data_2PC1 # _entry.id 2PC1 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2PC1 pdb_00002pc1 10.2210/pdb2pc1/pdb RCSB RCSB042211 ? ? WWPDB D_1000042211 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 371586 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 2PC1 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2007-03-29 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of acetyltransferase GNAT family (NP_688560.1) from Streptococcus agalactiae 2603 at 1.28 A resolution' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 2PC1 _cell.length_a 35.480 _cell.length_b 37.650 _cell.length_c 41.500 _cell.angle_alpha 94.220 _cell.angle_beta 109.420 _cell.angle_gamma 113.080 _cell.pdbx_unique_axis ? _cell.Z_PDB 1 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2PC1 _symmetry.Int_Tables_number 1 _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Acetyltransferase, GNAT family' 23681.674 1 2.3.1.- ? ? ? 2 non-polymer syn 'SULFATE ION' 96.063 2 ? ? ? ? 3 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 4 water nat water 18.015 179 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)GSDKIHHHHHHENLYFQG(MSE)QIRLAFPNEIDQI(MSE)LLIEEARAEIAKTGSDQWQKEDGYPNRNDIIDDI LNGYAWVGIEDG(MSE)LATYAAVIDGHEEVYDAIYEGKWLHDNHRYLTFHRIAISNQFRGRGLAQTFLQGLIEGHKGPD FRCDTHEKNVT(MSE)QHILNKLGYQYCGKVPLDGVRLAYQKIKEKGETSIYREIDERNP(MSE) ; _entity_poly.pdbx_seq_one_letter_code_can ;MGSDKIHHHHHHENLYFQGMQIRLAFPNEIDQIMLLIEEARAEIAKTGSDQWQKEDGYPNRNDIIDDILNGYAWVGIEDG MLATYAAVIDGHEEVYDAIYEGKWLHDNHRYLTFHRIAISNQFRGRGLAQTFLQGLIEGHKGPDFRCDTHEKNVTMQHIL NKLGYQYCGKVPLDGVRLAYQKIKEKGETSIYREIDERNPM ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier 371586 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 GLY n 1 3 SER n 1 4 ASP n 1 5 LYS n 1 6 ILE n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 HIS n 1 12 HIS n 1 13 GLU n 1 14 ASN n 1 15 LEU n 1 16 TYR n 1 17 PHE n 1 18 GLN n 1 19 GLY n 1 20 MSE n 1 21 GLN n 1 22 ILE n 1 23 ARG n 1 24 LEU n 1 25 ALA n 1 26 PHE n 1 27 PRO n 1 28 ASN n 1 29 GLU n 1 30 ILE n 1 31 ASP n 1 32 GLN n 1 33 ILE n 1 34 MSE n 1 35 LEU n 1 36 LEU n 1 37 ILE n 1 38 GLU n 1 39 GLU n 1 40 ALA n 1 41 ARG n 1 42 ALA n 1 43 GLU n 1 44 ILE n 1 45 ALA n 1 46 LYS n 1 47 THR n 1 48 GLY n 1 49 SER n 1 50 ASP n 1 51 GLN n 1 52 TRP n 1 53 GLN n 1 54 LYS n 1 55 GLU n 1 56 ASP n 1 57 GLY n 1 58 TYR n 1 59 PRO n 1 60 ASN n 1 61 ARG n 1 62 ASN n 1 63 ASP n 1 64 ILE n 1 65 ILE n 1 66 ASP n 1 67 ASP n 1 68 ILE n 1 69 LEU n 1 70 ASN n 1 71 GLY n 1 72 TYR n 1 73 ALA n 1 74 TRP n 1 75 VAL n 1 76 GLY n 1 77 ILE n 1 78 GLU n 1 79 ASP n 1 80 GLY n 1 81 MSE n 1 82 LEU n 1 83 ALA n 1 84 THR n 1 85 TYR n 1 86 ALA n 1 87 ALA n 1 88 VAL n 1 89 ILE n 1 90 ASP n 1 91 GLY n 1 92 HIS n 1 93 GLU n 1 94 GLU n 1 95 VAL n 1 96 TYR n 1 97 ASP n 1 98 ALA n 1 99 ILE n 1 100 TYR n 1 101 GLU n 1 102 GLY n 1 103 LYS n 1 104 TRP n 1 105 LEU n 1 106 HIS n 1 107 ASP n 1 108 ASN n 1 109 HIS n 1 110 ARG n 1 111 TYR n 1 112 LEU n 1 113 THR n 1 114 PHE n 1 115 HIS n 1 116 ARG n 1 117 ILE n 1 118 ALA n 1 119 ILE n 1 120 SER n 1 121 ASN n 1 122 GLN n 1 123 PHE n 1 124 ARG n 1 125 GLY n 1 126 ARG n 1 127 GLY n 1 128 LEU n 1 129 ALA n 1 130 GLN n 1 131 THR n 1 132 PHE n 1 133 LEU n 1 134 GLN n 1 135 GLY n 1 136 LEU n 1 137 ILE n 1 138 GLU n 1 139 GLY n 1 140 HIS n 1 141 LYS n 1 142 GLY n 1 143 PRO n 1 144 ASP n 1 145 PHE n 1 146 ARG n 1 147 CYS n 1 148 ASP n 1 149 THR n 1 150 HIS n 1 151 GLU n 1 152 LYS n 1 153 ASN n 1 154 VAL n 1 155 THR n 1 156 MSE n 1 157 GLN n 1 158 HIS n 1 159 ILE n 1 160 LEU n 1 161 ASN n 1 162 LYS n 1 163 LEU n 1 164 GLY n 1 165 TYR n 1 166 GLN n 1 167 TYR n 1 168 CYS n 1 169 GLY n 1 170 LYS n 1 171 VAL n 1 172 PRO n 1 173 LEU n 1 174 ASP n 1 175 GLY n 1 176 VAL n 1 177 ARG n 1 178 LEU n 1 179 ALA n 1 180 TYR n 1 181 GLN n 1 182 LYS n 1 183 ILE n 1 184 LYS n 1 185 GLU n 1 186 LYS n 1 187 GLY n 1 188 GLU n 1 189 THR n 1 190 SER n 1 191 ILE n 1 192 TYR n 1 193 ARG n 1 194 GLU n 1 195 ILE n 1 196 ASP n 1 197 GLU n 1 198 ARG n 1 199 ASN n 1 200 PRO n 1 201 MSE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Streptococcus _entity_src_gen.pdbx_gene_src_gene 'NP_688560.1, SAG1567' _entity_src_gen.gene_src_species 'Streptococcus agalactiae' _entity_src_gen.gene_src_strain '2603 V/R' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Streptococcus agalactiae 2603V/R' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 208435 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc BAA-611 _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain HK100 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name speedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q8DYC0_STRA5 _struct_ref.pdbx_db_accession Q8DYC0 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MQIRLAFPNEIDQIMLLIEEARAEIAKTGSDQWQKEDGYPNRNDIIDDILNGYAWVGIEDGMLATYAAVIDGHEEVYDAI YEGKWLHDNHRYLTFHRIAISNQFRGRGLAQTFLQGLIEGHKGPDFRCDTHEKNVTMQHILNKLGYQYCGKVPLDGVRLA YQKIKEKGETSIYREIDERNPM ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2PC1 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 20 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 201 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8DYC0 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 182 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 182 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2PC1 MSE A 1 ? UNP Q8DYC0 ? ? 'expression tag' -18 1 1 2PC1 GLY A 2 ? UNP Q8DYC0 ? ? 'expression tag' -17 2 1 2PC1 SER A 3 ? UNP Q8DYC0 ? ? 'expression tag' -16 3 1 2PC1 ASP A 4 ? UNP Q8DYC0 ? ? 'expression tag' -15 4 1 2PC1 LYS A 5 ? UNP Q8DYC0 ? ? 'expression tag' -14 5 1 2PC1 ILE A 6 ? UNP Q8DYC0 ? ? 'expression tag' -13 6 1 2PC1 HIS A 7 ? UNP Q8DYC0 ? ? 'expression tag' -12 7 1 2PC1 HIS A 8 ? UNP Q8DYC0 ? ? 'expression tag' -11 8 1 2PC1 HIS A 9 ? UNP Q8DYC0 ? ? 'expression tag' -10 9 1 2PC1 HIS A 10 ? UNP Q8DYC0 ? ? 'expression tag' -9 10 1 2PC1 HIS A 11 ? UNP Q8DYC0 ? ? 'expression tag' -8 11 1 2PC1 HIS A 12 ? UNP Q8DYC0 ? ? 'expression tag' -7 12 1 2PC1 GLU A 13 ? UNP Q8DYC0 ? ? 'expression tag' -6 13 1 2PC1 ASN A 14 ? UNP Q8DYC0 ? ? 'expression tag' -5 14 1 2PC1 LEU A 15 ? UNP Q8DYC0 ? ? 'expression tag' -4 15 1 2PC1 TYR A 16 ? UNP Q8DYC0 ? ? 'expression tag' -3 16 1 2PC1 PHE A 17 ? UNP Q8DYC0 ? ? 'expression tag' -2 17 1 2PC1 GLN A 18 ? UNP Q8DYC0 ? ? 'expression tag' -1 18 1 2PC1 GLY A 19 ? UNP Q8DYC0 ? ? 'expression tag' 0 19 1 2PC1 MSE A 20 ? UNP Q8DYC0 MET 1 'modified residue' 1 20 1 2PC1 MSE A 34 ? UNP Q8DYC0 MET 15 'modified residue' 15 21 1 2PC1 MSE A 81 ? UNP Q8DYC0 MET 62 'modified residue' 62 22 1 2PC1 MSE A 156 ? UNP Q8DYC0 MET 137 'modified residue' 137 23 1 2PC1 MSE A 201 ? UNP Q8DYC0 MET 182 'modified residue' 182 24 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 2PC1 # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 1.97 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 37.68 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 7.79 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.pdbx_details 'NANODROP, 1.91M Ammonium sulfate, 0.1M Tris-HCl pH 7.79, VAPOR DIFFUSION, SITTING DROP, temperature 293K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.details 'Flat collimating mirror, toroid focusing mirror' _diffrn_detector.pdbx_collection_date 2007-03-15 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Double crystal' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.91162 1.0 2 0.97939 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL9-2 _diffrn_source.type 'SSRL BEAMLINE BL9-2' _diffrn_source.pdbx_wavelength_list '0.91162, 0.97939' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.entry_id 2PC1 _reflns.d_resolution_high 1.28 _reflns.d_resolution_low 25.959 _reflns.number_obs 73297 _reflns.pdbx_Rmerge_I_obs 0.030 _reflns.pdbx_netI_over_sigmaI 9.99 _reflns.percent_possible_obs 78.3 _reflns.B_iso_Wilson_estimate 13.84 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.28 1.33 2396 ? ? 0.422 1.62 ? ? ? ? 2499 28.20 1 1 1.33 1.38 3324 ? ? 0.351 2.2 ? ? ? ? 3396 38.60 2 1 1.38 1.44 4788 ? ? 0.266 2.9 ? ? ? ? 4917 54.90 3 1 1.44 1.52 7986 ? ? 0.21 3.6 ? ? ? ? 7971 82.00 4 1 1.52 1.61 7984 ? ? 0.143 5.0 ? ? ? ? 8049 89.40 5 1 1.61 1.74 8942 ? ? 0.097 7.0 ? ? ? ? 8922 91.80 6 1 1.74 1.91 8236 ? ? 0.061 10.1 ? ? ? ? 8388 92.70 7 1 1.91 2.19 8796 ? ? 0.036 15.0 ? ? ? ? 8925 93.90 8 1 2.19 ? 8610 ? ? 0.028 18.6 ? ? ? ? 