data_2PQK # _entry.id 2PQK # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2PQK RCSB RCSB042677 WWPDB D_1000042677 # _pdbx_database_status.entry_id 2PQK _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2007-05-02 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Bare, E.' 1 'Grant, R.A.' 2 'Keating, A.E.' 3 # _citation.id primary _citation.title 'Mcl-1-Bim complexes accommodate surprising point mutations via minor structural changes.' _citation.journal_abbrev 'Protein Sci.' _citation.journal_volume 19 _citation.page_first 507 _citation.page_last 519 _citation.year 2010 _citation.journal_id_ASTM PRCIEI _citation.country US _citation.journal_id_ISSN 0961-8368 _citation.journal_id_CSD 0795 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20066663 _citation.pdbx_database_id_DOI 10.1002/pro.329 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Fire, E.' 1 primary 'Gulla, S.V.' 2 primary 'Grant, R.A.' 3 primary 'Keating, A.E.' 4 # _cell.entry_id 2PQK _cell.length_a 53.087 _cell.length_b 71.846 _cell.length_c 118.145 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2PQK _symmetry.space_group_name_H-M 'I 2 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Induced myeloid leukemia cell differentiation protein Mcl-1' 17937.359 1 ? ? 'residues 172-327' ? 2 polymer syn 'Bim BH3 peptide' 3385.771 1 ? ? ? ? 3 non-polymer syn 'ZINC ION' 65.409 3 ? ? ? ? 4 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 5 water nat water 18.015 118 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Bcl-2- related protein EAT/mcl1, mcl1/EAT' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GSDELYRQSLEIISRYLREQATGAKDTKPMGRSGATSRKALETLRRVGDGVQRNHETAFQGMLRKLDIKNEDDVKSLSRV MIHVFSDGVTNWGRIVTLISFGAFVAKHLKTINQESCIEPLAESITDVLVRTKRDWLVKQRGWDGFVEFFHVEDLEGG ; ;GSDELYRQSLEIISRYLREQATGAKDTKPMGRSGATSRKALETLRRVGDGVQRNHETAFQGMLRKLDIKNEDDVKSLSRV MIHVFSDGVTNWGRIVTLISFGAFVAKHLKTINQESCIEPLAESITDVLVRTKRDWLVKQRGWDGFVEFFHVEDLEGG ; A ? 2 'polypeptide(L)' no no GGSGRPEIWIAQELRRIGDEFNAYYARRV GGSGRPEIWIAQELRRIGDEFNAYYARRV B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 ASP n 1 4 GLU n 1 5 LEU n 1 6 TYR n 1 7 ARG n 1 8 GLN n 1 9 SER n 1 10 LEU n 1 11 GLU n 1 12 ILE n 1 13 ILE n 1 14 SER n 1 15 ARG n 1 16 TYR n 1 17 LEU n 1 18 ARG n 1 19 GLU n 1 20 GLN n 1 21 ALA n 1 22 THR n 1 23 GLY n 1 24 ALA n 1 25 LYS n 1 26 ASP n 1 27 THR n 1 28 LYS n 1 29 PRO n 1 30 MET n 1 31 GLY n 1 32 ARG n 1 33 SER n 1 34 GLY n 1 35 ALA n 1 36 THR n 1 37 SER n 1 38 ARG n 1 39 LYS n 1 40 ALA n 1 41 LEU n 1 42 GLU n 1 43 THR n 1 44 LEU n 1 45 ARG n 1 46 ARG n 1 47 VAL n 1 48 GLY n 1 49 ASP n 1 50 GLY n 1 51 VAL n 1 52 GLN n 1 53 ARG n 1 54 ASN n 1 55 HIS n 1 56 GLU n 1 57 THR n 1 58 ALA n 1 59 PHE n 1 60 GLN n 1 61 GLY n 1 62 MET n 1 63 LEU n 1 64 ARG n 1 65 LYS n 1 66 LEU n 1 67 ASP n 1 68 ILE n 1 69 LYS n 1 70 ASN n 1 71 GLU n 1 72 ASP n 1 73 ASP n 1 74 VAL n 1 75 LYS n 1 76 SER n 1 77 LEU n 1 78 SER n 