data_2PQ7 # _entry.id 2PQ7 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2PQ7 pdb_00002pq7 10.2210/pdb2pq7/pdb RCSB RCSB042664 ? ? WWPDB D_1000042664 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 371986 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 2PQ7 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2007-05-01 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of predicted HD superfamily hydrolase (104161995) from uncultured Thermotogales bacterium at 1.45 A resolution' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 2PQ7 _cell.length_a 138.518 _cell.length_b 40.662 _cell.length_c 37.789 _cell.angle_alpha 90.000 _cell.angle_beta 95.320 _cell.angle_gamma 90.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 4 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2PQ7 _symmetry.Int_Tables_number 5 _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Predicted HD superfamily hydrolase' 24962.469 1 ? ? ? ? 2 non-polymer syn 'FE (III) ION' 55.845 2 ? ? ? ? 3 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 4 non-polymer syn 'PHOSPHATE ION' 94.971 2 ? ? ? ? 5 non-polymer syn '(4S)-2-METHYL-2,4-PENTANEDIOL' 118.174 1 ? ? ? ? 6 water nat water 18.015 148 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;G(MSE)NLTEL(MSE)ERIPHLREILNIVREAFKDYDDPAHDISHTFRV(MSE)ENASEIASREKCDLQKAIIAALLHDI KRPHEALTGVDHAESGAEYASGLLPT(MSE)GFDISFVAEVSKAIRSHRYSGGLTPTSLTGKILQDADRLDAIGAVAIAR VFSYSGKTGTPLHSLQFSPRSSYSGNSRSSINHFHEKILKIRPETFWTETARK(MSE)AEDRYSFVVEFVQRFLAEWGQI ; _entity_poly.pdbx_seq_one_letter_code_can ;GMNLTELMERIPHLREILNIVREAFKDYDDPAHDISHTFRVMENASEIASREKCDLQKAIIAALLHDIKRPHEALTGVDH AESGAEYASGLLPTMGFDISFVAEVSKAIRSHRYSGGLTPTSLTGKILQDADRLDAIGAVAIARVFSYSGKTGTPLHSLQ FSPRSSYSGNSRSSINHFHEKILKIRPETFWTETARKMAEDRYSFVVEFVQRFLAEWGQI ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier 371986 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 MSE n 1 3 ASN n 1 4 LEU n 1 5 THR n 1 6 GLU n 1 7 LEU n 1 8 MSE n 1 9 GLU n 1 10 ARG n 1 11 ILE n 1 12 PRO n 1 13 HIS n 1 14 LEU n 1 15 ARG n 1 16 GLU n 1 17 ILE n 1 18 LEU n 1 19 ASN n 1 20 ILE n 1 21 VAL n 1 22 ARG n 1 23 GLU n 1 24 ALA n 1 25 PHE n 1 26 LYS n 1 27 ASP n 1 28 TYR n 1 29 ASP n 1 30 ASP n 1 31 PRO n 1 32 ALA n 1 33 HIS n 1 34 ASP n 1 35 ILE n 1 36 SER n 1 37 HIS n 1 38 THR n 1 39 PHE n 1 40 ARG n 1 41 VAL n 1 42 MSE n 1 43 GLU n 1 44 ASN n 1 45 ALA n 1 46 SER n 1 47 GLU n 1 48 ILE n 1 49 ALA n 1 50 SER n 1 51 ARG n 1 52 GLU n 1 53 LYS n 1 54 CYS n 1 55 ASP n 1 56 LEU n 1 57 GLN n 1 58 LYS n 1 59 ALA n 1 60 ILE n 1 61 ILE n 1 62 ALA n 1 63 ALA n 1 64 LEU n 1 65 LEU n 1 66 HIS n 1 67 ASP n 1 68 ILE n 1 69 LYS n 1 70 ARG n 1 71 PRO n 1 72 HIS n 1 73 GLU n 1 74 ALA n 1 75 LEU n 1 76 THR n 1 77 GLY n 1 78 VAL n 1 79 ASP n 1 80 HIS n 1 81 ALA n 1 82 GLU n 1 83 SER n 1 84 GLY n 1 85 ALA n 1 86 GLU n 1 87 TYR n 1 88 ALA n 1 89 SER n 1 90 GLY n 1 91 LEU n 1 92 LEU n 1 93 PRO n 1 94 THR n 1 95 MSE n 1 96 GLY n 1 97 PHE n 1 98 ASP n 1 99 ILE n 1 100 SER n 1 101 PHE n 1 102 VAL n 1 103 ALA n 1 104 GLU n 1 105 VAL n 1 106 SER n 1 107 LYS n 1 108 ALA n 1 109 ILE n 1 110 ARG n 1 111 SER n 1 112 HIS n 1 113 ARG n 1 114 TYR n 1 115 SER n 1 116 GLY n 1 117 GLY n 1 118 LEU n 1 119 THR n 1 120 PRO n 1 121 THR n 1 122 SER n 1 123 LEU n 1 124 THR n 1 125 GLY n 1 126 LYS n 1 127 ILE n 1 128 LEU n 1 129 GLN n 1 130 ASP n 1 131 ALA n 1 132 ASP n 1 133 ARG n 1 134 LEU n 1 135 ASP n 1 136 ALA n 1 137 ILE n 1 138 GLY n 1 139 ALA n 1 140 VAL n 1 141 ALA n 1 142 ILE n 1 143 ALA n 1 144 ARG n 1 145 VAL n 1 146 PHE n 1 147 SER n 1 148 TYR n 1 149 SER n 1 150 GLY n 1 151 LYS n 1 152 THR n 1 153 GLY n 1 154 THR n 1 155 PRO n 1 156 LEU n 1 157 HIS n 1 158 SER n 1 159 LEU n 1 160 GLN n 1 161 PHE n 1 162 SER n 1 163 PRO n 1 164 ARG n 1 165 SER n 1 166 SER n 1 167 TYR n 1 168 SER n 1 169 GLY n 1 170 ASN n 1 171 SER n 1 172 ARG n 1 173 SER n 1 174 SER n 1 175 ILE n 1 176 ASN n 1 177 HIS n 1 178 PHE n 1 179 HIS n 1 180 GLU n 1 181 LYS n 1 182 ILE n 1 183 LEU n 1 184 LYS n 1 185 ILE n 1 186 ARG n 1 187 PRO n 1 188 GLU n 1 189 THR n 1 190 PHE n 1 191 TRP n 1 192 THR n 1 193 GLU n 1 194 THR n 1 195 ALA n 1 196 ARG n 1 197 LYS n 1 198 MSE n 1 199 ALA n 1 200 GLU n 1 201 ASP n 1 202 ARG n 1 203 TYR n 1 204 SER n 1 205 PHE n 1 206 VAL n 1 207 VAL n 1 208 GLU n 1 209 PHE n 1 210 VAL n 1 211 GLN n 1 212 ARG n 1 213 PHE n 1 214 LEU n 1 215 ALA n 1 216 GLU n 1 217 TRP n 1 218 GLY n 1 219 GLN n 1 220 ILE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene '104161995, mes0020' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'uncultured Thermotogales bacterium' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 221214 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain HK100 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name speedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q1EM40_9BACT _struct_ref.pdbx_db_accession Q1EM40 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MNLTELMERIPHLREILNIVREAFKDYDDPAHDISHTFRVMENASEIASREKCDLQKAIIAALLHDIKRPHEALTGVDHA ESGAEYASGLLPTMGFDISFVAEVSKAIRSHRYSGGLTPTSLTGKILQDADRLDAIGAVAIARVFSYSGKTGTPLHSLQF SPRSSYSGNSRSSINHFHEKILKIRPETFWTETARKMAEDRYSFVVEFVQRFLAEWGQI ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2PQ7 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 220 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q1EM40 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 219 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 219 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2PQ7 GLY A 1 ? UNP Q1EM40 ? ? 