HEADER HYDROLASE 26-APR-07 2POK TITLE CRYSTAL STRUCTURE OF A M20 FAMILY METALLO PEPTIDASE FROM STREPTOCOCCUS TITLE 2 PNEUMONIAE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PEPTIDASE, M20/M25/M40 FAMILY; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS PNEUMONIAE; SOURCE 3 ORGANISM_TAXID: 170187; SOURCE 4 STRAIN: TIGR4; SOURCE 5 ATCC: BAA-334; SOURCE 6 GENE: SP_0150; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS M20 FAMILY PEPTIDASE, METALLO PROTEIN, MCSG, STRUCTURAL GENOMICS, KEYWDS 2 PSI-2, PROTEIN STRUCTURE INITIATIVE, MIDWEST CENTER FOR STRUCTURAL KEYWDS 3 GENOMICS, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR G.MINASOV,L.SHUVALOVA,J.S.BRUNZELLE,I.I.VORONTSOV,O.KIRYUKHINA, AUTHOR 2 F.R.COLLART,A.JOACHIMIAK,W.F.ANDERSON,MIDWEST CENTER FOR STRUCTURAL AUTHOR 3 GENOMICS (MCSG) REVDAT 6 21-FEB-24 2POK 1 HETSYN REVDAT 5 29-JUL-20 2POK 1 COMPND REMARK SEQADV HETNAM REVDAT 5 2 1 LINK SITE REVDAT 4 18-OCT-17 2POK 1 REMARK REVDAT 3 13-JUL-11 2POK 1 VERSN REVDAT 2 24-FEB-09 2POK 1 VERSN REVDAT 1 08-MAY-07 2POK 0 JRNL AUTH G.MINASOV,L.SHUVALOVA,J.S.BRUNZELLE,I.I.VORONTSOV, JRNL AUTH 2 O.KIRYUKHINA,F.R.COLLART,A.JOACHIMIAK,W.F.ANDERSON JRNL TITL CRYSTAL STRUCTURE OF A M20 FAMILY METALLO PEPTIDASE FROM JRNL TITL 2 STREPTOCOCCUS PNEUMONIAE. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 79025 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.181 REMARK 3 R VALUE (WORKING SET) : 0.178 REMARK 3 FREE R VALUE : 0.226 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4150 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5618 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.11 REMARK 3 BIN R VALUE (WORKING SET) : 0.2780 REMARK 3 BIN FREE R VALUE SET COUNT : 302 REMARK 3 BIN FREE R VALUE : 0.3270 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7261 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 50 REMARK 3 SOLVENT ATOMS : 817 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.49 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.86000 REMARK 3 B22 (A**2) : -1.66000 REMARK 3 B33 (A**2) : 4.52000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.146 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.142 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.127 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.559 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.965 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.943 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7584 ; 0.014 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 10274 ; 1.555 ; 1.971 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 914 ; 4.784 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 387 ;34.260 ;24.729 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1325 ;12.401 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 44 ;15.662 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1136 ; 0.102 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5788 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 3595 ; 0.220 ; 0.300 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 5256 ; 0.321 ; 0.500 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 1173 ; 0.223 ; 0.700 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 