1 79 ARG n 1 80 VAL n 1 81 MET n 1 82 ILE n 1 83 HIS n 1 84 VAL n 1 85 PHE n 1 86 SER n 1 87 ASP n 1 88 GLY n 1 89 VAL n 1 90 THR n 1 91 ASN n 1 92 TRP n 1 93 GLY n 1 94 ARG n 1 95 ILE n 1 96 VAL n 1 97 THR n 1 98 LEU n 1 99 ILE n 1 100 SER n 1 101 PHE n 1 102 GLY n 1 103 ALA n 1 104 PHE n 1 105 VAL n 1 106 ALA n 1 107 LYS n 1 108 HIS n 1 109 LEU n 1 110 LYS n 1 111 THR n 1 112 ILE n 1 113 ASN n 1 114 GLN n 1 115 GLU n 1 116 SER n 1 117 CYS n 1 118 ILE n 1 119 GLU n 1 120 PRO n 1 121 LEU n 1 122 ALA n 1 123 GLU n 1 124 SER n 1 125 ILE n 1 126 THR n 1 127 ASP n 1 128 VAL n 1 129 LEU n 1 130 VAL n 1 131 ARG n 1 132 THR n 1 133 LYS n 1 134 ARG n 1 135 ASP n 1 136 TRP n 1 137 LEU n 1 138 VAL n 1 139 LYS n 1 140 GLN n 1 141 ARG n 1 142 GLY n 1 143 TRP n 1 144 ASP n 1 145 GLY n 1 146 PHE n 1 147 VAL n 1 148 GLU n 1 149 PHE n 1 150 PHE n 1 151 HIS n 1 152 VAL n 1 153 GLU n 1 154 ASP n 1 155 LEU n 1 156 GLU n 1 157 GLY n 1 158 GLY n 2 1 GLY n 2 2 GLY n 2 3 SER n 2 4 GLY n 2 5 ARG n 2 6 PRO n 2 7 GLU n 2 8 ILE n 2 9 TRP n 2 10 ILE n 2 11 ALA n 2 12 GLN n 2 13 GLU n 2 14 LEU n 2 15 ARG n 2 16 ARG n 2 17 ILE n 2 18 GLY n 2 19 ASP n 2 20 GLU n 2 21 PHE n 2 22 ASN n 2 23 ALA n 2 24 TYR n 2 25 TYR n 2 26 ALA n 2 27 ARG n 2 28 ARG n 2 29 VAL n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene MCL1 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 pLysS' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'Synthetic peptide, the sequence naturally occurs in Homo sapiens (Human)' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP MCL1_HUMAN Q07820 1 ;DELYRQSLEIISRYLREQATGAKDTKPMGRSGATSRKALETLRRVGDGVQRNHETAFQGMLRKLDIKNEDDVKSLSRVMI HVFSDGVTNWGRIVTLISFGAFVAKHLKTINQESCIEPLAESITDVLVRTKRDWLVKQRGWDGFVEFFHVEDLEGG ; 172 ? 2 PDB 2PQK 2PQK 2 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2PQK A 3 ? 158 ? Q07820 172 ? 327 ? 172 327 2 2 2PQK B 1 ? 29 ? 2PQK -3 ? 25 ? -3 25 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2PQK GLY A 1 ? UNP Q07820 ? ? 'CLONING ARTIFACT' 170 1 1 2PQK SER A 2 ? UNP Q07820 ? ? 'CLONING ARTIFACT' 171 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.crystals_number 1 _exptl.entry_id 2PQK _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.64 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 53.43 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details '0.2M zinc acetate, 0.1M imidazole, 20% PEG 3350, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2006-11-02 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.98166 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 24-ID-C' _diffrn_source.pdbx_wavelength 0.98166 _diffrn_source.pdbx_wavelength_list ? _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 24-ID-C # _reflns.entry_id 2PQK _reflns.d_resolution_high 2.000 _reflns.d_resolution_low 34.6 _reflns.number_obs 15537 _reflns.pdbx_Rmerge_I_obs 0.062 _reflns.pdbx_netI_over_sigmaI 11.900 _reflns.pdbx_chi_squared 1.469 _reflns.pdbx_redundancy 6.900 _reflns.percent_possible_obs 99.000 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.00 2.07 ? ? ? 