HEADER SIGNALLING PROTEIN 30-JUN-92 2PNB TITLE STRUCTURE OF AN SH2 DOMAIN OF THE P85 ALPHA SUBUNIT OF TITLE 2 PHOSPHATIDYLINOSITOL-3-OH KINASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOSPHATIDYLINOSITOL 3-KINASE P85-ALPHA SUBUNIT N-TERMINAL COMPND 3 SH2 DOMAIN; COMPND 4 CHAIN: A; COMPND 5 EC: 2.7.1.137; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 3 ORGANISM_COMMON: CATTLE; SOURCE 4 ORGANISM_TAXID: 9913 KEYWDS SIGNALLING PROTEIN EXPDTA SOLUTION NMR AUTHOR G.W.BOOKER,A.L.BREEZE,A.K.DOWNING,G.PANAYOTOU,I.GOUT,M.D.WATERFIELD, AUTHOR 2 I.D.CAMPBELL REVDAT 4 01-MAY-24 2PNB 1 REMARK REVDAT 3 29-NOV-17 2PNB 1 REMARK HELIX REVDAT 2 24-FEB-09 2PNB 1 VERSN REVDAT 1 31-JAN-94 2PNB 0 JRNL AUTH G.W.BOOKER,A.L.BREEZE,A.K.DOWNING,G.PANAYOTOU,I.GOUT, JRNL AUTH 2 M.D.WATERFIELD,I.D.CAMPBELL JRNL TITL STRUCTURE OF AN SH2 DOMAIN OF THE P85 ALPHA SUBUNIT OF JRNL TITL 2 PHOSPHATIDYLINOSITOL-3-OH KINASE. JRNL REF NATURE V. 358 684 1992 JRNL REFN ISSN 0028-0836 JRNL PMID 1323062 JRNL DOI 10.1038/358684A0 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2PNB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000178488. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : NULL REMARK 210 PH : NULL REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : NULL REMARK 210 SAMPLE CONTENTS : NULL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : NULL REMARK 210 SPECTROMETER FIELD STRENGTH : NULL REMARK 210 SPECTROMETER MODEL : NULL REMARK 210 SPECTROMETER MANUFACTURER : NULL REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : NULL REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : NULL REMARK 210 CONFORMERS, NUMBER SUBMITTED : 1 REMARK 210 CONFORMERS, SELECTION CRITERIA : NULL REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 TRP A 22 CG TRP A 22 CD2 -0.117 REMARK 500 TRP A 24 CG TRP A 24 CD2 -0.129 REMARK 500 HIS A 54 CG HIS A 54 ND1 -0.120 REMARK 500 HIS A 74 CG HIS A 74 ND1 -0.122 REMARK 500 HIS A 96 CG HIS A 96 ND1 -0.120 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 TRP A 22 CG - CD1 - NE1 ANGL. DEV. = -6.0 DEGREES REMARK 500 TRP A 22 NE1 - CE2 - CZ2 ANGL. DEV. = 9.4 DEGREES REMARK 500 TRP A 22 NE1 - CE2 - CD2 ANGL. DEV. = -7.3 DEGREES REMARK 500 TRP A 24 CG - CD1 - NE1 ANGL. DEV. = -6.7 DEGREES REMARK 500 TRP A 24 NE1 - CE2 - CZ2 ANGL. DEV. = 9.4 DEGREES REMARK 500 TRP A 24 NE1 - CE2 - CD2 ANGL. DEV. = -7.3 DEGREES REMARK 500 TRP A 24 CG - CD2 - CE3 ANGL. DEV. = -5.7 DEGREES REMARK 500 ARG A 29 CG - CD - NE ANGL. DEV. = 17.