 4 ? primary 'Yang, K.' 5 ? primary 'Zhao, R.' 6 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Pre-mRNA-splicing factor Prp8' 31197.045 1 ? ? 'C-terminal domain' ? 2 water nat water 18.015 121 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name Prp8 # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;TASFASRTEWRVRAISSTNLHLRTQHIYVNSDDVKDTGYTYILPKNILKKFITISDLRTQIAGFMYGVSPPDNPQVKEIR CIVLVPQTGSHQQVNLPTQLPDHELLRDFEPLGWMHTQPNELPQLSPQDVTTHAKLLTDNISWDGEKTVMITCSFTPGSV SLTAYKLTPSGYEWGKANTDKGNNPKGYMPTHYEKVQMLLSDRFLGYFMVPSNGVWNYNFQGQRWSPAMKFDVCLSNPKE YYHEDHRPVHFHNFKAFDDPLGTGSADREDAFA ; _entity_poly.pdbx_seq_one_letter_code_can ;TASFASRTEWRVRAISSTNLHLRTQHIYVNSDDVKDTGYTYILPKNILKKFITISDLRTQIAGFMYGVSPPDNPQVKEIR CIVLVPQTGSHQQVNLPTQLPDHELLRDFEPLGWMHTQPNELPQLSPQDVTTHAKLLTDNISWDGEKTVMITCSFTPGSV SLTAYKLTPSGYEWGKANTDKGNNPKGYMPTHYEKVQMLLSDRFLGYFMVPSNGVWNYNFQGQRWSPAMKFDVCLSNPKE YYHEDHRPVHFHNFKAFDDPLGTGSADREDAFA ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 THR n 1 2 ALA n 1 3 SER n 1 4 PHE n 1 5 ALA n 1 6 SER n 1 7 ARG n 1 8 THR n 1 9 GLU n 1 10 TRP n 1 11 ARG n 1 12 VAL n 1 13 ARG n 1 14 ALA n 1 15 ILE n 1 16 SER n 1 17 SER n 1 18 THR n 1 19 ASN n 1 20 LEU n 1 21 HIS n 1 22 LEU n 1 23 ARG n 1 24 THR n 1 25 GLN n 1 26 HIS n 1 27 ILE n 1 28 TYR n 1 29 VAL n 1 30 ASN n 1 31 SER n 1 32 ASP n 1 33 ASP n 1 34 VAL n 1 35 LYS n 1 36 ASP n 1 37 THR n 1 38 GLY n 1 39 TYR n 1 40 THR n 1 41 TYR n 1 42 ILE n 1 43 LEU n 1 44 PRO n 1 45 LYS n 1 46 ASN n 1 47 ILE n 1 48 LEU n 1 49 LYS n 1 50 LYS n 1 51 PHE n 1 52 ILE n 1 53 THR n 1 54 ILE n 1 55 SER n 1 56 ASP n 1 57 LEU n 1 58 ARG n 1 59 THR n 1 60 GLN n 1 61 ILE n 1 62 ALA n 1 63 GLY n 1 64 PHE n 1 65 MET n 1 66 TYR n 1 67 GLY n 1 68 VAL n 1 69 SER n 1 70 PRO n 1 71 PRO n 1 72 ASP n 1 73 ASN n 1 74 PRO n 1 75 GLN n 1 76 VAL n 1 77 LYS n 1 78 GLU n 1 79 ILE n 1 80 ARG n 1 81 CYS n 1 82 ILE n 1 83 VAL n 1 84 LEU n 1 85 VAL n 1 86 PRO n 1 87 GLN n 1 88 THR n 1 89 GLY n 1 90 SER n 1 91 HIS n 1 92 GLN n 1 93 GLN n 1 94 VAL n 1 95 ASN n 1 96 LEU n 1 97 PRO n 1 98 THR n 1 99 GLN n 1 100 LEU n 1 101 PRO n 1 102 ASP n 1 103 HIS n 1 104 GLU n 1 105 LEU n 1 106 LEU n 1 107 ARG n 1 108 ASP n 1 109 PHE n 1 110 GLU n 1 111 PRO n 1 112 LEU n 1 113 GLY n 1 114 TRP n 1 115 MET n 1 116 HIS n 1 117 THR n 1 118 GLN n 1 119 PRO n 1 120 ASN n 1 121 GLU n 1 122 LEU n 1 123 PRO n 1 124 GLN n 1 125 LEU n 1 126 SER n 1 127 PRO n 1 128 GLN n 1 129 ASP n 1 130 VAL n 1 131 THR n 1 132 THR n 1 133 HIS n 1 134 ALA n 1 135 LYS n 1 136 LEU n 1 137 LEU n 1 138 THR n 1 139 ASP n 1 140 ASN n 1 141 ILE n 1 142 SER n 1 143 TRP n 1 144 ASP n 1 145 GLY n 1 146 GLU n 1 147 LYS n 1 148 THR n 1 149 VAL n 1 150 MET n 1 151 ILE n 1 152 THR n 1 153 CYS n 1 154 SER n 1 155 PHE n 1 156 THR n 1 157 PRO n 1 158 GLY n 1 159 SER n 1 160 VAL n 1 161 SER n 1 162 LEU n 1 163 THR n 1 164 ALA n 1 165 TYR n 1 166 LYS n 1 167 LEU n 1 168 THR n 1 169 PRO n 1 170 SER n 1 171 GLY n 1 172 TYR n 1 173 GLU n 1 174 TRP n 1 175 GLY n 1 176 LYS n 1 177 ALA n 1 178 ASN n 1 179 THR n 1 180 ASP n 1 181 LYS n 1 182 GLY n 1 183 ASN n 1 184 ASN n 1 185 PRO n 1 186 LYS n 1 187 GLY n 1 188 TYR n 1 189 MET n 1 190 PRO n 1 191 THR n 1 192 HIS n 1 193 TYR n 1 194 GLU n 1 195 LYS n 1 196 VAL n 1 197 GLN n 1 198 MET n 1 199 LEU n 1 200 LEU n 1 201 SER n 1 202 ASP n 1 203 ARG n 1 204 PHE n 1 205 LEU n 1 206 GLY n 1 207 TYR n 1 208 PHE n 1 209 MET n 1 210 VAL n 1 211 PRO n 1 212 SER n 1 213 ASN n 1 214 GLY n 1 215 VAL n 1 216 TRP n 1 217 ASN n 1 218 TYR n 1 219 ASN n 1 220 PHE n 1 221 GLN n 1 222 GLY n 1 223 GLN n 1 224 ARG n 1 225 TRP n 1 226 SER n 1 227 PRO n 1 228 ALA n 1 229 MET n 1 230 LYS n 1 231 PHE n 1 232 ASP n 1 233 VAL n 1 234 CYS n 1 235 LEU n 1 236 SER n 1 237 ASN n 1 238 PRO n 1 239 LYS n 1 240 GLU n 1 241 TYR n 1 242 TYR n 1 243 HIS n 1 244 GLU n 1 245 ASP n 1 246 HIS n 1 247 ARG n 1 248 PRO n 1 249 VAL n 1 250 HIS n 1 251 PHE n 1 252 HIS n 1 253 ASN n 