HEADER OXIDOREDUCTASE 03-APR-07 2PES TITLE URATE OXIDASE IN COMPLEX WITH TRIS-DIPICOLINATE LUTETIUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: URICASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: URATE OXIDASE; COMPND 5 EC: 1.7.3.3 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ASPERGILLUS FLAVUS; SOURCE 3 ORGANISM_TAXID: 5059 KEYWDS URATE OXIDASE TRIS-DIPICOLINATE LUTETIUM 8-AZAXANTHIN X-RAY, KEYWDS 2 OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR G.POMPIDOR,J.VICAT,R.KAHN REVDAT 6 21-FEB-24 2PES 1 REMARK LINK REVDAT 5 21-MAR-12 2PES 1 JRNL REVDAT 4 13-JUL-11 2PES 1 VERSN REVDAT 3 30-JUN-10 2PES 1 JRNL REVDAT 2 24-FEB-09 2PES 1 VERSN REVDAT 1 22-APR-08 2PES 0 JRNL AUTH G.POMPIDOR,O.MAURY,J.VICAT,R.KAHN JRNL TITL A DIPICOLINATE LANTHANIDE COMPLEX FOR SOLVING PROTEIN JRNL TITL 2 STRUCTURES USING ANOMALOUS DIFFRACTION. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 66 762 2010 JRNL REFN ISSN 0907-4449 JRNL PMID 20606256 JRNL DOI 10.1107/S0907444910010954 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 15.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 3 NUMBER OF REFLECTIONS : 51652 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : 0.179 REMARK 3 FREE R VALUE : 0.195 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2605 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.64 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3625 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.71 REMARK 3 BIN R VALUE (WORKING SET) : 0.2200 REMARK 3 BIN FREE R VALUE SET COUNT : 170 REMARK 3 BIN FREE R VALUE : 0.2820 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2360 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 86 REMARK 3 SOLVENT ATOMS : 234 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 18.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.89 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.04000 REMARK 3 B22 (A**2) : -0.48000 REMARK 3 B33 (A**2) : -0.57000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.078 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.075 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.047 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.330 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.958 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.952 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2531 ; 0.011 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 2171 ; 0.005 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3441 ; 1.358 ; 1.964 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5071 ; 0.809 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 303 ; 5.930 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 115 ;38.700 ;24.522 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 426 ;13.297 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ; 8.793 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 373 ; 0.080 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2830 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 509 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 414 ; 0.200 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 2012 ; 0.200 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1228 ; 0.181 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 1287 ; 0.084 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 156 ; 0.152 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): 1 ; 0.153 ; 0.200 REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 19 ; 0.082 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 88 ; 0.177 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 28 ; 0.140 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1940 ; 1.783 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 605 ; 0.213 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2429 ; 1.664 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1261 ; 2.733 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1009 ; 3.936 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): 3 ;11.897 ; 3.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2PES COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-APR-07. REMARK 100 THE DEPOSITION ID IS D_1000042296. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-MAR-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM30A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979700, 1.341332 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 59288 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.518 REMARK 200 RESOLUTION RANGE LOW (A) : 47.673 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.6 REMARK 200 DATA REDUNDANCY : 6.600 REMARK 200 R MERGE (I) : 0.06600 REMARK 200 R SYM (I) : 0.06600 REMARK 200 FOR THE DATA SET : 4.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.52 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.60 REMARK 200 COMPLETENESS FOR SHELL (%) : 84.6 REMARK 200 DATA REDUNDANCY IN SHELL : 3.10 REMARK 200 R MERGE FOR SHELL (I) : 0.01100 REMARK 200 R SYM FOR SHELL (I) : 1.08400 REMARK 200 FOR SHELL : 0.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHARP, DM 5.0 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.32 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.95 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 5% PEG 8000, 0.1 TRIS, PH 8.5, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 39.77500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 47.66000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 52.16500 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 39.77500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 47.66000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 52.16500 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 39.77500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 47.66000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 52.16500 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 39.77500 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 47.66000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 52.16500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 33390 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 44610 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -99.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 79.55000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 95.32000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 79.55000 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 104.33000 REMARK 350 BIOMT1 4 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 95.32000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 104.33000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OH TYR A 65 O HOH A 512 1.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 118 27.47 -154.07 REMARK 500 SER A 124 159.12 83.43 REMARK 500 ASP A 175 108.03 -165.37 REMARK 500 SER A 226 164.87 178.37 REMARK 500 REMARK 500 REMARK: NULL REMARK 600 REMARK 600 HETEROGEN REMARK 600 REMARK 600 ACCORDING TO AUTHORS THE LIGAND PDC IS IN THE BASIC (DEPROTONATED) REMARK 600 FORM (C7H3N1O4) REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 LU A 296 LU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PDC A 302 N1 REMARK 620 2 PDC A 302 O1 67.2 REMARK 620 3 PDC A 302 O3 66.9 133.8 REMARK 620 4 PDC A 303 O1 70.3 80.2 89.8 REMARK 620 5 PDC A 303 N1 122.9 138.4 74.7 68.9 REMARK 620 6 PDC A 303 O3 132.9 141.7 72.9 133.8 65.4 REMARK 620 7 PDC A 304 O3 67.7 88.2 69.5 137.7 133.3 76.1 REMARK 620 8 PDC A 304 N1 118.8 68.2 133.0 137.1 118.4 73.6 71.1 REMARK 620 9 PDC A 304 O1 141.3 82.2 141.2 81.9 66.9 85.8 136.7 66.1 REMARK 620 N 1 2 3 4 5 6 7 8 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 LU A 297 LU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PDC A 305 O1 REMARK 620 2 PDC A 305 N1 72.3 REMARK 620 3 PDC A 305 O3 136.2 63.9 REMARK 620 4 PDC A 306 N1 132.1 116.7 73.6 REMARK 620 5 PDC A 306 O1 140.0 134.8 77.2 69.1 REMARK 620 6 PDC A 306 O3 82.2 64.8 81.2 64.4 132.5 REMARK 620 7 PDC A 307 N1 67.1 123.0 137.9 120.1 72.8 140.8 REMARK 620 8 PDC A 307 O1 87.7 146.3 131.0 58.4 77.4 86.2 69.5 REMARK 620 9 PDC A 307 O3 84.2 69.9 79.3 143.6 81.7 134.6 67.7 136.2 REMARK 620 N 1 2 3 4 5 6 7 8 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AZA A 300 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PDC A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PDC A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PDC A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PDC A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PDC A 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PDC A 307 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1R51 RELATED DB: PDB REMARK 900 URATE OXIDASE FROM ASPERGILLUS FLAVUS COMPLEXED WITH ITS INHIBITOR REMARK 900 8-AZAXANTHIN REMARK 900 RELATED ID: 2PC2 RELATED DB: PDB REMARK 900 LYSOZYME COMPLEXED WITH TRIS-DIPICOLINATE EUROPIUM