8840 94.30 9 1 # _refine.entry_id 2PC1 _refine.ls_d_res_high 1.280 _refine.ls_d_res_low 25.959 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 79.300 _refine.ls_number_reflns_obs 37027 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 3. ATOM RECORD CONTAINS RESIDUAL B FACTORS ONLY. 4. SO4 AND GLYCEROL WERE MODELED BASED ON CRYSTALLIZATION AND CRYOPROTECTION CONDITIONS. ; _refine.ls_R_factor_all 0.167 _refine.ls_R_factor_R_work 0.167 _refine.ls_R_factor_R_free 0.178 _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 1905 _refine.B_iso_mean 14.664 _refine.aniso_B[1][1] -0.080 _refine.aniso_B[2][2] 0.240 _refine.aniso_B[3][3] -0.020 _refine.aniso_B[1][2] 0.160 _refine.aniso_B[1][3] -0.050 _refine.aniso_B[2][3] 0.340 _refine.correlation_coeff_Fo_to_Fc 0.970 _refine.correlation_coeff_Fo_to_Fc_free 0.967 _refine.pdbx_overall_ESU_R 0.056 _refine.pdbx_overall_ESU_R_Free 0.054 _refine.overall_SU_ML 0.034 _refine.overall_SU_B 1.712 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_obs 0.167 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1375 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 16 _refine_hist.number_atoms_solvent 179 _refine_hist.number_atoms_total 1570 _refine_hist.d_res_high 1.280 _refine_hist.d_res_low 25.959 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 1504 0.020 0.022 ? 'X-RAY DIFFRACTION' ? r_bond_other_d 1336 0.002 0.020 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2056 1.439 1.945 ? 'X-RAY DIFFRACTION' ? r_angle_other_deg 3106 0.788 3.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 198 6.233 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 81 35.774 24.568 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 255 11.470 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 9 8.368 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 217 0.082 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1722 0.006 0.020 ? 'X-RAY DIFFRACTION' ? r_gen_planes_other 316 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 298 0.227 0.200 ? 'X-RAY DIFFRACTION' ? r_nbd_other 1413 0.192 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 740 0.189 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_other 853 0.085 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 132 0.159 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 12 0.239 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 47 0.238 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 16 0.184 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 941 1.892 3.000 ? 'X-RAY DIFFRACTION' ? r_mcbond_other 373 0.387 3.000 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1437 2.690 5.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 674 4.058 8.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 606 5.479 11.000 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.280 _refine_ls_shell.d_res_low 1.313 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 27.680 _refine_ls_shell.number_reflns_R_work 924 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.293 _refine_ls_shell.R_factor_R_free 0.317 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 36 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs 960 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2PC1 _struct.title 'Crystal structure of acetyltransferase GNAT family (NP_688560.1) from Streptococcus agalactiae 2603 at 1.28 A resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text ;NP_688560.1, acetyltransferase GNAT family, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2, TRANSFERASE ; _struct_keywords.pdbx_keywords TRANSFERASE _struct_keywords.entry_id 2PC1 # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 4 ? # _struct_biol.id 1 _struct_biol.details ;SIZE EXCLUSION CHROMATOGRAPHY SUPPORTS THE ASSIGNMENT OF A MONOMER AS A SIGNIFICANT OLIGOMERIZATION STATE. ; _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PHE A 26 ? ASN A 28 ? PHE A 7 ASN A 9 5 ? 3 HELX_P HELX_P2 2 GLU A 29 ? THR A 47 ? GLU A 10 THR A 28 1 ? 19 HELX_P HELX_P3 3 ASN A 60 ? ASN A 70 ? ASN A 41 ASN A 51 1 ? 11 HELX_P HELX_P4 4 GLU A 93 ? ILE A 99 ? GLU A 74 ILE A 80 5 ? 7 HELX_P HELX_P5 5 ARG A 126 ? HIS A 140 ? ARG A 107 HIS A 121 1 ? 15 HELX_P HELX_P6 6 ASN A 153 ? LEU A 163 ? ASN A 134 LEU A 144 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A GLY 19 C ? ? ? 1_555 A MSE 20 N ? ? A GLY 0 A MSE 1 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale2 covale both ? A MSE 20 C ? ? ? 1_555 A GLN 21 N ? ? A MSE 1 A GLN 2 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale3 covale both ? A ILE 33 C ? ? ? 1_555 A MSE 34 N ? ? A ILE 14 A MSE 15 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale4 covale both ? A MSE 34 C ? ? ? 1_555 A LEU 35 N ? ? A MSE 15 A LEU 16 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale5 covale both ? A GLY 80 C ? ? ? 1_555 A MSE 81 N ? ? A GLY 61 A MSE 62 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale6 covale both ? A MSE 81 C ? ? ? 1_555 A LEU 82 N ? ? A MSE 62 A LEU 63 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale7 covale both ? A THR 155 C ? ? ? 