'expression tag' 0 1 1 2PQ7 MSE A 2 ? UNP Q1EM40 MET 1 'modified residue' 1 2 1 2PQ7 MSE A 8 ? UNP Q1EM40 MET 7 'modified residue' 7 3 1 2PQ7 MSE A 42 ? UNP Q1EM40 MET 41 'modified residue' 41 4 1 2PQ7 MSE A 95 ? UNP Q1EM40 MET 94 'modified residue' 94 5 1 2PQ7 MSE A 198 ? UNP Q1EM40 MET 197 'modified residue' 197 6 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 FE non-polymer . 'FE (III) ION' ? 'Fe 3' 55.845 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MPD non-polymer . '(4S)-2-METHYL-2,4-PENTANEDIOL' ? 'C6 H14 O2' 118.174 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PO4 non-polymer . 'PHOSPHATE ION' ? 'O4 P -3' 94.971 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 2PQ7 # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.12 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 42.03 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 5.0 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details ;NANODROP, 24.0% 2-methyl-2,4-pentanediol, 0.2M Sodium chloride, 0.1M Sodium acetate pH 5.0, VAPOR DIFFUSION, SITTING DROP, temperature 277K ; _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.details 'Flat mirror (vertical focusing)' _diffrn_detector.pdbx_collection_date 2007-04-14 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Single crystal Si(111) bent (horizontal focusing)' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.91837 1.0 2 0.97916 1.0 3 0.97867 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL11-1 _diffrn_source.type 'SSRL BEAMLINE BL11-1' _diffrn_source.pdbx_wavelength_list '0.91837, 0.97916, 0.97867' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.entry_id 2PQ7 _reflns.d_resolution_high 1.45 _reflns.d_resolution_low 27.441 _reflns.number_obs 37299 _reflns.pdbx_Rmerge_I_obs 0.065 _reflns.pdbx_netI_over_sigmaI 7.200 _reflns.pdbx_Rsym_value 0.065 _reflns.pdbx_redundancy 3.700 _reflns.percent_possible_obs 99.900 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.B_iso_Wilson_estimate 17.32 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal 1.45 1.49 ? 9837 ? 0.701 1.1 0.701 ? 3.70 ? 2695 99.80 ? 1 1.49 1.53 ? 9745 ? 0.575 1.3 0.575 ? 3.70 ? 2661 99.80 ? 2 1.53 1.57 ? 9672 ? 0.439 1.7 0.439 ? 3.70 ? 2637 99.70 ? 3 1.57 1.62 ? 9258 ? 0.351 2.2 0.351 ? 3.70 ? 2525 100.00 ? 4 1.62 1.67 ? 8963 ? 0.295 2.5 0.295 ? 3.70 ? 2434 99.90 ? 5 1.67 1.73 ? 8782 ? 0.242 3.1 0.242 ? 3.70 ? 2381 100.00 ? 6 1.73 1.80 ? 8527 ? 0.196 3.8 0.196 ? 3.70 ? 2297 100.00 ? 7 1.80 1.87 ? 8169 ? 0.164 4.6 0.164 ? 3.70 ? 2197 100.00 ? 8 1.87 1.96 ? 7906 ? 0.129 5.8 0.129 ? 3.70 ? 2129 100.00 ? 9 1.96 2.05 ? 7528 ? 0.107 6.8 0.107 ? 3.70 ? 2027 100.00 ? 10 2.05 2.16 ? 7139 ? 0.076 9.3 0.076 ? 3.70 ? 1909 100.00 ? 11 2.16 2.29 ? 6790 ? 0.069 9.9 0.069 ? 3.70 ? 1823 100.00 ? 12 2.29 2.45 ? 6417 ? 0.065 10.2 0.065 ? 3.70 ? 1721 100.00 ? 13 2.45 2.65 ? 6034 ? 0.055 11.8 0.055 ? 3.70 ? 1622 100.00 ? 14 2.65 2.90 ? 5575 ? 0.049 13.3 0.049 ? 3.70 ? 1493 100.00 ? 15 2.90 3.24 ? 4923 ? 0.046 13.3 0.046 ? 3.70 ? 1321 100.00 ? 16 3.24 3.74 ? 4469 ? 0.046 12.7 0.046 ? 3.70 ? 1205 100.00 ? 17 3.74 4.59 ? 3685 ? 0.037 17.7 0.037 ? 3.70 ? 1005 100.00 ? 18 4.59 6.48 ? 2833 ? 0.038 16.5 0.038 ? 3.60 ? 793 99.90 ? 19 6.48 27.44 ? 1356 ? 0.045 13.4 0.045 ? 3.20 ? 424 93.90 ? 20 # _refine.entry_id 2PQ7 _refine.ls_d_res_high 1.450 _refine.ls_d_res_low 27.441 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 99.850 _refine.ls_number_reflns_obs 37299 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2. ATOM RECORD CONTAINS RESIDUAL B FACTORS ONLY. 3. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 TO ACCOUNT FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 4. TWO IRON IONS, ONE CHLORIDE ION, TWO PHOSPHATE IONS AND ONE 2-METHYL-2,4-PENTANEDIOL WERE MODELED. THE PRESENCE OF THE TWO IRON ATOMS IS SUPPORTED BY X-RAY FLUORESCENCE MEASUREMENTS, ANOMALOUS DIFFERENCE FOURIERS AND GEOMETRY. 5. RESIDUES 113 TO 117, 148 TO 185 ARE DISORDERED AND NOT MODELED IN THE STRUCTURE. ; _refine.ls_R_factor_all 0.183 _refine.ls_R_factor_R_work 0.183 _refine.ls_R_factor_R_free 0.193 _refine.ls_percent_reflns_R_free 5.000 _refine.ls_number_reflns_R_free 1864 _refine.B_iso_mean 20.351 _refine.aniso_B[1][1] 0.260 _refine.aniso_B[2][2] -1.130 _refine.aniso_B[3][3] 0.690 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] -0.960 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.967 _refine.correlation_coeff_Fo_to_Fc_free 0.961 _refine.pdbx_overall_ESU_R 0.064 _refine.pdbx_overall_ESU_R_Free 0.061 _refine.overall_SU_ML 0.052 _refine.overall_SU_B 1.373 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_obs 0.183 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1444 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 13 _refine_hist.number_atoms_solvent 156 _refine_hist.number_atoms_total 1613 _refine_hist.d_res_high 1.450 _refine_hist.d_res_low 27.441 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 1496 0.018 0.022 ? 'X-RAY DIFFRACTION' ? r_bond_other_d 1381 0.002 0.020 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2038 1.561 1.953 ? 