1 254 PHE n 1 255 LYS n 1 256 ALA n 1 257 PHE n 1 258 ASP n 1 259 ASP n 1 260 PRO n 1 261 LEU n 1 262 GLY n 1 263 THR n 1 264 GLY n 1 265 SER n 1 266 ALA n 1 267 ASP n 1 268 ARG n 1 269 GLU n 1 270 ASP n 1 271 ALA n 1 272 PHE n 1 273 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Caenorhabditis _entity_src_gen.pdbx_gene_src_gene prp-8 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Caenorhabditis elegans' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 6239 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain XA90 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pGEX-6p-1 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 THR 1 2057 ? ? ? A . n A 1 2 ALA 2 2058 ? ? ? A . n A 1 3 SER 3 2059 ? ? ? A . n A 1 4 PHE 4 2060 ? ? ? A . n A 1 5 ALA 5 2061 ? ? ? A . n A 1 6 SER 6 2062 2062 SER SER A . n A 1 7 ARG 7 2063 2063 ARG ARG A . n A 1 8 THR 8 2064 2064 THR THR A . n A 1 9 GLU 9 2065 2065 GLU GLU A . n A 1 10 TRP 10 2066 2066 TRP TRP A . n A 1 11 ARG 11 2067 2067 ARG ARG A . n A 1 12 VAL 12 2068 2068 VAL VAL A . n A 1 13 ARG 13 2069 2069 ARG ARG A . n A 1 14 ALA 14 2070 2070 ALA ALA A . n A 1 15 ILE 15 2071 2071 ILE ILE A . n A 1 16 SER 16 2072 2072 SER SER A . n A 1 17 SER 17 2073 2073 SER SER A . n A 1 18 THR 18 2074 2074 THR THR A . n A 1 19 ASN 19 2075 2075 ASN ASN A . n A 1 20 LEU 20 2076 2076 LEU LEU A . n A 1 21 HIS 21 2077 2077 HIS HIS A . n A 1 22 LEU 22 2078 2078 LEU LEU A . n A 1 23 ARG 23 2079 2079 ARG ARG A . n A 1 24 THR 24 2080 2080 THR THR A . n A 1 25 GLN 25 2081 2081 GLN GLN A . n A 1 26 HIS 26 2082 2082 HIS HIS A . n A 1 27 ILE 27 2083 2083 ILE ILE A . n A 1 28 TYR 28 2084 2084 TYR TYR A . n A 1 29 VAL 29 2085 2085 VAL VAL A . n A 1 30 ASN 30 2086 2086 ASN ASN A . n A 1 31 SER 31 2087 2087 SER SER A . n A 1 32 ASP 32 2088 2088 ASP ASP A . n A 1 33 ASP 33 2089 2089 ASP ASP A . n A 1 34 VAL 34 2090 2090 VAL VAL A . n A 1 35 LYS 35 2091 2091 LYS LYS A . n A 1 36 ASP 36 2092 2092 ASP ASP A . n A 1 37 THR 37 2093 2093 THR THR A . n A 1 38 GLY 38 2094 2094 GLY GLY A . n A 1 39 TYR 39 2095 2095 TYR TYR A . n A 1 40 THR 40 2096 2096 THR THR A . n A 1 41 TYR 41 2097 2097 TYR TYR A . n A 1 42 ILE 42 2098 2098 ILE ILE A . n A 1 43 LEU 43 2099 2099 LEU LEU A . n A 1 44 PRO 44 2100 2100 PRO PRO A . n A 1 45 LYS 45 2101 2101 LYS LYS A . n A 1 46 ASN 46 2102 2102 ASN ASN A . n A 1 47 ILE 47 2103 2103 ILE ILE A . n A 1 48 LEU 48 2104 2104 LEU LEU A . n A 1 49 LYS 49 2105 2105 LYS LYS A . n A 1 50 LYS 50 2106 2106 LYS LYS A . n A 1 51 PHE 51 2107 2107 PHE PHE A . n A 1 52 ILE 52 2108 2108 ILE ILE A . n A 1 53 THR 53 2109 2109 THR THR A . n A 1 54 ILE 54 2110 2110 ILE ILE A . n A 1 55 SER 55 2111 2111 SER SER A . n A 1 56 ASP 56 2112 2112 ASP ASP A . n A 1 57 LEU 57 2113 2113 LEU LEU A . n A 1 58 ARG 58 2114 2114 ARG ARG A . n A 1 59 THR 59 2115 2115 THR THR A . n A 1 60 GLN 60 2116 2116 GLN GLN A . n A 1 61 ILE 61 2117 2117 ILE ILE A . n A 1 62 ALA 62 2118 2118 ALA ALA A . n A 1 63 GLY 63 2119 2119 GLY GLY A . n A 1 64 PHE 64 2120 2120 PHE PHE A . n A 1 65 MET 65 2121 2121 MET MET A . n A 1 66 TYR 66 2122 2122 TYR TYR A . n A 1 67 GLY 67 2123 2123 GLY GLY A . n A 1 68 VAL 68 2124 2124 VAL VAL A . n A 1 69 SER 69 2125 2125 SER SER A . n A 1 70 PRO 70 2126 2126 PRO PRO A . n A 1 71 PRO 71 2127 2127 PRO PRO A . n A 1 72 ASP 72 2128 2128 ASP ASP A . n A 1 73 ASN 73 2129 2129 ASN ASN A . n A 1 74 PRO 74 2130 2130 PRO PRO A . n A 1 75 GLN 75 2131 2131 GLN GLN A . n A 1 76 VAL 76 2132 2132 VAL VAL A . n A 1 77 LYS 77 2133 2133 LYS LYS A . n A 1 78 GLU 78 2134 2134 GLU GLU A . n A 1 79 ILE 79 2135 2135 ILE ILE A . n A 1 80 ARG 80 2136 2136 ARG ARG A . n A 1 81 CYS 81 2137 2137 CYS CYS A . n A 1 82 ILE 82 2138 2138 ILE ILE A . n A 1 83 VAL 83 2139 2139 VAL VAL A . n A 1 84 LEU 84 2140 2140 LEU LEU A . n A 1 85 VAL 85 2141 2141 VAL VAL A . n A 1 86 PRO 86 2142 2142 PRO PRO A . n A 1 87 GLN 87 2143 2143 GLN