HEADER HYDROLASE 26-APR-07 2POK TITLE CRYSTAL STRUCTURE OF A M20 FAMILY METALLO PEPTIDASE FROM STREPTOCOCCUS TITLE 2 PNEUMONIAE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PEPTIDASE, M20/M25/M40 FAMILY; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS PNEUMONIAE; SOURCE 3 ORGANISM_TAXID: 170187; SOURCE 4 STRAIN: TIGR4; SOURCE 5 ATCC: BAA-334; SOURCE 6 GENE: SP_0150; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS M20 FAMILY PEPTIDASE, METALLO PROTEIN, MCSG, STRUCTURAL GENOMICS, KEYWDS 2 PSI-2, PROTEIN STRUCTURE INITIATIVE, MIDWEST CENTER FOR STRUCTURAL KEYWDS 3 GENOMICS, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR G.MINASOV,L.SHUVALOVA,J.S.BRUNZELLE,I.I.VORONTSOV,O.KIRYUKHINA, AUTHOR 2 F.R.COLLART,A.JOACHIMIAK,W.F.ANDERSON,MIDWEST CENTER FOR STRUCTURAL AUTHOR 3 GENOMICS (MCSG) REVDAT 6 21-FEB-24 2POK 1 HETSYN REVDAT 5 29-JUL-20 2POK 1 COMPND REMARK SEQADV HETNAM REVDAT 5 2 1 LINK SITE REVDAT 4 18-OCT-17 2POK 1 REMARK REVDAT 3 13-JUL-11 2POK 1 VERSN REVDAT 2 24-FEB-09 2POK 1 VERSN REVDAT 1 08-MAY-07 2POK 0 JRNL AUTH G.MINASOV,L.SHUVALOVA,J.S.BRUNZELLE,I.I.VORONTSOV, JRNL AUTH 2 O.KIRYUKHINA,F.R.COLLART,A.JOACHIMIAK,W.F.ANDERSON JRNL TITL CRYSTAL STRUCTURE OF A M20 FAMILY METALLO PEPTIDASE FROM JRNL TITL 2 STREPTOCOCCUS PNEUMONIAE. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 79025 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.181 REMARK 3 R VALUE (WORKING SET) : 0.178 REMARK 3 FREE R VALUE : 0.226 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4150 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5618 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.11 REMARK 3 BIN R VALUE (WORKING SET) : 0.2780 REMARK 3 BIN FREE R VALUE SET COUNT : 302 REMARK 3 BIN FREE R VALUE : 0.3270 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7261 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 50 REMARK 3 SOLVENT ATOMS : 817 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.49 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.86000 REMARK 3 B22 (A**2) : -1.66000 REMARK 3 B33 (A**2) : 4.52000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.146 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.142 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.127 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.559 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.965 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.943 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7584 ; 0.014 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 10274 ; 1.555 ; 1.971 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 914 ; 4.784 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 387 ;34.260 ;24.729 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1325 ;12.401 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 44 ;15.662 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1136 ; 0.102 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5788 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 3595 ; 0.220 ; 0.300 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 5256 ; 0.321 ; 0.500 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 1173 ; 0.223 ; 0.700 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 45 ; 0.210 ; 0.300 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 31 ; 0.202 ; 0.700 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 4710 ; 1.289 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 7380 ; 1.940 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3238 ; 3.222 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2894 ; 5.081 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2POK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-MAY-07. REMARK 100 THE DEPOSITION ID IS D_1000042609. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-JUL-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : SI REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 83179 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.06200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.36700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MIRAS REMARK 200 SOFTWARE USED: SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.52 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.44 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M AMMONIUM ACETATE, 0.5M SODIUM REMARK 280 CHLORIDE, 20% W/V PEG 3350, PH 8.3, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 43.97700 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 59.03700 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 50.96100 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 59.03700 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 43.97700 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 50.96100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: CHAINS A AND B FORM THE BIOLOGICAL ASSEMBLY, DIMER. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6390 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 36500 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -52.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -23 REMARK 465 HIS A -22 REMARK 465 HIS A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 SER A -16 REMARK 465 SER A -15 REMARK 465 GLY A -14 REMARK 465 VAL A -13 REMARK 465 ASP A -12 REMARK 465 LEU A -11 REMARK 465 GLY A -10 REMARK 465 THR A -9 REMARK 465 GLU A -8 REMARK 465 ASN A -7 REMARK 465 LEU A -6 REMARK 465 TYR A -5 REMARK 465 PHE A -4 REMARK 465 GLN A -3 REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 MET B -23 REMARK 465 HIS B -22 REMARK 465 HIS B -21 REMARK 465 HIS B -20 REMARK 465 HIS B -19 REMARK 465 HIS B -18 REMARK 465 HIS B -17 REMARK 465 SER B -16 REMARK 465 SER B -15 REMARK 465 GLY B -14 REMARK 465 VAL B -13 REMARK 465 ASP B -12 REMARK 465 LEU B -11 REMARK 465 GLY B -10 REMARK 465 THR B -9 REMARK 465 GLU B -8 REMARK 465 ASN B -7 REMARK 465 LEU B -6 REMARK 465 TYR B -5 REMARK 465 PHE B -4 REMARK 465 GLN B -3 REMARK 465 SER B -2 REMARK 465 ASN B -1 REMARK 465 ALA B 0 REMARK 465 MET B 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 97 N - CA - C ANGL. DEV. = 16.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 39 -1.37 59.34 REMARK 500 ASP A 97 -150.23 45.72 REMARK 500 SER A 159 55.78 -115.26 REMARK 500 LEU A 247 72.31 -100.52 REMARK 500 GLU A 275 -5.54 -54.65 REMARK 500 PRO A 406 20.42 -78.82 REMARK 500 HIS A 431 -0.75 67.27 REMARK 500 ASP B 97 -175.82 88.36 REMARK 500 LEU B 247 76.49 -100.75 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 460 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 90 NE2 REMARK 620 2 ASP A 123 OD1 67.5 REMARK 620 3 GLU A 184 OE2 92.8 126.8 REMARK 620 4 GLN A 185 NE2 139.3 77.8 91.4 REMARK 620 5 HOH A 609 O 97.9 85.2 147.9 99.6 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 460 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 90 NE2 REMARK 620 2 ASP B 123 OD1 73.1 REMARK 620 3 GLU B 184 OE1 85.7 116.2 REMARK 620 