0.335 ? ? 0.711 5.60 ? 1465 95.50 1 1 2.07 2.15 ? ? ? 0.237 ? ? 0.792 6.60 ? 1504 98.00 2 1 2.15 2.25 ? ? ? 0.182 ? ? 0.953 7.00 ? 1554 99.70 3 1 2.25 2.37 ? ? ? 0.138 ? ? 0.905 7.20 ? 1534 100.00 4 1 2.37 2.52 ? ? ? 0.114 ? ? 1.101 7.30 ? 1559 100.00 5 1 2.52 2.71 ? ? ? 0.092 ? ? 1.225 7.30 ? 1558 100.00 6 1 2.71 2.99 ? ? ? 0.076 ? ? 1.525 7.20 ? 1571 100.00 7 1 2.99 3.42 ? ? ? 0.066 ? ? 2.193 7.20 ? 1575 100.00 8 1 3.42 4.31 ? ? ? 0.052 ? ? 2.670 7.00 ? 1589 100.00 9 1 4.31 50.00 ? ? ? 0.040 ? ? 2.356 6.60 ? 1628 96.90 10 1 # _refine.entry_id 2PQK _refine.ls_d_res_high 2.000 _refine.ls_d_res_low 34.6 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 98.460 _refine.ls_number_reflns_obs 15537 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.ls_R_factor_obs 0.196 _refine.ls_R_factor_R_work 0.194 _refine.ls_R_factor_R_free 0.229 _refine.ls_percent_reflns_R_free 5.000 _refine.ls_number_reflns_R_free 776 _refine.B_iso_mean 36.035 _refine.aniso_B[1][1] -0.620 _refine.aniso_B[2][2] -0.860 _refine.aniso_B[3][3] 1.470 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.951 _refine.correlation_coeff_Fo_to_Fc_free 0.933 _refine.pdbx_overall_ESU_R 0.162 _refine.pdbx_overall_ESU_R_Free 0.148 _refine.overall_SU_ML 0.092 _refine.overall_SU_B 5.721 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_all ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1352 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 4 _refine_hist.number_atoms_solvent 118 _refine_hist.number_atoms_total 1474 _refine_hist.d_res_high 2.000 _refine_hist.d_res_low 34.6 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 1382 0.012 0.022 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1863 1.091 1.934 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 167 4.320 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 70 33.179 23.143 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 246 14.437 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 14 16.967 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 206 0.081 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1042 0.005 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 698 0.210 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 982 0.298 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 110 0.175 0.200 ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined 6 0.279 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 34 0.282 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 18 0.173 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined 4 0.103 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 833 0.646 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1337 1.211 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 573 1.941 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 