45 ; 0.210 ; 0.300 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 31 ; 0.202 ; 0.700 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 4710 ; 1.289 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 7380 ; 1.940 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3238 ; 3.222 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2894 ; 5.081 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2POK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-MAY-07. REMARK 100 THE DEPOSITION ID IS D_1000042609. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-JUL-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : SI REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 83179 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.06200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.36700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MIRAS REMARK 200 SOFTWARE USED: SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.52 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.44 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M AMMONIUM ACETATE, 0.5M SODIUM REMARK 280 CHLORIDE, 20% W/V PEG 3350, PH 8.3, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 43.97700 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 59.03700 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 50.96100 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 59.03700 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 43.97700 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 50.96100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: CHAINS A AND B FORM THE BIOLOGICAL ASSEMBLY, DIMER. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6390 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 36500 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -52.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -23 REMARK 465 HIS A -22 REMARK 465 HIS A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 SER A -16 REMARK 465 SER A -15 REMARK 465 GLY A -14 REMARK 465 VAL A -13 REMARK 465 ASP A -12 REMARK 465 LEU A -11 REMARK 465 GLY A -10 REMARK 465 THR A -9 REMARK 465 GLU A -8 REMARK 465 ASN A -7 REMARK 465 LEU A -6 REMARK 465 TYR A -5 REMARK 465 PHE A -4 REMARK 465 GLN A -3 REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 MET B -23 REMARK 465 HIS B -22 REMARK 465 HIS B -21 REMARK 465 HIS B -20 REMARK 465 HIS B -19 REMARK 465 HIS B -18 REMARK 465 HIS B -17 REMARK 465 SER B -16 REMARK 465 SER B -15 REMARK 465 GLY B -14 REMARK 465 VAL B -13 REMARK 465 ASP B -12 REMARK 465 LEU B -11 REMARK 465 GLY B -10 REMARK 465 THR B -9 REMARK 465 GLU B -8 REMARK 465 ASN B -7 REMARK 465 LEU B -6 REMARK 465 TYR B -5 REMARK 465 PHE B -4 REMARK 465 GLN B -3 REMARK 465 SER B -2 REMARK 465 ASN B -1 REMARK 465 ALA B 0 REMARK 465 MET B 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 97 N - CA - C ANGL. DEV. = 16.