HEADER TRANSFERASE 20-APR-07 2PLR TITLE CRYSTAL STRUCTURE OF DTMP KINASE (ST1543) FROM SULFOLOBUS TOKODAII TITLE 2 STRAIN7 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROBABLE THYMIDYLATE KINASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: DTMP KINASE; COMPND 5 EC: 2.7.4.9; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SULFOLOBUS TOKODAII; SOURCE 3 ORGANISM_TAXID: 273063; SOURCE 4 STRAIN: 7; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL-21 CONDON PLUS (DE3)-RIL-X; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET21A KEYWDS TMP-BINDING, ATP-BINDING, THYMIDYLATE KINASE, STRUCTURAL GENOMICS, KEYWDS 2 NPPSFA, NATIONAL PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL KEYWDS 3 ANALYSES, RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, KEYWDS 4 TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR S.P.KANAUJIA,J.JEYAKANTHAN,Z.A.RAFI,K.SEKAR,N.NAKAGAWA,A.EBIHARA, AUTHOR 2 S.KURAMITSU,A.SHINKAI,Y.SHIRO,S.YOKOYAMA,RIKEN STRUCTURAL AUTHOR 3 GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 5 15-NOV-23 2PLR 1 REMARK REVDAT 4 25-OCT-23 2PLR 1 REMARK LINK REVDAT 3 13-JUL-11 2PLR 1 VERSN REVDAT 2 24-FEB-09 2PLR 1 VERSN REVDAT 1 22-APR-08 2PLR 0 JRNL AUTH S.P.KANAUJIA,J.JEYAKANTHAN,Z.A.RAFI,K.SEKAR,N.NAKAGAWA, JRNL AUTH 2 A.EBIHARA,S.KURAMITSU,A.SHINKAI,Y.SHIRO,S.YOKOYAMA JRNL TITL CRYSTAL STRUCTURE OF DTMP KINASE (ST1543) FROM SULFOLOBUS JRNL TITL 2 TOKODAII STRAIN7 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.59 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 7231113.620 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 97.5 REMARK 3 NUMBER OF REFLECTIONS : 56045 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.185 REMARK 3 FREE R VALUE : 0.209 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.200 REMARK 3 FREE R VALUE TEST SET COUNT : 5695 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.003 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 8 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.67 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 89.60 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 5684 REMARK 3 BIN R VALUE (WORKING SET) : 0.2440 REMARK 3 BIN FREE R VALUE : 0.2840 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 10.00 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 632 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.011 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3427 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 222 REMARK 3 SOLVENT ATOMS : 521 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 18.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.06000 REMARK 3 B22 (A**2) : -2.04000 REMARK 3 B33 (A**2) : -1.02000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.17 REMARK 3 ESD FROM SIGMAA (A) : 0.12 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.19 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.14 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.005 REMARK 3 BOND ANGLES (DEGREES) : 1.200 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 20.30 REMARK 3 IMPROPER ANGLES (DEGREES) : 2.720 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.37 REMARK 3 BSOL : 64.91 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : LIGAND.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 5 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 6 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : LIGAND.TOP REMARK 3 TOPOLOGY FILE 3 : ION.TOP REMARK 3 TOPOLOGY FILE 5 : WATER_PROTIN.TOP REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2PLR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 06-JUL-07. REMARK 100 THE DEPOSITION ID IS D_1000042516. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-JUN-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL26B2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9789, 0.9793, 0.9000 REMARK 200 MONOCHROMATOR : SI-1 1 1 DOUBLE CRYSTAL REMARK 200 MONOCHROMATOR REMARK 200 OPTICS : RH COATED BENT-CYRINDRICAL REMARK 200 MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS V REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 57129 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.04100 REMARK 200 R SYM (I) : 0.04300 REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.66 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.5 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.20900 REMARK 200 R SYM FOR SHELL (I) : 0.23000 REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 2PBR REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.16 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50% PEG 200, 100MM HEPES, PH 7.5, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 24.76150 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 68.66600 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 31.43650 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 68.66600 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 24.76150 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 31.43650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8300 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22140 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 1.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 1 REMARK 465 MSE B 1 REMARK 465 LYS B 2 REMARK 465 TRP B 39 REMARK 465 ASN B 40 REMARK 465 SER B 41 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 43 -149.33 -111.28 REMARK 500 ARG A 93 132.84 82.22 REMARK 500 TYR A 94 -154.98 -129.86 REMARK 500 LYS A 143 -5.83 76.05 REMARK 500 LEU B 58 100.80 -161.35 REMARK 500 TYR B 78 -64.21 -127.74 REMARK 500 TYR B 94 -164.20 -127.09 REMARK 500 LYS B 143 48.66 -81.85 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 214 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 215 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 1901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1PE B 1301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1PE A 1302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1PE B 1303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PGE A 1401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PGE A 1402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PGE A 1404 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1501 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 1502 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 1503 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1504 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1505 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 B 1601 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DTT A 1701 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EPE A 1801 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 1201 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 1202 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG B 1203 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 1204 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 1206 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 1207 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 1208 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG B 1209 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG B 1210 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG B 1211 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2PBR RELATED DB: PDB REMARK 900 THE SAME PROTEIN FROM AQUIFEX AEOLICUS VF5 REMARK 900 RELATED ID: STO001001543.1 RELATED DB: TARGETDB DBREF 2PLR A 1 213 UNP Q970Q8 KTHY2_SULTO 1 213 DBREF 2PLR B 1 213 UNP Q970Q8 KTHY2_SULTO 1 213 SEQRES 1 A 213 MSE LYS LYS GLY VAL LEU ILE ALA PHE GLU GLY ILE ASP SEQRES 2 A 213 GLY SER GLY LYS SER SER GLN ALA THR LEU LEU LYS ASP SEQRES 3 A 213 TRP ILE GLU LEU LYS ARG ASP VAL TYR LEU THR GLU TRP SEQRES 4 A 213 ASN SER SER ASP TRP ILE HIS ASP ILE ILE LYS GLU ALA SEQRES 5 A 213 LYS LYS LYS ASP LEU LEU THR PRO LEU THR PHE SER LEU SEQRES 6 A 213 ILE HIS ALA THR ASP PHE SER ASP ARG TYR GLU ARG TYR SEQRES 7 A 213 ILE LEU PRO MSE LEU LYS SER GLY PHE ILE VAL ILE SER SEQRES 8 A 213 ASP ARG TYR ILE TYR THR ALA TYR ALA ARG ASP SER VAL SEQRES 9 A 213 ARG GLY VAL ASP ILE ASP TRP VAL LYS LYS LEU TYR SER SEQRES 10 A 213 PHE ALA ILE LYS PRO ASP ILE THR PHE TYR ILE ARG VAL SEQRES 11 A 213 SER PRO ASP ILE ALA LEU GLU ARG ILE LYS LYS SER LYS SEQRES 12 A 213 ARG LYS ILE LYS PRO GLN GLU ALA GLY ALA ASP ILE PHE SEQRES 13 A 213 PRO GLY LEU SER PRO GLU GLU GLY PHE LEU LYS TYR GLN SEQRES 14 A 213 GLY LEU ILE THR GLU VAL TYR ASP LYS LEU VAL LYS ASP SEQRES 15 A 213 GLU ASN PHE ILE VAL ILE ASP GLY THR LYS THR PRO LYS SEQRES 16 A 213 GLU ILE GLN ILE GLN ILE ARG LYS PHE VAL GLY GLU LEU SEQRES 17 A 213 ILE ASP ASN SER PHE SEQRES 1 B 213 MSE LYS LYS GLY VAL LEU ILE ALA PHE GLU GLY ILE ASP SEQRES 2 B 213 GLY SER GLY LYS SER SER GLN ALA THR LEU LEU LYS ASP SEQRES 3 B 213 TRP ILE GLU LEU LYS ARG ASP VAL TYR LEU THR GLU TRP SEQRES 4 B 213 ASN SER SER ASP TRP ILE HIS ASP ILE ILE LYS GLU ALA SEQRES 5 B 213 LYS LYS LYS ASP LEU LEU THR PRO LEU THR PHE SER LEU SEQRES 6 B 213 ILE HIS ALA THR ASP PHE SER ASP ARG TYR GLU ARG TYR SEQRES 7 B 213 ILE LEU PRO MSE LEU LYS SER GLY PHE ILE VAL ILE SER SEQRES 8 B 213 ASP ARG TYR ILE TYR THR ALA TYR ALA ARG ASP SER VAL SEQRES 9 B 213 ARG GLY VAL ASP ILE ASP TRP VAL LYS LYS LEU TYR SER SEQRES 10 B 213 PHE ALA ILE LYS PRO ASP ILE THR PHE TYR ILE ARG VAL SEQRES 11 B 213 SER PRO ASP ILE ALA LEU GLU ARG ILE LYS LYS SER LYS SEQRES 12 B 213 ARG LYS ILE LYS PRO GLN GLU ALA GLY ALA ASP ILE PHE SEQRES 13 B 213 PRO GLY LEU SER PRO GLU GLU GLY PHE LEU LYS TYR GLN SEQRES 14 B 213 GLY LEU ILE THR GLU VAL TYR ASP LYS LEU VAL LYS ASP SEQRES 15 B 213 GLU ASN PHE ILE VAL ILE ASP GLY THR LYS THR PRO LYS SEQRES 16 B 213 GLU ILE GLN ILE GLN ILE ARG LYS PHE VAL GLY GLU LEU SEQRES 17 B 213 ILE ASP ASN SER PHE MODRES 2PLR MSE A 82 MET SELENOMETHIONINE MODRES 2PLR MSE B 82 MET SELENOMETHIONINE HET MSE A 82 8 HET MSE B 82 8 HET CL A 214 1 HET CL A 215 1 HET PO4 A1901 5 HET 1PE A1302 16 HET PGE A1401 10 HET PGE A1402 10 HET PGE A1404 10 HET EDO A1501 4 HET EDO A1504 4 HET EDO A1505 4 HET DTT A1701 8 HET EPE A1801 15 HET PEG A1201 7 HET PEG A1202 7 HET PEG A1204 7 HET PEG A1205 7 HET PEG A1206 7 HET PEG A1207 7 HET PEG A1208 7 HET 1PE B1301 16 HET 1PE B1303 16 HET EDO B1502 4 HET EDO B1503 4 HET EDO B1506 4 HET PG4 B1601 13 HET PEG B1203 7 HET PEG B1209 7 HET PEG B1210 7 HET PEG B1211 7 HETNAM MSE SELENOMETHIONINE HETNAM CL CHLORIDE ION HETNAM PO4 PHOSPHATE ION HETNAM 1PE PENTAETHYLENE GLYCOL HETNAM PGE TRIETHYLENE GLYCOL HETNAM EDO 1,2-ETHANEDIOL HETNAM DTT 2,3-DIHYDROXY-1,4-DITHIOBUTANE HETNAM EPE 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM PG4 TETRAETHYLENE GLYCOL HETSYN 1PE PEG400 HETSYN EDO ETHYLENE GLYCOL HETSYN DTT 1,4-DITHIOTHREITOL HETSYN EPE HEPES FORMUL 