1_555 A MSE 156 N ? ? A THR 136 A MSE 137 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale8 covale both ? A MSE 156 C ? ? ? 1_555 A GLN 157 N ? ? A MSE 137 A GLN 138 1_555 ? ? ? ? ? ? ? 1.325 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 TYR 58 A . ? TYR 39 A PRO 59 A ? PRO 40 A 1 -7.97 2 GLY 142 A . ? GLY 123 A PRO 143 A ? PRO 124 A 1 8.76 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 8 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 15 ? PHE A 17 ? LEU A -4 PHE A -2 A 2 MSE A 20 ? LEU A 24 ? MSE A 1 LEU A 5 A 3 ALA A 73 ? GLU A 78 ? ALA A 54 GLU A 59 A 4 MSE A 81 ? GLY A 91 ? MSE A 62 GLY A 72 A 5 TYR A 111 ? ILE A 119 ? TYR A 92 ILE A 100 A 6 ASP A 144 ? THR A 149 ? ASP A 125 THR A 130 A 7 ARG A 177 ? ILE A 183 ? ARG A 158 ILE A 164 A 8 GLN A 166 ? VAL A 171 ? GLN A 147 VAL A 152 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 15 ? N LEU A -4 O ILE A 22 ? O ILE A 3 A 2 3 N GLN A 21 ? N GLN A 2 O ILE A 77 ? O ILE A 58 A 3 4 N TRP A 74 ? N TRP A 55 O ALA A 86 ? O ALA A 67 A 4 5 N ALA A 87 ? N ALA A 68 O HIS A 115 ? O HIS A 96 A 5 6 N LEU A 112 ? N LEU A 93 O ARG A 146 ? O ARG A 127 A 6 7 N THR A 149 ? N THR A 130 O LEU A 178 ? O LEU A 159 A 7 8 O GLN A 181 ? O GLN A 162 N GLN A 166 ? N GLN A 147 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A SO4 183 ? 5 'BINDING SITE FOR RESIDUE SO4 A 183' AC2 Software A SO4 184 ? 5 'BINDING SITE FOR RESIDUE SO4 A 184' AC3 Software A GOL 185 ? 5 'BINDING SITE FOR RESIDUE GOL A 185' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 GLN A 51 ? GLN A 32 . ? 1_555 ? 2 AC1 5 TRP A 52 ? TRP A 33 . ? 1_555 ? 3 AC1 5 TYR A 58 ? TYR A 39 . ? 1_555 ? 4 AC1 5 ARG A 116 ? ARG A 97 . ? 1_555 ? 5 AC1 5 HOH E . ? HOH A 364 . ? 1_555 ? 6 AC2 5 ARG A 126 ? ARG A 107 . ? 1_555 ? 7 AC2 5 GLN A 130 ? GLN A 111 . ? 1_555 ? 8 AC2 5 HIS A 158 ? HIS A 139 . ? 1_555 ? 9 AC2 5 LYS A 162 ? LYS A 143 . ? 1_555 ? 10 AC2 5 HOH E . ? HOH A 305 . ? 1_555 ? 11 AC3 5 ASN A 62 ? ASN A 43 . ? 1_455 ? 12 AC3 5 ILE A 65 ? ILE A 46 . ? 1_455 ? 13 AC3 5 ASP A 66 ? ASP A 47 . ? 1_455 ? 14 AC3 5 GLU A 151 ? GLU A 132 . ? 1_555 ? 15 AC3 5 LYS A 170 ? LYS A 151 . ? 1_555 ? # _database_PDB_matrix.entry_id 2PC1 _database_PDB_matrix.origx[1][1] 1.00000 _database_PDB_matrix.origx[1][2] 0.00000 _database_PDB_matrix.origx[1][3] 0.00000 _database_PDB_matrix.origx[2][1] 0.00000 _database_PDB_matrix.origx[2][2] 1.00000 _database_PDB_matrix.origx[2][3] 0.00000 _database_PDB_matrix.origx[3][1] 0.00000 _database_PDB_matrix.origx[3][2] 0.00000 _database_PDB_matrix.origx[3][3] 1.00000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2PC1 _atom_sites.fract_transf_matrix[1][1] 0.02819 _atom_sites.fract_transf_matrix[1][2] 0.01201 _atom_sites.fract_transf_matrix[1][3] 0.01313 _atom_sites.fract_transf_matrix[2][1] 0.00000 _atom_sites.fract_transf_matrix[2][2] 0.02887 _atom_sites.fract_transf_matrix[2][3] 0.00698 _atom_sites.fract_transf_matrix[3][1] 0.00000 _atom_sites.fract_transf_matrix[3][2] 0.00000 _atom_sites.fract_transf_matrix[3][3] 0.02629 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 -18 ? ? ? A . n A 1 2 GLY 2 -17 ? ? ? A . n A 1 3 SER 3 -16 ? ? ? A . n A 1 4 ASP 4 -15 ? ? ? A . n A 1 5 LYS 5 -14 ? ? ? A . n A 1 6 ILE 6 -13 ? ? ? A . n A 1 7 HIS 7 -12 ? ? ? A . n A 1 8 HIS 8 -11 ? ? ? A . n A 1 9 HIS 9 -10 ? ? ? A . n A 1 10 HIS 10 -9 ? ? ? A . n A 1 11 HIS 11 -8 ? ? ? A . n A 1 12 HIS 12 -7 ? ? ? A . n A 1 13 GLU 13 -6 ? ? ? A . n A 1 14 ASN 14 -5 -5 ASN ASN A . n A 1 15 LEU 15 -4 -4 LEU LEU A . n A 1 16 TYR 16 -3 -3 TYR TYR A . n A 1 17 PHE 17 -2 -2 PHE PHE A . n A 1 18 GLN 18 -1 -1 GLN GLN A . n A 1 19 GLY 19 0 0 GLY GLY A . n A 1 20 MSE 20 1 1 MSE MSE A . n A 1 21 GLN 21 2 2 GLN GLN A . n A 1 22 ILE 22 3 3 ILE ILE A . n A 1 23 ARG 23 4 4 ARG ARG A . n A 1 24 LEU 24 5 5 LEU LEU A . n A 1 25 ALA 25 6 6 ALA ALA A . n A 1 26 PHE 26 7 7 PHE PHE A . n A 1 27 PRO 27 8 8 PRO PRO A . n A 1 28 ASN 28 9 9 ASN ASN A . n A 1 29 GLU 29 10 10 GLU GLU A . n A 1 30 ILE 30 11 11 ILE ILE A . n A 1 31 ASP 31 12 12 ASP ASP A . n A 1 32 GLN 32 13 13 GLN GLN A . n A 1 33 ILE 33 14 14 ILE ILE A . n A 1 34 MSE 34 15 15 MSE MSE A . n A 1 35 LEU 35 16 16 LEU LEU A . n A 1 36 LEU 36 17 17 LEU LEU A . n A 1 37 ILE 37 18 18 ILE ILE A . n A 1 38 GLU 38 19 19 GLU GLU A . n A 1 39 GLU 39 20 20 GLU GLU A . n A 1 40 ALA 40 21 21 ALA ALA A . n A 1 41 ARG 41 22 22 ARG ARG A . n A 1 42 ALA 42 23 23 ALA ALA A . n A 1 43 GLU 43 24 24 GLU GLU A . n A 1 44 ILE 44 25 25 ILE ILE A . n A 1 45 ALA 45 26 26 ALA ALA A . n A 1 46 LYS 46 27 27 LYS LYS A . n A 1 47 THR 47 28 28 