HEADER HYDROLASE 29-MAR-07 2PC2 TITLE LYSOZYME COCRYSTALLIZED WITH TRIS-DIPICOLINATE EU COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: LYSOZYME C; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: 1,4-BETA-N-ACETYLMURAMIDASE C, ALLERGEN GAL D 4, GAL D IV; COMPND 5 EC: 3.2.1.17 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GALLUS GALLUS; SOURCE 3 ORGANISM_COMMON: CHICKEN; SOURCE 4 ORGANISM_TAXID: 9031; SOURCE 5 OTHER_DETAILS: HEN-EGG WHITE KEYWDS HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR G.POMPIDOR,J.VICAT,R.KAHN REVDAT 5 18-OCT-17 2PC2 1 REMARK REVDAT 4 30-JUN-10 2PC2 1 JRNL REVDAT 3 24-FEB-09 2PC2 1 VERSN REVDAT 2 06-MAY-08 2PC2 1 JRNL REVDAT 1 01-APR-08 2PC2 0 JRNL AUTH G.POMPIDOR,O.MAURY,J.VICAT,R.KAHN JRNL TITL A DIPICOLINATE LANTHANIDE COMPLEX FOR SOLVING PROTEIN JRNL TITL 2 STRUCTURES USING ANOMALOUS DIFFRACTION JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 66 762 2010 JRNL REFN ISSN 0907-4449 JRNL PMID 18350532 JRNL DOI 10.1107/S0907444910010954 REMARK 2 REMARK 2 RESOLUTION. 1.54 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.54 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 18.98 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 3 NUMBER OF REFLECTIONS : 16396 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.140 REMARK 3 R VALUE (WORKING SET) : 0.138 REMARK 3 FREE R VALUE : 0.167 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 832 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.54 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.58 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1034 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 87.84 REMARK 3 BIN R VALUE (WORKING SET) : 0.1480 REMARK 3 BIN FREE R VALUE SET COUNT : 42 REMARK 3 BIN FREE R VALUE : 0.2160 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1001 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 162 REMARK 3 SOLVENT ATOMS : 198 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 10.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 10.09 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.24000 REMARK 3 B22 (A**2) : -0.08000 REMARK 3 B33 (A**2) : -0.09000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.11000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.081 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.078 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.965 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.958 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1198 ; 0.009 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 938 ; 0.000 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1622 ; 1.520 ; 2.044 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2164 ; 4.073 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 132 ; 5.876 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 51 ;34.670 ;23.137 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 172 ;11.867 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 11 ; 9.844 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 146 ; 0.080 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1405 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 271 ; 0.006 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 279 ; 0.227 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 940 ; 0.236 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 618 ; 0.202 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 533 ; 0.103 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 131 ; 0.158 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 2 ; 0.040 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 27 ; 0.142 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 96 ; 0.301 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 46 ; 0.195 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 644 ; 0.581 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 273 ; 0.000 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1026 ; 1.044 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 554 ; 1.663 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 595 ; 2.367 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): 5 ; 7.896 ; 3.