526 3.117 4.500 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.995 _refine_ls_shell.d_res_low 2.047 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 87.970 _refine_ls_shell.number_reflns_R_work 964 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.204 _refine_ls_shell.R_factor_R_free 0.198 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 38 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs 1002 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2PQK _struct.title 'X-ray crystal structure of human Mcl-1 in complex with Bim BH3' _struct.pdbx_descriptor 'Induced myeloid leukemia cell differentiation protein Mcl-1, Bim BH3 peptide' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2PQK _struct_keywords.pdbx_keywords APOPTOSIS _struct_keywords.text 'Bcl-2 family, BH3 domain, APOPTOSIS' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? F N N 3 ? G N N 5 ? H N N 5 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 3 ? GLY A 23 ? ASP A 172 GLY A 192 1 ? 21 HELX_P HELX_P2 2 GLY A 34 ? ARG A 53 ? GLY A 203 ARG A 222 1 ? 20 HELX_P HELX_P3 3 HIS A 55 ? ASP A 67 ? HIS A 224 ASP A 236 1 ? 13 HELX_P HELX_P4 4 VAL A 74 ? PHE A 85 ? VAL A 243 PHE A 254 1 ? 12 HELX_P HELX_P5 5 SER A 86 ? GLY A 88 ? SER A 255 GLY A 257 5 ? 3 HELX_P HELX_P6 6 ASN A 91 ? ASN A 113 ? ASN A 260 ASN A 282 1 ? 23 HELX_P HELX_P7 7 ILE A 118 ? LYS A 133 ? ILE A 287 LYS A 302 1 ? 16 HELX_P HELX_P8 8 LYS A 133 ? GLN A 140 ? LYS A 302 GLN A 309 1 ? 8 HELX_P HELX_P9 9 GLY A 142 ? PHE A 150 ? GLY A 311 PHE A 319 1 ? 9 HELX_P HELX_P10 10 ARG B 5 ? ALA B 26 ? ARG B 1 ALA B 22 1 ? 22 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 117 SG ? ? ? 1_555 A CYS 117 SG ? ? A CYS 286 A CYS 286 3_556 ? ? ? ? ? ? ? 2.419 ? metalc1 metalc ? ? A GLU 71 OE2 ? ? ? 1_555 E NA . NA ? ? A GLU 240 A NA 404 1_555 ? ? ? ? ? ? ? 2.813 ? metalc2 metalc ? ? A ASP 72 OD1 ? ? ? 1_555 E NA . NA ? ? A ASP 241 A NA 404 1_555 ? ? ? ? ? ? ? 2.276 ? metalc3 metalc ? ? A ASP 72 OD2 ? ? ? 1_555 E NA . NA ? ? A ASP 241 A NA 404 1_555 ? ? ? ? ? ? ? 2.372 ? metalc4 metalc ? ? A ASP 135 OD1 ? ? ? 1_555 C ZN . ZN ? ? A ASP 304 A ZN 401 1_555 ? ? ? ? ? ? ? 2.001 ? metalc5 metalc ? ? A ASP 144 OD1 ? ? ? 1_555 D ZN . ZN ? ? A ASP 313 A ZN 402 1_555 ? ? ? ? ? ? ? 2.025 ? metalc6 metalc ? ? A GLU 148 OE2 ? ? ? 1_555 D ZN . ZN ? ? A GLU 317 A ZN 402 1_555 ? ? ? ? ? ? ? 1.800 ? metalc7 metalc ? ? B GLU 13 OE1 ? ? ? 1_555 F ZN . ZN ? ? B GLU 9 B ZN 403 1_555 ? ? ? ? ? ? ? 2.110 ? metalc8 metalc ? ? C ZN . ZN ? ? ? 1_555 G HOH . O ? ? A ZN 401 A HOH 53 1_555 ? ? ? ? ? ? ? 2.226 ? metalc9 metalc ? ? C ZN . ZN ? ? ? 1_555 G HOH . O ? ? A ZN 401 A HOH 93 1_555 ? ? ? ? ? ? ? 1.881 ? metalc10 metalc ? ? F ZN . ZN ? ? ? 1_555 H HOH . O ? ? B ZN 403 B HOH 416 1_555 ? ? ? ? ? ? ? 2.338 ? metalc11 metalc ? ? F ZN . ZN ? ? ? 1_555 H HOH . O ? ? B ZN 403 B HOH 421 1_555 ? ? ? ? ? ? ? 1.404 ? metalc12 metalc ? ? C ZN . ZN ? ? ? 