THR THR A . n A 1 48 GLY 48 29 29 GLY GLY A . n A 1 49 SER 49 30 30 SER SER A . n A 1 50 ASP 50 31 31 ASP ASP A . n A 1 51 GLN 51 32 32 GLN GLN A . n A 1 52 TRP 52 33 33 TRP TRP A . n A 1 53 GLN 53 34 34 GLN GLN A . n A 1 54 LYS 54 35 35 LYS LYS A . n A 1 55 GLU 55 36 36 GLU GLU A . n A 1 56 ASP 56 37 37 ASP ASP A . n A 1 57 GLY 57 38 38 GLY GLY A . n A 1 58 TYR 58 39 39 TYR TYR A . n A 1 59 PRO 59 40 40 PRO PRO A . n A 1 60 ASN 60 41 41 ASN ASN A . n A 1 61 ARG 61 42 42 ARG ARG A . n A 1 62 ASN 62 43 43 ASN ASN A . n A 1 63 ASP 63 44 44 ASP ASP A . n A 1 64 ILE 64 45 45 ILE ILE A . n A 1 65 ILE 65 46 46 ILE ILE A . n A 1 66 ASP 66 47 47 ASP ASP A . n A 1 67 ASP 67 48 48 ASP ASP A . n A 1 68 ILE 68 49 49 ILE ILE A . n A 1 69 LEU 69 50 50 LEU LEU A . n A 1 70 ASN 70 51 51 ASN ASN A . n A 1 71 GLY 71 52 52 GLY GLY A . n A 1 72 TYR 72 53 53 TYR TYR A . n A 1 73 ALA 73 54 54 ALA ALA A . n A 1 74 TRP 74 55 55 TRP TRP A . n A 1 75 VAL 75 56 56 VAL VAL A . n A 1 76 GLY 76 57 57 GLY GLY A . n A 1 77 ILE 77 58 58 ILE ILE A . n A 1 78 GLU 78 59 59 GLU GLU A . n A 1 79 ASP 79 60 60 ASP ASP A . n A 1 80 GLY 80 61 61 GLY GLY A . n A 1 81 MSE 81 62 62 MSE MSE A . n A 1 82 LEU 82 63 63 LEU LEU A . n A 1 83 ALA 83 64 64 ALA ALA A . n A 1 84 THR 84 65 65 THR THR A . n A 1 85 TYR 85 66 66 TYR TYR A . n A 1 86 ALA 86 67 67 ALA ALA A . n A 1 87 ALA 87 68 68 ALA ALA A . n A 1 88 VAL 88 69 69 VAL VAL A . n A 1 89 ILE 89 70 70 ILE ILE A . n A 1 90 ASP 90 71 71 ASP ASP A . n A 1 91 GLY 91 72 72 GLY GLY A . n A 1 92 HIS 92 73 73 HIS HIS A . n A 1 93 GLU 93 74 74 GLU GLU A . n A 1 94 GLU 94 75 75 GLU GLU A . n A 1 95 VAL 95 76 76 VAL VAL A . n A 1 96 TYR 96 77 77 TYR TYR A . n A 1 97 ASP 97 78 78 ASP ASP A . n A 1 98 ALA 98 79 79 ALA ALA A . n A 1 99 ILE 99 80 80 ILE ILE A . n A 1 100 TYR 100 81 81 TYR TYR A . n A 1 101 GLU 101 82 82 GLU GLU A . n A 1 102 GLY 102 83 83 GLY GLY A . n A 1 103 LYS 103 84 84 LYS LYS A . n A 1 104 TRP 104 85 85 TRP TRP A . n A 1 105 LEU 105 86 86 LEU LEU A . n A 1 106 HIS 106 87 87 HIS HIS A . n A 1 107 ASP 107 88 88 ASP ASP A . n A 1 108 ASN 108 89 89 ASN ASN A . n A 1 109 HIS 109 90 90 HIS HIS A . n A 1 110 ARG 110 91 91 ARG ARG A . n A 1 111 TYR 111 92 92 TYR TYR A . n A 1 112 LEU 112 93 93 LEU LEU A . n A 1 113 THR 113 94 94 THR THR A . n A 1 114 PHE 114 95 95 PHE PHE A . n A 1 115 HIS 115 96 96 HIS HIS A . n A 1 116 ARG 116 97 97 ARG ARG A . n A 1 117 ILE 117 98 98 ILE ILE A . n A 1 118 ALA 118 99 99 ALA ALA A . n A 1 119 ILE 119 100 100 ILE ILE A . n A 1 120 SER 120 101 101 SER SER A . n A 1 121 ASN 121 102 102 ASN ASN A . n A 1 122 GLN 122 103 103 GLN GLN A . n A 1 123 PHE 123 104 104 PHE PHE A . n A 1 124 ARG 124 105 105 ARG ARG A . n A 1 125 GLY 125 106 106 GLY GLY A . n A 1 126 ARG 126 107 107 ARG ARG A . n A 1 127 GLY 127 108 108 GLY GLY A . n A 1 128 LEU 128 109 109 LEU LEU A . n A 1 129 ALA 129 110 110 ALA ALA A . n A 1 130 GLN 130 111 111 GLN GLN A . n A 1 131 THR 131 112 112 THR THR A . n A 1 132 PHE 132 113 113 PHE PHE A . n A 1 133 LEU 133 114 114 LEU LEU A . n A 1 134 GLN 134 115 115 GLN GLN A . n A 1 135 GLY 135 116 116 GLY GLY A . n A 1 136 LEU 136 117 117 LEU LEU A . n A 1 137 ILE 137 118 118 ILE ILE A . n A 1 138 GLU 138 119 119 GLU GLU A . n A 1 139 GLY 139 120 120 GLY GLY A . n A 1 140 HIS 140 121 121 HIS HIS A . n A 1 141 LYS 141 122 122 LYS LYS A . n A 1 142 GLY 142 123 123 GLY GLY A . n A 1 143 PRO 143 124 124 PRO PRO A . n A 1 144 ASP 144 125 125 ASP ASP A . n A 1 145 PHE 145 126 126 PHE PHE A . n A 1 146 ARG 146 127 127 ARG ARG A . n A 1 147 CYS 147 128 128 CYS CYS A . n A 1 148 ASP 148 129 129 ASP ASP A . n A 1 149 THR 149 130 130 THR THR A . n A 1 150 HIS 150 131 131 HIS HIS A . n A 1 151 GLU 151 132 132 GLU GLU A . n A 1 152 LYS 152 133 133 LYS LYS A . n A 1 153 ASN 153 134 134 ASN ASN A . n A 1 154 VAL 154 135 135 VAL VAL A . n A 1 155 THR 155 136 136 THR THR A . n A 1 156 MSE 156 137 137 MSE MSE A . n A 1 157 GLN 157 138 138 GLN GLN A . n A 1 158 HIS 158 139 139 HIS HIS A . n A 1 159 ILE 159 140 140 ILE ILE A . n A 1 160 LEU 160 141 141 LEU LEU A . n A 1 161 ASN 161 142 142 ASN ASN A . n A 1 162 LYS 162 143 143 LYS LYS A . n A 1 163 LEU 163 144 144 LEU LEU A . n A 1 164 GLY 164 145 145 GLY GLY A . n A 1 165 TYR 165 146 146 TYR TYR A . n A 1 166 GLN 166 147 147 GLN GLN A . n A 1 167 TYR 167 148 148 TYR TYR A . n A 1 168 CYS 168 149 149 CYS CYS A . n A 1 169 GLY 169 150 150 GLY GLY A . n A 1 170 LYS 170 151 151 LYS LYS A . n A 1 171 VAL 171 152 152 VAL VAL A . n A 1 172 PRO 172 153 