4 GLU B 184 OE2 94.7 167.3 58.3 REMARK 620 5 GLN B 185 NE2 166.6 99.3 88.0 92.1 REMARK 620 6 HOH B 573 O 96.9 90.0 153.1 94.7 94.1 REMARK 620 N 1 2 3 4 5 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC80199 RELATED DB: TARGETDB DBREF 2POK A 1 457 UNP Q97T10 Q97T10_STRPN 1 457 DBREF 2POK B 1 457 UNP Q97T10 Q97T10_STRPN 1 457 SEQADV 2POK MET A -23 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK HIS A -22 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK HIS A -21 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK HIS A -20 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK HIS A -19 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK HIS A -18 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK HIS A -17 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK SER A -16 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK SER A -15 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK GLY A -14 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK VAL A -13 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK ASP A -12 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK LEU A -11 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK GLY A -10 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK THR A -9 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK GLU A -8 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK ASN A -7 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK LEU A -6 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK TYR A -5 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK PHE A -4 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK GLN A -3 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK SER A -2 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK ASN A -1 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK ALA A 0 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK MET B -23 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK HIS B -22 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK HIS B -21 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK HIS B -20 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK HIS B -19 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK HIS B -18 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK HIS B -17 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK SER B -16 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK SER B -15 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK GLY B -14 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK VAL B -13 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK ASP B -12 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK LEU B -11 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK GLY B -10 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK THR B -9 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK GLU B -8 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK ASN B -7 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK LEU B -6 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK TYR B -5 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK PHE B -4 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK GLN B -3 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK SER B -2 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK ASN B -1 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK ALA B 0 UNP Q97T10 CLONING ARTIFACT SEQRES 1 A 481 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 