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2PC2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-APR-07. REMARK 100 THE DEPOSITION ID IS D_1000042212. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-MAY-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.1 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : ENRAF-NONIUS FR591 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : MULTILAYER REMARK 200 OPTICS : MULTILAYER REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16398 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.538 REMARK 200 RESOLUTION RANGE LOW (A) : 19.035 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 200 DATA REDUNDANCY : 7.900 REMARK 200 R MERGE (I) : 0.09500 REMARK 200 R SYM (I) : 0.09500 REMARK 200 FOR THE DATA SET : 3.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.54 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.63 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.7 REMARK 200 DATA REDUNDANCY IN SHELL : 5.20 REMARK 200 R MERGE FOR SHELL (I) : 0.10200 REMARK 200 R SYM FOR SHELL (I) : 0.10200 REMARK 200 FOR SHELL : 5.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHARP, SOLOMON REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 37.25 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.96 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.3M NACL, 0.1M MES, PH 5.1, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 25.13300 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 16.88950 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 25.13300 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 16.88950 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 EU EU A 202 LIES ON A SPECIAL POSITION. REMARK 375 N1 PDC A 402 LIES ON A SPECIAL POSITION. REMARK 375 C4 PDC A 402 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 885 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 886 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 898 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O2 PDC A 404 O HOH A 877 2.04 REMARK 500 O LEU A 129 O HOH A 874 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O2 PDC A 403 O HOH A 877 2655 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 EU A 203 EU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PDC A 503 O1 REMARK 620 2 PDC A 504 O4 147.3 REMARK 620 3 PDC A 503 O4 125.4 83.6 REMARK 620 4 PDC A 502 O4 75.3 85.3 150.2 REMARK 620 5 PDC A 503 N1 63.9 140.4 61.6 134.3 REMARK 620 6 PDC A 502 O1 87.8 82.1 80.5 125.1 74.6 REMARK 620 7 PDC A 504 O1 80.5 121.5 83.9 78.6 75.5 150.0 REMARK 620 8 PDC A 502 N1 75.4 72.6 136.0 64.9 119.3 60.3 140.1 REMARK 620 9 PDC A 504 N1 135.6 63.1 70.7 79.6 116.0 136.4 58.8 124.7 REMARK 620 N 1 2 3 4 5 6 7 8 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 EU A 201 EU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PDC A 304 O1 REMARK 620 2 PDC A 303 O4 75.4 REMARK 620 3 PDC A 302 O1 145.9 91.8 REMARK 620 4 PDC A 304 O4 122.9 152.3 82.2 REMARK 620 5 PDC A 303 N1 73.6 64.7 72.4 136.6 REMARK 620 6 PDC A 302 O4 83.2 75.4 124.6 85.8 137.6 REMARK 620 7 PDC A 303 O1 86.6 127.6 76.3 77.4 63.0 151.2 REMARK 620 8 PDC A 304 N1 62.0 129.2 