'X-RAY DIFFRACTION' ? r_angle_other_deg 3191 0.986 3.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 197 3.536 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 60 23.742 23.167 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 254 12.714 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 10 12.265 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 231 0.103 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1692 0.007 0.020 ? 'X-RAY DIFFRACTION' ? r_gen_planes_other 312 0.002 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 411 0.218 0.300 ? 'X-RAY DIFFRACTION' ? r_nbd_other 1404 0.156 0.300 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 789 0.183 0.500 ? 'X-RAY DIFFRACTION' ? r_nbtor_other 858 0.089 0.500 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 197 0.178 0.500 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 8 0.221 0.300 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 49 0.206 0.300 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 29 0.186 0.500 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 983 2.218 3.000 ? 'X-RAY DIFFRACTION' ? r_mcbond_other 382 0.524 3.000 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1536 3.003 5.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 584 5.641 8.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 501 7.859 11.000 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.450 _refine_ls_shell.d_res_low 1.488 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 99.810 _refine_ls_shell.number_reflns_R_work 2554 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.297 _refine_ls_shell.R_factor_R_free 0.340 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 142 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs 2696 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2PQ7 _struct.title 'Crystal structure of predicted HD superfamily hydrolase (104161995) from uncultured Thermotogales bacterium at 1.45 A resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text ;104161995, HD domain, predicted HD superfamily hydrolase, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2, HYDROLASE ; _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.entry_id 2PQ7 # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 4 ? G N N 5 ? H N N 6 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 3 ? ILE A 11 ? ASN A 2 ILE A 10 1 ? 9 HELX_P HELX_P2 2 HIS A 13 ? LYS A 26 ? HIS A 12 LYS A 25 1 ? 14 HELX_P HELX_P3 3 ASP A 34 ? LYS A 53 ? ASP A 33 LYS A 52 1 ? 20 HELX_P HELX_P4 4 ASP A 55 ? HIS A 66 ? ASP A 54 HIS A 65 1 ? 12 HELX_P HELX_P5 5 LYS A 69 ? GLY A 77 ? LYS A 68 GLY A 76 1 ? 9 HELX_P HELX_P6 6 ASP A 79 ? LEU A 92 ? ASP A 78 LEU A 91 1 ? 14 HELX_P HELX_P7 7 PRO A 93 ? GLY A 96 ? PRO A 92 GLY A 95 5 ? 4 HELX_P HELX_P8 8 ASP A 98 ? HIS A 112 ? ASP A 97 HIS A 111 1 ? 15 HELX_P HELX_P9 9 SER A 122 ? LEU A 134 ? SER A 121 LEU A 133 1 ? 13 HELX_P HELX_P10 10 ASP A 135 ? ILE A 137 ? ASP A 134 ILE A 136 5 ? 3 HELX_P HELX_P11 11 GLY A 138 ? TYR A 148 ? GLY A 137 TYR A 147 1 ? 11 HELX_P HELX_P12 12 THR A 192 ? GLY A 218 ? THR A 191 GLY A 217 1 ? 27 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A MSE 2 C A ? ? 1_555 A ASN 3 N ? ? A MSE 1 A ASN 2 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale2 covale both ? A MSE 2 C B ? ? 1_555 A ASN 3 N ? ? A MSE 1 A ASN 2 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale3 covale both ? A LEU 7 C ? ? ? 1_555 A MSE 8 N A ? A LEU 6 A MSE 7 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale4 covale both ? A LEU 7 C ? ? ? 1_555 A MSE 8 N B ? A LEU 6 A MSE 7 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale5 covale both ? A MSE 8 C A ? ? 1_555 A GLU 9 N ? ? A MSE 7 A GLU 8 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale6 covale both ? A MSE 8 C B ? ? 1_555 A GLU 9 N ? ? A MSE 7 A GLU 8 1_555 ? ? ? ? ? ? ? 1.322 ? ? covale7 covale both ? A VAL 41 C ? ? ? 1_555 A MSE 42 N A ? A VAL 40 A MSE 41 1_555 ? ? ? ? ? ? ? 1.321 ? ? covale8 covale both ? A VAL 41 C ? ? ? 1_555 A MSE 42 N B ? A VAL 40 A MSE 41 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale9 covale both ? A MSE 42 C A ? ? 1_555 A GLU 43 N ? ? A MSE 41 A GLU 42 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale10 covale both ? A MSE 42 C B ? ? 1_555 A GLU 43 N ? ? A MSE 41 A GLU 42 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale11 covale both ? A THR 94 C ? ? ? 1_555 A MSE 95 N ? ? A THR 93 A MSE 94 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale12 covale both ? A MSE 95 C ? ? ? 1_555 A GLY 96 N ? ? A MSE 94 A GLY 95 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale13 covale both ? A LYS 197 C ? ? ? 1_555 A MSE 198 N A ? A LYS 196 A MSE 197 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale14 covale both ? A LYS 197 C ? ? ? 1_555 A MSE 198 N B ? A LYS 196 A MSE 197 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale15 covale both ? A MSE 198 C B ? ? 1_555 A ALA 199 N ? ? A MSE 197 A ALA 198 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale16 covale both ? A MSE 198 C A ? ? 1_555 A ALA 199 N ? ? A MSE 197 A ALA 198 1_555 ? ? ? ? ? ? ? 1.334 ? ? metalc1 metalc ? ? A HIS 37 NE2 ? ? ? 1_555 C FE . FE ? ? A HIS 36 A FE 221 1_555 ? ? ? ? ? ? ? 2.157 ? ? metalc2 metalc ? ? A HIS 66 NE2 ? ? ? 1_555 C FE . FE ? ? A HIS 65 A FE 221 1_555 ? ? ? ? ? ? ? 