HEADER TRANSCRIPTION 16-APR-07 2PJL TITLE CRYSTAL STRUCTURE OF HUMAN ESTROGEN-RELATED RECEPTOR ALPHA IN COMPLEX TITLE 2 WITH A SYNTHETIC INVERSE AGONIST REVEALS ITS NOVEL MOLECULAR TITLE 3 MECHANISM COMPND MOL_ID: 1; COMPND 2 MOLECULE: STEROID HORMONE RECEPTOR ERR1; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: LIGAND BINDING DOMAIN; COMPND 5 SYNONYM: ESTROGEN-RELATED RECEPTOR, ALPHA, ERR- ALPHA, ESTROGEN COMPND 6 RECEPTOR-LIKE 1; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ESRRA, ERR1, ESRL1, NR3B1; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: SF9; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS KEYWDS NUCLEAR HORMONE RECEPTOR, LIGAND BINDING DOMAIN, LIGAND BINDING KEYWDS 2 POCKET, THREE-LAYERED ALPHA-HELICAL SANDWICH, INVERSE AGONIST, HELIX KEYWDS 3 12 (H12), COACTIVATOR GROOVE, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR J.KALLEN REVDAT 7 30-AUG-23 2PJL 1 REMARK REVDAT 6 20-OCT-21 2PJL 1 REMARK SEQADV REVDAT 5 18-OCT-17 2PJL 1 REMARK REVDAT 4 13-JUL-11 2PJL 1 VERSN REVDAT 3 24-FEB-09 2PJL 1 VERSN REVDAT 2 25-DEC-07 2PJL 1 JRNL REVDAT 1 12-JUN-07 2PJL 0 JRNL AUTH J.KALLEN,R.LATTMANN,R.BEERLI,A.BLECHSCHMIDT,M.J.BLOMMERS, JRNL AUTH 2 M.GEISER,J.OTTL,J.M.SCHLAEPPI,A.STRAUSS,B.FOURNIER JRNL TITL CRYSTAL STRUCTURE OF HUMAN ESTROGEN-RELATED RECEPTOR ALPHA JRNL TITL 2 IN COMPLEX WITH A SYNTHETIC INVERSE AGONIST REVEALS ITS JRNL TITL 3 NOVEL MOLECULAR MECHANISM. JRNL REF J.BIOL.CHEM. V. 282 23231 2007 JRNL REFN ISSN 0021-9258 JRNL PMID 17556356 JRNL DOI 10.1074/JBC.M703337200 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 20528 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.222 REMARK 3 R VALUE (WORKING SET) : 0.219 REMARK 3 FREE R VALUE : 0.281 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1056 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.36 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1416 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.53 REMARK 3 BIN R VALUE (WORKING SET) : 0.2770 REMARK 3 BIN FREE R VALUE SET COUNT : 81 REMARK 3 BIN FREE R VALUE : 0.3630 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3388 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 50 REMARK 3 SOLVENT ATOMS : 236 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 48.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 42.43 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.86000 REMARK 3 B22 (A**2) : 0.86000 REMARK 3 B33 (A**2) : -1.29000 REMARK 3 B12 (A**2) : 0.43000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.451 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.287 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.205 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.255 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.942 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.898 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3490 ; 0.008 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4722 ; 1.127 ; 2.021 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 430 ; 4.433 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 