1 MSE 2(C5 H11 N O2 SE) FORMUL 3 CL 2(CL 1-) FORMUL 5 PO4 O4 P 3- FORMUL 6 1PE 3(C10 H22 O6) FORMUL 7 PGE 3(C6 H14 O4) FORMUL 10 EDO 6(C2 H6 O2) FORMUL 13 DTT C4 H10 O2 S2 FORMUL 14 EPE C8 H18 N2 O4 S FORMUL 15 PEG 11(C4 H10 O3) FORMUL 27 PG4 C8 H18 O5 FORMUL 32 HOH *521(H2 O) HELIX 1 1 GLY A 16 GLU A 29 1 14 HELIX 2 2 ASP A 43 LYS A 53 1 11 HELIX 3 3 THR A 59 TYR A 78 1 20 HELIX 4 4 TYR A 78 SER A 85 1 8 HELIX 5 5 TYR A 94 VAL A 104 1 11 HELIX 6 6 ASP A 108 TYR A 116 1 9 HELIX 7 7 SER A 131 SER A 142 1 12 HELIX 8 8 SER A 160 VAL A 180 1 21 HELIX 9 9 THR A 193 ASN A 211 1 19 HELIX 10 10 GLY B 16 GLU B 29 1 14 HELIX 11 11 SER B 42 LYS B 55 1 14 HELIX 12 12 THR B 59 TYR B 78 1 20 HELIX 13 13 TYR B 78 SER B 85 1 8 HELIX 14 14 TYR B 94 VAL B 104 1 11 HELIX 15 15 ASP B 108 TYR B 116 1 9 HELIX 16 16 SER B 131 LYS B 140 1 10 HELIX 17 17 SER B 160 VAL B 180 1 21 HELIX 18 18 THR B 193 ASP B 210 1 18 SHEET 1 A 5 VAL A 34 GLU A 38 0 SHEET 2 A 5 ILE A 88 ASP A 92 1 O ASP A 92 N THR A 37 SHEET 3 A 5 VAL A 5 GLU A 10 1 N ILE A 7 O VAL A 89 SHEET 4 A 5 ILE A 124 ARG A 129 1 O PHE A 126 N ALA A 8 SHEET 5 A 5 ILE A 186 ASP A 189 1 O ILE A 186 N THR A 125 SHEET 1 B 5 VAL B 34 LEU B 36 0 SHEET 2 B 5 ILE B 88 SER B 91 1 O ILE B 90 N TYR B 35 SHEET 3 B 5 VAL B 5 GLU B 10 1 N ILE B 7 O VAL B 89 SHEET 4 B 5 ILE B 124 ARG B 129 1 O PHE B 126 N ALA B 8 SHEET 5 B 5 ILE B 186 ASP B 189 1 O ILE B 186 N THR B 125 LINK C PRO A 81 N MSE A 82 1555 1555 1.33 LINK C MSE A 82 N LEU A 83 1555 1555 1.33 LINK C PRO B 81 N MSE B 82 1555 1555 1.33 LINK C MSE B 82 N LEU B 83 1555 1555 1.33 SITE 1 AC1 3 ASP A 13 ARG A 93 GLN A 169 SITE 1 AC2 4 ARG A 101 TYR A 168 HOH A2112 HOH A2185 SITE 1 AC3 9 ASP A 13 GLY A 14 SER A 15 GLY A 16 SITE 2 AC3 9 LYS A 17 SER A 18 HOH A2049 HOH A2094 SITE 3 AC3 9 HOH A2097 SITE 1 AC4 8 LYS A 113 ASP A 182 HOH A2003 ILE B 109 SITE 2 AC4 8 LEU B 159 LYS B 178 HOH B1619 HOH B1633 SITE 1 AC5 8 LYS A 114 SER A 117 HOH A2006 HOH A2023 SITE 2 AC5 8 TRP B 111 LYS B 114 GLU B 174 HOH B1649 SITE 1 AC6 4 ASP B 110 LYS B 114 ILE B 155 PHE B 156 SITE 1 AC7 5 SER A 103 GLU A 174 LYS A 178 GLY B 158 SITE 2 AC7 5 LEU B 159 SITE 1 AC8 3 ASP A 177 HOH A2138 PRO B 157 SITE 1 AC9 5 LYS A 140 LYS A 203 PHE A 204 GLU A 207 SITE 2 AC9 5 HOH A2200 SITE 1 BC1 3 GLU A 29 LYS A 31 ARG A 32 SITE 1 BC2 2 SER B 117 ALA B 119 SITE 1 BC3 2 LYS B 55 HOH B1626 SITE 1 BC4 2 ARG A 77 HOH A2017 SITE 1 BC5 4 TRP A 27 LYS A 31 ASP A 47 HOH A2197 SITE 1 BC6 7 LYS A 121 GLU A 183 HOH A1982 ARG B 129 SITE 2 BC6 7 ASP B 177 HOH B1719 HOH B1806 SITE 1 BC7 7 PRO A 60 PHE A 63 HIS A 67 ASP A 102 SITE 2 BC7 7 ARG A 105 ASP A 154 HOH A2134 SITE 1 BC8 8 TYR A 35 THR A 37 SER A 41 SER A 42 SITE 2 BC8 8 ASP A 43 ARG A 74 TYR A 78 HOH A2179 SITE 1 BC9 6 TRP A 39 HIS A 67 ASP A 70 ARG A 74 SITE 2 BC9 6 HOH A2037 HOH A2041 SITE 1 CC1 5 ASP A 108 TRP A 111 HOH A2000 HOH A2180 SITE 2 CC1 5 PHE B 118 SITE 1 CC2 5 SER A 117 ASP B 108 TRP B 111 HOH B1728 SITE 2 CC2 5 HOH B1733 SITE 1 CC3 2 GLY A 14 ARG A 138 SITE 1 CC4 3 ARG A 129 ASP A 177 HOH A1913 SITE 1 CC5 3 HOH A2131 HOH A2196 HOH A2206 SITE 1 CC6 6 ASN A 184 ILE A 186 HOH A2034 LYS B 181 SITE 2 CC6 6 HOH B1709 HOH B1800 SITE 1 CC7 7 ARG A 129 SER A 131 PRO A 132 THR A 173 SITE 2 CC7 7 LYS B 53 LYS B 54 ASP B 56 SITE 1 CC8 2 LEU B 58 ASP B 154 SITE 1 CC9 6 HOH A2021 LEU B 136 LYS B 140 GLU B 162 SITE 2 CC9 6 GLU B 163 LEU B 166 CRYST1 49.523 62.873 137.332 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020193 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015905 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007282 0.00000