GLN A . n A 1 88 THR 88 2144 2144 THR THR A . n A 1 89 GLY 89 2145 2145 GLY GLY A . n A 1 90 SER 90 2146 2146 SER SER A . n A 1 91 HIS 91 2147 2147 HIS HIS A . n A 1 92 GLN 92 2148 2148 GLN GLN A . n A 1 93 GLN 93 2149 2149 GLN GLN A . n A 1 94 VAL 94 2150 2150 VAL VAL A . n A 1 95 ASN 95 2151 2151 ASN ASN A . n A 1 96 LEU 96 2152 2152 LEU LEU A . n A 1 97 PRO 97 2153 2153 PRO PRO A . n A 1 98 THR 98 2154 2154 THR THR A . n A 1 99 GLN 99 2155 2155 GLN GLN A . n A 1 100 LEU 100 2156 2156 LEU LEU A . n A 1 101 PRO 101 2157 2157 PRO PRO A . n A 1 102 ASP 102 2158 2158 ASP ASP A . n A 1 103 HIS 103 2159 2159 HIS HIS A . n A 1 104 GLU 104 2160 2160 GLU GLU A . n A 1 105 LEU 105 2161 2161 LEU LEU A . n A 1 106 LEU 106 2162 2162 LEU LEU A . n A 1 107 ARG 107 2163 2163 ARG ARG A . n A 1 108 ASP 108 2164 2164 ASP ASP A . n A 1 109 PHE 109 2165 2165 PHE PHE A . n A 1 110 GLU 110 2166 2166 GLU GLU A . n A 1 111 PRO 111 2167 2167 PRO PRO A . n A 1 112 LEU 112 2168 2168 LEU LEU A . n A 1 113 GLY 113 2169 2169 GLY GLY A . n A 1 114 TRP 114 2170 2170 TRP TRP A . n A 1 115 MET 115 2171 2171 MET MET A . n A 1 116 HIS 116 2172 2172 HIS HIS A . n A 1 117 THR 117 2173 2173 THR THR A . n A 1 118 GLN 118 2174 2174 GLN GLN A . n A 1 119 PRO 119 2175 2175 PRO PRO A . n A 1 120 ASN 120 2176 2176 ASN ASN A . n A 1 121 GLU 121 2177 2177 GLU GLU A . n A 1 122 LEU 122 2178 2178 LEU LEU A . n A 1 123 PRO 123 2179 2179 PRO PRO A . n A 1 124 GLN 124 2180 2180 GLN GLN A . n A 1 125 LEU 125 2181 2181 LEU LEU A . n A 1 126 SER 126 2182 2182 SER SER A . n A 1 127 PRO 127 2183 2183 PRO PRO A . n A 1 128 GLN 128 2184 2184 GLN GLN A . n A 1 129 ASP 129 2185 2185 ASP ASP A . n A 1 130 VAL 130 2186 2186 VAL VAL A . n A 1 131 THR 131 2187 2187 THR THR A . n A 1 132 THR 132 2188 2188 THR THR A . n A 1 133 HIS 133 2189 2189 HIS HIS A . n A 1 134 ALA 134 2190 2190 ALA ALA A . n A 1 135 LYS 135 2191 2191 LYS LYS A . n A 1 136 LEU 136 2192 2192 LEU LEU A . n A 1 137 LEU 137 2193 2193 LEU LEU A . n A 1 138 THR 138 2194 2194 THR THR A . n A 1 139 ASP 139 2195 2195 ASP ASP A . n A 1 140 ASN 140 2196 2196 ASN ASN A . n A 1 141 ILE 141 2197 2197 ILE ILE A . n A 1 142 SER 142 2198 2198 SER SER A . n A 1 143 TRP 143 2199 2199 TRP TRP A . n A 1 144 ASP 144 2200 2200 ASP ASP A . n A 1 145 GLY 145 2201 2201 GLY GLY A . n A 1 146 GLU 146 2202 2202 GLU GLU A . n A 1 147 LYS 147 2203 2203 LYS LYS A . n A 1 148 THR 148 2204 2204 THR THR A . n A 1 149 VAL 149 2205 2205 VAL VAL A . n A 1 150 MET 150 2206 2206 MET MET A . n A 1 151 ILE 151 2207 2207 ILE ILE A . n A 1 152 THR 152 2208 2208 THR THR A . n A 1 153 CYS 153 2209 2209 CYS CYS A . n A 1 154 SER 154 2210 2210 SER SER A . n A 1 155 PHE 155 2211 2211 PHE PHE A . n A 1 156 THR 156 2212 2212 THR THR A . n A 1 157 PRO 157 2213 2213 PRO PRO A . n A 1 158 GLY 158 2214 2214 GLY GLY A . n A 1 159 SER 159 2215 2215 SER SER A . n A 1 160 VAL 160 2216 2216 VAL VAL A . n A 1 161 SER 161 2217 2217 SER SER A . n A 1 162 LEU 162 2218 2218 LEU LEU A . n A 1 163 THR 163 2219 2219 THR THR A . n A 1 164 ALA 164 2220 2220 ALA ALA A . n A 1 165 TYR 165 2221 2221 TYR TYR A . n A 1 166 LYS 166 2222 2222 LYS LYS A . n A 1 167 LEU 167 2223 2223 LEU LEU A . n A 1 168 THR 168 2224 2224 THR THR A . n A 1 169 PRO 169 2225 2225 PRO PRO A . n A 1 170 SER 170 2226 2226 SER SER A . n A 1 171 GLY 171 2227 2227 GLY GLY A . n A 1 172 TYR 172 2228 2228 TYR TYR A . n A 1 173 GLU 173 2229 2229 GLU GLU A . n A 1 174 TRP 174 2230 2230 TRP TRP A . n A 1 175 GLY 175 2231 2231 GLY GLY A . n A 1 176 LYS 176 2232 2232 LYS LYS A . n A 1 177 ALA 177 2233 2233 ALA ALA A . n A 1 178 ASN 178 2234 2234 ASN ASN A . n A 1 179 THR 179 2235 2235 THR THR A . n A 1 180 ASP 180 2236 2236 ASP ASP A . n A 1 181 LYS 181 2237 2237 LYS LYS A . n A 1 182 GLY 182 2238 2238 GLY GLY A . n A 1 183 ASN 183 2239 2239 ASN ASN A . n A 1 184 ASN 184 2240 2240 ASN ASN A . n A 1 185 PRO 185 2241 2241 PRO