144 ;35.015 ;24.028 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 628 ;16.513 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 26 ;20.057 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 564 ; 0.067 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2528 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1677 ; 0.195 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2409 ; 0.292 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 217 ; 0.175 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 56 ; 0.177 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 8 ; 0.250 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2256 ; 0.489 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3446 ; 0.848 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1423 ; 1.062 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1276 ; 1.685 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2PJL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-APR-07. REMARK 100 THE DEPOSITION ID IS D_1000042448. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-OCT-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8000 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20542 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 12.50 REMARK 200 R MERGE (I) : 0.06800 REMARK 200 R SYM (I) : 0.06800 REMARK 200 FOR THE DATA SET : 13.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 10.40 REMARK 200 R MERGE FOR SHELL (I) : 0.24200 REMARK 200 R SYM FOR SHELL (I) : 0.24200 REMARK 200 FOR SHELL : 4.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1XB7 WITH H12 REMOVED REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.83 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.23 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M MGCL2, 12%PEG400, 0.1M HEPES, REMARK 280 PH7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 X+2/3,Y+1/3,Z+1/3 REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 7555 X+1/3,Y+2/3,Z+2/3 REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 48.23250 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 27.84705 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 44.86333 REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 48.23250 REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 27.84705 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 44.86333 REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 48.23250 REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 27.84705 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 44.86333 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 55.69409 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 89.72667 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 55.69409 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 89.72667 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 55.69409 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 89.72667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL UNIT IS A DIMER AS IN THE ASYMMETRIC UNIT REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 21560 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 48960 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -116.