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 19 -24.00 -170.09 REMARK 500 ALA A 20 170.78 53.03 REMARK 500 GLU A 21 -63.17 -108.36 REMARK 500 ASP A 26 119.92 68.77 REMARK 500 ILE A 27 -130.52 -140.56 REMARK 500 GLU A 34 -27.73 -36.32 REMARK 500 ASP A 38 76.10 -151.18 REMARK 500 ALA A 40 -169.16 -54.27 REMARK 500 ASP A 41 58.96 -104.94 REMARK 500 ALA A 49 67.24 -103.98 REMARK 500 LYS A 52 -19.49 -172.58 REMARK 500 MET A 53 17.78 49.69 REMARK 500 ASP A 56 -90.02 -85.87 REMARK 500 TYR A 57 -151.94 -138.53 REMARK 500 LYS A 63 45.16 -92.00 REMARK 500 ARG A 75 -67.88 -133.00 REMARK 500 PHE A 81 -29.06 -148.06 REMARK 500 SER A 82 -49.28 -146.23 REMARK 500 PRO A 84 50.44 -69.40 REMARK 500 LEU A 85 82.92 51.97 REMARK 500 THR A 86 -33.12 -149.37 REMARK 500 ASN A 88 20.68 45.71 REMARK 500 LEU A 93 -71.50 -67.36 REMARK 500 ILE A 94 -34.89 -39.73 REMARK 500 GLU A 100 -105.43 -100.53 REMARK 500 SER A 101 136.98 172.60 REMARK 500 TYR A 105 -83.66 -56.35 REMARK 500 PRO A 107 -171.99 -65.26 REMARK 500 LYS A 108 -13.04 56.64 REMARK 500 LEU A 109 -159.72 -151.38 REMARK 500 LEU A 114 39.64 -95.05 REMARK 500 SER A 118 -160.54 -172.39 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 29 0.32 SIDE CHAIN REMARK 500 ARG A 47 0.29 SIDE CHAIN REMARK 500 ARG A 62 0.12 SIDE CHAIN REMARK 500 ARG A 75 0.29 SIDE CHAIN REMARK 500 ARG A 98 0.14 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: PYB REMARK 800 EVIDENCE_CODE: UNKNOWN REMARK 800 SITE_DESCRIPTION: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2PNA RELATED DB: PDB DBREF 2PNB A 17 120 UNP P23727 P85A_BOVIN 328 431 SEQRES 1 A 104 LEU GLN ASP ALA GLU TRP TYR TRP GLY ASP ILE SER ARG SEQRES 2 A 104 GLU GLU VAL ASN GLU LYS LEU ARG ASP THR ALA ASP GLY SEQRES 3 A 104 THR PHE LEU VAL ARG ASP ALA SER THR LYS MET HIS GLY SEQRES 4 A 104 ASP TYR THR LEU THR LEU ARG LYS GLY GLY ASN ASN LYS SEQRES 5 A 104 LEU ILE LYS ILE PHE HIS ARG ASP GLY LYS TYR GLY PHE SEQRES 6 A 104 SER ASP PRO LEU THR PHE ASN SER VAL VAL GLU LEU ILE SEQRES 7 A 104 ASN HIS TYR ARG ASN GLU SER LEU ALA GLN TYR ASN PRO SEQRES 8 A 104 LYS LEU ASP VAL LYS LEU LEU TYR PRO VAL SER LYS TYR HELIX 1 H1 SER A 28 ARG A 37 1 10 HELIX 2 H2 SER A 89 GLU A 100 1 12 SHEET 1 B1 3 THR A 43 ARG A 47 0 SHEET 2 B1 3 THR A 58 ARG A 62 -1 N THR A 58 O ARG A 47 SHEET 3 B1 3 ASN A 67 LYS A 71 -1 N LYS A 68 O LEU A 61 SHEET 1 B2 2 ILE A 72 HIS A 74 0 SHEET 2 B2 2 TYR A 79 PHE A 81 -1 N GLY A 80 O PHE A 73 SHEET 1 B3 2 SER A 101 ALA A 103 0 SHEET 2 B3 2 ASP A 110 LYS A 112 -1 N VAL A 111 O LEU A 102 SITE 1 PYB 3 ARG A 29 ARG A 47 LEU A 69 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000