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 39 -1.37 59.34 REMARK 500 ASP A 97 -150.23 45.72 REMARK 500 SER A 159 55.78 -115.26 REMARK 500 LEU A 247 72.31 -100.52 REMARK 500 GLU A 275 -5.54 -54.65 REMARK 500 PRO A 406 20.42 -78.82 REMARK 500 HIS A 431 -0.75 67.27 REMARK 500 ASP B 97 -175.82 88.36 REMARK 500 LEU B 247 76.49 -100.75 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 460 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 90 NE2 REMARK 620 2 ASP A 123 OD1 67.5 REMARK 620 3 GLU A 184 OE2 92.8 126.8 REMARK 620 4 GLN A 185 NE2 139.3 77.8 91.4 REMARK 620 5 HOH A 609 O 97.9 85.2 147.9 99.6 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 460 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 90 NE2 REMARK 620 2 ASP B 123 OD1 73.1 REMARK 620 3 GLU B 184 OE1 85.7 116.2 REMARK 620 4 GLU B 184 OE2 94.7 167.3 58.3 REMARK 620 5 GLN B 185 NE2 166.6 99.3 88.0 92.1 REMARK 620 6 HOH B 573 O 96.9 90.0 153.1 94.7 94.1 REMARK 620 N 1 2 3 4 5 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC80199 RELATED DB: TARGETDB DBREF 2POK A 1 457 UNP Q97T10 Q97T10_STRPN 1 457 DBREF 2POK B 1 457 UNP Q97T10 Q97T10_STRPN 1 457 SEQADV 2POK MET A -23 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK HIS A -22 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK HIS A -21 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK HIS A -20 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK HIS A -19 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK HIS A -18 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK HIS A -17 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK SER A -16 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK SER A -15 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK GLY A -14 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK VAL A -13 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK ASP A -12 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK LEU A -11 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK GLY A -10 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK THR A -9 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK GLU A -8 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK ASN A -7 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK LEU A -6 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK TYR A -5 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK PHE A -4 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK GLN A -3 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK SER A -2 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK ASN A -1 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK ALA A 0 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK MET B -23 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK HIS B -22 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK HIS B -21 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK HIS B -20 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK HIS B -19 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK HIS B -18 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK HIS B -17 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK SER B -16 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK SER B -15 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK GLY B -14 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK VAL B -13 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK ASP B -12 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK LEU B -11 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK GLY B -10 