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 273 REMARK 465 SER A 274 REMARK 465 SER A 275 REMARK 465 HIS A 276 REMARK 465 HIS A 277 REMARK 465 HIS A 278 REMARK 465 HIS A 279 REMARK 465 HIS A 280 REMARK 465 HIS A 281 REMARK 465 PRO A 309 REMARK 465 ASP A 310 REMARK 465 PRO A 311 REMARK 465 ALA A 312 REMARK 465 GLY A 313 REMARK 465 PRO A 314 REMARK 465 ASP A 315 REMARK 465 GLY A 316 REMARK 465 HIS A 317 REMARK 465 ARG A 462 REMARK 465 ALA A 463 REMARK 465 GLY A 464 REMARK 465 PRO A 465 REMARK 465 GLY A 466 REMARK 465 GLY A 467 REMARK 465 GLY A 468 REMARK 465 ALA A 469 REMARK 465 GLU A 470 REMARK 465 MET A 518 REMARK 465 ASP A 519 REMARK 465 GLY B 273 REMARK 465 SER B 274 REMARK 465 SER B 275 REMARK 465 HIS B 276 REMARK 465 HIS B 277 REMARK 465 HIS B 278 REMARK 465 HIS B 279 REMARK 465 HIS B 280 REMARK 465 HIS B 281 REMARK 465 PRO B 309 REMARK 465 ASP B 310 REMARK 465 PRO B 311 REMARK 465 ALA B 312 REMARK 465 GLY B 313 REMARK 465 PRO B 314 REMARK 465 ASP B 315 REMARK 465 GLY B 316 REMARK 465 HIS B 317 REMARK 465 ARG B 462 REMARK 465 ALA B 463 REMARK 465 GLY B 464 REMARK 465 PRO B 465 REMARK 465 GLY B 466 REMARK 465 GLY B 467 REMARK 465 GLY B 468 REMARK 465 ALA B 469 REMARK 465 GLU B 470 REMARK 465 MET B 518 REMARK 465 ASP B 519 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO B 375 21.84 -78.12 REMARK 500 ALA B 414 6.43 -69.01 REMARK 500 ALA B 460 -71.02 -72.20 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 047 A 600 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 047 B 700 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1XB7 RELATED DB: PDB REMARK 900 X-RAY STRUCTURE OF APO ERRALPHA LBD IN COMPLEX WITH A PGC-1ALPHA REMARK 900 PEPTIDE AT 2.5A RESOLUTION DBREF 2PJL A 289 519 UNP P11474 ERR1_HUMAN 289 519 DBREF 2PJL B 289 519 UNP P11474 ERR1_HUMAN 289 519 SEQADV 2PJL GLY A 273 UNP P11474 CLONING ARTIFACT SEQADV 2PJL SER A 274 UNP P11474 CLONING ARTIFACT SEQADV 2PJL SER A 275 UNP P11474 CLONING ARTIFACT SEQADV 2PJL HIS A 276 UNP P11474 CLONING ARTIFACT SEQADV 2PJL HIS A 277 UNP P11474 CLONING ARTIFACT SEQADV 2PJL HIS A 278 UNP P11474 CLONING ARTIFACT SEQADV 2PJL HIS A 279 UNP P11474 CLONING ARTIFACT SEQADV 2PJL HIS A 280 UNP P11474 CLONING ARTIFACT SEQADV 2PJL HIS A 281 UNP P11474 CLONING ARTIFACT SEQADV 2PJL LEU A 282 UNP P11474 CLONING ARTIFACT SEQADV 2PJL GLU A 283 UNP P11474 CLONING ARTIFACT SEQADV 2PJL VAL A 284 UNP P11474 CLONING ARTIFACT SEQADV 2PJL LEU A 285 UNP P11474 CLONING ARTIFACT SEQADV 2PJL PHE A 286 UNP P11474 CLONING ARTIFACT SEQADV 2PJL GLN A 287 UNP P11474 CLONING ARTIFACT SEQADV 2PJL GLY A 288 UNP P11474 CLONING ARTIFACT SEQADV 2PJL SER A 325 UNP P11474 CYS 325 ENGINEERED MUTATION SEQADV 2PJL GLY B 273 UNP P11474 CLONING ARTIFACT SEQADV 2PJL SER B 274 UNP P11474 CLONING ARTIFACT SEQADV 2PJL SER B 275 UNP P11474 CLONING ARTIFACT SEQADV 2PJL HIS B 276 UNP P11474 CLONING ARTIFACT SEQADV 2PJL HIS B 277 UNP P11474 CLONING ARTIFACT