481 GLY THR GLU ASN LEU TYR PHE GLN SER ASN ALA MET VAL SEQRES 3 A 481 PHE PRO SER GLU GLN GLU GLN ILE GLU LYS PHE GLU LYS SEQRES 4 A 481 ASP HIS VAL ALA GLN HIS TYR PHE GLU VAL LEU ARG THR SEQRES 5 A 481 LEU ILE SER LYS LYS SER VAL PHE ALA GLN GLN VAL GLY SEQRES 6 A 481 LEU LYS GLU VAL ALA ASN TYR LEU GLY GLU ILE PHE LYS SEQRES 7 A 481 ARG VAL GLY ALA GLU VAL GLU ILE ASP GLU SER TYR THR SEQRES 8 A 481 ALA PRO PHE VAL MET ALA HIS PHE LYS SER SER ARG PRO SEQRES 9 A 481 ASP ALA LYS THR LEU ILE PHE TYR ASN HIS TYR ASP THR SEQRES 10 A 481 VAL PRO ALA ASP GLY ASP GLN VAL TRP THR GLU ASP PRO SEQRES 11 A 481 PHE THR LEU SER VAL ARG ASN GLY PHE MET TYR GLY ARG SEQRES 12 A 481 GLY VAL ASP ASP ASP LYS GLY HIS ILE THR ALA ARG LEU SEQRES 13 A 481 SER ALA LEU ARG LYS TYR MET GLN HIS HIS ASP ASP LEU SEQRES 14 A 481 PRO VAL ASN ILE SER PHE ILE MET GLU GLY ALA GLU GLU SEQRES 15 A 481 SER ALA SER THR ASP LEU ASP LYS TYR LEU GLU LYS HIS SEQRES 16 A 481 ALA ASP LYS LEU ARG GLY ALA ASP LEU LEU VAL TRP GLU SEQRES 17 A 481 GLN GLY THR LYS ASN ALA LEU GLU GLN LEU GLU ILE SER SEQRES 18 A 481 GLY GLY ASN LYS GLY ILE VAL THR PHE ASP ALA LYS VAL SEQRES 19 A 481 LYS SER ALA ASP VAL ASP ILE HIS SER SER TYR GLY GLY SEQRES 20 A 481 VAL VAL GLU SER ALA PRO TRP TYR LEU LEU GLN ALA LEU SEQRES 21 A 481 GLN SER LEU ARG ALA ALA ASP GLY ARG ILE LEU VAL GLU SEQRES 22 A 481 GLY LEU TYR GLU GLU VAL GLN GLU PRO ASN GLU ARG GLU SEQRES 23 A 481 MET ALA LEU LEU GLU THR TYR GLY GLN ARG ASN PRO GLU SEQRES 24 A 481 GLU VAL SER ARG ILE TYR GLY LEU GLU LEU PRO LEU LEU SEQRES 25 A 481 GLN GLU GLU ARG MET ALA PHE LEU LYS ARG PHE PHE PHE SEQRES 26 A 481 ASP PRO ALA LEU ASN ILE GLU GLY ILE GLN SER GLY TYR SEQRES 27 A 481 GLN GLY GLN GLY VAL LYS THR ILE LEU PRO ALA GLU ALA SEQRES 28 A 481 SER ALA LYS LEU GLU VAL ARG LEU VAL PRO GLY LEU GLU SEQRES 29 A 481 PRO HIS ASP VAL LEU GLU LYS ILE ARG LYS GLN LEU ASP SEQRES 30 A 481 LYS ASN GLY PHE ASP LYS VAL GLU LEU TYR TYR THR LEU SEQRES 31 A 481 GLY GLU MET SER TYR ARG SER ASP MET SER ALA PRO ALA SEQRES 32 A 481 ILE LEU ASN VAL ILE GLU LEU ALA LYS LYS PHE TYR PRO SEQRES 33 A 481 GLN GLY VAL SER VAL LEU PRO THR THR ALA GLY THR GLY SEQRES 34 A 481 PRO MET HIS THR VAL PHE ASP ALA LEU GLU VAL PRO MET SEQRES 35 A 481 VAL ALA PHE GLY LEU GLY ASN ALA ASN SER ARG ASP HIS SEQRES 36 A 481 GLY GLY ASP GLU ASN VAL ARG ILE ALA ASP TYR TYR THR SEQRES 37 A 481 HIS ILE GLU LEU VAL GLU GLU LEU ILE ARG SER TYR GLU SEQRES 1 B 481 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 B 481 GLY THR GLU ASN LEU TYR PHE GLN SER ASN ALA MET VAL SEQRES 3 B 481 PHE PRO SER GLU GLN GLU GLN ILE GLU LYS PHE GLU LYS SEQRES 4 B 481 ASP HIS VAL ALA GLN HIS TYR PHE GLU VAL LEU ARG THR SEQRES 5 B 481 LEU ILE SER LYS LYS SER VAL PHE ALA GLN GLN VAL GLY SEQRES 6 B 481 LEU LYS GLU VAL ALA ASN TYR LEU GLY GLU ILE PHE LYS SEQRES 7 B 481 ARG VAL GLY ALA GLU VAL GLU ILE ASP GLU SER TYR THR SEQRES 8 B 481 ALA PRO PHE VAL MET ALA HIS PHE LYS SER SER ARG PRO SEQRES 9 B 481 ASP ALA LYS THR LEU ILE PHE TYR ASN HIS TYR ASP THR SEQRES 10 B 481 VAL PRO ALA ASP GLY ASP GLN VAL TRP THR GLU ASP PRO SEQRES 11 B 481 PHE THR LEU SER VAL ARG ASN GLY PHE MET TYR GLY ARG SEQRES 12 B 481 GLY VAL ASP ASP ASP LYS GLY HIS ILE THR ALA ARG LEU SEQRES 13 B 481 SER ALA LEU ARG LYS TYR MET GLN HIS HIS ASP ASP LEU SEQRES 14 B 481 PRO VAL ASN ILE SER PHE ILE MET GLU GLY ALA GLU GLU SEQRES 15 B 481 SER ALA SER THR ASP LEU ASP LYS TYR LEU GLU LYS HIS SEQRES 16 B 481 