139.0 61.2 121.8 73.4 78.1 REMARK 620 9 PDC A 302 N1 136.9 72.2 62.9 81.1 115.2 61.8 136.0 122.8 REMARK 620 N 1 2 3 4 5 6 7 8 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 EU A 204 EU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PDC A 602 O1 REMARK 620 2 PDC A 603 O1 82.0 REMARK 620 3 PDC A 604 O4 86.1 70.4 REMARK 620 4 PDC A 602 N1 67.4 145.1 90.4 REMARK 620 5 PDC A 602 O4 130.2 140.3 87.3 63.3 REMARK 620 6 PDC A 603 N1 76.7 67.3 136.0 118.3 134.3 REMARK 620 7 PDC A 603 O4 83.7 128.4 156.6 66.3 83.5 61.2 REMARK 620 8 PDC A 604 N1 143.7 69.8 63.5 128.0 70.9 110.8 131.8 REMARK 620 9 PDC A 604 O1 142.6 86.4 123.0 128.2 78.7 66.0 76.0 59.7 REMARK 620 N 1 2 3 4 5 6 7 8 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 EU A 202 EU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PDC A 403 N1 REMARK 620 2 PDC A 402 N1 119.9 REMARK 620 3 PDC A 404 N1 119.1 120.9 REMARK 620 4 PDC A 403 O4 66.9 70.0 139.6 REMARK 620 5 PDC A 402 O1 135.4 65.7 74.9 76.3 REMARK 620 6 PDC A 404 O4 134.9 72.5 64.7 142.6 89.7 REMARK 620 7 PDC A 404 O1 73.3 137.7 64.4 82.0 77.5 129.1 REMARK 620 8 PDC A 402 O4 73.7 64.6 132.8 87.6 130.3 75.2 146.9 REMARK 620 9 PDC A 403 O1 64.7 135.4 71.1 131.5 146.0 77.0 86.9 76.7 REMARK 620 N 1 2 3 4 5 6 7 8 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 EU A 205 EU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PDC A 702 O4 REMARK 620 2 PDC A 702 O1 124.6 REMARK 620 3 PDC A 702 N1 61.9 62.7 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 206 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PDC A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PDC A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PDC A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PDC A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PDC A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PDC A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PDC A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PDC A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PDC A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PDC A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PDC A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PDC A 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PDC A 702 DBREF 2PC2 A 1 129 UNP P00698 LYSC_CHICK 19 147 SEQRES 1 A 129 LYS VAL PHE GLY ARG CYS GLU LEU ALA ALA ALA MET LYS SEQRES 2 A 129 ARG HIS GLY LEU ASP ASN TYR ARG GLY TYR SER LEU GLY SEQRES 3 A 129 ASN TRP VAL CYS ALA ALA LYS PHE GLU SER ASN PHE ASN SEQRES 4 A 129 THR GLN ALA THR ASN ARG ASN THR ASP GLY SER THR ASP SEQRES 5 A 129 TYR GLY ILE LEU GLN ILE ASN SER ARG TRP TRP CYS ASN SEQRES 6 A 129 ASP GLY ARG THR PRO GLY SER ARG ASN LEU CYS ASN ILE SEQRES 7 A 129 PRO CYS SER ALA LEU LEU SER SER ASP ILE THR ALA SER SEQRES 8 A 129 VAL ASN CYS ALA LYS LYS ILE VAL SER ASP GLY ASN GLY SEQRES 9 A 129 MET ASN ALA TRP VAL ALA TRP ARG ASN ARG CYS LYS GLY SEQRES 10 A 129 THR ASP VAL GLN ALA TRP ILE ARG GLY CYS ARG LEU HET EU A 201 1 HET EU A 202 1 HET EU A 203 1 HET EU A 204 1 HET EU A 205 1 HET CL A 206 1 HET PDC A 302 12 HET PDC A 303 12 HET PDC A 304 12 HET PDC A 402 12 HET PDC A 403 12 HET PDC A 404 12 HET PDC A 502 12 HET PDC A 503 12 HET PDC A 504 12 HET PDC A 602 12 HET PDC A 603 12 HET PDC A 604 12 HET PDC A 702 12 HETNAM EU EUROPIUM ION HETNAM CL CHLORIDE ION HETNAM PDC PYRIDINE-2,6-DICARBOXYLIC ACID HETSYN PDC DIPICOLINIC ACID FORMUL 2 EU 5(EU 2+) FORMUL 7 CL CL 1- FORMUL 8 PDC 13(C7 H5 N O4) FORMUL 21 HOH *198(H2 O) HELIX 1 1 GLY A 4 HIS A 15 1 12 HELIX 2 2 ASN A 19 TYR A 23 5 5 HELIX 3 3 SER A 24 ASN A 37 1 14 HELIX 4 4 PRO A 79 SER A 85 5 7 HELIX 5 5 ILE A 88 VAL A 99 1 12 HELIX 6 6 ASN