2.231 ? ? metalc3 metalc ? ? A ASP 67 OD1 ? ? ? 1_555 B FE . FE ? ? A ASP 66 A FE 220 1_555 ? ? ? ? ? ? ? 2.002 ? ? metalc4 metalc ? ? A ASP 67 OD2 ? ? ? 1_555 C FE . FE ? ? A ASP 66 A FE 221 1_555 ? ? ? ? ? ? ? 2.109 ? ? metalc5 metalc ? ? A HIS 80 NE2 ? ? ? 1_555 B FE . FE ? ? A HIS 79 A FE 220 1_555 ? ? ? ? ? ? ? 2.219 ? ? metalc6 metalc ? ? A HIS 112 NE2 ? ? ? 1_555 B FE . FE ? ? A HIS 111 A FE 220 1_555 ? ? ? ? ? ? ? 2.209 ? ? metalc7 metalc ? ? A ASP 132 OD1 ? ? ? 1_555 C FE . FE ? ? A ASP 131 A FE 221 1_555 ? ? ? ? ? ? ? 2.128 ? ? metalc8 metalc ? ? B FE . FE ? ? ? 1_555 E PO4 . O3 ? ? A FE 220 A PO4 223 1_555 ? ? ? ? ? ? ? 2.056 ? ? metalc9 metalc ? ? B FE . FE ? ? ? 1_555 F PO4 . O3 ? ? A FE 220 A PO4 224 1_555 ? ? ? ? ? ? ? 2.069 ? ? metalc10 metalc ? ? B FE . FE ? ? ? 1_555 H HOH . O ? ? A FE 220 A HOH 236 1_555 ? ? ? ? ? ? ? 2.000 ? ? metalc11 metalc ? ? C FE . FE ? ? ? 1_555 E PO4 . O4 ? ? A FE 221 A PO4 223 1_555 ? ? ? ? ? ? ? 2.234 ? ? metalc12 metalc ? ? C FE . FE ? ? ? 1_555 H HOH . O ? ? A FE 221 A HOH 236 1_555 ? ? ? ? ? ? ? 2.074 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A FE 220 ? 7 'BINDING SITE FOR RESIDUE FE A 220' AC2 Software A FE 221 ? 7 'BINDING SITE FOR RESIDUE FE A 221' AC3 Software A CL 222 ? 4 'BINDING SITE FOR RESIDUE CL A 222' AC4 Software A PO4 223 ? 12 'BINDING SITE FOR RESIDUE PO4 A 223' AC5 Software A PO4 224 ? 9 'BINDING SITE FOR RESIDUE PO4 A 224' AC6 Software A MPD 225 ? 5 'BINDING SITE FOR RESIDUE MPD A 225' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 7 ASP A 67 ? ASP A 66 . ? 1_555 ? 2 AC1 7 HIS A 80 ? HIS A 79 . ? 1_555 ? 3 AC1 7 HIS A 112 ? HIS A 111 . ? 1_555 ? 4 AC1 7 FE C . ? FE A 221 . ? 1_555 ? 5 AC1 7 PO4 E . ? PO4 A 223 . ? 1_555 ? 6 AC1 7 PO4 F . ? PO4 A 224 . ? 1_555 ? 7 AC1 7 HOH H . ? HOH A 236 . ? 1_555 ? 8 AC2 7 HIS A 37 ? HIS A 36 . ? 1_555 ? 9 AC2 7 HIS A 66 ? HIS A 65 . ? 1_555 ? 10 AC2 7 ASP A 67 ? ASP A 66 . ? 1_555 ? 11 AC2 7 ASP A 132 ? ASP A 131 . ? 1_555 ? 12 AC2 7 FE B . ? FE A 220 . ? 1_555 ? 13 AC2 7 PO4 E . ? PO4 A 223 . ? 1_555 ? 14 AC2 7 HOH H . ? HOH A 236 . ? 1_555 ? 15 AC3 4 SER A 111 ? SER A 110 . ? 1_555 ? 16 AC3 4 PRO A 120 ? PRO A 119 . ? 1_555 ? 17 AC3 4 THR A 121 ? THR A 120 . ? 1_555 ? 18 AC3 4 SER A 122 ? SER A 121 . ? 1_555 ? 19 AC4 12 HIS A 33 ? HIS A 32 . ? 1_555 ? 20 AC4 12 HIS A 37 ? HIS A 36 . ? 1_555 ? 21 AC4 12 ASP A 67 ? ASP A 66 . ? 1_555 ? 22 AC4 12 ARG A 70 ? ARG A 69 . ? 1_555 ? 23 AC4 12 HIS A 80 ? HIS A 79 . ? 1_555 ? 24 AC4 12 ASP A 132 ? ASP A 131 . ? 1_555 ? 25 AC4 12 FE B . ? FE A 220 . ? 1_555 ? 26 AC4 12 FE C . ? FE A 221 . ? 1_555 ? 27 AC4 12 PO4 F . ? PO4 A 224 . ? 1_555 ? 28 AC4 12 HOH H . ? HOH A 236 . ? 1_555 ? 29 AC4 12 HOH H . ? HOH A 258 . ? 1_555 ? 30 AC4 12 HOH H . ? HOH A 354 . ? 1_555 ? 31 AC5 9 ARG A 70 ? ARG A 69 . ? 1_555 ? 32 AC5 9 HIS A 80 ? HIS A 79 . ? 1_555 ? 33 AC5 9 HIS A 112 ? HIS A 111 . ? 1_555 ? 34 AC5 9 ARG A 113 ? ARG A 112 . ? 1_555 ? 35 AC5 9 ASP A 132 ? ASP A 131 . ? 1_555 ? 36 AC5 9 FE B . ? FE A 220 . ? 1_555 ? 37 AC5 9 PO4 E . ? PO4 A 223 . ? 1_555 ? 38 AC5 9 HOH H . ? HOH A 236 . ? 1_555 ? 39 AC5 9 HOH H . ? HOH A 354 . ? 1_555 ? 40 AC6 5 GLU A 9 ? GLU A 8 . ? 1_555 ? 41 AC6 5 TYR A 87 ? TYR A 86 . ? 4_556 ? 42 AC6 5 HOH H . ? HOH A 266 . ? 4_556 ? 43 AC6 5 HOH H . ? HOH A 312 . ? 4_556 ? 44 AC6 5 HOH H . ? HOH A 353 . ? 1_555 ? # _atom_sites.entry_id 2PQ7 _atom_sites.fract_transf_matrix[1][1] 0.00722 _atom_sites.fract_transf_matrix[1][2] 0.00000 _atom_sites.fract_transf_matrix[1][3] 0.00067 _atom_sites.fract_transf_matrix[2][1] 0.00000 _atom_sites.fract_transf_matrix[2][2] 0.02459 _atom_sites.fract_transf_matrix[2][3] 0.00000 _atom_sites.fract_transf_matrix[3][1] 0.00000 _atom_sites.fract_transf_matrix[3][2] 0.00000 _atom_sites.fract_transf_matrix[3][3] 0.02658 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL FE N O P S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 MSE 2 1 1 MSE MSE A . n A 1 3 ASN 3 2 2 ASN ASN A . n A 1 4 LEU 4 3 3 LEU LEU A . n A 1 5 THR 5 4 4 THR THR A . n A 1 6 GLU 6 5 5 GLU GLU A . n A 1 7 LEU 7 6 6 LEU LEU A . n A 1 8 MSE 8 7 7 MSE MSE A . n A 1 9 GLU 9 8 8 GLU GLU A . n A 1 10 ARG 10 9 9 ARG ARG A . n A 1 11 ILE 11 10 10 ILE ILE A . n A 1 12 PRO 12 11 11 PRO PRO A . n A 1 13 HIS 13 12 12 HIS HIS A . n A 1 14 LEU 14 13 13 LEU LEU A . n A 1 15 ARG 15 14 14 ARG ARG A . n A 1 16 GLU 16 15 15 GLU GLU A . n A 1 17 ILE 17 16 16 ILE ILE A . n A 1 18 LEU 18 17 17 LEU LEU A . n A 1 19 ASN 19 18 18 ASN ASN A . n A 1 20 ILE 20 19 19 ILE ILE A . n A 1 21 VAL 21 20 20 VAL VAL A . n A 1 22 ARG 22 21 21 ARG ARG A . n A 1 23 GLU 23 22 22 GLU GLU A . n A 1 24 ALA 24 23 23 ALA ALA A . n A 1 25 PHE 25 24 24 PHE PHE A . n A 1 26 LYS 26 25 25 LYS LYS A . n A 1 27 ASP 27 26 26 ASP ASP A . n A 1 28 TYR 28 27 27 TYR TYR A . n A 1 29 ASP 29 28 28 ASP ASP A . n A 1 30 ASP 30 29 29 ASP ASP A . n A 1 31 PRO 31 30 30 PRO PRO A . n A 1 32 ALA 32 31 31 ALA ALA A . n A 1 33 HIS 33 32 32 HIS HIS A . n A 1 34 ASP 34 33 33 ASP ASP A . n A 1 35 ILE 35 34 34 ILE ILE A . n A 1 36 SER 36 35 35 SER SER A . n A 1 37 HIS 37 36 36 HIS HIS A . n A 1 38 THR 38 37 37 THR THR A . n A 1 39 PHE 39 38 38 PHE PHE A . n A 1 40 ARG 40 39 39 ARG ARG A . n A 1 41 VAL 41 40 40 VAL VAL A . n A 1 42 MSE 42 41 41 MSE MSE A . n A 1 43 GLU 43 42 42 GLU