PRO A . n A 1 186 LYS 186 2242 2242 LYS LYS A . n A 1 187 GLY 187 2243 2243 GLY GLY A . n A 1 188 TYR 188 2244 2244 TYR TYR A . n A 1 189 MET 189 2245 2245 MET MET A . n A 1 190 PRO 190 2246 2246 PRO PRO A . n A 1 191 THR 191 2247 2247 THR THR A . n A 1 192 HIS 192 2248 2248 HIS HIS A . n A 1 193 TYR 193 2249 2249 TYR TYR A . n A 1 194 GLU 194 2250 2250 GLU GLU A . n A 1 195 LYS 195 2251 2251 LYS LYS A . n A 1 196 VAL 196 2252 2252 VAL VAL A . n A 1 197 GLN 197 2253 2253 GLN GLN A . n A 1 198 MET 198 2254 2254 MET MET A . n A 1 199 LEU 199 2255 2255 LEU LEU A . n A 1 200 LEU 200 2256 2256 LEU LEU A . n A 1 201 SER 201 2257 2257 SER SER A . n A 1 202 ASP 202 2258 2258 ASP ASP A . n A 1 203 ARG 203 2259 2259 ARG ARG A . n A 1 204 PHE 204 2260 2260 PHE PHE A . n A 1 205 LEU 205 2261 2261 LEU LEU A . n A 1 206 GLY 206 2262 2262 GLY GLY A . n A 1 207 TYR 207 2263 2263 TYR TYR A . n A 1 208 PHE 208 2264 2264 PHE PHE A . n A 1 209 MET 209 2265 2265 MET MET A . n A 1 210 VAL 210 2266 2266 VAL VAL A . n A 1 211 PRO 211 2267 2267 PRO PRO A . n A 1 212 SER 212 2268 2268 SER SER A . n A 1 213 ASN 213 2269 2269 ASN ASN A . n A 1 214 GLY 214 2270 2270 GLY GLY A . n A 1 215 VAL 215 2271 2271 VAL VAL A . n A 1 216 TRP 216 2272 2272 TRP TRP A . n A 1 217 ASN 217 2273 2273 ASN ASN A . n A 1 218 TYR 218 2274 2274 TYR TYR A . n A 1 219 ASN 219 2275 2275 ASN ASN A . n A 1 220 PHE 220 2276 2276 PHE PHE A . n A 1 221 GLN 221 2277 2277 GLN GLN A . n A 1 222 GLY 222 2278 2278 GLY GLY A . n A 1 223 GLN 223 2279 2279 GLN GLN A . n A 1 224 ARG 224 2280 2280 ARG ARG A . n A 1 225 TRP 225 2281 2281 TRP TRP A . n A 1 226 SER 226 2282 2282 SER SER A . n A 1 227 PRO 227 2283 2283 PRO PRO A . n A 1 228 ALA 228 2284 2284 ALA ALA A . n A 1 229 MET 229 2285 2285 MET MET A . n A 1 230 LYS 230 2286 2286 LYS LYS A . n A 1 231 PHE 231 2287 2287 PHE PHE A . n A 1 232 ASP 232 2288 2288 ASP ASP A . n A 1 233 VAL 233 2289 2289 VAL VAL A . n A 1 234 CYS 234 2290 2290 CYS CYS A . n A 1 235 LEU 235 2291 2291 LEU LEU A . n A 1 236 SER 236 2292 2292 SER SER A . n A 1 237 ASN 237 2293 2293 ASN ASN A . n A 1 238 PRO 238 2294 2294 PRO PRO A . n A 1 239 LYS 239 2295 2295 LYS LYS A . n A 1 240 GLU 240 2296 2296 GLU GLU A . n A 1 241 TYR 241 2297 2297 TYR TYR A . n A 1 242 TYR 242 2298 2298 TYR TYR A . n A 1 243 HIS 243 2299 2299 HIS HIS A . n A 1 244 GLU 244 2300 2300 GLU GLU A . n A 1 245 ASP 245 2301 2301 ASP ASP A . n A 1 246 HIS 246 2302 2302 HIS HIS A . n A 1 247 ARG 247 2303 2303 ARG ARG A . n A 1 248 PRO 248 2304 2304 PRO PRO A . n A 1 249 VAL 249 2305 2305 VAL VAL A . n A 1 250 HIS 250 2306 2306 HIS HIS A . n A 1 251 PHE 251 2307 2307 PHE PHE A . n A 1 252 HIS 252 2308 ? ? ? A . n A 1 253 ASN 253 2309 ? ? ? A . n A 1 254 PHE 254 2310 ? ? ? A . n A 1 255 LYS 255 2311 ? ? ? A . n A 1 256 ALA 256 2312 ? ? ? A . n A 1 257 PHE 257 2313 ? ? ? A . n A 1 258 ASP 258 2314 ? ? ? A . n A 1 259 ASP 259 2315 ? ? ? A . n A 1 260 PRO 260 2316 ? ? ? A . n A 1 261 LEU 261 2317 ? ? ? A . n A 1 262 GLY 262 2318 ? ? ? A . n A 1 263 THR 263 2319 ? ? ? A . n A 1 264 GLY 264 2320 ? ? ? A . n A 1 265 SER 265 2321 ? ? ? A . n A 1 266 ALA 266 2322 ? ? ? A . n A 1 267 ASP 267 2323 ? ? ? A . n A 1 268 ARG 268 2324 ? ? ? A . n A 1 269 GLU 269 2325 ? ? ? A . n A 1 270 ASP 270 2326 ? ? ? A . n A 1 271 ALA 271 2327 ? ? ? A . n A 1 272 PHE 272 2328 ? ? ? A . n A 1 273 ALA 273 2329 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 1 1 HOH HOH A . B 2 HOH 2 2 2 HOH HOH A . B 2 HOH 3 3 3 HOH HOH A . B 2 HOH 4 4 4 HOH HOH A . B 2 HOH 5 5 5 HOH HOH A . B 2 HOH 6 6 6 HOH HOH A . B 2 HOH 7 7 7 HOH HOH A . B 2 HOH 8 8 8 HOH HOH A . B 2 HOH 9 9 9 HOH HOH A . B 2 HOH 10 10 10 HOH HOH A . B 2 HOH 11 11 11 HOH HOH A . B 2 HOH 12 12 12 HOH HOH A . B 2 HOH 13 13 13 HOH HOH A . B 2 HOH 14 14 14 HOH HOH A . B 2 HOH 15 15 15 HOH HOH A . B 2 HOH 16 16 16 HOH HOH A . B 2 HOH 17 17 17 HOH HOH A . B 2 HOH 18 18 18 HOH HOH A . B 2 HOH 19 19 19 HOH HOH A . B 2 HOH 20 20 20 HOH HOH A . B 2 HOH 21 21 21 HOH HOH A . B 2 HOH 22 22 22 HOH HOH A . B 2 HOH 23 23 23 HOH HOH A . B 2 HOH 24 24 24 HOH HOH A . B 2 HOH 25 25 25 HOH HOH A . B 2 HOH 26 26 26 HOH HOH A . B 2 HOH 27 27 27 HOH HOH A . B 2 HOH 28 28 28 HOH HOH A . B 2 HOH 29 29 29 HOH HOH A . B 2 HOH 30 30 30 HOH HOH A . B 2 HOH 31 31 31 HOH HOH A . B 2 HOH 32 32 32 HOH HOH A . B 2 HOH 33 33 33 HOH HOH A . B 2 HOH 34 34 34 HOH HOH A . B 2 HOH 35 35 35 HOH HOH A . B 2 HOH 36 36 36 HOH HOH A . B 2 HOH 37 37 37 HOH HOH A . B 2 HOH 38 38 38 HOH HOH A . B 2 HOH 39 39 39 HOH HOH A . B 2 HOH 40 40 40 HOH HOH A . B 2 HOH 41 41 41 HOH HOH A . B 2 HOH 42 42 42 HOH HOH A . B 2 HOH 43 43 43 HOH HOH A . B 2 HOH 44 44 44 HOH HOH A . B 2 HOH 45 45 45 HOH HOH A . B 2 HOH 46 46 46 HOH HOH A . B 2 HOH 47 47 47 HOH HOH A . B 2 HOH 48 48 48 HOH HOH A . B 2 HOH 49 49 49 HOH HOH A . B 2 HOH 50 50 50 HOH HOH A . B 2 HOH 51 51 51 HOH HOH A . B 2 HOH 52 52 52 HOH HOH A . B 2 HOH 53 53 53 HOH HOH A . B 2 HOH 54 54 54 HOH HOH A . B 2 HOH 55 55 55 HOH HOH A . B 2 HOH 56 56 56 HOH HOH A . B 2 HOH 57 57 57 HOH HOH A . B 2 HOH 58 58 58 HOH HOH A . B 2 HOH 59 59 59 HOH HOH A . B 2 HOH 60 60 60 HOH HOH A . B 2 HOH 61 61 61 HOH HOH A . B 2 HOH 62 62 62 HOH HOH A . B 2 HOH 63 63 63 HOH HOH A . B 2 HOH 64 64 64 HOH HOH A . B 2 HOH 65 65 65 HOH HOH A . B 2 HOH 66 66 66 HOH HOH A . B 2 HOH 67 67 67 HOH HOH A . B 2 HOH 68 68 68 HOH HOH A . B 2 HOH 69 69 69 HOH HOH A . B 2 HOH 70 70 70 HOH HOH A . B 2 HOH 71 71 71 HOH HOH A . B 2 HOH 72 72 72 HOH HOH A . B 2 HOH 73 73 73 HOH HOH A . B 2 HOH 74 74 74 HOH HOH A . B 2 HOH 75 75 75 HOH HOH A . B 2 HOH 76 76 76 HOH HOH A . B 2 HOH 77 77 77 HOH HOH A . B 2 HOH 78 78 78 HOH HOH A . B 2 HOH 79 79 79 HOH HOH A . B 2 HOH 80 80 80 HOH HOH A . B 2 HOH 81 81 81 HOH HOH A . B 2 HOH 82 82 82 HOH HOH A . B 2 HOH 83 83 83 HOH HOH A . B 2 HOH 84 84 84 HOH HOH A . B 2 HOH 85 85 85 HOH HOH A . B 2 HOH 86 86 86 HOH HOH A . B 2 HOH 87 87 87 HOH HOH A . B 2 HOH 88 88 88 HOH HOH A . B 2 HOH 89 89 89 HOH HOH A . B 2 HOH 90 90 90 HOH HOH A . B 2 HOH 91 91 91 HOH HOH A . B 2 HOH 92 92 92 HOH HOH A . B 2 HOH 93 93 93 HOH HOH A . B 2 HOH 94 94 94 HOH HOH A . B 2 HOH 95 95 95 HOH HOH A . B 2 HOH 96 96 96 HOH HOH A . B 2 HOH 97 97 97 HOH HOH A . B 2 HOH 98 98 98 HOH HOH A . B 2 HOH 99 99 99 HOH HOH A . B 2 HOH 100 100 100 HOH HOH A . B 2 HOH 101 101 101 HOH HOH A . B 2 HOH 102 102 102 HOH HOH A . B 2 HOH 103 103 103 HOH HOH A . B 2 HOH 104 104 104 HOH HOH A . B 2 HOH 105 105 105 HOH HOH A . B 2 HOH 106 106 106 HOH HOH A . B 2 HOH 107 107 107 HOH HOH A . B 2 HOH 108 108 108 HOH HOH A . B 2 HOH 109 109 109 HOH HOH A . B 2 HOH 110 110 110 HOH HOH A . B 2 HOH 111 111 111 HOH HOH A . B 2 HOH 112 112 112 HOH HOH A . B 2 HOH 113 113 113 HOH HOH A . B 2 HOH 114 114 114 HOH HOH A . B 2 HOH 115 115 115 HOH HOH A . B 2 HOH 116 116 116 HOH HOH A . B 2 HOH 117 117 117 HOH HOH A . B 2 HOH 118 118 118 HOH HOH A . B 2 HOH 119 119 119 HOH HOH A . B 2 HOH 120 120 120 HOH HOH A . B 2 HOH 121 121 121 HOH HOH A . # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal CNS . ? package 'Axel T. Brunger' axel.brunger@yale.edu refinement http://cns.csb.yale.edu/v1.1/ Fortran_77 ? 1 PDB_EXTRACT 2.000 'April. 3, 2006' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 2 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 3 HKL-2000 . ? ? ? ? 'data scaling' ? ? ? 4 SOLVE . ? ? ? ? phasing ? ? ? 5 # _cell.length_a 65.063 _cell.length_b 65.063 _cell.length_c 135.552 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 2P87 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.entry_id 2P87 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 92 _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # _exptl.crystals_number 2 _exptl.entry_id 2P87 _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.30 _exptl_crystal.density_percent_sol 46.47 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 7. _exptl_crystal_grow.temp 298 _exptl_crystal_grow.pdbx_details '0.1M Hepes pH7, 14% PEK4K, 0.2M MgCl2, pH 7., VAPOR DIFFUSION, HANGING DROP, temperature 298K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # loop_ _diffrn.id _diffrn.ambient_temp _diffrn.ambient_temp_details _diffrn.crystal_id 1 100 ? 