SEQADV 2PJL HIS B 278 UNP P11474 CLONING ARTIFACT SEQADV 2PJL HIS B 279 UNP P11474 CLONING ARTIFACT SEQADV 2PJL HIS B 280 UNP P11474 CLONING ARTIFACT SEQADV 2PJL HIS B 281 UNP P11474 CLONING ARTIFACT SEQADV 2PJL LEU B 282 UNP P11474 CLONING ARTIFACT SEQADV 2PJL GLU B 283 UNP P11474 CLONING ARTIFACT SEQADV 2PJL VAL B 284 UNP P11474 CLONING ARTIFACT SEQADV 2PJL LEU B 285 UNP P11474 CLONING ARTIFACT SEQADV 2PJL PHE B 286 UNP P11474 CLONING ARTIFACT SEQADV 2PJL GLN B 287 UNP P11474 CLONING ARTIFACT SEQADV 2PJL GLY B 288 UNP P11474 CLONING ARTIFACT SEQADV 2PJL SER B 325 UNP P11474 CYS 325 ENGINEERED MUTATION SEQRES 1 A 247 GLY SER SER HIS HIS HIS HIS HIS HIS LEU GLU VAL LEU SEQRES 2 A 247 PHE GLN GLY PRO VAL ASN ALA LEU VAL SER HIS LEU LEU SEQRES 3 A 247 VAL VAL GLU PRO GLU LYS LEU TYR ALA MET PRO ASP PRO SEQRES 4 A 247 ALA GLY PRO ASP GLY HIS LEU PRO ALA VAL ALA THR LEU SEQRES 5 A 247 SER ASP LEU PHE ASP ARG GLU ILE VAL VAL THR ILE SER SEQRES 6 A 247 TRP ALA LYS SER ILE PRO GLY PHE SER SER LEU SER LEU SEQRES 7 A 247 SER ASP GLN MET SER VAL LEU GLN SER VAL TRP MET GLU SEQRES 8 A 247 VAL LEU VAL LEU GLY VAL ALA GLN ARG SER LEU PRO LEU SEQRES 9 A 247 GLN ASP GLU LEU ALA PHE ALA GLU ASP LEU VAL LEU ASP SEQRES 10 A 247 GLU GLU GLY ALA ARG ALA ALA GLY LEU GLY GLU LEU GLY SEQRES 11 A 247 ALA ALA LEU LEU GLN LEU VAL ARG ARG LEU GLN ALA LEU SEQRES 12 A 247 ARG LEU GLU ARG GLU GLU TYR VAL LEU LEU LYS ALA LEU SEQRES 13 A 247 ALA LEU ALA ASN SER ASP SER VAL HIS ILE GLU ASP ALA SEQRES 14 A 247 GLU ALA VAL GLU GLN LEU ARG GLU ALA LEU HIS GLU ALA SEQRES 15 A 247 LEU LEU GLU TYR GLU ALA GLY ARG ALA GLY PRO GLY GLY SEQRES 16 A 247 GLY ALA GLU ARG ARG ARG ALA GLY ARG LEU LEU LEU THR SEQRES 17 A 247 LEU PRO LEU LEU ARG GLN THR ALA GLY LYS VAL LEU ALA SEQRES 18 A 247 HIS PHE TYR GLY VAL LYS LEU GLU GLY LYS VAL PRO MET SEQRES 19 A 247 HIS LYS LEU PHE LEU GLU MET LEU GLU ALA MET MET ASP SEQRES 1 B 247 GLY SER SER HIS HIS HIS HIS HIS HIS LEU GLU VAL LEU SEQRES 2 B 247 PHE GLN GLY PRO VAL ASN ALA LEU VAL SER HIS LEU LEU SEQRES 3 B 247 VAL VAL GLU PRO GLU LYS LEU TYR ALA MET PRO ASP PRO SEQRES 4 B 247 ALA GLY PRO ASP GLY HIS LEU PRO ALA VAL ALA THR LEU SEQRES 5 B 247 SER ASP LEU PHE ASP ARG GLU ILE VAL VAL THR ILE SER SEQRES 6 B 247 TRP ALA LYS SER ILE PRO GLY PHE SER SER LEU SER LEU SEQRES 7 B 247 SER ASP GLN MET SER VAL LEU GLN SER VAL TRP MET GLU SEQRES 8 B 247 VAL LEU VAL LEU GLY VAL ALA GLN ARG SER LEU PRO LEU SEQRES 9 B 247 GLN ASP GLU LEU ALA PHE ALA GLU ASP LEU VAL LEU ASP SEQRES 10 B 247 GLU GLU GLY ALA ARG ALA ALA GLY LEU GLY GLU LEU GLY SEQRES 11 B 247 ALA ALA LEU LEU GLN LEU VAL ARG ARG LEU GLN ALA LEU SEQRES 12 B 247 ARG LEU GLU ARG GLU GLU TYR VAL LEU LEU LYS ALA LEU SEQRES 13 B 247 ALA LEU ALA ASN SER ASP SER VAL HIS ILE GLU ASP ALA SEQRES 14 B 247 GLU ALA VAL GLU GLN LEU ARG GLU ALA LEU HIS GLU ALA SEQRES 15 B 247 LEU LEU GLU TYR GLU ALA GLY ARG ALA GLY PRO GLY GLY SEQRES 16 B 247 GLY ALA GLU ARG ARG ARG ALA GLY ARG LEU LEU LEU THR SEQRES 17 B 247 LEU PRO LEU LEU ARG GLN THR ALA GLY LYS VAL LEU ALA SEQRES 18 B 247 HIS PHE TYR