153 PRO PRO A . n A 1 173 LEU 173 154 154 LEU LEU A . n A 1 174 ASP 174 155 155 ASP ASP A . n A 1 175 GLY 175 156 156 GLY GLY A . n A 1 176 VAL 176 157 157 VAL VAL A . n A 1 177 ARG 177 158 158 ARG ARG A . n A 1 178 LEU 178 159 159 LEU LEU A . n A 1 179 ALA 179 160 160 ALA ALA A . n A 1 180 TYR 180 161 161 TYR TYR A . n A 1 181 GLN 181 162 162 GLN GLN A . n A 1 182 LYS 182 163 163 LYS LYS A . n A 1 183 ILE 183 164 164 ILE ILE A . n A 1 184 LYS 184 165 165 LYS LYS A . n A 1 185 GLU 185 166 166 GLU GLU A . n A 1 186 LYS 186 167 167 LYS LYS A . n A 1 187 GLY 187 168 ? ? ? A . n A 1 188 GLU 188 169 ? ? ? A . n A 1 189 THR 189 170 ? ? ? A . n A 1 190 SER 190 171 ? ? ? A . n A 1 191 ILE 191 172 ? ? ? A . n A 1 192 TYR 192 173 ? ? ? A . n A 1 193 ARG 193 174 ? ? ? A . n A 1 194 GLU 194 175 ? ? ? A . n A 1 195 ILE 195 176 ? ? ? A . n A 1 196 ASP 196 177 ? ? ? A . n A 1 197 GLU 197 178 ? ? ? A . n A 1 198 ARG 198 179 ? ? ? A . n A 1 199 ASN 199 180 ? ? ? A . n A 1 200 PRO 200 181 ? ? ? A . n A 1 201 MSE 201 182 ? ? ? A . n # _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 1 183 1 SO4 SO4 A . C 2 SO4 1 184 2 SO4 SO4 A . D 3 GOL 1 185 3 GOL GOL A . E 4 HOH 1 186 4 HOH HOH A . E 4 HOH 2 187 5 HOH HOH A . E 4 HOH 3 188 6 HOH HOH A . E 4 HOH 4 189 7 HOH HOH A . E 4 HOH 5 190 8 HOH HOH A . E 4 HOH 6 191 9 HOH HOH A . E 4 HOH 7 192 10 HOH HOH A . E 4 HOH 8 193 11 HOH HOH A . E 4 HOH 9 194 12 HOH HOH A . E 4 HOH 10 195 13 HOH HOH A . E 4 HOH 11 196 14 HOH HOH A . E 4 HOH 12 197 15 HOH HOH A . E 4 HOH 13 198 16 HOH HOH A . E 4 HOH 14 199 17 HOH HOH A . E 4 HOH 15 200 18 HOH HOH A . E 4 HOH 16 201 19 HOH HOH A . E 4 HOH 17 202 20 HOH HOH A . E 4 HOH 18 203 21 HOH HOH A . E 4 HOH 19 204 22 HOH HOH A . E 4 HOH 20 205 23 HOH HOH A . E 4 HOH 21 206 24 HOH HOH A . E 4 HOH 22 207 25 HOH HOH A . E 4 HOH 23 208 26 HOH HOH A . E 4 HOH 24 209 27 HOH HOH A . E 4 HOH 25 210 28 HOH HOH A . E 4 HOH 26 211 29 HOH HOH A . E 4 HOH 27 212 30 HOH HOH A . E 4 HOH 28 213 31 HOH HOH A . E 4 HOH 29 214 32 HOH HOH A . E 4 HOH 30 215 33 HOH HOH A . E 4 HOH 31 216 34 HOH HOH A . E 4 HOH 32 217 35 HOH HOH A . E 4 HOH 33 218 36 HOH HOH A . E 4 HOH 34 219 37 HOH HOH A . E 4 HOH 35 220 38 HOH HOH A . E 4 HOH 36 221 39 HOH HOH A . E 4 HOH 37 222 40 HOH HOH A . E 4 HOH 38 223 41 HOH HOH A . E 4 HOH 39 224 42 HOH HOH A . E 4 HOH 40 225 43 HOH HOH A . E 4 HOH 41 226 44 HOH HOH A . E 4 HOH 42 227 45 HOH HOH A . E 4 HOH 43 228 46 HOH HOH A . E 4 HOH 44 229 47 HOH HOH A . E 4 HOH 45 230 48 HOH HOH A . E 4 HOH 46 231 49 HOH HOH A . E 4 HOH 47 232 50 HOH HOH A . E 4 HOH 48 233 51 HOH HOH A . E 4 HOH 49 234 52 HOH HOH A . E 4 HOH 50 235 53 HOH HOH A . E 4 HOH 51 236 54 HOH HOH A . E 4 HOH 52 237 55 HOH HOH A . E 4 HOH 53 238 56 HOH HOH A . E 4 HOH 54 239 57 HOH HOH A . E 4 HOH 55 240 58 HOH HOH A . E 4 HOH 56 241 59 HOH HOH A . E 4 HOH 57 242 60 HOH HOH A . E 4 HOH 58 243 61 HOH HOH A . E 4 HOH 59 244 62 HOH HOH A . E 4 HOH 60 245 63 HOH HOH A . E 4 HOH 61 246 64 HOH HOH A . E 4 HOH 62 247 65 HOH HOH A . E 4 HOH 63 248 66 HOH HOH A . E 4 HOH 64 249 67 HOH HOH A . E 4 HOH 65 250 68 HOH HOH A . E 4 HOH 66 251 69 HOH HOH A . E 4 HOH 67 252 70 HOH HOH A . E 4 HOH 68 253 71 HOH HOH A . E 4 HOH 69 254 72 HOH HOH A . E 4 HOH 70 255 73 HOH HOH A . E 4 HOH 71 256 74 HOH HOH A . E 4 HOH 72 257 75 HOH HOH A . E 4 HOH 73 258 76 HOH HOH A . E 4 HOH 74 259 77 HOH HOH A . E 4 HOH 75 260 78 HOH HOH A . E 4 HOH 76 261 79 HOH HOH A . E 4 HOH 77 262 80 HOH HOH A . E 4 HOH 78 263 81 HOH HOH A . E 4 HOH 79 264 82 HOH HOH A . E 4 HOH 80 265 83 HOH HOH A . E 4 HOH 81 266 84 HOH HOH A . E 4 HOH 82 267 85 HOH HOH A . E 4 HOH 83 268 86 HOH HOH A . E 4 HOH 84 269 87 HOH HOH A . E 4 HOH 85 270 88 HOH HOH A . E 4 HOH 86 271 89 HOH HOH A . E 4 HOH 87 272 90 HOH HOH A . E 4 HOH 88 273 91 HOH HOH A . E 4 HOH 89 274 92 HOH HOH A . E 4 HOH 90 275 93 HOH HOH A . E 4 HOH 91 276 94 HOH HOH A . E 4 HOH 92 277 95 HOH HOH A . E 4 HOH 93 278 96 HOH HOH A . E 4 HOH 94 279 97 HOH HOH A . E 4 HOH 95 280 98 HOH HOH A . E 4 HOH 96 281 99 HOH HOH A . E 4 HOH 97 282 100 HOH HOH A . E 4 HOH 98 283 101 HOH HOH A . E 4 HOH 99 284 102 HOH HOH A . E 4 HOH 100 285 103 HOH HOH A . E 4 HOH 101 286 104 HOH HOH A . E 4 HOH 102 287 105 HOH HOH A . E 4 HOH 103 288 106 HOH HOH A . E 4 HOH 104 289 107 HOH HOH A . E 4 HOH 105 290 108 HOH HOH A . E 4 HOH 106 291 109 HOH HOH A . E 4 HOH 107 292 110 HOH HOH A . E 4 HOH 108 293 111 HOH HOH A . E 4 HOH 109 294 112 HOH HOH A . E 4 HOH 110 295 113 HOH HOH A . E 4 HOH 111 296 114 HOH