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK THR B -9 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK GLU B -8 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK ASN B -7 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK LEU B -6 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK TYR B -5 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK PHE B -4 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK GLN B -3 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK SER B -2 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK ASN B -1 UNP Q97T10 CLONING ARTIFACT SEQADV 2POK ALA B 0 UNP Q97T10 CLONING ARTIFACT SEQRES 1 A 481 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 481 GLY THR GLU ASN LEU TYR PHE GLN SER ASN ALA MET VAL SEQRES 3 A 481 PHE PRO SER GLU GLN GLU GLN ILE GLU LYS PHE GLU LYS SEQRES 4 A 481 ASP HIS VAL ALA GLN HIS TYR PHE GLU VAL LEU ARG THR SEQRES 5 A 481 LEU ILE SER LYS LYS SER VAL PHE ALA GLN GLN VAL GLY SEQRES 6 A 481 LEU LYS GLU VAL ALA ASN TYR LEU GLY GLU ILE PHE LYS SEQRES 7 A 481 ARG VAL GLY ALA GLU VAL GLU ILE ASP GLU SER TYR THR SEQRES 8 A 481 ALA PRO PHE VAL MET ALA HIS PHE LYS SER SER ARG PRO SEQRES 9 A 481 ASP ALA LYS THR LEU ILE PHE TYR ASN HIS TYR ASP THR SEQRES 10 A 481 VAL PRO ALA ASP GLY ASP GLN VAL TRP THR GLU ASP PRO SEQRES 11 A 481 PHE THR LEU SER VAL ARG ASN GLY PHE MET TYR GLY ARG SEQRES 12 A 481 GLY VAL ASP ASP ASP LYS GLY HIS ILE THR ALA ARG LEU SEQRES 13 A 481 SER ALA LEU ARG LYS TYR MET GLN HIS HIS ASP ASP LEU SEQRES 14 A 481 PRO VAL ASN ILE SER PHE ILE MET GLU GLY ALA GLU GLU SEQRES 15 A 481 SER ALA SER THR ASP LEU ASP LYS TYR LEU GLU LYS HIS SEQRES 16 A 481 ALA ASP LYS LEU ARG GLY ALA ASP LEU LEU VAL TRP GLU SEQRES 17 A 481 GLN GLY THR LYS ASN ALA LEU GLU GLN LEU GLU ILE SER SEQRES 18 A 481 GLY GLY ASN LYS GLY ILE VAL THR PHE ASP ALA LYS VAL SEQRES 19 A 481 LYS SER ALA ASP VAL ASP ILE HIS SER SER TYR GLY GLY SEQRES 20 A 481 VAL VAL GLU SER ALA PRO TRP TYR LEU LEU GLN ALA LEU SEQRES 21 A 481 GLN SER LEU ARG ALA ALA ASP GLY ARG ILE LEU VAL GLU SEQRES 22 A 481 GLY LEU TYR GLU GLU VAL GLN GLU PRO ASN GLU ARG GLU SEQRES 23 A 481 MET ALA LEU LEU GLU THR TYR GLY GLN ARG ASN PRO GLU SEQRES 24 A 481 GLU VAL SER ARG ILE TYR GLY LEU GLU LEU PRO LEU LEU SEQRES 25 A 481 GLN GLU GLU ARG MET ALA PHE LEU LYS ARG PHE PHE PHE SEQRES 26 A 481 ASP PRO ALA LEU ASN ILE GLU GLY ILE GLN SER GLY TYR SEQRES 27 A 481 GLN GLY GLN GLY VAL LYS THR ILE LEU PRO ALA GLU ALA SEQRES 28 A 481 SER ALA LYS LEU GLU VAL ARG LEU VAL PRO GLY LEU GLU SEQRES 29 A 481 PRO HIS ASP VAL LEU GLU LYS ILE ARG LYS GLN LEU ASP SEQRES 30 A 481 LYS ASN GLY PHE ASP LYS VAL GLU LEU TYR TYR THR LEU SEQRES 31 A 481 GLY GLU MET SER TYR ARG SER ASP MET SER ALA PRO ALA SEQRES 32 A 481 ILE LEU ASN VAL ILE GLU LEU ALA LYS LYS PHE TYR PRO SEQRES 33 A 481 GLN GLY VAL SER VAL LEU PRO THR THR ALA GLY THR GLY SEQRES 34 A 481 PRO MET HIS THR VAL PHE ASP ALA LEU GLU VAL PRO MET SEQRES 35 A 481 VAL ALA PHE GLY LEU GLY ASN ALA ASN SER ARG ASP HIS SEQRES 36 A 481 GLY GLY ASP GLU ASN VAL ARG ILE ALA ASP TYR TYR THR SEQRES 37 A 481 HIS ILE GLU LEU VAL GLU GLU LEU ILE ARG SER TYR GLU SEQRES 1 B 481 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 B 481 GLY THR GLU ASN LEU TYR