GLY VAL LYS LEU GLU GLY LYS VAL PRO MET SEQRES 19 B 247 HIS LYS LEU PHE LEU GLU MET LEU GLU ALA MET MET ASP HET 047 A 600 25 HET 047 B 700 25 HETNAM 047 1-CYCLOHEXYL-N-{[1-(4-METHYLPHENYL)-1H-INDOL-3- HETNAM 2 047 YL]METHYL}METHANAMINE FORMUL 3 047 2(C23 H28 N2) FORMUL 5 HOH *236(H2 O) HELIX 1 1 GLU A 283 GLY A 288 1 6 HELIX 2 2 PRO A 289 VAL A 300 1 12 HELIX 3 3 ALA A 320 LYS A 340 1 21 HELIX 4 4 GLY A 344 LEU A 348 5 5 HELIX 5 5 SER A 349 ARG A 372 1 24 HELIX 6 6 GLU A 390 ALA A 396 1 7 HELIX 7 7 GLU A 400 ALA A 414 1 15 HELIX 8 8 GLU A 418 ASN A 432 1 15 HELIX 9 9 ASP A 440 GLY A 461 1 22 HELIX 10 10 ARG A 471 LEU A 479 1 9 HELIX 11 11 THR A 480 LYS A 499 1 20 HELIX 12 12 LEU A 500 LYS A 503 5 4 HELIX 13 13 VAL A 504 ALA A 516 1 13 HELIX 14 14 GLU B 283 GLY B 288 1 6 HELIX 15 15 PRO B 289 VAL B 300 1 12 HELIX 16 16 ALA B 320 LYS B 340 1 21 HELIX 17 17 GLY B 344 LEU B 348 5 5 HELIX 18 18 SER B 349 ARG B 372 1 24 HELIX 19 19 ASP B 389 ALA B 396 1 8 HELIX 20 20 GLU B 400 ALA B 414 1 15 HELIX 21 21 GLU B 418 ASN B 432 1 15 HELIX 22 22 ASP B 440 GLY B 461 1 22 HELIX 23 23 ARG B 471 LEU B 479 1 9 HELIX 24 24 THR B 480 LYS B 499 1 20 HELIX 25 25 LEU B 500 LYS B 503 5 4 HELIX 26 26 VAL B 504 MET B 517 1 14 SHEET 1 A 2 GLU A 379 ALA A 383 0 SHEET 2 A 2 LEU A 386 ASP A 389 -1 O LEU A 388 N LEU A 380 SHEET 1 B 2 LEU B 380 ALA B 383 0 SHEET 2 B 2 LEU B 386 LEU B 388 -1 O LEU B 388 N LEU B 380 SITE 1 AC1 7 HOH A 5 VAL A 321 LEU A 324 GLU A 331 SITE 2 AC1 7 PHE A 382 GLY A 397 PHE A 495 SITE 1 AC2 10 HOH B 11 LEU B 324 PHE B 328 GLU B 331 SITE 2 AC2 10 PHE B 382 LEU B 386 GLY B 397 LEU B 398 SITE 3 AC2 10 PHE B 495 LEU B 500 CRYST1 96.465 96.465 134.590 90.00 90.00 120.00 H 3 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010366 0.005985 0.000000 0.00000 SCALE2 0.000000 0.011970 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007430 0.00000 CONECT 3391 3392 3395 3409 CONECT 3392 3391 3393 3408 CONECT 3393 3392 3394 3405 CONECT 3394 3393 3395 3396 CONECT 3395 3391 3394 CONECT 3396 3394 3397 CONECT 3397 3396 3398 CONECT 3398 3397 3399 CONECT 3399 3398 3400 3404 CONECT 3400 3399 3401 CONECT 3401 3400 3402 CONECT 3402 3401 3403 CONECT 3403 3402 3404 CONECT 3404 3399 3403 CONECT 3405 3393 3406 CONECT 3406 3405 3407 CONECT 3407 3406 3408 CONECT 3408 3392 3407 CONECT 3409 3391 3410 3414 CONECT 3410 3409 3411 CONECT 3411 3410 3412 CONECT 3412 3411 3413 3415 CONECT 3413 3412 3414 CONECT 3414 3409 3413 CONECT 3415 3412 CONECT 3416 3417 3420 3434 CONECT 3417 3416 3418 3433 CONECT 3418 3417 3419 3430 CONECT 3419 3418 3420 3421 CONECT 3420 3416 3419 CONECT 3421 3419 3422 CONECT 3422 3421 3423 CONECT 3423 3422 3424 CONECT 3424 3423 3425 3429 CONECT 3425 3424 3426 CONECT 3426 3425 3427 CONECT 3427 3426 3428 CONECT 3428 3427 3429 CONECT 3429 3424 3428 CONECT 3430 3418 3431 CONECT 3431 3430 3432 CONECT 3432 3431 3433 CONECT 3433 3417 3432 CONECT 3434 3416 3435 3439 CONECT 3435 3434 3436 CONECT 3436 3435 3437 CONECT 3437 3436 3438 3440 CONECT 3438 3437 3439 CONECT 3439 3434 3438 CONECT 3440 3437 MASTER 365 0 2 26 4 0 5 6 3674 2 50 38 END