HOH A . E 4 HOH 112 297 115 HOH HOH A . E 4 HOH 113 298 116 HOH HOH A . E 4 HOH 114 299 117 HOH HOH A . E 4 HOH 115 300 118 HOH HOH A . E 4 HOH 116 301 119 HOH HOH A . E 4 HOH 117 302 120 HOH HOH A . E 4 HOH 118 303 121 HOH HOH A . E 4 HOH 119 304 122 HOH HOH A . E 4 HOH 120 305 123 HOH HOH A . E 4 HOH 121 306 124 HOH HOH A . E 4 HOH 122 307 125 HOH HOH A . E 4 HOH 123 308 126 HOH HOH A . E 4 HOH 124 309 127 HOH HOH A . E 4 HOH 125 310 128 HOH HOH A . E 4 HOH 126 311 129 HOH HOH A . E 4 HOH 127 312 130 HOH HOH A . E 4 HOH 128 313 131 HOH HOH A . E 4 HOH 129 314 132 HOH HOH A . E 4 HOH 130 315 133 HOH HOH A . E 4 HOH 131 316 134 HOH HOH A . E 4 HOH 132 317 135 HOH HOH A . E 4 HOH 133 318 136 HOH HOH A . E 4 HOH 134 319 137 HOH HOH A . E 4 HOH 135 320 138 HOH HOH A . E 4 HOH 136 321 139 HOH HOH A . E 4 HOH 137 322 140 HOH HOH A . E 4 HOH 138 323 141 HOH HOH A . E 4 HOH 139 324 142 HOH HOH A . E 4 HOH 140 325 143 HOH HOH A . E 4 HOH 141 326 144 HOH HOH A . E 4 HOH 142 327 145 HOH HOH A . E 4 HOH 143 328 146 HOH HOH A . E 4 HOH 144 329 147 HOH HOH A . E 4 HOH 145 330 148 HOH HOH A . E 4 HOH 146 331 149 HOH HOH A . E 4 HOH 147 332 150 HOH HOH A . E 4 HOH 148 333 151 HOH HOH A . E 4 HOH 149 334 152 HOH HOH A . E 4 HOH 150 335 153 HOH HOH A . E 4 HOH 151 336 154 HOH HOH A . E 4 HOH 152 337 155 HOH HOH A . E 4 HOH 153 338 156 HOH HOH A . E 4 HOH 154 339 157 HOH HOH A . E 4 HOH 155 340 158 HOH HOH A . E 4 HOH 156 341 159 HOH HOH A . E 4 HOH 157 342 160 HOH HOH A . E 4 HOH 158 343 161 HOH HOH A . E 4 HOH 159 344 162 HOH HOH A . E 4 HOH 160 345 163 HOH HOH A . E 4 HOH 161 346 164 HOH HOH A . E 4 HOH 162 347 165 HOH HOH A . E 4 HOH 163 348 166 HOH HOH A . E 4 HOH 164 349 167 HOH HOH A . E 4 HOH 165 350 168 HOH HOH A . E 4 HOH 166 351 169 HOH HOH A . E 4 HOH 167 352 170 HOH HOH A . E 4 HOH 168 353 171 HOH HOH A . E 4 HOH 169 354 172 HOH HOH A . E 4 HOH 170 355 173 HOH HOH A . E 4 HOH 171 356 174 HOH HOH A . E 4 HOH 172 357 175 HOH HOH A . E 4 HOH 173 358 176 HOH HOH A . E 4 HOH 174 359 177 HOH HOH A . E 4 HOH 175 360 178 HOH HOH A . E 4 HOH 176 361 179 HOH HOH A . E 4 HOH 177 362 180 HOH HOH A . E 4 HOH 178 363 181 HOH HOH A . E 4 HOH 179 364 182 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 20 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 34 A MSE 15 ? MET SELENOMETHIONINE 3 A MSE 81 A MSE 62 ? MET SELENOMETHIONINE 4 A MSE 156 A MSE 137 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-04-24 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-18 5 'Structure model' 1 4 2017-10-25 6 'Structure model' 1 5 2023-01-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Refinement description' 5 5 'Structure model' 'Author supporting evidence' 6 6 'Structure model' 'Database references' 7 6 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' pdbx_struct_assembly_auth_evidence 3 6 'Structure model' database_2 4 6 'Structure model' struct_conn 5 6 'Structure model' struct_ref_seq_dif 6 6 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.classification' 2 4 'Structure model' '_software.name' 3 6 'Structure model' '_database_2.pdbx_DOI' 4 6 'Structure model' '_database_2.pdbx_database_accession' 5 6 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 6 6 'Structure model' '_struct_ref_seq_dif.details' 7 6 'Structure model' '_struct_site.pdbx_auth_asym_id' 8 6 'Structure model' '_struct_site.pdbx_auth_comp_id' 9 6 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 18.0790 _pdbx_refine_tls.origin_y 26.7290 _pdbx_refine_tls.origin_z 12.4920 _pdbx_refine_tls.T[1][1] -0.0195 _pdbx_refine_tls.T[2][2] -0.0234 _pdbx_refine_tls.T[3][3] 0.0064 _pdbx_refine_tls.T[1][2] 0.0085 _pdbx_refine_tls.T[1][3] 0.0022 _pdbx_refine_tls.T[2][3] -0.0177 _pdbx_refine_tls.L[1][1] 1.2475 _pdbx_refine_tls.L[2][2] 1.0151 _pdbx_refine_tls.L[3][3] 0.5476 _pdbx_refine_tls.L[1][2] 0.1855 _pdbx_refine_tls.L[1][3] -0.1538 _pdbx_refine_tls.L[2][3] -0.3522 _pdbx_refine_tls.S[1][1] -0.0211 _pdbx_refine_tls.S[2][2] 0.0029 _pdbx_refine_tls.S[3][3] 0.0182 _pdbx_refine_tls.S[1][2] 0.0049 _pdbx_refine_tls.S[1][3] -0.0960 _pdbx_refine_tls.S[2][3] -0.0776 _pdbx_refine_tls.S[2][1] 0.0207 _pdbx_refine_tls.S[3][1] 0.0201 _pdbx_refine_tls.S[3][2] -0.0252 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' # _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_label_asym_id A _pdbx_refine_tls_group.beg_label_seq_id 15 _pdbx_refine_tls_group.end_label_asym_id A _pdbx_refine_tls_group.end_label_seq_id 184 _pdbx_refine_tls_group.selection ALL _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id -4 _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 165 _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.selection_details ? # _phasing.method MAD # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 1 SHELX . ? package 'George Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 2 REFMAC 5.2.0005 ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran_77 ? 