GLU A . n A 1 44 ASN 44 43 43 ASN ASN A . n A 1 45 ALA 45 44 44 ALA ALA A . n A 1 46 SER 46 45 45 SER SER A . n A 1 47 GLU 47 46 46 GLU GLU A . n A 1 48 ILE 48 47 47 ILE ILE A . n A 1 49 ALA 49 48 48 ALA ALA A . n A 1 50 SER 50 49 49 SER SER A . n A 1 51 ARG 51 50 50 ARG ARG A . n A 1 52 GLU 52 51 51 GLU GLU A . n A 1 53 LYS 53 52 52 LYS LYS A . n A 1 54 CYS 54 53 53 CYS CYS A . n A 1 55 ASP 55 54 54 ASP ASP A . n A 1 56 LEU 56 55 55 LEU LEU A . n A 1 57 GLN 57 56 56 GLN GLN A . n A 1 58 LYS 58 57 57 LYS LYS A . n A 1 59 ALA 59 58 58 ALA ALA A . n A 1 60 ILE 60 59 59 ILE ILE A . n A 1 61 ILE 61 60 60 ILE ILE A . n A 1 62 ALA 62 61 61 ALA ALA A . n A 1 63 ALA 63 62 62 ALA ALA A . n A 1 64 LEU 64 63 63 LEU LEU A . n A 1 65 LEU 65 64 64 LEU LEU A . n A 1 66 HIS 66 65 65 HIS HIS A . n A 1 67 ASP 67 66 66 ASP ASP A . n A 1 68 ILE 68 67 67 ILE ILE A . n A 1 69 LYS 69 68 68 LYS LYS A . n A 1 70 ARG 70 69 69 ARG ARG A . n A 1 71 PRO 71 70 70 PRO PRO A . n A 1 72 HIS 72 71 71 HIS HIS A . n A 1 73 GLU 73 72 72 GLU GLU A . n A 1 74 ALA 74 73 73 ALA ALA A . n A 1 75 LEU 75 74 74 LEU LEU A . n A 1 76 THR 76 75 75 THR THR A . n A 1 77 GLY 77 76 76 GLY GLY A . n A 1 78 VAL 78 77 77 VAL VAL A . n A 1 79 ASP 79 78 78 ASP ASP A . n A 1 80 HIS 80 79 79 HIS HIS A . n A 1 81 ALA 81 80 80 ALA ALA A . n A 1 82 GLU 82 81 81 GLU GLU A . n A 1 83 SER 83 82 82 SER SER A . n A 1 84 GLY 84 83 83 GLY GLY A . n A 1 85 ALA 85 84 84 ALA ALA A . n A 1 86 GLU 86 85 85 GLU GLU A . n A 1 87 TYR 87 86 86 TYR TYR A . n A 1 88 ALA 88 87 87 ALA ALA A . n A 1 89 SER 89 88 88 SER SER A . n A 1 90 GLY 90 89 89 GLY GLY A . n A 1 91 LEU 91 90 90 LEU LEU A . n A 1 92 LEU 92 91 91 LEU LEU A . n A 1 93 PRO 93 92 92 PRO PRO A . n A 1 94 THR 94 93 93 THR THR A . n A 1 95 MSE 95 94 94 MSE MSE A . n A 1 96 GLY 96 95 95 GLY GLY A . n A 1 97 PHE 97 96 96 PHE PHE A . n A 1 98 ASP 98 97 97 ASP ASP A . n A 1 99 ILE 99 98 98 ILE ILE A . n A 1 100 SER 100 99 99 SER SER A . n A 1 101 PHE 101 100 100 PHE PHE A . n A 1 102 VAL 102 101 101 VAL VAL A . n A 1 103 ALA 103 102 102 ALA ALA A . n A 1 104 GLU 104 103 103 GLU GLU A . n A 1 105 VAL 105 104 104 VAL VAL A . n A 1 106 SER 106 105 105 SER SER A . n A 1 107 LYS 107 106 106 LYS LYS A . n A 1 108 ALA 108 107 107 ALA ALA A . n A 1 109 ILE 109 108 108 ILE ILE A . n A 1 110 ARG 110 109 109 ARG ARG A . n A 1 111 SER 111 110 110 SER SER A . n A 1 112 HIS 112 111 111 HIS HIS A . n A 1 113 ARG 113 112 112 ARG ARG A . n A 1 114 TYR 114 113 ? ? ? A . n A 1 115 SER 115 114 ? ? ? A . n A 1 116 GLY 116 115 ? ? ? A . n A 1 117 GLY 117 116 ? ? ? A . n A 1 118 LEU 118 117 ? ? ? A . n A 1 119 THR 119 118 118 THR THR A . n A 1 120 PRO 120 119 119 PRO PRO A . n A 1 121 THR 121 120 120 THR THR A . n A 1 122 SER 122 121 121 SER SER A . n A 1 123 LEU 123 122 122 LEU LEU A . n A 1 124 THR 124 123 123 THR THR A . n A 1 125 GLY 125 124 124 GLY GLY A . n A 1 126 LYS 126 125 125 LYS LYS A . n A 1 127 ILE 127 126 126 ILE ILE A . n A 1 128 LEU 128 127 127 LEU LEU A . n A 1 129 GLN 129 128 128 GLN GLN A . n A 1 130 ASP 130 129 129 ASP ASP A . n A 1 131 ALA 131 130 130 ALA ALA A . n A 1 132 ASP 132 131 131 ASP ASP A . n A 1 133 ARG 133 132 132 ARG ARG A . n A 1 134 LEU 134 133 133 LEU LEU A . n A 1 135 ASP 135 134 134 ASP ASP A . n A 1 136 ALA 136 135 135 ALA ALA A . n A 1 137 ILE 137 136 136 ILE ILE A . n A 1 138 GLY 138 137 137 GLY GLY A . n A 1 139 ALA 139 138 138 ALA ALA A . n A 1 140 VAL 140 139 139 VAL VAL A . n A 1 141 ALA 141 140 140 ALA ALA A . n A 1 142 ILE 142 141 141 ILE ILE A . n A 1 143 ALA 143 142 142 ALA ALA A . n A 1 144 ARG 144 143 143 ARG ARG A . n A 1 145 VAL 145 144 144 VAL VAL A . n A 1 146 PHE 146 145 145 PHE PHE A . n A 1 147 SER 147 146 146 SER SER A . n A 1 148 TYR 148 147 147 TYR TYR A . n A 1 149 SER 149 148 ? ? ? A . n A 1 150 GLY 150 149 ? ? ? A . n A 1 151 LYS 151 150 ? ? ? A . n A 1 152 THR 152 151 ? ? ? A . n A 1 153 GLY 153 152 ? ? ? A . n A 1 154 THR 154 153 ? ? ? A . n A 1 155 PRO 155 154 ? ? ? A . n A 1 156 LEU 156 155 ? ? ? A . n A 1 157 HIS 157 156 ? ? ? A . n A 1 158 SER 158 157 ? ? ? A . n A 1 159 LEU 159 158 ? ? ? A . n A 1 160 GLN 160 159 ? ? ? A . n A 1 161 PHE 161 160 ? ? ? A . n A 1 162 SER 162 161 ? ? ? A . n A 1 163 PRO 163 162 ? ? ? A . n A 1 164 ARG 164 163 ? ? ? A . n A 1 165 SER 165 164 ? ? ? A . n A 1 166 SER 166 165 ? ? ? A . n A 1 167 TYR 167 166 ? ? ? A . n A 1 168 SER 168 167 ? ? ? A . n A 1 169 GLY 169 168 ? ? ? A . n A 1 170 ASN 170 169 ? ? ? A . n A 1 171 SER 171 170 ? ? ? A . n A 1 172 ARG 172 171 ? ? ? A . n A 1 173 SER 173 172 ? ? ? A . n A 1 174 SER 174 173 ? ? ? A . n A 1 175 ILE 175 174 ? ? ? A . n A 1 176 ASN 176 175 ? ? ? A . n A 1 177 HIS 177 176 ? ? ? A . n A 1 178 PHE 178 177 ? ? ? A . n A 1 179 HIS 179 178 ? ? ? A . n A 1 180 GLU 180 179 ? ? ? A . n A 1 181 LYS 181 180 ? ? ? A . n A 1 182 ILE 182 181 ? ? ? A . n A 1 183 LEU 183 182 ? ? ? A . n A 1 184 LYS 184 183 ? ? ? A . n A 1 185 ILE 185 184 ? ? ? A . n A 1 186 ARG 186 185 ? ? ? A . n A 1 187 PRO 187 186 186 PRO PRO A . n A 1 188 GLU 188 187 187 GLU GLU A . n A 1 189 THR 189 188 188 THR THR A . n A 1 190 PHE 190 189 189 PHE PHE A . n A 1 191 TRP 191 190 190 TRP TRP A . n A 1 192 THR 192 191 191 THR THR A . n A 1 193 GLU 193 192 192 GLU GLU A . n A 1 194 THR 194 193 193 THR THR A . n A 1 195 ALA 195 194 194 ALA ALA A . n A 1 196 ARG 196 195 195 ARG ARG A . n A 1 197 LYS 197 196 196 LYS LYS A . n A 1 198 MSE 198 197 197 MSE MSE A . n A 1 199 ALA 199 198 198 ALA ALA A . n A 1 200 GLU 200 199 199 GLU GLU A . n A 1 201 ASP 201 200 200 ASP ASP A . n A 1 202 ARG 202 201 201 ARG ARG A . n A 1 203 TYR 203 202 202 TYR TYR A . n A 1 204 SER 204 203 203 SER SER A . n A 1 205 PHE 205 204 204 PHE PHE A . n A 1 206 VAL 206 205 205 VAL VAL A . n A 1 207 VAL 207 206 206 VAL VAL A . n A 1 208 GLU 208 207 207 GLU GLU A . n A 1 209 PHE 209 208 208 PHE PHE A . n A 1 210 VAL 210 209 209 VAL VAL A . n A 1 211 GLN 211 210 210 GLN GLN A . n A 1 212 ARG 212 211 211 ARG ARG A . n A 1 213 PHE 213 212 212 PHE PHE A . n A 1 214 LEU 214 213 213 LEU LEU A . n A 1 215 ALA 215 214 214 ALA ALA A . n A 1 216 GLU 216 215 215 GLU GLU A . n A 1 217 TRP 217 216 216 TRP TRP A . n A 1 218 GLY 218 217 217 GLY GLY A . n A 1 219 GLN 219 218 ? ? ? A . n A 1 220 ILE 220 219 ? ? ? A . n # _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FE 1 220 1 FE FE A . C 2 FE 1 221 2 FE FE A . D 3 CL 1 222 3 CL CL A . E 4 PO4 1 223 4 PO4 PO4 A . F 4 PO4 1 224 5 PO4 PO4 A . G 5 MPD 1 225 6 MPD MPD A . H 6 HOH 1 226 7 HOH HOH A . H 6 HOH 2 227 8 HOH HOH A . H 6 HOH 3 228 9 HOH HOH A . H 6 HOH 4 229 10 HOH HOH A . H 6 HOH 5 230 11 HOH HOH A . H 6 HOH 6 231 12 HOH HOH A . H 6 HOH 7 232 13 HOH HOH A . H 6 HOH 8 233 14 HOH HOH A . H 6 HOH 9 234 15 HOH HOH A . H 6 HOH 10 235 16 HOH HOH A . H 6 HOH 11 236 17 HOH HOH A . H 6 HOH 12 237 18 HOH HOH A . H 6 HOH 13 238 19 HOH HOH A . H 6 HOH 14 239 20 HOH HOH A . H 6 HOH 15 240 21 HOH HOH A . H 6 HOH 16 241 22 HOH HOH A . H 6 HOH 17 242 23 HOH HOH A . H 6 HOH 18 243 24 HOH HOH A . H 6 HOH 19 244 25 HOH HOH A . H 6 HOH 20 245 26 HOH HOH A . H 6 HOH 21 246 27 HOH HOH A . H 6 HOH 22 247 28 HOH HOH A . H 6 HOH 23 248 29 HOH HOH A . H 6 HOH 24 249 30 HOH HOH A . H 6 HOH 25 250 31 HOH HOH A . H 6 HOH 26 251 32 HOH HOH A . H 6 HOH 27 252 33 HOH HOH A . H 6 HOH 28 253 34 HOH HOH A . H 6 HOH 29 254 35 HOH HOH A . H 6 HOH 30 255 36 HOH HOH A . H 6 HOH 31 256 37 HOH HOH A . H 6 HOH 32 257 38 HOH HOH A . H 6 HOH 33 258 39 HOH HOH A . H 6 HOH 34 259 40 HOH HOH A . H 6 HOH 35 260 41 HOH HOH A . H 6 HOH 36 261 42 HOH HOH A . H 6 HOH 37 262 43 HOH HOH A . H 6 HOH 38 263 44 HOH HOH A . H 6 HOH 39 264 45 HOH HOH A . H 6 HOH 40 265 46 HOH HOH A . H 6 HOH 41 266 47 HOH HOH A . H 6 HOH 42 267 48 HOH HOH A . H 6 HOH 43 268 49 HOH HOH A . H 6 HOH 44 269 50 HOH HOH A . H 6 HOH 45 270 51 HOH HOH A . H 6 HOH 46 271 52 HOH HOH A . H 6 HOH 47 272 53 HOH HOH A . H 6 HOH 48 273 54 HOH HOH A . H 6 HOH 49 274 55 HOH HOH A . H 6 HOH 50 275 56 HOH HOH A . H 6 HOH 51 276 57 HOH HOH A . H 6 HOH 52 277 58 HOH HOH A . H 6 HOH 53 278 59 HOH HOH A . H 6 HOH 54 279 60 HOH HOH A . H 6 HOH 55 280 61 HOH HOH A . H 6 HOH 56 281 62 HOH HOH A . H 6 HOH 57 282 63 HOH HOH A . H 6 HOH 58 283 64 HOH HOH A . H 6 HOH 59 284 65 HOH HOH A . H 6 HOH 60 285 66 HOH HOH A . H 6 HOH 61 286 67 HOH HOH A . H 6 HOH 62 287 68 HOH HOH A . H 6 HOH 63 288 69 HOH HOH A . H 6 HOH 64 289 70 HOH HOH A . H 6 HOH 65 290 71 HOH HOH A . H 6 HOH 66 291 72 HOH HOH A . H 6 HOH 67 292 73 HOH HOH A . H 6 HOH 68 293 74 HOH HOH A . H 6 HOH 69 294 75 HOH HOH A . H 6 HOH 70 295 76 HOH HOH A . H 6 HOH 71 296 77 HOH HOH A . H 6 HOH 72 297 78 HOH HOH A . H 6 HOH 73 298 79 HOH HOH A . H 6 HOH 74 299 80 HOH HOH A . H 6 HOH 75 300 81 HOH HOH A . H 6 HOH 76 301 82 HOH HOH A . H 6 HOH 77 302 83 HOH HOH A . H 6 HOH 78 303 84 HOH HOH A . H 6 HOH 79 304 85 HOH HOH A . H 6 HOH 80 305 86 HOH HOH A . H 6 HOH 81 306 87 HOH HOH A . H 6 HOH 82 307 88 HOH HOH A . H 6 HOH 83 308 89 HOH HOH A . H 6 HOH 84 309 90 HOH HOH A . H 6 HOH 85 310 91 HOH HOH A . H 6 HOH 86 311 92 HOH HOH A . H 6 HOH 87 312 93 HOH HOH A . H 6 HOH 88 313 94 HOH HOH A . H 6 HOH 89 314 95 HOH HOH A . H 6 HOH 90 315 96 HOH HOH A . H 6 HOH 91 316 97 HOH HOH A . H 6 HOH 92 317 98 HOH HOH A . H 6 HOH 93 318 99 HOH HOH A . H 6 HOH 94 319 100 HOH HOH A . H 6 HOH 95 320 101 HOH HOH A . H 6 HOH 96 321 102 HOH HOH A . H 6 HOH 97 322 103 HOH HOH A . H 6 HOH 98 323 104 HOH HOH A . H 6 HOH 99 324 105 HOH HOH A . H 6 HOH 100 325 106 HOH HOH A . H 6 HOH 101 326 107 HOH HOH A . H 6 HOH 102 327 108 HOH HOH A . H 6 HOH 103 328 109 HOH HOH A . H 6 HOH 104 329 110 HOH HOH A . H 6 HOH 105 330 111 HOH HOH A . H 6 HOH 106 331 112 HOH HOH A . H 6 HOH 107 332 113 HOH HOH A . H 6 HOH 108 333 114 HOH HOH A . H 6 HOH 109 334 115 HOH HOH A . H 6 HOH 110 335 116 HOH HOH A . H 6 HOH 111 336 117 HOH HOH A . H 6 HOH 112 337 118 HOH HOH A . H 6 HOH 113 338 119 HOH HOH A . H 6 HOH 114 339 120 HOH HOH A . H 6 HOH 115 340 121 HOH HOH A . H 6 HOH 116 341 122 HOH HOH A . H 6 HOH 117 342 123 HOH HOH A . H 6 HOH 118 343 124 HOH HOH A . H 6 HOH 119 344 125 HOH HOH A . H 6 HOH 120 345 126 HOH HOH A . H 6 HOH 121 346 127 HOH HOH A . H 6 HOH 122 347 128 HOH HOH A . H 6 HOH 123 348 129 HOH HOH A . H 6 HOH 124 349 130 HOH HOH A . H 6 HOH 125 350 131 HOH HOH A . H 6 HOH 126 351 132 HOH HOH A . H 6 HOH 127 352 133 HOH HOH A . H 6 HOH 128 353 134 HOH HOH A . H 6 HOH 129 354 135 HOH HOH A . H 6 HOH 130 355 136 HOH HOH A . H 6 HOH 131 356 137 HOH HOH A . H 6 HOH 132 357 138 HOH HOH A . H 6 HOH 133 358 139 HOH HOH A . H 6 HOH 134 359 140 HOH HOH A . H 6 HOH 135 360 141 HOH HOH A . H 6 HOH 136 361 142 HOH HOH A . H 6 HOH 137 362 143 HOH HOH A . H 6 HOH 138 363 144 HOH HOH A . H 6 HOH 139 364 145 HOH HOH A . H 6 HOH 140 365 146 HOH HOH A . H 6 HOH 141 366 147 HOH HOH A . H 6 HOH 142 367 148 HOH HOH A . H 6 HOH 143 368 149 HOH HOH A . H 6 HOH 144 369 150 HOH HOH A . H 6 HOH 145 370 151 HOH HOH A . H 6 HOH 146 371 152 HOH HOH A . H 6 HOH 147 372 153 HOH HOH A . H 6 HOH 148 373 154 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 2 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 8 A MSE 7 ? MET SELENOMETHIONINE 3 A MSE 42 A MSE 41 ? MET SELENOMETHIONINE 4 A MSE 95 A MSE 94 ? MET SELENOMETHIONINE 5 A MSE 198 A MSE 197 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_656 -x+1,y,-z+1 -1.0000000000 0.0000000000 0.0000000000 135.0142736293 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 37.6262198808 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A HIS 37 ? A HIS 36 ? 1_555 FE ? C FE . ? A FE 221 ? 1_555 NE2 ? A HIS 66 ? A HIS 65 ? 1_555 104.7 ? 2 NE2 ? A HIS 37 ? A HIS 36 ? 1_555 FE ? C FE . ? A FE 221 ? 1_555 OD2 ? A ASP 67 ? A ASP 66 ? 1_555 93.7 ? 3 NE2 ? A HIS 66 ? A HIS 65 ? 1_555 FE ? C FE . ? A FE 221 ? 1_555 OD2 ? A ASP 67 ? A ASP 66 ? 1_555 81.4 ? 4 NE2 ? A HIS 37 ? A HIS 36 ? 1_555 FE ? C FE . ? A FE 221 ? 1_555 OD1 ? A ASP 132 ? A ASP 131 ? 1_555 84.3 ? 5 NE2 ? A HIS 66 ? A HIS 65 ? 1_555 FE ? C FE . ? A FE 221 ? 1_555 OD1 ? A ASP 132 ? A ASP 131 ? 1_555 90.6 ? 6 OD2 ? A ASP 67 ? A ASP 66 ? 1_555 FE ? C FE . ? A FE 221 ? 1_555 OD1 ? A ASP 132 ? A ASP 131 ? 1_555 171.0 ? 7 NE2 ? A HIS 37 ? A HIS 36 ? 1_555 FE ? C FE . ? A FE 221 ? 1_555 O4 ? E PO4 . ? A PO4 223 ? 1_555 83.2 ? 8 NE2 ? A HIS 66 ? A HIS 65 ? 1_555 FE ? C FE . ? A FE 221 ? 1_555 O4 ? E PO4 . ? A PO4 223 ? 1_555 167.9 ? 9 OD2 ? A ASP 67 ? A ASP 66 ? 1_555 FE ? C FE . ? A FE 221 ? 1_555 O4 ? E PO4 . ? A PO4 223 ? 1_555 89.0 ? 10 OD1 ? A ASP 132 ? A ASP 131 ? 1_555 FE ? C FE . ? A FE 221 ? 1_555 O4 ? E PO4 . ? A PO4 223 ? 1_555 99.4 ? 11 NE2 ? A HIS 37 ? A HIS 36 ? 1_555 FE ? C FE . ? A FE 221 ? 1_555 O ? H HOH . ? A HOH 236 ? 1_555 160.9 ? 12 NE2 ? A HIS 66 ? A HIS 65 ? 1_555 FE ? C FE . ? A FE 221 ? 1_555 O ? H HOH . ? A HOH 236 ? 1_555 93.3 ? 13 OD2 ? A ASP 67 ? A ASP 66 ? 1_555 FE ? C FE . ? A FE 221 ? 1_555 O ? H HOH . ? A HOH 236 ? 1_555 95.4 ? 14 OD1 ? A ASP 132 ? A ASP 131 ? 1_555 FE ? C FE . ? A FE 221 ? 1_555 O ? H HOH . ? A HOH 236 ? 1_555 89.2 ? 15 O4 ? E PO4 . ? A PO4 223 ? 1_555 FE ? C FE . ? A FE 221 ? 1_555 O ? H HOH . ? A HOH 236 ? 1_555 80.1 ? 16 OD1 ? A ASP 67 ? A ASP 66 ? 1_555 FE ? B FE . ? A FE 220 ? 1_555 NE2 ? A HIS 80 ? A HIS 79 ? 1_555 86.9 ? 17 OD1 ? A ASP 67 ? A ASP 66 ? 1_555 FE ? B FE . ? A FE 220 ? 1_555 NE2 ? A HIS 112 ? A HIS 111 ? 1_555 96.6 ? 18 NE2 ? A HIS 80 ? A HIS 79 ? 1_555 FE ? B FE . ? A FE 220 ? 1_555 NE2 ? A HIS 112 ? A HIS 111 ? 1_555 90.4 ? 19 OD1 ? A ASP 67 ? A ASP 66 ? 1_555 FE ? B FE . ? A FE 220 ? 1_555 O3 ? E PO4 . ? A PO4 223 ? 1_555 91.3 ? 20 NE2 ? A HIS 80 ? A HIS 79 ? 1_555 FE ? B FE . ? A FE 220 ? 1_555 O3 ? E PO4 . ? A PO4 223 ? 1_555 92.4 ? 21 NE2 ? A HIS 112 ? A HIS 111 ? 1_555 FE ? B FE . ? A FE 220 ? 1_555 O3 ? E PO4 . ? A PO4 223 ? 1_555 171.7 ? 22 OD1 ? A ASP 67 ? A ASP 66 ? 1_555 FE ? B FE . ? A FE 220 ? 1_555 O3 ? F PO4 . ? A PO4 224 ? 1_555 173.9 ? 23 NE2 ? A HIS 80 ? A HIS 79 ? 1_555 FE ? B FE . ? A FE 220 ? 1_555 O3 ? F PO4 . ? A PO4 224 ? 1_555 87.7 ? 24 NE2 ? A HIS 112 ? A HIS 111 ? 1_555 FE ? B FE . ? A FE 220 ? 1_555 O3 ? F PO4 . ? A PO4 224 ? 1_555 86.3 ? 25 O3 ? E PO4 . ? A PO4 223 ? 1_555 FE ? B FE . ? A FE 220 ? 1_555 O3 ? F PO4 . ? A PO4 224 ? 1_555 86.0 ? 26 OD1 ? A ASP 67 ? A ASP 66 ? 1_555 FE ? B FE . ? A FE 220 ? 1_555 O ? H HOH . ? A HOH 236 ? 1_555 92.5 ? 27 NE2 ? A HIS 80 ? A HIS 79 ? 1_555 FE ? B FE . ? A FE 220 ? 1_555 O ? H HOH . ? A HOH 236 ? 1_555 177.4 ? 28 NE2 ? A HIS 112 ? A HIS 111 ? 1_555 FE ? B FE . ? A FE 220 ? 1_555 O ? H HOH . ? A HOH 236 ? 1_555 87.1 ? 29 O3 ? E PO4 . ? A PO4 223 ? 1_555 FE ? B FE . ? A FE 220 ? 1_555 O ? H HOH . ? A HOH 236 ? 1_555 90.2 ? 30 O3 ? F PO4 . ? A PO4 224 ? 1_555 FE ? B FE . ? A FE 220 ? 1_555 O ? H HOH . ? A HOH 236 ? 1_555 93.0 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-05-15 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-18 5 'Structure model' 1 4 2023-01-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Refinement description' 4 5 'Structure model' 'Database references' 5 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' database_2 3 5 'Structure model' pdbx_struct_conn_angle 4 5 'Structure model' struct_conn 5 5 'Structure model' struct_conn_type 6 5 'Structure model' struct_ref_seq_dif 7 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.classification' 2 4 'Structure model' '_software.name' 3 5 'Structure model' '_database_2.pdbx_DOI' 4 5 'Structure model' '_database_2.pdbx_database_accession' 5 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 7 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 8 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 9 5 'Structure model' '_pdbx_struct_conn_angle.value' 10 5 'Structure model' '_struct_conn.conn_type_id' 11 5 'Structure model' '_struct_conn.id' 12 5 'Structure model' '_struct_conn.pdbx_dist_value' 13 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 14 5 'Structure model' '_struct_conn.pdbx_ptnr1_label_alt_id' 