1 2 ? ? 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type ? _diffrn_detector.pdbx_collection_date 2006-05-08 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 1.0 1.0 2 0.9795 1.0 # loop_ _diffrn_source.diffrn_id _diffrn_source.source _diffrn_source.type _diffrn_source.pdbx_wavelength _diffrn_source.pdbx_wavelength_list _diffrn_source.pdbx_synchrotron_site _diffrn_source.pdbx_synchrotron_beamline 1 SYNCHROTRON 'NSLS BEAMLINE X26C' ? 1.0 NSLS X26C 2 SYNCHROTRON 'NSLS BEAMLINE X26C' ? 0.9795 NSLS X26C # _reflns.entry_id 2P87 _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.d_resolution_high 2.30 _reflns.d_resolution_low 50 _reflns.number_all 25097 _reflns.number_obs 23240 _reflns.percent_possible_obs 92.6 _reflns.pdbx_Rmerge_I_obs 0.051 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 18.4 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 2.2 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.30 _reflns_shell.d_res_low 2.38 _reflns_shell.percent_possible_obs ? _reflns_shell.percent_possible_all 96.2 _reflns_shell.Rmerge_I_obs 0.274 _reflns_shell.meanI_over_sigI_obs 3.6 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_redundancy 2.1 _reflns_shell.number_unique_all 2418 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 2P87 _refine.ls_d_res_high 2.300 _refine.ls_d_res_low 50.000 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 89.900 _refine.ls_number_reflns_obs 12233 _refine.ls_R_factor_R_work 0.226 _refine.ls_R_factor_R_free 0.249 _refine.ls_percent_reflns_R_free 8.800 _refine.ls_number_reflns_R_free 1199 _refine.B_iso_mean 35.409 _refine.solvent_model_param_bsol 34.888 _refine.aniso_B[1][1] -2.476 _refine.aniso_B[2][2] -2.476 _refine.aniso_B[3][3] 4.953 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details random _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.details ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1997 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 121 _refine_hist.number_atoms_total 2118 _refine_hist.d_res_high 2.300 _refine_hist.d_res_low 50.000 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d ? 0.008 ? ? 'X-RAY DIFFRACTION' ? c_angle_deg ? 1.408 ? ? 'X-RAY DIFFRACTION' ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 CNS_TOPPAR:protein_rep.param ? 'X-RAY DIFFRACTION' 2 CNS_TOPPAR:water.param ? 'X-RAY DIFFRACTION' # _struct.entry_id 2P87 _struct.title 'Crystal structure of the C-terminal domain of C. elegans pre-mRNA splicing factor Prp8' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2P87 _struct_keywords.pdbx_keywords SPLICING _struct_keywords.text 'alpha-beta, SPLICING' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name UNP _struct_ref.db_code PRP8_CAEEL _struct_ref.pdbx_db_accession P34369 _struct_ref.pdbx_seq_one_letter_code ;TASFASRTEWRVRAISSTNLHLRTQHIYVNSDDVKDTGYTYILPKNILKKFITISDLRTQIAGFMYGVSPPDNPQVKEIR CIVLVPQTGSHQQVNLPTQLPDHELLRDFEPLGWMHTQPNELPQLSPQDVTTHAKLLTDNISWDGEKTVMITCSFTPGSV SLTAYKLTPSGYEWGKANTDKGNNPKGYMPTHYEKVQMLLSDRFLGYFMVPSNGVWNYNFQGQRWSPAMKFDVCLSNPKE YYHEDHRPVHFHNFKAFDDPLGTGSADREDAFA ; _struct_ref.pdbx_align_begin 2057 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2P87 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 273 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P34369 _struct_ref_seq.db_align_beg 2057 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 2329 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2057 _struct_ref_seq.pdbx_auth_seq_align_end 2329 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 6 ? THR A 18 ? SER A 2062 THR A 2074 1 ? 