3 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/xscale_program.html ? ? 4 PDB_EXTRACT 2.000 'April. 3, 2006' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 5 MAR345 CCD ? ? ? ? 'data collection' ? ? ? 6 SHELXD . ? ? ? ? phasing ? ? ? 7 SOLVE . ? ? ? ? phasing ? ? ? 8 # loop_ _pdbx_database_remark.id _pdbx_database_remark.text 300 ; BIOMOLECULE: 1 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT WHICH CONSISTS OF 1 CHAIN(S). SEE REMARK 350 FOR INFORMATION ON GENERATING THE BIOLOGICAL MOLECULE(S). SIZE EXCLUSION CHROMATOGRAPHY SUPPORTS THE ASSIGNMENT OF A MONOMER AS A SIGNIFICANT OLIGOMERIZATION STATE. ; 999 ; SEQUENCE THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. ; # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OD1 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 ASP _pdbx_validate_close_contact.auth_seq_id_1 88 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 B _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 213 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.18 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 SE _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 MSE _pdbx_validate_rmsd_bond.auth_seq_id_1 15 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 CE _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 MSE _pdbx_validate_rmsd_bond.auth_seq_id_2 15 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.452 _pdbx_validate_rmsd_bond.bond_target_value 1.950 _pdbx_validate_rmsd_bond.bond_deviation -0.498 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.059 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PHE A 104 ? ? -110.72 77.50 2 1 ARG A 107 ? ? 72.42 -17.39 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ASN -5 ? CG ? A ASN 14 CG 2 1 Y 1 A ASN -5 ? OD1 ? A ASN 14 OD1 3 1 Y 1 A ASN -5 ? ND2 ? A ASN 14 ND2 4 1 Y 1 A LYS 35 ? CE ? A LYS 54 CE 5 1 Y 1 A LYS 35 ? NZ ? A LYS 54 NZ 6 1 Y 1 A GLU 36 ? CG ? A GLU 55 CG 7 1 Y 1 A GLU 36 ? CD ? A GLU 55 CD 8 1 Y 1 A GLU 36 ? OE1 ? A GLU 55 OE1 9 1 Y 1 A GLU 36 ? OE2 ? A GLU 55 OE2 10 1 Y 1 A LYS 84 ? CE ? A LYS 103 CE 11 1 Y 1 A LYS 84 ? NZ ? A LYS 103 NZ 12 1 Y 1 A GLN 103 ? CG ? A GLN 122 CG 13 1 Y 1 A GLN 103 ? CD ? A GLN 122 CD 14 1 Y 1 A GLN 103 ? OE1 ? A GLN 122 OE1 15 1 Y 1 A GLN 103 ? NE2 ? A GLN 122 NE2 16 1 Y 1 A ARG 105 ? CG ? A ARG 124 CG 17 1 Y 1 A ARG 105 ? CD ? A ARG 124 CD 18 1 Y 1 A ARG 105 ? NE ? A ARG 124 NE 19 1 Y 1 A ARG 105 ? CZ ? A ARG 124 CZ 20 1 Y 1 A ARG 105 ? NH1 ? A ARG 124 NH1 21 1 Y 1 A ARG 105 ? NH2 ? A ARG 124 NH2 22 1 Y 1 A LYS 122 ? CD ? A LYS 141 CD 23 1 Y 1 A LYS 122 ? CE ? A LYS 141 CE 24 1 Y 1 A LYS 122 ? NZ ? A LYS 141 NZ 25 1 Y 1 A GLN 147 ? CD ? A GLN 166 CD 26 1 Y 1 A GLN 147 ? OE1 ? A GLN 166 OE1 27 1 Y 1 A GLN 147 ? NE2 ? A GLN 166 NE2 28 1 Y 1 A GLU 166 ? CG ? A GLU 185 CG 29 1 Y 1 A GLU 166 ? CD ? A GLU 185 CD 30 1 Y 1 A GLU 166 ? OE1 ? A GLU 185 OE1 31 1 Y 1 A GLU 166 ? OE2 ? A GLU 185 OE2 32 1 Y 1 A LYS 167 ? CG ? A LYS 186 CG 33 1 Y 1 A LYS 167 ? CD ? A LYS 186 CD 34 1 Y 1 A LYS 167 ? CE ? A LYS 186 CE 35 1 Y 1 A LYS 167 ? NZ ? A LYS 186 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE -18 ? A MSE 1 2 1 Y 1 A GLY -17 ? A GLY 2 3 1 Y 1 A SER -16 ? A SER 3 4 1 Y 1 A ASP -15 ? A ASP 4 5 1 Y 1 A LYS -14 ? A LYS 5 6 1 Y 1 A ILE -13 ? A ILE 6 7 1 Y 1 A HIS -12 ? A HIS 7 8 1 Y 1 A HIS -11 ? A HIS 8 9 1 Y 1 A HIS -10 ? A HIS 9 10 1 Y 1 A HIS -9 ? A HIS 10 11 1 Y 1 A HIS -8 ? A HIS 11 12 1 Y 1 A HIS -7 ? A HIS 12 13 1 Y 1 A GLU -6 ? A GLU 13 14 1 Y 1 A GLY 168 ? A GLY 187 15 1 Y 1 A GLU 169 ? A GLU 188 16 1 Y 1 A THR 170 ? A THR 189 17 1 Y 1 A SER 171 ? A SER 190 18 1 Y 1 A ILE 172 ? A ILE 191 19 1 Y 1 A TYR 173 ? A TYR 192 20 1 Y 1 A ARG 174 ? A ARG 193 21 1 Y 1 A GLU 175 ? A GLU 194 22 1 Y 1 A ILE 176 ? A ILE 195 23 1 Y 1 A ASP 177 ? A ASP 196 24 1 Y 1 A GLU 178 ? A GLU 197 25 1 Y 1 A ARG 179 ? A ARG 198 26 1 Y 1 A ASN 180 ? A ASN 199 27 1 Y 1 A PRO 181 ? A PRO 200 28 1 Y 1 A MSE 182 ? A MSE 201 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 GLYCEROL GOL 4 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #