HEADER PHOSPHOTRANSFERASE 05-AUG-92 2PMG OBSLTE 07-DEC-95 2PMG 3PMG TITLE THE CRYSTAL STRUCTURE OF MUSCLE PHOSPHOGLUCOMUTASE REFINED TITLE 2 AT 2.7 ANGSTROMS RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE:; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1 KEYWDS PHOSPHOTRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR W.J.RAYJUNIOR,J.-B.DAI,Y.LIU,M.KONNO REVDAT 2 08-MAR-95 2PMG 1 HELIX REVDAT 1 31-JAN-94 2PMG 0 JRNL AUTH J.-B.DAI,Y.LIU,W.J.RAY JUNIOR,M.KONNO JRNL TITL THE CRYSTAL STRUCTURE OF MUSCLE PHOSPHOGLUCOMUTASE JRNL TITL 2 REFINED AT 2.7 ANGSTROMS RESOLUTION JRNL REF J.BIOL.CHEM. V. 267 6322 1992 JRNL REFN ASTM JBCHA3 US ISSN 0021-9258 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH Z.-J.LIN,M.KONNO,C.ABAD-ZAPATERO,R.WIERENGA, REMARK 1 AUTH 2 M.R.N.MURTHY,W.J.RAY JUNIOR,M.G.ROSSMANN REMARK 1 TITL THE STRUCTURE OF RABBIT MUSCLE PHOSPHOGLUCOMUTASE REMARK 1 TITL 2 AT INTERMEDIATE RESOLUTION REMARK 1 REF J.BIOL.CHEM. V. 261 264 1986 REMARK 1 REFN ASTM JBCHA3 US ISSN 0021-9258 REMARK 1 REFERENCE 2 REMARK 1 AUTH W.J.RAY JUNIOR REMARK 1 TITL THE CATALYTIC ACTIVITY OF MUSCLE REMARK 1 TITL 2 PHOSPHOGLUCOMUTASE IN THE CRYSTALLINE PHASE REMARK 1 REF J.BIOL.CHEM. V. 261 275 1986 REMARK 1 REFN ASTM JBCHA3 US ISSN 0021-9258 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PROLSQ 2PMG REMARK 3 AUTHORS : KONNERT,HENDRICKSON REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 8.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : NULL REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : 0.223 REMARK 3 R VALUE (WORKING SET) : NULL REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 FIT/AGREEMENT OF MODEL WITH ALL DATA. REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : NULL REMARK 3 FREE R VALUE (NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 8658 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : 0.020 ; NULL REMARK 3 ANGLE DISTANCE (A) : 3.600 ; NULL REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : NULL ; NULL REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : NULL ; NULL REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : NULL ; NULL REMARK 3 MULTIPLE TORSION (A) : NULL ; NULL REMARK 3 H-BOND (X...Y) (A) : NULL ; NULL REMARK 3 H-BOND (X-H...Y) (A) : NULL ; NULL REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : NULL ; NULL REMARK 3 STAGGERED (DEGREES) : NULL ; NULL REMARK 3 TRANSVERSE (DEGREES) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2PMG COMPLIES WITH FORMAT V. 2.3, 09-JULY-1998 REMARK 5 REMARK 5 2PMG AVERAGE OF INDIVIDUALLY REFINED ATOMIC B VALUES = 40 REMARK 5 2PMG ANGSTROMS**2 (ALL 8658 ATOMS). AVERAGE OF INDIVIDUALLY REMARK 5 2PMG REFINED ATOMIC B VALUES FOR DOMAINS 1 - 3 2PMG = 30 REMARK 5 ANGSTROMS**2. 2PMG REMARK 6 REMARK 6 2PMG 538 PROBABLE H-BONDS BETWEEN MAIN CHAIN ATOMS/ REMARK 6 ASYMMETRIC 2PMG UNIT (DONOR-ACCEPTOR DISTANCE L.E. 3.4 REMARK 6 ANGSTROMS; 2PMG INTERACTION ENERGY CALCULATED BY EMIN REMARK 6 ROUTINE OF X-PLOR G. 2PMG E. |0.2| KCAL/MOLE. 2PMG REMARK 7 REMARK 7 2PMG 94 POSSIBLE H-BONDS BETWEEN MAIN CHAIN ATOMS/ REMARK 7 ASYMMETRIC 2PMG UNIT (DONOR-ACCEPTOR DISTANCE L.E. 3.8 REMARK 7 ANGSTROMS; 2PMG INTERACTION ENERGY G.E. |0.2| KCAL/MOLE 434 REMARK 7 H-BONDS 2PMG INVOLVING ONE OR TWO SIDECHAINS: LESS REMARK 7 STRINGENT CRITERIA, 2PMG ABOVE 338 OF 453 INTERNAL AMIDE REMARK 7 CARBONYLS (EXPOSED SURFACE 2PMG L.E. 5 ANGSTROMS**2) IN REMARK 7 DOMAINS 1 - 3 (75%) ACT AS H-BOND 2PMG ACCEPTORS (LESS REMARK 7 STRINGENT CRITERIA, ABOVE). 2PMG REMARK 8 REMARK 8 2PMG THE ENZYME NOMENCLATURE HANDBOOK INCORRECTLY USES 2PMG REMARK 8 GLUCOSE-1,6-DIPHOSPHATE INSTEAD OF BISPHOSPHATE. IN 2PMG REMARK 8 ADDITION THE SYSTEMATIC MANE WAS ASSIGNED ON THE BASIS OF REMARK 8 2PMG AN INCORRECT MECHANISM. THE SYSTEMATIC NAME SHOULD BE REMARK 8 2PMG ALPHA-D-GLUCOSE-1,6-PHOSPHOMUTASE, BY ANALOGY WITH REMARK 8 5.4.2.1. 2PMG REMARK 9 REMARK 9 2PMG THERE ARE TWO MONOMER COPIES PER ASYMMETRIC UNIT REMARK 9 ARRANGED 2PMG IN HELICES ALONG 41 AXES. MONOMER A IS THE REMARK 9 FIRST 2PMG ENCOUNTERED IN AN ASYMMETRIC UNIT AS ONE MOVES REMARK 9 CLOCKWISE 2PMG ALONG A 41 HELIX. AMINO ACID RESIDUES IN REMARK 9 MONOMERS A AND B 2PMG ARE DISTINGUISHED BY THE CHAIN REMARK 9 IDENTIFIERS *A* AND *B*, 2PMG RESPECTIVELY. THE REMARK 9 TRANSFORMATION PRESENTED ON *MTRIX* 2PMG RECORDS BELOW WILL REMARK 9 YIELD APPROXIMATE COORDINATES FOR CHAIN 2PMG *B* WHEN REMARK 9 APPLIED TO CHAIN *A*. 2PMG REMARK 10 REMARK 10 2PMG THE MONOMER CAN BE SUBDIVIDED INTO FOUR SEQUENCE REMARK 10 DOMAINS: 2PMG THE FINAL CHARACTER, 1-4, IN HELIX/SHEET REMARK 10 IDENTIFIERS 2PMG DESIGNATES THE DOMAIN. A SPATIAL REMARK 10 RELATIONSHIP EXISTS 2PMG BETWEEN GROUPS OF HELICES/STRANDS REMARK 10 IN DOMAINS 1-3. IN 2PMG ORDER TO EMPHASIZE THIS REMARK 10 RELATIONSHIP, A PORTION OF THE 2PMG SINGLE SHEET IN DOMAIN REMARK 10 1, B1, IS REPEATED AS S1. THUS, A 2PMG SPATIAL DOMAIN- REMARK 10 DOMAIN RELATIONSHIP EXISTS AMONG 2PMG STANDS/HELICES WHOSE REMARK 10 DESIGNATOR BEGINS WITH S1-S3 OR H1-H3 2PMG (SEE DAI ET AL. REMARK 10 (1992) J. BIOL. CHEM. 261, IN PRESS). 2PMG (REGISTRATION, REMARK 10 APPENDIX B,E, IS ASSIGNED WITH REGARD ONLY 2PMG TO H- REMARK 10 BONDING PATTERNS (DISREGARDING DIRECTIONAL 2PMG DIFFERENCES REMARK 10 BETWEEN STRANDS), USING THE FIRST RESIDUE OF 2PMG STRAND 1 REMARK 10 AS THE REFERENCE.) 2PMG REMARK 11 REMARK 11 2PMG THE TERMINI OF A NUMBER OF "ALPHA-HELIXES" EXHIBIT REMARK 11 2PMG H-BONDING PATTERNS CHARACTERISTIC OF OTHER TYPES OF REMARK 11 2PMG HELICES. SUCH RESIDUES ARE IDENTIFIED AS PART OF THE REMARK 11 2PMG HELIX WHEN AND ONLY WHEN THE H-BONDING PATTERN REMARK 11 INFERRED 2PMG FOR SUCH RESIDUES IN EITHER MONOMER A OR B IS REMARK 11 THAT OF AN 2PMG ALPHA-HELIX. SIMILARLY, AT THE EDGE OF A REMARK 11 SHEET A RESIDUE 2PMG IS INCLUDED AS A STRAND WHEN IT REMARK 11 APPEARS TO BE PART OF THE 2PMG H-BONDING PATTERN OF A SHEET REMARK 11 IN EITHER MONOMER. INCLUSION 2PMG OF A RESIDUE WITHIN A REMARK 11 SHEET OR HELIX IS BASED ON H-BONDING 2PMG PATTERNS REMARK 11 INVOLVING EITHER ITS CARBONYL OR AMIDE GROUPS, 2PMG REMARK 11 IRRESPECTIVE OF PHI/PSI VALUES. 2PMG REMARK 12 REMARK 12 2PMG THE BINDING SITE FOR THE ACTIVATING METAL-ION REMARK 12 (COORDINATES 2PMG NOT FURNISHED) IS ABBREVIATED MBS. 2PMG REMARK 13 REMARK 13 2PMG SUBSEQUENT TO THE PUBLICATION OF THE ABOVE MODEL, AND REMARK 13 2PMG SUBMISSION OF THE COORDINATES TO THE PROTEIN DATA REMARK 13 BANK, 2PMG NEW DIFFRACTION DATA WERE COLLECTED TO A REMARK 13 RESOLUTION OF 2.4 2PMG ANGSTROMS. DURING REFINEMENT OF THE REMARK 13 PUBLISHED MODEL WITH 2PMG THE NEW DATA, AN ERROR IN THE REMARK 13 TOPOLOGY OF THE 6-STRANDED 2PMG SHEET IN DOMAIN 4 WAS REMARK 13 DISCOVERED AND A NEW MODEL 2PMG CONSTRUCTED: PGM3. IN BOTH REMARK 13 A AND B MONOMERS OF THE 2PMG ASYMMETRIC UNIT OF THE NEW REMARK 13 MODEL, I.E., IN BOTH S4A AND 2PMG S4B, THE INITIAL AND REMARK 13 TERMINAL RESIDUES, THE SENSE, AND THE 2PMG REGISTRATION OF REMARK 13 STRANDS 1 - 6 OF THE SHEET ARE AS FOLLOWS: 2PMG (A/B558, A/ REMARK 13 B561, -, -); (A/B421, A/B431, -1, -6); (A/B511, 2PMG A/ REMARK 13 B521, -1, 0); (A/B496, A/B504, -1, +2); (A/B489, A/B494, REMARK 13 2PMG -1, +2); AND (A/B468, A/B471, -1, +2), RESPECTIVELY. REMARK 13 IN 2PMG THE NEW MODEL, WHICH INCLUDES MANY WATER MOLECULES, REMARK 13 THERE 2PMG ARE ONLY 4 VALUES OF DELTA(BONDS) GREATER THAN REMARK 13 0.1 A, AS 2PMG OPPOSED TO THE 46 IN THE PRESENT MODEL, AND REMARK 13 ONLY 8 VALUES 2PMG OF DELTA(ANGLES) GREATER THAN 15, AS REMARK 13 OPPOSED TO THE 63 IN 2PMG THE PRESENT MODEL. THE AUTHORS REMARK 13 EXPECT THAT THE COORDINATES 2PMG OF THE NEW MODEL WILL BE REMARK 13 DEPOSITED IN THE PROTEIN DATA BANK 2PMG SHORTLY. 2PMG REMARK 14 REMARK 14 2PMG THE COORDINATES IN THIS ENTRY ARE PRESENTED IN A 2PMG REMARK 14 NON-STANDARD ORIENTATION THAT IS REFLECTED IN THE *SCALE* REMARK 14 2PMG RECORDS BELOW. 2PMG REMARK 15 REMARK 15 2PMG CORRECTION. CORRECT HELIX RECORDS. 08-MAR-95. 2PMG REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.64 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.12 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,1/2+Z REMARK 290 3555 1/2-Y,1/2+X,1/4+Z REMARK 290 4555 1/2+Y,1/2-X,3/4+Z REMARK 290 5555 1/2-X,1/2+Y,1/4-Z REMARK 290 6555 1/2+X,1/2-Y,3/4-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,1/2-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.999891 0.014796 0.000144 0.37401 REMARK 290 SMTRY2 2 0.014760 0.999702 0.019411 50.54859 REMARK 290 SMTRY3 2 0.000143 0.019425 -0.999811 0.49103 REMARK 290 SMTRY1 3 0.000000 -0.002314 0.999878 122.39961 REMARK 290 SMTRY2 3 0.017088 0.999851 0.002325 24.21181 REMARK 290 SMTRY3 3 -1.000000 0.017112 0.000128 16.77162 REMARK 290 SMTRY1 4 0.000000 0.017110 -0.999735 122.77361 REMARK 290 SMTRY2 4 -0.002327 0.999851 0.017085 74.76040 REMARK 290 SMTRY3 4 1.000116 0.002314 0.000000 17.26265 REMARK 290 SMTRY1 5 0.265602 0.000000 -0.963977 122.39961 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 24.21181 REMARK 290 SMTRY3 5 -0.964188 0.000000 -0.265602 16.77162 REMARK 290 SMTRY1 6 -0.265711 -0.014796 0.963834 122.77361 REMARK 290 SMTRY2 6 -0.014778 -0.999702 -0.019397 74.76040 REMARK 290 SMTRY3 6 0.964045 -0.019425 0.265413 17.26265 REMARK 290 SMTRY1 7 0.963957 -0.017110 0.265446 0.00000 REMARK 290 SMTRY2 7 -0.017074 -0.999851 -0.002308 0.00000 REMARK 290 SMTRY3 7 0.265575 -0.002314 -0.964105 0.00000 REMARK 290 SMTRY1 8 -0.964066 0.002314 -0.265589 0.37401 REMARK 290 SMTRY2 8 0.002314 -0.999851 -0.017103 50.54859 REMARK 290 SMTRY3 8 -0.265718 -0.017112 0.963917 0.49103 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT REMARK 300 WHICH CONSISTS OF 2 CHAIN(S). SEE REMARK 350 FOR REMARK 300 INFORMATION ON GENERATING THE BIOLOGICAL MOLECULE(S). REMARK 350 REMARK 350 GENERATING THE BIOMOLECULE REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES: ENGH AND HUBER, 1991 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLU A 47 N - CA - C ANGL. DEV. = 28.1 DEGREES REMARK 500 PHE B 458 N - CA - C ANGL. DEV. = 24.8 DEGREES REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 153 159.29 63.75 REMARK 500 SER A 484 -147.68 178.59 REMARK 500 SER B 116 -115.99 57.26 REMARK 500 ILE B 153 125.63 30.44 REMARK 500 ALA B 446 -105.77 175.70 REMARK 500 LEU B 503 -95.21 -173.06 SEQRES 1 A 561 VAL LYS ILE VAL THR VAL LYS THR LYS ALA TYR PRO ASP SEQRES 2 A 561 GLN LYS PRO GLY THR SER GLY LEU ARG LYS ARG VAL LYS SEQRES 3 A 561 VAL PHE GLN SER SER THR ASN TYR ALA GLU ASN PHE ILE SEQRES 4 A 561 GLN SER ILE ILE SER THR VAL GLU PRO ALA GLN ARG GLN SEQRES 5 A 561 GLU ALA THR LEU VAL VAL GLY GLY ASP GLY ARG PHE TYR SEQRES 6 A 561 MET LYS GLU ALA ILE GLN LEU ILE VAL ARG ILE ALA ALA SEQRES 7 A 561 ALA ASN GLY ILE GLY ARG LEU VAL ILE GLY GLN ASN GLY SEQRES 8 A 561 ILE LEU SER THR PRO ALA VAL SER CYS ILE ILE ARG LYS SEQRES 9 A 561 ILE LYS ALA ILE GLY GLY ILE ILE LEU THR ALA SER HIS SEQRES 10 A 561 ASN PRO GLY GLY PRO ASN GLY ASP PHE GLY ILE LYS PHE SEQRES 11 A 561 ASN ILE SER ASN GLY GLY PRO ALA PRO GLU ALA ILE THR SEQRES 12 A 561 ASP LYS ILE PHE GLN ILE SER LYS THR ILE GLU GLU TYR SEQRES 13 A 561 ALA ILE CYS PRO ASP LEU LYS VAL ASP LEU GLY VAL LEU SEQRES 14 A 561 GLY LYS GLN GLN PHE ASP LEU GLU ASN LYS PHE LYS PRO SEQRES 15 A 561 PHE THR VAL GLU ILE VAL ASP SER VAL GLU ALA TYR ALA SEQRES 16 A 561 THR MET LEU ARG ASN ILE PHE ASP PHE ASN ALA LEU LYS SEQRES 17 A 561 GLU LEU LEU SER GLY PRO ASN ARG LEU LYS ILE ARG ILE SEQRES 18 A 561 ASP ALA MET HIS GLY VAL VAL GLY PRO TYR VAL LYS LYS SEQRES 19 A 561 ILE LEU CYS GLU GLU LEU GLY ALA PRO ALA ASN SER ALA SEQRES 20 A 561 VAL ASN CYS VAL PRO LEU GLU ASP PHE GLY GLY HIS HIS SEQRES 21 A 561 PRO ASP PRO ASN LEU THR TYR ALA ALA ASP LEU VAL GLU SEQRES 22 A 561 THR MET LYS SER GLY GLU HIS ASP PHE GLY ALA ALA PHE SEQRES 23 A 561 ASP GLY ASP GLY ASP ARG ASN MET ILE LEU GLY LYS HIS SEQRES 24 A 561 GLY PHE PHE VAL ASN PRO SER ASP SER VAL ALA VAL ILE SEQRES 25 A 561 ALA ALA ASN ILE PHE SER ILE PRO TYR PHE GLN GLN THR SEQRES 26 A 561 GLY VAL ARG GLY PHE ALA ARG SER MET PRO THR SER GLY SEQRES 27 A 561 ALA LEU ASP ARG VAL ALA ASN ALA THR LYS ILE ALA LEU SEQRES 28 A 561 TYR GLU THR PRO THR GLY TRP LYS PHE PHE GLY ASN LEU SEQRES 29 A 561 MET ASP ALA SER LYS LEU SER LEU CYS GLY GLU GLU SER SEQRES 30 A 561 PHE GLY THR GLY SER ASP HIS ILE ARG GLU LYS ASP GLY SEQRES 31 A 561 LEU TRP ALA VAL LEU ALA TRP LEU SER ILE LEU ALA THR SEQRES 32 A 561 ARG LYS GLN SER VAL GLU ASP ILE LEU LYS ASP HIS TRP SEQRES 33 A 561 HIS LYS PHE GLY ARG ASN PHE PHE THR ARG TYR ASP TYR SEQRES 34 A 561 GLU GLU VAL GLU ALA GLU GLY ALA THR LYS MET MET LYS SEQRES 35 A 561 ASP LEU GLU ALA LEU MET PHE ASP ARG SER PHE VAL GLY SEQRES 36 A 561 LYS GLN PHE SER ALA ASN ASP LYS VAL TYR THR VAL GLU SEQRES 37 A 561 LYS ALA ASP ASN PHE GLU TYR HIS ASP PRO VAL ASP GLY SEQRES 38 A 561 SER VAL SER LYS ASN GLN GLY LEU ARG LEU ILE PHE ALA SEQRES 39 A 561 ASP GLY SER ARG ILE ILE PHE ARG LEU SER GLY THR GLY SEQRES 40 A 561 SER ALA GLY ALA THR ILE ARG LEU TYR ILE ASP SER TYR SEQRES 41 A 561 GLU LYS ASP ASN ALA LYS ILE ASN GLN ASP PRO GLN VAL SEQRES 42 A 561 MET LEU ALA PRO LEU ILE SER ILE ALA LEU LYS VAL SER SEQRES 43 A 561 GLN LEU GLN GLU ARG THR GLY ARG THR ALA PRO THR VAL SEQRES 44 A 561 ILE THR SEQRES 1 B 561 VAL LYS ILE VAL THR VAL LYS THR LYS ALA TYR PRO ASP SEQRES 2 B 561 GLN LYS PRO GLY THR SER GLY LEU ARG LYS ARG VAL LYS SEQRES 3 B 561 VAL PHE GLN SER SER THR ASN TYR ALA GLU ASN PHE ILE SEQRES 4 B 561 GLN SER ILE ILE SER THR VAL GLU PRO ALA GLN ARG GLN SEQRES 5 B 561 GLU ALA THR LEU VAL VAL GLY GLY ASP GLY ARG PHE TYR SEQRES 6 B 561 MET LYS GLU ALA ILE GLN LEU ILE VAL ARG ILE ALA ALA SEQRES 7 B 561 ALA ASN GLY ILE GLY ARG LEU VAL ILE GLY GLN ASN GLY SEQRES 8 B 561 ILE LEU SER THR PRO ALA VAL SER CYS ILE ILE ARG LYS SEQRES 9 B 561 ILE LYS ALA ILE GLY GLY ILE ILE LEU THR ALA SER HIS SEQRES 10 B 561 ASN PRO GLY GLY PRO ASN GLY ASP PHE GLY ILE LYS PHE SEQRES 11 B 561 ASN ILE SER ASN GLY GLY PRO ALA PRO GLU ALA ILE THR SEQRES 12 B 561 ASP LYS ILE PHE GLN ILE SER LYS THR ILE GLU GLU TYR SEQRES 13 B 561 ALA ILE CYS PRO ASP LEU LYS VAL ASP LEU GLY VAL LEU SEQRES 14 B 561 GLY LYS GLN GLN PHE ASP LEU GLU ASN LYS PHE LYS PRO SEQRES 15 B 561 PHE THR VAL GLU ILE VAL ASP SER VAL GLU ALA TYR ALA SEQRES 16 B 561 THR MET LEU ARG ASN ILE PHE ASP PHE ASN ALA LEU LYS SEQRES 17 B 561 GLU LEU LEU SER GLY PRO ASN ARG LEU LYS ILE ARG ILE SEQRES 18 B 561 ASP ALA MET HIS GLY VAL VAL GLY PRO TYR VAL LYS LYS SEQRES 19 B 561 ILE LEU CYS GLU GLU LEU GLY ALA PRO ALA ASN SER ALA SEQRES 20 B 561 VAL ASN CYS VAL PRO LEU GLU ASP PHE GLY GLY HIS HIS SEQRES 21 B 561 PRO ASP PRO ASN LEU THR TYR ALA ALA ASP LEU VAL GLU SEQRES 22 B 561 THR MET LYS SER GLY GLU HIS ASP PHE GLY ALA ALA PHE SEQRES 23 B 561 ASP GLY ASP GLY ASP ARG ASN MET ILE LEU GLY LYS