PHE GLN SER ASN ALA MET VAL SEQRES 3 B 481 PHE PRO SER GLU GLN GLU GLN ILE GLU LYS PHE GLU LYS SEQRES 4 B 481 ASP HIS VAL ALA GLN HIS TYR PHE GLU VAL LEU ARG THR SEQRES 5 B 481 LEU ILE SER LYS LYS SER VAL PHE ALA GLN GLN VAL GLY SEQRES 6 B 481 LEU LYS GLU VAL ALA ASN TYR LEU GLY GLU ILE PHE LYS SEQRES 7 B 481 ARG VAL GLY ALA GLU VAL GLU ILE ASP GLU SER TYR THR SEQRES 8 B 481 ALA PRO PHE VAL MET ALA HIS PHE LYS SER SER ARG PRO SEQRES 9 B 481 ASP ALA LYS THR LEU ILE PHE TYR ASN HIS TYR ASP THR SEQRES 10 B 481 VAL PRO ALA ASP GLY ASP GLN VAL TRP THR GLU ASP PRO SEQRES 11 B 481 PHE THR LEU SER VAL ARG ASN GLY PHE MET TYR GLY ARG SEQRES 12 B 481 GLY VAL ASP ASP ASP LYS GLY HIS ILE THR ALA ARG LEU SEQRES 13 B 481 SER ALA LEU ARG LYS TYR MET GLN HIS HIS ASP ASP LEU SEQRES 14 B 481 PRO VAL ASN ILE SER PHE ILE MET GLU GLY ALA GLU GLU SEQRES 15 B 481 SER ALA SER THR ASP LEU ASP LYS TYR LEU GLU LYS HIS SEQRES 16 B 481 ALA ASP LYS LEU ARG GLY ALA ASP LEU LEU VAL TRP GLU SEQRES 17 B 481 GLN GLY THR LYS ASN ALA LEU GLU GLN LEU GLU ILE SER SEQRES 18 B 481 GLY GLY ASN LYS GLY ILE VAL THR PHE ASP ALA LYS VAL SEQRES 19 B 481 LYS SER ALA ASP VAL ASP ILE HIS SER SER TYR GLY GLY SEQRES 20 B 481 VAL VAL GLU SER ALA PRO TRP TYR LEU LEU GLN ALA LEU SEQRES 21 B 481 GLN SER LEU ARG ALA ALA ASP GLY ARG ILE LEU VAL GLU SEQRES 22 B 481 GLY LEU TYR GLU GLU VAL GLN GLU PRO ASN GLU ARG GLU SEQRES 23 B 481 MET ALA LEU LEU GLU THR TYR GLY GLN ARG ASN PRO GLU SEQRES 24 B 481 GLU VAL SER ARG ILE TYR GLY LEU GLU LEU PRO LEU LEU SEQRES 25 B 481 GLN GLU GLU ARG MET ALA PHE LEU LYS ARG PHE PHE PHE SEQRES 26 B 481 ASP PRO ALA LEU ASN ILE GLU GLY ILE GLN SER GLY TYR SEQRES 27 B 481 GLN GLY GLN GLY VAL LYS THR ILE LEU PRO ALA GLU ALA SEQRES 28 B 481 SER ALA LYS LEU GLU VAL ARG LEU VAL PRO GLY LEU GLU SEQRES 29 B 481 PRO HIS ASP VAL LEU GLU LYS ILE ARG LYS GLN LEU ASP SEQRES 30 B 481 LYS ASN GLY PHE ASP LYS VAL GLU LEU TYR TYR THR LEU SEQRES 31 B 481 GLY GLU MET SER TYR ARG SER ASP MET SER ALA PRO ALA SEQRES 32 B 481 ILE LEU ASN VAL ILE GLU LEU ALA LYS LYS PHE TYR PRO SEQRES 33 B 481 GLN GLY VAL SER VAL LEU PRO THR THR ALA GLY THR GLY SEQRES 34 B 481 PRO MET HIS THR VAL PHE ASP ALA LEU GLU VAL PRO MET SEQRES 35 B 481 VAL ALA PHE GLY LEU GLY ASN ALA ASN SER ARG ASP HIS SEQRES 36 B 481 GLY GLY ASP GLU ASN VAL ARG ILE ALA ASP TYR TYR THR SEQRES 37 B 481 HIS ILE GLU LEU VAL GLU GLU LEU ILE ARG SER TYR GLU HET BGC A 458 12 HET BGC A 459 12 HET MN A 460 1 HET BGC B 458 12 HET BGC B 459 12 HET MN B 460 1 HETNAM BGC BETA-D-GLUCOPYRANOSE HETNAM MN MANGANESE (II) ION HETSYN BGC BETA-D-GLUCOSE; D-GLUCOSE; GLUCOSE FORMUL 3 BGC 4(C6 H12 O6) FORMUL 5 MN 2(MN 2+) FORMUL 9 HOH *817(H2 O) HELIX 1 1 SER A 5 ASP A 16 1 12 HELIX 2 2 ASP A 16 LYS A 32 1 17 HELIX 3 3 VAL A 35 GLN A 39 5 5 HELIX 4 4 GLY A 41 VAL A 56 1 16 HELIX 5 5 ASP A 124 HIS A 141 1 18 HELIX 6 6 ALA A 156 ALA A 160 5 5 HELIX 7 7 ASP A 163 ARG A 176 1 14 HELIX 8 8 SER A 220 GLY A 222 5 3 HELIX 9 9 SER A 227 LEU A 239 1 13 HELIX 10 10 LEU A 251 VAL A 255 5 5 HELIX 11 11 ASN A 259 GLY A 270 1 12 HELIX 12 12 ASN A 273 GLU A 275 5 3 HELIX 13 13 GLU A 276 GLY A 282 1 7 HELIX 14 14 GLU A 291 ASP A 302 1 12 HELIX 15 15 GLU A 340 ASN A 355 1 16 HELIX 16 16 ALA A 377 LYS A 388 1 