A 103 ALA A 107 5 5 HELIX 7 7 TRP A 108 CYS A 115 1 8 HELIX 8 8 ASP A 119 ARG A 125 5 7 SHEET 1 A 3 THR A 43 ARG A 45 0 SHEET 2 A 3 THR A 51 TYR A 53 -1 O ASP A 52 N ASN A 44 SHEET 3 A 3 ILE A 58 ASN A 59 -1 O ILE A 58 N TYR A 53 SSBOND 1 CYS A 6 CYS A 127 1555 1555 2.02 SSBOND 2 CYS A 30 CYS A 115 1555 1555 2.05 SSBOND 3 CYS A 64 CYS A 80 1555 1555 2.03 SSBOND 4 CYS A 76 CYS A 94 1555 1555 2.03 LINK EU EU A 203 O1 PDC A 503 1555 1555 2.32 LINK EU EU A 201 O1 PDC A 304 1555 1555 2.36 LINK EU EU A 203 O4 PDC A 504 1555 1555 2.38 LINK EU EU A 203 O4 PDC A 503 1555 1555 2.38 LINK EU EU A 203 O4 PDC A 502 1555 1555 2.38 LINK EU EU A 204 O1 PDC A 602 1555 1555 2.38 LINK EU EU A 204 O1 PDC A 603 1555 1555 2.40 LINK EU EU A 202 N1 APDC A 403 1555 1555 2.44 LINK EU EU A 205 O4 BPDC A 702 1555 1555 2.44 LINK EU EU A 204 O4 APDC A 604 1555 1555 2.45 LINK EU EU A 201 O4 PDC A 303 1555 1555 2.46 LINK EU EU A 201 O1 PDC A 302 1555 1555 2.47 LINK EU EU A 201 O4 PDC A 304 1555 1555 2.47 LINK EU EU A 202 N1 PDC A 402 1555 1555 2.47 LINK EU EU A 204 N1 PDC A 602 1555 1555 2.49 LINK EU EU A 205 O1 BPDC A 702 1555 1555 2.49 LINK EU EU A 204 O4 PDC A 602 1555 1555 2.49 LINK EU EU A 203 N1 PDC A 503 1555 1555 2.50 LINK EU EU A 202 N1 BPDC A 404 1555 1555 2.50 LINK EU EU A 203 O1 PDC A 502 1555 1555 2.51 LINK EU EU A 201 N1 PDC A 303 1555 1555 2.51 LINK EU EU A 201 O4 PDC A 302 1555 1555 2.52 LINK EU EU A 204 N1 PDC A 603 1555 1555 2.53 LINK EU EU A 201 O1 PDC A 303 1555 1555 2.53 LINK EU EU A 201 N1 PDC A 304 1555 1555 2.55 LINK EU EU A 203 O1 PDC A 504 1555 1555 2.55 LINK EU EU A 201 N1 PDC A 302 1555 1555 2.55 LINK EU EU A 203 N1 PDC A 502 1555 1555 2.57 LINK EU EU A 202 O4 APDC A 403 1555 1555 2.60 LINK EU EU A 204 O4 PDC A 603 1555 1555 2.61 LINK EU EU A 204 N1 APDC A 604 1555 1555 2.62 LINK EU EU A 205 N1 BPDC A 702 1555 1555 2.63 LINK EU EU A 204 O1 APDC A 604 1555 1555 2.64 LINK EU EU A 202 O1 PDC A 402 1555 1555 2.64 LINK EU EU A 203 N1 PDC A 504 1555 1555 2.65 LINK EU EU A 202 O4 BPDC A 404 1555 1555 2.69 LINK EU EU A 202 O1 BPDC A 404 1555 1555 2.70 LINK EU EU A 202 O4 PDC A 402 1555 1555 2.72 LINK EU EU A 202 O1 APDC A 403 1555 1555 2.74 SITE 1 AC6 4 SER A 24 GLY A 26 GLN A 121 HOH A 846 SITE 1 AC7 6 CYS A 6 ARG A 112 CYS A 127 ARG A 128 SITE 2 AC7 6 HOH A 719 HOH A 824 SITE 1 AC8 11 GLY A 4 ARG A 5 CYS A 6 GLU A 7 SITE 2 AC8 11 TYR A 20 LYS A 96 LYS A 97 HOH A 720 SITE 3 AC8 11 HOH A 726 HOH A 728 HOH A 768 SITE 1 AC9 8 ASN A 93 LYS A 97 ARG A 112 LYS A 116 SITE 2 AC9 8 ARG A 128 HOH A 726 HOH A 787 HOH A 836 SITE 1 BC1 4 ARG A 125 GLY A 126 HOH A 786 HOH A 788 SITE 1 BC2 11 TYR A 20 ARG A 21 ARG A 125 GLY A 126 SITE 2 BC2 11 HOH A 707 HOH A 724 HOH A 729 HOH A 742 SITE 3 BC2 11 HOH A 806 HOH A 863 HOH A 877 SITE 1 BC3 11 TYR A 20 ARG A 21 ARG A 125 GLY A 126 SITE 2 BC3 11 HOH A 707 HOH A 724 HOH A 729 HOH A 742 SITE 3 BC3 11 HOH A 806 HOH A 863 HOH A 877 SITE 1 BC4 7 ARG A 61 TRP A 62 ARG A 68 ARG A 73 SITE 2 BC4 7 LEU A 84 SER A 85 SER A 86 SITE 1 BC5 4 ARG A 68 SER A 86 ASN A 103 HOH A 800 SITE 1 BC6 3 TRP A 62 HOH A 843 HOH A 880 SITE 1 BC7 9 ARG A 21 SER A 100 ASP A 101 GLY A 102 SITE 2 BC7 9 ASN A 103 GLY A 104 ALA A 122 HOH A 780 SITE 3 BC7 9 HOH A 844 SITE 1 BC8 6 ARG A 14 ARG A 21 GLN A 121 ARG A 125 SITE 2 BC8 6 HOH A 778 HOH A 827 SITE 1 BC9 6 TYR A 23 GLY A 102 ASN A 103 ASN A 106 SITE 2 BC9 6 HOH A 823 HOH A 831 SITE 1 CC1 6 ARG A 21 GLY A 22 TYR A 23 HOH A 822 SITE 2 CC1 6 HOH A 831 HOH A 835 CRYST1 50.266 33.779 69.683 90.00 108.22 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019894 0.000000 0.006549 0.00000 SCALE2 0.000000 0.029604 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015108 0.00000