1_555 A HIS 83 NE2 ? ? A ZN 401 A HIS 252 2_565 ? ? ? ? ? ? ? 1.905 ? metalc13 metalc ? ? D ZN . ZN ? ? ? 1_555 A HIS 55 NE2 ? ? A ZN 402 A HIS 224 8_455 ? ? ? ? ? ? ? 1.929 ? metalc14 metalc ? ? D ZN . ZN ? ? ? 1_555 B GLU 20 OE1 ? ? A ZN 402 B GLU 16 8_455 ? ? ? ? ? ? ? 2.412 ? metalc15 metalc ? ? D ZN . ZN ? ? ? 1_555 B GLU 20 OE2 ? ? A ZN 402 B GLU 16 8_455 ? ? ? ? ? ? ? 2.042 ? metalc16 metalc ? ? E NA . NA ? ? ? 1_555 A GLU 123 OE2 ? ? A NA 404 A GLU 292 3_556 ? ? ? ? ? ? ? 2.385 ? metalc17 metalc ? ? F ZN . ZN ? ? ? 1_555 A HIS 151 NE2 ? ? B ZN 403 A HIS 320 8_555 ? ? ? ? ? ? ? 2.046 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLY _struct_mon_prot_cis.label_seq_id 4 _struct_mon_prot_cis.label_asym_id B _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLY _struct_mon_prot_cis.auth_seq_id 0 _struct_mon_prot_cis.auth_asym_id B _struct_mon_prot_cis.pdbx_label_comp_id_2 ARG _struct_mon_prot_cis.pdbx_label_seq_id_2 5 _struct_mon_prot_cis.pdbx_label_asym_id_2 B _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 ARG _struct_mon_prot_cis.pdbx_auth_seq_id_2 1 _struct_mon_prot_cis.pdbx_auth_asym_id_2 B _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 3.40 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE ZN A 401' AC2 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE ZN A 402' AC3 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE ZN B 403' AC4 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE NA A 404' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 HOH G . ? HOH A 53 . ? 1_555 ? 2 AC1 4 HOH G . ? HOH A 93 . ? 1_555 ? 3 AC1 4 HIS A 83 ? HIS A 252 . ? 2_565 ? 4 AC1 4 ASP A 135 ? ASP A 304 . ? 1_555 ? 5 AC2 4 HIS A 55 ? HIS A 224 . ? 8_455 ? 6 AC2 4 ASP A 144 ? ASP A 313 . ? 1_555 ? 7 AC2 4 GLU A 148 ? GLU A 317 . ? 1_555 ? 8 AC2 4 GLU B 20 ? GLU B 16 . ? 8_455 ? 9 AC3 4 HIS A 151 ? HIS A 320 . ? 8_555 ? 10 AC3 4 GLU B 13 ? GLU B 9 . ? 1_555 ? 11 AC3 4 HOH H . ? HOH B 416 . ? 1_555 ? 12 AC3 4 HOH H . ? HOH B 421 . ? 1_555 ? 13 AC4 3 GLU A 71 ? GLU A 240 . ? 1_555 ? 14 AC4 3 ASP A 72 ? ASP A 241 . ? 1_555 ? 15 AC4 3 GLU A 123 ? GLU A 292 . ? 3_556 ? # _atom_sites.entry_id 2PQK _atom_sites.fract_transf_matrix[1][1] 0.018837 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013919 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008464 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N NA O S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 170 ? ? ? A . n A 1 2 SER 2 171 ? ? ? A . n A 1 3 ASP 3 172 172 ASP ASP A . n A 1 4 GLU 4 173 173 GLU GLU A . n A 1 5 LEU 5 174 174 LEU LEU A . n A 1 6 TYR 6 175 175 TYR TYR A . n A 1 7 ARG 7 176 176 ARG ARG A . n A 1 8 GLN 8 177 177 GLN GLN A . n A 1 9 SER 9 178 178 SER SER A . n A 1 10 LEU 10 179 179 LEU LEU A . n A 1 11 GLU 11 180 180 GLU GLU A . n A 1 12 ILE 12 181 181 ILE ILE A . n A 1 13 ILE 13 182 182 ILE ILE A . n A 1 14 SER 14 183 183 SER SER A . n