REMARK 900 RELATED ID: 2PE7 RELATED DB: PDB REMARK 900 THAUMATIN I COMPLEXED WITH TRIS-DIPICOLINATE EUROPIUM DBREF 2PES A 1 295 UNP Q00511 URIC_ASPFL 2 296 SEQRES 1 A 295 SER ALA VAL LYS ALA ALA ARG TYR GLY LYS ASP ASN VAL SEQRES 2 A 295 ARG VAL TYR LYS VAL HIS LYS ASP GLU LYS THR GLY VAL SEQRES 3 A 295 GLN THR VAL TYR GLU MET THR VAL CYS VAL LEU LEU GLU SEQRES 4 A 295 GLY GLU ILE GLU THR SER TYR THR LYS ALA ASP ASN SER SEQRES 5 A 295 VAL ILE VAL ALA THR ASP SER ILE LYS ASN THR ILE TYR SEQRES 6 A 295 ILE THR ALA LYS GLN ASN PRO VAL THR PRO PRO GLU LEU SEQRES 7 A 295 PHE GLY SER ILE LEU GLY THR HIS PHE ILE GLU LYS TYR SEQRES 8 A 295 ASN HIS ILE HIS ALA ALA HIS VAL ASN ILE VAL CYS HIS SEQRES 9 A 295 ARG TRP THR ARG MET ASP ILE ASP GLY LYS PRO HIS PRO SEQRES 10 A 295 HIS SER PHE ILE ARG ASP SER GLU GLU LYS ARG ASN VAL SEQRES 11 A 295 GLN VAL ASP VAL VAL GLU GLY LYS GLY ILE ASP ILE LYS SEQRES 12 A 295 SER SER LEU SER GLY LEU THR VAL LEU LYS SER THR ASN SEQRES 13 A 295 SER GLN PHE TRP GLY PHE LEU ARG ASP GLU TYR THR THR SEQRES 14 A 295 LEU LYS GLU THR TRP ASP ARG ILE LEU SER THR ASP VAL SEQRES 15 A 295 ASP ALA THR TRP GLN TRP LYS ASN PHE SER GLY LEU GLN SEQRES 16 A 295 GLU VAL ARG SER HIS VAL PRO LYS PHE ASP ALA THR TRP SEQRES 17 A 295 ALA THR ALA ARG GLU VAL THR LEU LYS THR PHE ALA GLU SEQRES 18 A 295 ASP ASN SER ALA SER VAL GLN ALA THR MET TYR LYS MET SEQRES 19 A 295 ALA GLU GLN ILE LEU ALA ARG GLN GLN LEU ILE GLU THR SEQRES 20 A 295 VAL GLU TYR SER LEU PRO ASN LYS HIS TYR PHE GLU ILE SEQRES 21 A 295 ASP LEU SER TRP HIS LYS GLY LEU GLN ASN THR GLY LYS SEQRES 22 A 295 ASN ALA GLU VAL PHE ALA PRO GLN SER ASP PRO ASN GLY SEQRES 23 A 295 LEU ILE LYS CYS THR VAL GLY ARG SER HET LU A 296 1 HET LU A 297 1 HET LU A 298 1 HET AZA A 300 11 HET PDC A 302 12 HET PDC A 303 12 HET PDC A 304 12 HET PDC A 305 12 HET PDC A 306 12 HET PDC A 307 12 HETNAM LU LUTETIUM (III) ION HETNAM AZA 8-AZAXANTHINE HETNAM PDC PYRIDINE-2,6-DICARBOXYLIC ACID HETSYN LU LU HETSYN PDC DIPICOLINIC ACID FORMUL 2 LU 3(LU 3+) FORMUL 5 AZA C4 H3 N5 O2 FORMUL 6 PDC 6(C7 H5 N O4) FORMUL 12 HOH *234(H2 O) HELIX 1 1 ILE A 42 LYS A 48 1 7 HELIX 2 2 ASP A 50 ILE A 54 5 5 HELIX 3 3 ALA A 56 ASN A 71 1 16 HELIX 4 4 PRO A 75 TYR A 91 1 17 HELIX 5 5 GLY A 193 HIS A 200 1 8 HELIX 6 6 HIS A 200 ASP A 222 1 23 HELIX 7 7 SER A 226 GLN A 242 1 17 HELIX 8 8 THR A 271 ALA A 275 5 5 SHEET 1 A 8 TYR A 8 LYS A 20 0 SHEET 2 A 8 GLN A 27 GLY A 40 -1 O LEU A 38 N TYR A 8 SHEET 3 A 8 ILE A 94 HIS A 104 -1 O HIS A 98 N LEU A 37 SHEET 4 A 8 LYS A 127 VAL A 135 -1 O VAL A 132 N VAL A 99 SHEET 5 A 8 ILE A 140 LYS A 153 -1 O ASP A 141 N ASP A 133 SHEET 6 A 8 LEU A 178 TRP A 188 -1 O VAL A 182 N LEU A 149 SHEET 7 A 8 ILE A 245 ASN A 254 -1 O GLU A 249 N THR A 185 SHEET 8 A 8 GLY A 286 GLY A 293 -1 O VAL A 292 N VAL A 248 SHEET 1 B 2 THR A 107 ILE A 111 0 SHEET 2 B 2 LYS A 114 ILE A 121 -1 O HIS A 116 N MET A 109 SHEET 1 C 2 TYR A 257 GLU A 259 0 SHEET 2 C 2 PHE A 278 PRO A 280 -1 O ALA A 279 N PHE A 258 LINK LU LU A 296 N1 PDC A 302 1555 1555 2.41 LINK LU LU A 296 O1 PDC A 302 1555 1555 2.52 LINK LU LU A 296 O3 PDC A 302 1555 1555 2.60 LINK LU LU A 296 O1 PDC A 303 1555 1555 2.34 LINK LU LU A 296 N1 PDC A 303 1555 1555 2.38 LINK LU LU A 296 O3 PDC A 303 1555 1555 2.53 LINK LU LU A 296 O3 PDC A 304 1555 1555 2.29 LINK LU LU A 296 N1 PDC A 304 1555 1555 2.33 LINK LU LU A 296 O1 PDC A 304 1555 1555 2.63 LINK LU LU A 297 O1 PDC A 305 1555 1555 2.24 LINK LU LU A 297 N1 PDC A 305 1555 1555 2.35 LINK LU LU A 297 O3 PDC A 305 1555 1555 2.62 LINK LU LU A 297 N1 PDC A 306 1555 1555 2.38 LINK LU LU A 297 O1 PDC A 306 1555 1555 2.47 LINK LU LU A 297 O3 PDC A 306 1555 1555 2.70 LINK LU LU A 297 N1 PDC A 307 1555 1555 2.31 LINK LU LU A 297 O1 PDC A 307 1555 1555 2.49 LINK LU LU A 297 O3 PDC A 307 1555 1555 2.58 CISPEP 1 THR A 74 PRO A 75 0 -6.12 CISPEP 2 ASP A 283 PRO A 284 0 -5.66 SITE 1 AC3 9 ILE A 54 ALA A 56 THR A 57 PHE A 159 SITE 2 AC3 9 ARG A 176 SER A 226 GLN A 228 ASN A 254 SITE 3 AC3 9 HOH A 324 SITE 1 AC4 4 PRO A 202 LYS A 203 ALA A 206 GLN A 242 SITE 1 AC5 5 SER A 199 HIS A 200 PRO A 202 LYS A 203 SITE 2 AC5 5 HOH A 480 SITE 1 AC6 1 HOH A 477 SITE 1 AC7 2 ARG A 164 HOH A 411 SITE 1 AC8 3 ARG A 164 ASP A 165 THR A 168 SITE 1 AC9 1 HOH A 477 CRYST1 79.550 95.320 104.330 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012571 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010491 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009585 0.00000