HIS SEQRES 24 B 561 GLY PHE PHE VAL ASN PRO SER ASP SER VAL ALA VAL ILE SEQRES 25 B 561 ALA ALA ASN ILE PHE SER ILE PRO TYR PHE GLN GLN THR SEQRES 26 B 561 GLY VAL ARG GLY PHE ALA ARG SER MET PRO THR SER GLY SEQRES 27 B 561 ALA LEU ASP ARG VAL ALA ASN ALA THR LYS ILE ALA LEU SEQRES 28 B 561 TYR GLU THR PRO THR GLY TRP LYS PHE PHE GLY ASN LEU SEQRES 29 B 561 MET ASP ALA SER LYS LEU SER LEU CYS GLY GLU GLU SER SEQRES 30 B 561 PHE GLY THR GLY SER ASP HIS ILE ARG GLU LYS ASP GLY SEQRES 31 B 561 LEU TRP ALA VAL LEU ALA TRP LEU SER ILE LEU ALA THR SEQRES 32 B 561 ARG LYS GLN SER VAL GLU ASP ILE LEU LYS ASP HIS TRP SEQRES 33 B 561 HIS LYS PHE GLY ARG ASN PHE PHE THR ARG TYR ASP TYR SEQRES 34 B 561 GLU GLU VAL GLU ALA GLU GLY ALA THR LYS MET MET LYS SEQRES 35 B 561 ASP LEU GLU ALA LEU MET PHE ASP ARG SER PHE VAL GLY SEQRES 36 B 561 LYS GLN PHE SER ALA ASN ASP LYS VAL TYR THR VAL GLU SEQRES 37 B 561 LYS ALA ASP ASN PHE GLU TYR HIS ASP PRO VAL ASP GLY SEQRES 38 B 561 SER VAL SER LYS ASN GLN GLY LEU ARG LEU ILE PHE ALA SEQRES 39 B 561 ASP GLY SER ARG ILE ILE PHE ARG LEU SER GLY THR GLY SEQRES 40 B 561 SER ALA GLY ALA THR ILE ARG LEU TYR ILE ASP SER TYR SEQRES 41 B 561 GLU LYS ASP ASN ALA LYS ILE ASN GLN ASP PRO GLN VAL SEQRES 42 B 561 MET LEU ALA PRO LEU ILE SER ILE ALA LEU LYS VAL SER SEQRES 43 B 561 GLN LEU GLN GLU ARG THR GLY ARG THR ALA PRO THR VAL SEQRES 44 B 561 ILE THR HELIX 1 H01 LYS A 23 SER A 31 1SEE REMARK 10 ABOVE. 9 HELIX 2 H11 TYR A 34 SER A 44 1 11 HELIX 3 H21 TYR A 65 GLY A 81 1 17 HELIX 4 H31 SER A 94 ILE A 105 1 12 HELIX 5 H41 PRO A 139 LYS A 151 1 13 HELIX 6 H02 VAL A 191 PHE A 202 1 12 HELIX 7 HT2 ASP A 203 GLY A 213 1 11 HELIX 8 H22 GLY A 229 GLY A 241 1 13 HELIX 9 H32 ALA A 269 LYS A 276 1 8 HELIX 10 H13 ASN A 304 ASN A 315 1 12 HELIX 11 HT3 ILE A 319 GLY A 326 1 8 HELIX 12 H23 GLY A 338 THR A 347 1 10 HELIX 13 H33 GLY A 357 ALA A 367 1 11 HELIX 14 H43 ASP A 389 LYS A 405 1 17 HELIX 15 HF3 SER A 407 PHE A 419 1 13 HELIX 16 A14 ASN A 461 GLU A 474 1 14 HELIX 17 A24 ILE A 513 ALA A 525 1 13 HELIX 18 H0B LYS B 23 SER B 31 1SEE REMARK 10 ABOVE. 9 HELIX 19 H1B TYR B 34 SER B 44 1 11 HELIX 20 H2B TYR B 65 GLY B 81 1 17 HELIX 21 H3B SER B 94 ILE B 105 1 12 HELIX 22 H4B PRO B 139 LYS B 151 1 13 HELIX 23 H0B VAL B 191 PHE B 202 1 12 HELIX 24 HTB ASP B 203 GLY B 213 1 11 HELIX 25 H2B GLY B 229 GLY B 241 1 13 HELIX 26 H3B ALA B 269 LYS B 276 1 8 HELIX 27 H1B ASN B 304 ASN B 315 1 12 HELIX 28 HTB ILE B 319 GLY B 326 1 8 HELIX 29 H2B GLY B 338 THR B 347 1 10 HELIX 30 H3B GLY B 357 ALA B 367 1 11 HELIX 31 H4B ASP B 389 LYS B 405 1 17 HELIX 32 HFB SER B 407 PHE B 419 1 13 HELIX 33 B14 ASN B 461 GLU B 474 1 14 HELIX 34 B24 ILE B 513 ALA B 525 1 13 SHEET 1 B1 7 LEU A 21 LYS A 23 0 SHEET 2 B1 7 PHE A 126 ASN A 131 -1 SHEET 3 B1 7 GLY A 109 THR A 114 -1 SHEET 4 B1 7 LEU A 56 ASP A 61 1 SHEET 5 B1 7 GLY A 83 GLY A 88 1 SHEET 6 B1 7 PHE A 183 VAL A 188 1 SHEET 7 B1 7 GLY A 170 PHE A 174 -1 SHEET 1 S1 4 GLY A 83 GLY A 88 0 SHEET 2 S1 4 LEU A 56 ASP A 61 1 SHEET 3 S1 4 GLY A 109 THR A 114 1 SHEET 4 S1 4 PHE A 126 ASN A 131 -1 SHEET 1 S2 4 SER A 246 VAL A 248 0 SHEET 2 S2 4 LYS A 218 ALA A 223 1 SHEET 3 S2 4 PHE A 282 PHE A 286 1 SHEET 4 S2 4 MET A 294 LEU A 296 -1 SHEET 1 S3 4 ALA A 350 THR A 354 0 SHEET 2 S3 4 GLY A 329 MET A 334 1 SHEET 3 S3 4 SER A 371 GLU A 375 1 SHEET 4 S3 4 GLY A 379 ASP A 383 -1 SHEET 1 S4 6 GLU A 433 LYS A 439 0 SHEET 2 S4 6 ARG A 421 GLU A 431 -1 SHEET 3 S4 6 LEU A 447 GLN A 457 1 SHEET 4 S4 6 SER A 482 LEU A 491 1 SHEET 5 S4 6 ASP A 495 SER A 504 -1 SHEET 6 S4 6 MET A 534 LEU A 538 -1 SHEET 1 1B 7 LEU B 21 LYS B 23 0 SHEET 2 1B 7 PHE B 126 ASN B 131 -1 SHEET 3 1B 7 GLY B 109 THR B 114 -1 SHEET 4 1B 7 LEU B 56 ASP B 61 1 SHEET 5 1B 7 GLY B 83 GLY B 88 1 SHEET 6 1B 7 PHE B 183 VAL B 188 1 SHEET 7 1B 7 GLY B 170 PHE B 174 -1 SHEET 1 1S 4 GLY B 83 GLY B 88 0 SHEET 2 1S 4 LEU B 56 ASP B 61 1 SHEET 3 1S 4 GLY B 109 THR B 114 1 SHEET 4 1S 4 PHE B 126 ASN B 131 -1 SHEET 1 2S 4 SER B 246 VAL B 248 0 SHEET 2 2S 4 LYS B 218 ALA B 223 1 SHEET 3 2S 4 PHE B 282 PHE B 286 1 SHEET 4 2S 4 MET B 294 LEU B 296 -1 SHEET 1 3S 4 ALA B 350 THR B 354 0 SHEET 2 3S 4 GLY B 329 MET B 334 1 SHEET 3 3S 4 SER B 371 GLU B 375 1 SHEET 4 3S 4 GLY B 379 ASP B 383 -1 SHEET 1 4S 6 GLU B 433 LYS B 439 0 SHEET 2 4S 6 ARG B 421 GLU B 431 -1 SHEET 3 4S 6 LEU B 447 GLN B 457 1 SHEET 4 4S 6 SER B 482 LEU B 491 1 SHEET 5 4S 6 ASP B 495 SER B 504 -1 SHEET 6 4S 6 MET B 534 LEU B 538 -1 SITE 1 MBA 4 ASP A 287 ASP A 289 ASP A 291 SER A 116 SITE 1 MBB 4 ASP B 287 ASP B 289 ASP B 291 SER B 116 CRYST1 174.400 174.400 101.100 90.00 90.00 90.00 P 41 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.003474 -0.000070 0.004560 0.00000 SCALE2 0.004561 0.000000 -0.003474 0.50224 SCALE3 0.000073 0.009890 0.000096 0.42029 MTRIX1 1 -0.999522 0.028993 0.010692 -1.38033 1 MTRIX2 1 -0.028509 -0.998671 0.042946 -1.50489 1 MTRIX3 1 0.011923 0.042620 0.999020 -1.06663 1