ALA ASP LYS LEU ARG GLY ALA ASP LEU LEU VAL TRP GLU SEQRES 17 B 481 GLN GLY THR LYS ASN ALA LEU GLU GLN LEU GLU ILE SER SEQRES 18 B 481 GLY GLY ASN LYS GLY ILE VAL THR PHE ASP ALA LYS VAL SEQRES 19 B 481 LYS SER ALA ASP VAL ASP ILE HIS SER SER TYR GLY GLY SEQRES 20 B 481 VAL VAL GLU SER ALA PRO TRP TYR LEU LEU GLN ALA LEU SEQRES 21 B 481 GLN SER LEU ARG ALA ALA ASP GLY ARG ILE LEU VAL GLU SEQRES 22 B 481 GLY LEU TYR GLU GLU VAL GLN GLU PRO ASN GLU ARG GLU SEQRES 23 B 481 MET ALA LEU LEU GLU THR TYR GLY GLN ARG ASN PRO GLU SEQRES 24 B 481 GLU VAL SER ARG ILE TYR GLY LEU GLU LEU PRO LEU LEU SEQRES 25 B 481 GLN GLU GLU ARG MET ALA PHE LEU LYS ARG PHE PHE PHE SEQRES 26 B 481 ASP PRO ALA LEU ASN ILE GLU GLY ILE GLN SER GLY TYR SEQRES 27 B 481 GLN GLY GLN GLY VAL LYS THR ILE LEU PRO ALA GLU ALA SEQRES 28 B 481 SER ALA LYS LEU GLU VAL ARG LEU VAL PRO GLY LEU GLU SEQRES 29 B 481 PRO HIS ASP VAL LEU GLU LYS ILE ARG LYS GLN LEU ASP SEQRES 30 B 481 LYS ASN GLY PHE ASP LYS VAL GLU LEU TYR TYR THR LEU SEQRES 31 B 481 GLY GLU MET SER TYR ARG SER ASP MET SER ALA PRO ALA SEQRES 32 B 481 ILE LEU ASN VAL ILE GLU LEU ALA LYS LYS PHE TYR PRO SEQRES 33 B 481 GLN GLY VAL SER VAL LEU PRO THR THR ALA GLY THR GLY SEQRES 34 B 481 PRO MET HIS THR VAL PHE ASP ALA LEU GLU VAL PRO MET SEQRES 35 B 481 VAL ALA PHE GLY LEU GLY ASN ALA ASN SER ARG ASP HIS SEQRES 36 B 481 GLY GLY ASP GLU ASN VAL ARG ILE ALA ASP TYR TYR THR SEQRES 37 B 481 HIS ILE GLU LEU VAL GLU GLU LEU ILE ARG SER TYR GLU HET BGC A 458 12 HET BGC A 459 12 HET MN A 460 1 HET BGC B 458 12 HET BGC B 459 12 HET MN B 460 1 HETNAM BGC BETA-D-GLUCOPYRANOSE HETNAM MN MANGANESE (II) ION HETSYN BGC BETA-D-GLUCOSE; D-GLUCOSE; GLUCOSE FORMUL 3 BGC 4(C6 H12 O6) FORMUL 5 MN 2(MN 2+) FORMUL 9 HOH *817(H2 O) HELIX 1 1 SER A 5 ASP A 16 1 12 HELIX 2 2 ASP A 16 LYS A 32 1 17 HELIX 3 3 VAL A 35 GLN A 39 5 5 HELIX 4 4 GLY A 41 VAL A 56 1 16 HELIX 5 5 ASP A 124 HIS A 141 1 18 HELIX 6 6 ALA A 156 ALA A 160 5 5 HELIX 7 7 ASP A 163 ARG A 176 1 14 HELIX 8 8 SER A 220 GLY A 222 5 3 HELIX 9 9 SER A 227 LEU A 239 1 13 HELIX 10 10 LEU A 251 VAL A 255 5 5 HELIX 11 11 ASN A 259 GLY A 270 1 12 HELIX 12 12 ASN A 273 GLU A 275 5 3 HELIX 13 13 GLU A 276 GLY A 282 1 7 HELIX 14 14 GLU A 291 ASP A 302 1 12 HELIX 15 15 GLU A 340 ASN A 355 1 16 HELIX 16 16 ALA A 377 LYS A 388 1 12 HELIX 17 17 PRO A 406 GLU A 415 1 10 HELIX 18 18 ILE A 439 SER A 455 1 17 HELIX 19 19 SER B 5 ASP B 16 1 12 HELIX 20 20 ASP B 16 LYS B 32 1 17 HELIX 21 21 GLY B 41 VAL B 56 1 16 HELIX 22 22 ASP B 124 MET B 139 1 16 HELIX 23 23 ALA B 156 ALA B 160 5 5 HELIX 24 24 ASP B 163 ALA B 172 1 10 HELIX 25 25 ASP B 173 LEU B 175 5 3 HELIX 26 26 SER B 220 GLY B 222 5 3 HELIX 27 27 SER B 227 LEU B 239 1 13 HELIX 28 28 LEU B 251 VAL B 255 5 5 HELIX 29 29 ASN B 259 GLY B 270 1 12 HELIX 30 30 PRO B 274 GLY B 282 1 9 HELIX 31 31 GLU B 291 ASP B 302 1 12 HELIX 32 32 GLU B 340 ASN B 355 1 16 HELIX 33 33 ALA B 377 LYS B 388 1 12 HELIX 34 34 PRO B 406 GLU B 415 1 10 HELIX 35 35 ILE B 439 SER B 455 1 17 SHEET 1 A 6 GLU A 59 ASP A 63 0 SHEET 2 A 6 PHE A 70 PHE A 75 -1 O PHE A 70 N ASP A 63 SHEET 3 A 6 ASN A 148 GLU A 154 -1 O ILE A 149 N PHE A 75 SHEET 4 A 6 THR A 84 HIS A 90 1 N LEU A 85 O SER A 150 SHEET 5 A 6 LEU A 180 VAL A 182 1 O VAL A 182 N ILE A 86 SHEET 6 A 6 MET A 418 VAL A 419 1 O VAL A 419 N LEU A 181 SHEET 1 B 3 SER A 110 ARG A 112 0 SHEET 2 B 3 PHE A 115 TYR A 117 -1 O TYR A 117 N SER A 110 SHEET 3 B 3 ASN A 436 ARG A 438 -1 O VAL A 437 N MET