15 5 'Structure model' '_struct_conn.pdbx_ptnr2_label_alt_id' 16 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 17 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 18 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 19 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 20 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 21 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 22 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 23 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 24 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 25 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 26 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 27 5 'Structure model' '_struct_conn.ptnr2_label_seq_id' 28 5 'Structure model' '_struct_conn_type.id' 29 5 'Structure model' '_struct_ref_seq_dif.details' 30 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 31 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 32 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _phasing.method MAD # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 1 SHELX . ? package 'George Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 2 REFMAC 5.2.0005 ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran_77 ? 3 SCALA . ? other 'Phil Evans' pre@mrc-lmb.cam.ac.uk 'data scaling' http://www.ccp4.ac.uk/dist/html/INDEX.html Fortran_77 ? 4 PDB_EXTRACT 2.000 'April. 3, 2006' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 5 MAR345 CCD ? ? ? ? 'data collection' ? ? ? 6 MOSFLM . ? ? ? ? 'data reduction' ? ? ? 7 CCP4 '(SCALA)' ? ? ? ? 'data scaling' ? ? ? 8 SHELXD . ? ? ? ? phasing ? ? ? 9 autoSHARP . ? ? ? ? phasing ? ? ? 10 # _pdbx_database_remark.id 999 _pdbx_database_remark.text ; SEQUENCE THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. ; # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id HIS _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 32 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -144.63 _pdbx_validate_torsion.psi 19.24 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LEU 3 ? CD1 ? A LEU 4 CD1 2 1 Y 1 A LEU 3 ? CD2 ? A LEU 4 CD2 3 1 Y 1 A ARG 14 ? NE ? A ARG 15 NE 4 1 Y 1 A ARG 14 ? CZ ? A ARG 15 CZ 5 1 Y 1 A ARG 14 ? NH1 ? A ARG 15 NH1 6 1 Y 1 A ARG 14 ? NH2 ? A ARG 15 NH2 7 1 Y 1 A GLU 15 ? CG ? A GLU 16 CG 8 1 Y 1 A GLU 15 ? CD ? A GLU 16 CD 9 1 Y 1 A GLU 15 ? OE1 ? A GLU 16 OE1 10 1 Y 1 A GLU 15 ? OE2 ? A GLU 16 OE2 11 1 Y 1 A ARG 21 ? CZ ? A ARG 22 CZ 12 1 Y 1 A ARG 21 ? NH1 ? A ARG 22 NH1 13 1 Y 1 A ARG 21 ? NH2 ? A ARG 22 NH2 14 1 Y 1 A LYS 25 ? CE ? A LYS 26 CE 15 1 Y 1 A LYS 25 ? NZ ? A LYS 26 NZ 16 1 Y 1 A ASP 26 ? CG ? A ASP 27 CG 17 1 Y 1 A ASP 26 ? OD1 ? A ASP 27 OD1 18 1 Y 1 A ASP 26 ? OD2 ? A ASP 27 OD2 19 1 Y 1 A ASP 28 ? CG ? A ASP 29 CG 20 1 Y 1 A ASP 28 ? OD1 ? A ASP 29 OD1 21 1 Y 1 A ASP 28 ? OD2 ? A ASP 29 OD2 22 1 Y 1 A GLU 46 ? CD ? A GLU 47 CD 23 1 Y 1 A GLU 46 ? OE1 ? A GLU 47 OE1 24 1 Y 1 A GLU 46 ? OE2 ? A GLU 47 OE2 25 1 Y 1 A ARG 50 ? CZ ? A ARG 51 CZ 26 1 Y 1 A ARG 50 ? NH1 ? A ARG 51 NH1 27 1 Y 1 A ARG 50 ? NH2 ? A ARG 51 NH2 28 1 Y 1 A GLU 81 ? CD ? A GLU 82 CD 29 1 Y 1 A GLU 81 ? OE1 ? A GLU 82 OE1 30 1 Y 1 A GLU 81 ? OE2 ? A GLU 82 OE2 31 1 Y 1 A LYS 106 ? CE ? A LYS 107 CE 32 1 Y 1 A LYS 106 ? NZ ? A LYS 107 NZ 33 1 Y 1 A TYR 147 ? CG ? A TYR 148 CG 34 1 Y 1 A TYR 147 ? CD1 ? A TYR 148 CD1 35 1 Y 1 A TYR 147 ? CD2 ? A TYR 148 CD2 36 1 Y 1 A TYR 147 ? CE1 ? A TYR 148 CE1 37 1 Y 1 A TYR 147 ? CE2 ? A TYR 148 CE2 38 1 Y 1 A TYR 147 ? CZ ? A TYR 148 CZ 39 1 Y 1 A TYR 147 ? OH ? A TYR 148 OH 40 1 Y 1 A GLU 199 ? CD ? A GLU 200 CD 41 1 Y 1 A GLU 199 ? OE1 ? A GLU 200 OE1 42 1 Y 1 A GLU 199 ? OE2 ? A GLU 200 OE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 0 ? A GLY 1 2 1 Y 1 A TYR 113 ? A TYR 114 3 1 Y 1 A SER 114 ? A SER 115 4 1 Y 1 A GLY 115 ? A GLY 116 5 1 Y 1 A GLY 116 ? A GLY 117 6 1 Y 1 A LEU 117 ? A LEU 118 7 1 Y 1 A SER 148 ? A SER 149 8 1 Y 1 A GLY 149 ? A GLY 150 9 1 Y 1 A LYS 150 ? A LYS 151 10 1 Y 1 A THR 151 ? A THR 152 11 1 Y 1 A GLY 152 ? A GLY 153 12 1 Y 1 A THR 153 ? A THR 154 13 1 Y 1 A PRO 154 ? A PRO 155 14 1 Y 1 A LEU 155 ? A LEU 156 15 1 Y 1 A HIS 156 ? A HIS 157 16 1 Y 1 A SER 157 ? A SER 158 17 1 Y 1 A LEU 158 ? A LEU 159 18 1 Y 1 A GLN 159 ? A GLN 160 19 1 Y 1 A PHE 160 ? A PHE 161 20 1 Y 1 A SER 161 ? A SER 162 21 1 Y 1 A PRO 162 ? A PRO 163 22 1 Y 1 A ARG 163 ? A ARG 164 23 1 Y 1 A SER 164 ? A SER 165 24 1 Y 1 A SER 165 ? A SER 166 25 1 Y 1 A TYR 166 ? A TYR 167 26 1 Y 1 A SER 167 ? A SER 168 27 1 Y 1 A GLY 168 ? A GLY 169 28 1 Y 1 A ASN 169 ? A ASN 170 29 1 Y 1 A SER 170 ? A SER 171 30 1 Y 1 A ARG 171 ? A ARG 172 31 1 Y 1 A SER 172 ? A SER 173 32 1 Y 1 A SER 173 ? A SER 174 33 1 Y 1 A ILE 174 ? A ILE 175 34 1 Y 1 A ASN 175 ? A ASN 176 35 1 Y 1 A HIS 176 ? A HIS 177 36 1 Y 1 A PHE 177 ? A PHE 178 37 1 Y 1 A HIS 178 ? A HIS 179 38 1 Y 1 A GLU 179 ? A GLU 180 39 1 Y 1 A LYS 180 ? A LYS 181 40 1 Y 1 A ILE 181 ? A ILE 182 41 1 Y 1 A LEU 182 ? A LEU 183 42 1 Y 1 A LYS 183 ? A LYS 184 43 1 Y 1 A ILE 184 ? A ILE 185 44 1 Y 1 A ARG 185 ? A ARG 186 45 1 Y 1 A GLN 218 ? A GLN 219 46 1 Y 1 A ILE 219 ? A ILE 220 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'FE (III) ION' FE 3 'CHLORIDE ION' CL 4 'PHOSPHATE ION' PO4 5 '(4S)-2-METHYL-2,4-PENTANEDIOL' MPD 6 water HOH #