12 HELIX 17 17 PRO A 406 GLU A 415 1 10 HELIX 18 18 ILE A 439 SER A 455 1 17 HELIX 19 19 SER B 5 ASP B 16 1 12 HELIX 20 20 ASP B 16 LYS B 32 1 17 HELIX 21 21 GLY B 41 VAL B 56 1 16 HELIX 22 22 ASP B 124 MET B 139 1 16 HELIX 23 23 ALA B 156 ALA B 160 5 5 HELIX 24 24 ASP B 163 ALA B 172 1 10 HELIX 25 25 ASP B 173 LEU B 175 5 3 HELIX 26 26 SER B 220 GLY B 222 5 3 HELIX 27 27 SER B 227 LEU B 239 1 13 HELIX 28 28 LEU B 251 VAL B 255 5 5 HELIX 29 29 ASN B 259 GLY B 270 1 12 HELIX 30 30 PRO B 274 GLY B 282 1 9 HELIX 31 31 GLU B 291 ASP B 302 1 12 HELIX 32 32 GLU B 340 ASN B 355 1 16 HELIX 33 33 ALA B 377 LYS B 388 1 12 HELIX 34 34 PRO B 406 GLU B 415 1 10 HELIX 35 35 ILE B 439 SER B 455 1 17 SHEET 1 A 6 GLU A 59 ASP A 63 0 SHEET 2 A 6 PHE A 70 PHE A 75 -1 O PHE A 70 N ASP A 63 SHEET 3 A 6 ASN A 148 GLU A 154 -1 O ILE A 149 N PHE A 75 SHEET 4 A 6 THR A 84 HIS A 90 1 N LEU A 85 O SER A 150 SHEET 5 A 6 LEU A 180 VAL A 182 1 O VAL A 182 N ILE A 86 SHEET 6 A 6 MET A 418 VAL A 419 1 O VAL A 419 N LEU A 181 SHEET 1 B 3 SER A 110 ARG A 112 0 SHEET 2 B 3 PHE A 115 TYR A 117 -1 O TYR A 117 N SER A 110 SHEET 3 B 3 ASN A 436 ARG A 438 -1 O VAL A 437 N MET A 116 SHEET 1 C 2 LEU A 194 SER A 197 0 SHEET 2 C 2 VAL A 395 LEU A 398 1 O SER A 396 N LEU A 194 SHEET 1 D 8 VAL A 360 GLU A 368 0 SHEET 2 D 8 GLY A 202 LYS A 211 -1 N LYS A 209 O GLU A 361 SHEET 3 D 8 GLU A 326 LEU A 335 -1 O LEU A 331 N PHE A 206 SHEET 4 D 8 ALA A 304 GLY A 313 -1 N GLU A 308 O LYS A 330 SHEET 5 D 8 ALA B 304 GLY B 313 -1 O ILE B 310 N SER A 312 SHEET 6 D 8 GLU B 326 LEU B 335 -1 O LYS B 330 N GLY B 309 SHEET 7 D 8 GLY B 202 LYS B 211 -1 N PHE B 206 O LEU B 331 SHEET 8 D 8 GLU B 361 GLU B 368 -1 O GLU B 361 N LYS B 209 SHEET 1 E 2 ILE A 217 HIS A 218 0 SHEET 2 E 2 ILE A 322 LEU A 323 -1 O LEU A 323 N ILE A 217 SHEET 1 F 6 GLU B 59 ASP B 63 0 SHEET 2 F 6 PHE B 70 PHE B 75 -1 O PHE B 70 N ASP B 63 SHEET 3 F 6 ASN B 148 GLU B 154 -1 O ILE B 149 N PHE B 75 SHEET 4 F 6 THR B 84 HIS B 90 1 N PHE B 87 O ILE B 152 SHEET 5 F 6 LEU B 180 VAL B 182 1 O VAL B 182 N ILE B 86 SHEET 6 F 6 MET B 418 VAL B 419 1 O VAL B 419 N LEU B 181 SHEET 1 G 3 SER B 110 ARG B 112 0 SHEET 2 G 3 PHE B 115 TYR B 117 -1 O TYR B 117 N SER B 110 SHEET 3 G 3 ASN B 436 ARG B 438 -1 O VAL B 437 N MET B 116 SHEET 1 H 2 LEU B 194 SER B 197 0 SHEET 2 H 2 VAL B 395 LEU B 398 1 O SER B 396 N LEU B 194 SHEET 1 I 2 ILE B 217 HIS B 218 0 SHEET 2 I 2 ILE B 322 LEU B 323 -1 O LEU B 323 N ILE B 217 LINK NE2 HIS A 90 MN MN A 460 1555 1555 2.59 LINK OD1 ASP A 123 MN MN A 460 1555 1555 2.28 LINK OE2 GLU A 184 MN MN A 460 1555 1555 2.02 LINK NE2 GLN A 185 MN MN A 460 1555 1555 2.29 LINK MN MN A 460 O HOH A 609 1555 1555 2.35 LINK NE2 HIS B 90 MN MN B 460 1555 1555 2.44 LINK OD1 ASP B 123 MN MN B 460 1555 1555 2.13 LINK OE1 GLU B 184 MN MN B 460 1555 1555 1.88 LINK OE2 GLU B 184 MN MN B 460 1555 1555 2.50 LINK NE2 GLN B 185 MN MN B 460 1555 1555 2.50 LINK MN MN B 460 O HOH B 573 1555 1555 1.97 CISPEP 1 ASP A 123 ASP A 124 0 6.73 CISPEP 2 ASP B 123 ASP B 124 0 4.85 CRYST1 87.954 101.922 118.074 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011370 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009811 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008469 0.00000