13 HELX_P HELX_P2 2 ASN A 19 ? GLN A 25 ? ASN A 2075 GLN A 2081 5 ? 7 HELX_P HELX_P3 3 LYS A 45 ? ILE A 54 ? LYS A 2101 ILE A 2110 1 ? 10 HELX_P HELX_P4 4 SER A 126 ? ASN A 140 ? SER A 2182 ASN A 2196 1 ? 15 HELX_P HELX_P5 5 THR A 168 ? ASN A 178 ? THR A 2224 ASN A 2234 1 ? 11 HELX_P HELX_P6 6 MET A 189 ? THR A 191 ? MET A 2245 THR A 2247 5 ? 3 HELX_P HELX_P7 7 GLN A 221 ? TRP A 225 ? GLN A 2277 TRP A 2281 5 ? 5 HELX_P HELX_P8 8 HIS A 243 ? ARG A 247 ? HIS A 2299 ARG A 2303 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 8 ? B ? 7 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? anti-parallel A 3 4 ? parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? parallel A 7 8 ? anti-parallel B 1 2 ? parallel B 2 3 ? anti-parallel B 3 4 ? parallel B 4 5 ? parallel B 5 6 ? parallel B 6 7 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 27 ? VAL A 29 ? ILE A 2083 VAL A 2085 A 2 SER A 159 ? LEU A 167 ? SER A 2215 LEU A 2223 A 3 VAL A 149 ? THR A 156 ? VAL A 2205 THR A 2212 A 4 GLU A 110 ? GLN A 118 ? GLU A 2166 GLN A 2174 A 5 ALA A 62 ? VAL A 68 ? ALA A 2118 VAL A 2124 A 6 VAL A 76 ? VAL A 83 ? VAL A 2132 VAL A 2139 A 7 TYR A 207 ? PRO A 211 ? TYR A 2263 PRO A 2267 A 8 VAL A 233 ? LEU A 235 ? VAL A 2289 LEU A 2291 B 1 ILE A 27 ? VAL A 29 ? ILE A 2083 VAL A 2085 B 2 SER A 159 ? LEU A 167 ? SER A 2215 LEU A 2223 B 3 TYR A 193 ? SER A 201 ? TYR A 2249 SER A 2257 B 4 THR A 40 ? PRO A 44 ? THR A 2096 PRO A 2100 B 5 VAL A 76 ? VAL A 83 ? VAL A 2132 VAL A 2139 B 6 TYR A 207 ? PRO A 211 ? TYR A 2263 PRO A 2267 B 7 VAL A 233 ? LEU A 235 ? VAL A 2289 LEU A 2291 C 1 THR A 88 ? GLY A 89 ? THR A 2144 GLY A 2145 C 2 VAL A 94 ? ASN A 95 ? VAL A 2150 ASN A 2151 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N TYR A 28 ? N TYR A 2084 O LEU A 162 ? O LEU A 2218 A 2 3 O SER A 159 ? O SER A 2215 N THR A 156 ? N THR A 2212 A 3 4 O PHE A 155 ? O PHE A 2211 N GLN A 118 ? N GLN A 2174 A 4 5 O GLY A 113 ? O GLY A 2169 N MET A 65 ? N MET A 2121 A 5 6 N PHE A 64 ? N PHE A 2120 O VAL A 83 ? O VAL A 2139 A 6 7 N ARG A 80 ? N ARG A 2136 O TYR A 207 ? O TYR A 2263 A 7 8 N VAL A 210 ? N VAL A 2266 O CYS A 234 ? O CYS A 2290 B 1 2 N TYR A 28 ? N TYR A 2084 O LEU A 162 ? O LEU A 2218 B 2 3 N LYS A 166 ? N LYS A 2222 O GLU A 194 ? O GLU A 2250 B 3 4 O LEU A 199 ? O LEU A 2255 N TYR A 41 ? N TYR A 2097 B 4 5 N THR A 40 ? N THR A 2096 O LYS A 77 ? O LYS A 2133 B 5 6 N ARG A 80 ? N ARG A 2136 O TYR A 207 ? O TYR A 2263 B 6 7 N VAL A 210 ? N VAL A 2266 O CYS A 234 ? O CYS A 2290 C 1 2 N THR A 88 ? N THR A 2144 O ASN A 95 ? O ASN A 2151 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OD1 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 ASP _pdbx_validate_close_contact.auth_seq_id_1 2288 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 61 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.16 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 2215 ? ? -163.56 -169.78 2 1 ASN A 2240 ? ? -148.56 40.92 3 1 PRO A 2241 ? ? -47.83 152.92 4 1 GLN A 2277 ? ? -145.31 38.46 5 1 SER A 2292 ? ? 177.84 159.84 6 1 HIS A 2306 ? ? -177.22 145.70 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A THR 2057 ? A THR 1 2 1 Y 1 A ALA 2058 ? A ALA 2 3 1 Y 1 A SER 2059 ? A SER 3 4 1 Y 1 A PHE 2060 ? A PHE 4 5 1 Y 1 A ALA 2061 ? A ALA 5 6 1 Y 1 A HIS 2308 ? A HIS 252 7 1 Y 1 A ASN 2309 ? A ASN 253 8 1 Y 1 A PHE 2310 ? A PHE 254 9 1 Y 1 A LYS 2311 ? A LYS 255 10 1 Y 1 A ALA 2312 ? A ALA 256 11 1 Y 1 A PHE 2313 ? A PHE 257 12 1 Y 1 A ASP 2314 ? A ASP 258 13 1 Y 1 A ASP 2315 ? A ASP 259 14 1 Y 1 A PRO 2316 ? A PRO 260 15 1 Y 1 A LEU 2317 ? A LEU 261 16 1 Y 1 A GLY 2318 ? A GLY 262 17 1 Y 1 A THR 2319 ? A THR 263 18 1 Y 1 A GLY 2320 ? A GLY 264 19 1 Y 1 A SER 2321 ? A SER 265 20 1 Y 1 A ALA 2322 ? A ALA 266 21 1 Y 1 A ASP 2323 ? A ASP 267 22 1 Y 1 A ARG 2324 ? A ARG 268 23 1 Y 1 A GLU 2325 ? A GLU 269 24 1 Y 1 A