A 116 SHEET 1 C 2 LEU A 194 SER A 197 0 SHEET 2 C 2 VAL A 395 LEU A 398 1 O SER A 396 N LEU A 194 SHEET 1 D 8 VAL A 360 GLU A 368 0 SHEET 2 D 8 GLY A 202 LYS A 211 -1 N LYS A 209 O GLU A 361 SHEET 3 D 8 GLU A 326 LEU A 335 -1 O LEU A 331 N PHE A 206 SHEET 4 D 8 ALA A 304 GLY A 313 -1 N GLU A 308 O LYS A 330 SHEET 5 D 8 ALA B 304 GLY B 313 -1 O ILE B 310 N SER A 312 SHEET 6 D 8 GLU B 326 LEU B 335 -1 O LYS B 330 N GLY B 309 SHEET 7 D 8 GLY B 202 LYS B 211 -1 N PHE B 206 O LEU B 331 SHEET 8 D 8 GLU B 361 GLU B 368 -1 O GLU B 361 N LYS B 209 SHEET 1 E 2 ILE A 217 HIS A 218 0 SHEET 2 E 2 ILE A 322 LEU A 323 -1 O LEU A 323 N ILE A 217 SHEET 1 F 6 GLU B 59 ASP B 63 0 SHEET 2 F 6 PHE B 70 PHE B 75 -1 O PHE B 70 N ASP B 63 SHEET 3 F 6 ASN B 148 GLU B 154 -1 O ILE B 149 N PHE B 75 SHEET 4 F 6 THR B 84 HIS B 90 1 N PHE B 87 O ILE B 152 SHEET 5 F 6 LEU B 180 VAL B 182 1 O VAL B 182 N ILE B 86 SHEET 6 F 6 MET B 418 VAL B 419 1 O VAL B 419 N LEU B 181 SHEET 1 G 3 SER B 110 ARG B 112 0 SHEET 2 G 3 PHE B 115 TYR B 117 -1 O TYR B 117 N SER B 110 SHEET 3 G 3 ASN B 436 ARG B 438 -1 O VAL B 437 N MET B 116 SHEET 1 H 2 LEU B 194 SER B 197 0 SHEET 2 H 2 VAL B 395 LEU B 398 1 O SER B 396 N LEU B 194 SHEET 1 I 2 ILE B 217 HIS B 218 0 SHEET 2 I 2 ILE B 322 LEU B 323 -1 O LEU B 323 N ILE B 217 LINK NE2 HIS A 90 MN MN A 460 1555 1555 2.59 LINK OD1 ASP A 123 MN MN A 460 1555 1555 2.28 LINK OE2 GLU A 184 MN MN A 460 1555 1555 2.02 LINK NE2 GLN A 185 MN MN A 460 1555 1555 2.29 LINK MN MN A 460 O HOH A 609 1555 1555 2.35 LINK NE2 HIS B 90 MN MN B 460 1555 1555 2.44 LINK OD1 ASP B 123 MN MN B 460 1555 1555 2.13 LINK OE1 GLU B 184 MN MN B 460 1555 1555 1.88 LINK OE2 GLU B 184 MN MN B 460 1555 1555 2.50 LINK NE2 GLN B 185 MN MN B 460 1555 1555 2.50 LINK MN MN B 460 O HOH B 573 1555 1555 1.97 CISPEP 1 ASP A 123 ASP A 124 0 6.73 CISPEP 2 ASP B 123 ASP B 124 0 4.85 CRYST1 87.954 101.922 118.074 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011370 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009811 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008469 0.00000 CONECT 755 7404 CONECT 1016 7404 CONECT 1516 7404 CONECT 1525 7404 CONECT 4465 7429 CONECT 4726 7429 CONECT 5220 7429 CONECT 5221 7429 CONECT 5230 7429 CONECT 7380 7381 7385 7387 CONECT 7381 7380 7382 7388 CONECT 7382 7381 7383 7389 CONECT 7383 7382 7384 7390 CONECT 7384 7383 7391 CONECT 7385 7380 7386 7390 CONECT 7386 7385 CONECT 7387 7380 CONECT 7388 7381 CONECT 7389 7382 CONECT 7390 7383 7385 CONECT 7391 7384 CONECT 7392 7393 7397 7399 CONECT 7393 7392 7394 7400 CONECT 7394 7393 7395 7401 CONECT 7395 7394 7396 7402 CONECT 7396 7395 7403 CONECT 7397 7392 7398 7402 CONECT 7398 7397 CONECT 7399 7392 CONECT 7400 7393 CONECT 7401 7394 CONECT 7402 7395 7397 CONECT 7403 7396 CONECT 7404 755 1016 1516 1525 CONECT 7404 7580 CONECT 7405 7406 7410 7412 CONECT 7406 7405 7407 7413 CONECT 7407 7406 7408 7414 CONECT 7408 7407 7409 7415 CONECT 7409 7408 7416 CONECT 7410 7405 7411 7415 CONECT 7411 7410 CONECT 7412 7405 CONECT 7413 7406 CONECT 7414 7407 CONECT 7415 7408 7410 CONECT 7416 7409 CONECT 7417 7418 7422 7424 CONECT 7418 7417 7419 7425 CONECT 7419 7418 7420 7426 CONECT 7420 7419 7421 7427 CONECT 7421 7420 7428 CONECT 7422 7417 7423 7427 CONECT 7423 7422 CONECT 7424 7417 CONECT 7425 7418 CONECT 7426 7419 CONECT 7427 7420 7422 CONECT 7428 7421 CONECT 7429 4465 4726 5220 5221 CONECT 7429 5230 7973 CONECT 7580 7404 CONECT 7973 7429 MASTER 369 0 6 35 34 0 0 6 8128 2 63 74 END