ASP 2326 ? A ASP 270 25 1 Y 1 A ALA 2327 ? A ALA 271 26 1 Y 1 A PHE 2328 ? A PHE 272 27 1 Y 1 A ALA 2329 ? A ALA 273 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SER N N N N 290 SER CA C N S 291 SER C C N N 292 SER O O N N 293 SER CB C N N 294 SER OG O N N 295 SER OXT O N N 296 SER H H N N 297 SER H2 H N N 298 SER HA H N N 299 SER HB2 H N N 300 SER HB3 H N N 301 SER HG H N N 302 SER HXT H N N 303 THR N N N N 304 THR CA C N S 305 THR C C N N 306 THR O O N N 307 THR CB C N R 308 THR OG1 O N N 309 THR CG2 C N N 310 THR OXT O N N 311 THR H H N N 312 THR H2 H N N 313 THR HA H N N 314 THR HB H N N 315 THR HG1 H N N 316 THR HG21 H N N 317 THR HG22 H N N 318 THR HG23 H N N 319 THR HXT H N N 320 TRP N N N N 321 TRP CA C N S 322 TRP C C N N 323 TRP O O N N 324 TRP CB C N N 325 TRP CG C Y N 326 TRP CD1 C Y N 327 TRP CD2 C Y N 328 TRP NE1 N Y N 329 TRP CE2 C Y N 330 TRP CE3 C Y N 331 TRP CZ2 C Y N 332 TRP CZ3 C Y N 333 TRP CH2 C Y N 334 TRP OXT O N N 335 TRP H H N N 336 TRP H2 H N N 337 TRP HA H N N 338 TRP HB2 H N N 339 TRP HB3 H N N 340 TRP HD1 H N N 341 TRP HE1 H N N 342 TRP HE3 H N N 343 TRP HZ2 H N N 344 TRP HZ3 H N N 345 TRP HH2 H N N 346 TRP HXT H N N 347 TYR N N N N 348 TYR CA C N S 349 TYR C C N N 350 TYR O O N N 351 TYR CB C N N 352 TYR CG C Y N 353 TYR CD1 C Y N 354 TYR CD2 C Y N 355 TYR CE1 C Y N 356 TYR CE2 C Y N 357 TYR CZ C Y N 358 TYR OH O N N 359 TYR OXT O N N 360 TYR H H N N 361 TYR H2 H N N 362 TYR HA H N N 363 TYR HB2 H N N 364 TYR HB3 H N N 365 TYR HD1 H N N 366 TYR HD2 H N N 367 TYR HE1 H N N 368 TYR HE2 H N N 369 TYR HH H N N 370 TYR HXT H N N 371 VAL N N N N 372 VAL CA C N S 373 VAL C C N N 374 VAL O O N N 375 VAL CB C N N 376 VAL CG1 C N N 377 VAL CG2 C N N 378 VAL OXT O N N 379 VAL H H N N 380 VAL H2 H N N 381 VAL HA H N N 382 VAL HB H N N 383 VAL HG11 H N N 384 VAL HG12 H N N 385 VAL HG13 H N N 386 VAL HG21 H N N 387 VAL HG22 H N N 388 VAL HG23 H N N 389 VAL HXT H N N 390 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TRP N CA sing N N 306 TRP N H sing N N 307 TRP N H2 sing N N 308 TRP CA C sing N N 309 TRP CA CB sing N N 310 TRP CA HA sing N N 311 TRP C O doub N N 312 TRP C OXT sing N N 313 TRP CB CG sing N N 314 TRP CB HB2 sing N N 315 TRP CB HB3 sing N N 316 TRP CG CD1 doub Y N 317 TRP CG CD2 sing Y N 318 TRP CD1 NE1 sing Y N 319 TRP CD1 HD1 sing N N 320 TRP CD2 CE2 doub Y N 321 TRP CD2 CE3 sing Y N 322 TRP NE1 CE2 sing Y N 323 TRP NE1 HE1 sing N N 324 TRP CE2 CZ2 sing Y N 325 TRP CE3 CZ3 doub Y N 326 TRP CE3 HE3 sing N N 327 TRP CZ2 CH2 doub Y N 328 TRP CZ2 HZ2 sing N N 329 TRP CZ3 CH2 sing Y N 330 TRP CZ3 HZ3 sing N N 331 TRP CH2 HH2 sing N N 332 TRP OXT HXT sing N N 333 TYR N CA sing N N 334 TYR N H sing N N 335 TYR N H2 sing N N 336 TYR CA C sing N N 337 TYR CA CB sing N N 338 TYR CA HA sing N N 339 TYR C O doub N N 340 TYR C OXT sing N N 341 TYR CB CG sing N N 342 TYR CB HB2 sing N N 343 TYR CB HB3 sing N N 344 TYR CG CD1 doub Y N 345 TYR CG CD2 sing Y N 346 TYR CD1 CE1 sing Y N 347 TYR CD1 HD1 sing N N 348 TYR CD2 CE2 doub Y N 349 TYR CD2 HD2 sing N N 350 TYR CE1 CZ doub Y N 351 TYR CE1 HE1 sing N N 352 TYR CE2 CZ sing Y N 353 TYR CE2 HE2 sing N N 354 TYR CZ OH sing N N 355 TYR OH HH sing N N 356 TYR OXT HXT sing N N 357 VAL N CA sing N N 358 VAL N H sing N N 359 VAL N H2 sing N N 360 VAL CA C sing N N 361 VAL CA CB sing N N 362 VAL CA HA sing N N 363 VAL C O doub N N 364 VAL C OXT sing N N 365 VAL CB CG1 sing N N 366 VAL CB CG2 sing N N 367 VAL CB HB sing N N 368 VAL CG1 HG11 sing N N 369 VAL CG1 HG12 sing N N 370 VAL CG1 HG13 sing N N 371 VAL CG2 HG21 sing N N 372 VAL CG2 HG22 sing N N 373 VAL CG2 HG23 sing N N 374 VAL OXT HXT sing N N 375 # _atom_sites.entry_id 2P87 _atom_sites.fract_transf_matrix[1][1] 0.015370 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015370 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007377 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_