A 1 15 ARG 15 184 184 ARG ARG A . n A 1 16 TYR 16 185 185 TYR TYR A . n A 1 17 LEU 17 186 186 LEU LEU A . n A 1 18 ARG 18 187 187 ARG ARG A . n A 1 19 GLU 19 188 188 GLU GLU A . n A 1 20 GLN 20 189 189 GLN GLN A . n A 1 21 ALA 21 190 190 ALA ALA A . n A 1 22 THR 22 191 191 THR THR A . n A 1 23 GLY 23 192 192 GLY GLY A . n A 1 24 ALA 24 193 193 ALA ALA A . n A 1 25 LYS 25 194 194 LYS LYS A . n A 1 26 ASP 26 195 195 ASP ASP A . n A 1 27 THR 27 196 196 THR THR A . n A 1 28 LYS 28 197 197 LYS LYS A . n A 1 29 PRO 29 198 ? ? ? A . n A 1 30 MET 30 199 ? ? ? A . n A 1 31 GLY 31 200 ? ? ? A . n A 1 32 ARG 32 201 ? ? ? A . n A 1 33 SER 33 202 ? ? ? A . n A 1 34 GLY 34 203 203 GLY GLY A . n A 1 35 ALA 35 204 204 ALA ALA A . n A 1 36 THR 36 205 205 THR THR A . n A 1 37 SER 37 206 206 SER SER A . n A 1 38 ARG 38 207 207 ARG ARG A . n A 1 39 LYS 39 208 208 LYS LYS A . n A 1 40 ALA 40 209 209 ALA ALA A . n A 1 41 LEU 41 210 210 LEU LEU A . n A 1 42 GLU 42 211 211 GLU GLU A . n A 1 43 THR 43 212 212 THR THR A . n A 1 44 LEU 44 213 213 LEU LEU A . n A 1 45 ARG 45 214 214 ARG ARG A . n A 1 46 ARG 46 215 215 ARG ARG A . n A 1 47 VAL 47 216 216 VAL VAL A . n A 1 48 GLY 48 217 217 GLY GLY A . n A 1 49 ASP 49 218 218 ASP ASP A . n A 1 50 GLY 50 219 219 GLY GLY A . n A 1 51 VAL 51 220 220 VAL VAL A . n A 1 52 GLN 52 221 221 GLN GLN A . n A 1 53 ARG 53 222 222 ARG ARG A . n A 1 54 ASN 54 223 223 ASN ASN A . n A 1 55 HIS 55 224 224 HIS HIS A . n A 1 56 GLU 56 225 225 GLU GLU A . n A 1 57 THR 57 226 226 THR THR A . n A 1 58 ALA 58 227 227 ALA ALA A . n A 1 59 PHE 59 228 228 PHE PHE A . n A 1 60 GLN 60 229 229 GLN GLN A . n A 1 61 GLY 61 230 230 GLY GLY A . n A 1 62 MET 62 231 231 MET MET A . n A 1 63 LEU 63 232 232 LEU LEU A . n A 1 64 ARG 64 233 233 ARG ARG A . n A 1 65 LYS 65 234 234 LYS LYS A . n A 1 66 LEU 66 235 235 LEU LEU A . n A 1 67 ASP 67 236 236 ASP ASP A . n A 1 68 ILE 68 237 237 ILE ILE A . n A 1 69 LYS 69 238 238 LYS LYS A . n A 1 70 ASN 70 239 239 ASN ASN A . n A 1 71 GLU 71 240 240 GLU GLU A . n A 1 72 ASP 72 241 241 ASP ASP A . n A 1 73 ASP 73 242 242 ASP ASP A . n A 1 74 VAL 74 243 243 VAL VAL A . n A 1 75 LYS 75 244 244 LYS LYS A . n A 1 76 SER 76 245 245 SER SER A . n A 1 77 LEU 77 246 246 LEU LEU A . n A 1 78 SER 78 247 247 SER SER A . n A 1 79 ARG 79 248 248 ARG ARG A . n A 1 80 VAL 80 249 249 VAL VAL A . n A 1 81 MET 81 250 250 MET MET A . n A 1 82 ILE 82 251 251 ILE ILE A . n A 1 83 HIS 83 252 252 HIS HIS A . n A 1 84 VAL 84 253 253 VAL VAL A . n A 1 85 PHE 85 254 254 PHE PHE A . n A 1 86 SER 86 255 255 SER SER A . n A 1 87 ASP 87 256 256 ASP ASP A . n A 1 88 GLY 88 257 257 GLY GLY A . n A 1 89 VAL 89 258 258 VAL VAL A . n A 1 90 THR 90 259 259 THR THR A . n A 1 91 ASN 91 260 260 ASN ASN A . n A 1 92 TRP 92 261 261 TRP TRP A . n A 1 93 GLY 93 262 262 GLY GLY A . n A 1 94 ARG 94 263 263 ARG ARG A . n A 1 95 ILE 95 264 264 ILE ILE A . n A 1 96 VAL 96 265 265 VAL VAL A . n A 1 97 THR 97 266 266 THR THR A . n A 1 98 LEU 98 267 267 LEU LEU A . n A 1 99 ILE 99 268 268 ILE ILE A . n A 1 100 SER 100 269 269 SER SER A . n A 1 101 PHE 101 270 270 PHE PHE A . n A 1 102 GLY 102 271 271 GLY GLY A . n A 1 103 ALA 103 272 272 ALA ALA A . n A 1 104 PHE 104 273 273 PHE PHE A . n A 1 105 VAL 105 274 274 VAL VAL A . n A 1 106 ALA 106 275 275 ALA ALA A . n A 1 107 LYS 107 276 276 LYS LYS A . n A 1 108 HIS 108 277 277 HIS HIS A . n A 1 109 LEU 109 278 278 LEU LEU A . n A 1 110 LYS 110 279 279 LYS LYS A . n A 1 111 THR 111 280 280 THR THR A . n A 1 112 ILE 112 281 281 ILE ILE A . n A 1 113 ASN 113 282 282 ASN ASN A . n A 1 114 GLN 114 283 283 GLN GLN A . n A 1 115 GLU 115 284 284 GLU GLU A . n A 1 116 SER 116 285 285 SER SER A . n A 1 117 CYS 117 286 286 CYS CYS A . n A 1 118 ILE 118 287 287 ILE ILE A . n A 1 119 GLU 119 288 288 GLU GLU A . n A 1 120 PRO 120 289 289 PRO PRO A . n A 1 121 LEU 121 290 290 LEU LEU A . n A 1 122 ALA 122 291 291 ALA ALA A . n A 1 123 GLU 123 292 292 GLU GLU A . n A 1 124 SER 124 293 293 SER SER A . n A 1 125 ILE 125 294 294 ILE ILE A . n A 1 126 THR 126 295 295 THR THR A . n A 1 127 ASP 127 296 296 ASP ASP A . n A 1 128 VAL 128 297 297 VAL VAL A . n A 1 129 LEU 129 298 298 LEU LEU A . n A 1 130 VAL 130 299 299 VAL VAL A . n A 1 131 ARG 131 300 300 ARG ARG A . n A 1 132 THR 132 301 301 THR THR A . n A 1 133 LYS 133 302 302 LYS LYS A . n A 1 134 ARG 134 303 303 ARG ARG A . n A 1 135 ASP 135 304 304 ASP ASP A . n A 1 136 TRP 136 305 305 TRP TRP A . n A 1 137 LEU 137 306 306 LEU LEU A . n A 1 138 VAL 138 307 307 VAL VAL A . n A 1 139 LYS 139 308 308 LYS LYS A . n A 1 140 GLN 140 309 309 GLN GLN A . n A 1 141 ARG 141 310 310 ARG ARG A . n A 1 142 GLY 142 311 311 GLY GLY A . n A 1 143 TRP 143 312 312 TRP TRP A . n A 1 144 ASP 144 313 313 ASP ASP A . n A 1 145 GLY 145 314 314 GLY GLY A . n A 1 146 PHE 146 315 315 PHE PHE A . n A 1 147 VAL 147 316 316 VAL VAL A . n A 1 148 GLU 148 317 317 GLU GLU A . n A 1 149 PHE 149 318 318 PHE PHE A . n A 1 150 PHE 150 319 319 PHE PHE A . n A 1 151 HIS 151 320 320 HIS HIS A . n A 1 152 VAL 152 321 321 VAL VAL A . n A 1 153 GLU 153 322 ? ? ? A . n A 1 154 ASP 154 323 ? ? ? A . n A 1 155 LEU 155 324 ? ? ? A . n A 1 156 GLU 156 325 ? ? ? A . n A 1 157 GLY 157 326 ? ? ? A . n A 1 158 GLY 158 327 ? ? ? A . n B 2 1 GLY 1 -3 ? ? ? B . n B 2 2 GLY 2 -2 ? ? ? B . n B 2 3 SER 3 -1 ? ? ? B . n B 2 4 GLY 4 0 0 GLY GLY B . n B 2 5 ARG 5 1 1 ARG ARG B . n B 2 6 PRO 6 2 2 PRO PRO B . n B 2 7 GLU 7 3 3 GLU GLU B . n B 2 8 ILE 8 4 4 ILE ILE B . n B 2 9 TRP 9 5 5 TRP TRP B . n B 2 10 ILE 10 6 6 ILE ILE B . n B 2 11 ALA 11 7 7 ALA ALA B . n B 2 12 GLN 12 8 8 GLN GLN B . n B 2 13 GLU 13 9 9 GLU GLU B . n B 2 14 LEU 14 10 10 LEU LEU B . n B 2 15 ARG 15 11 11 ARG ARG B . n B 2 16 ARG 16 12 12 ARG ARG B . n B 2 17 ILE 17 13 13 ILE ILE B . n B 2 18 GLY 18 14 14 GLY GLY B . n B 2 19 ASP 19 15 15 ASP ASP B . n B 2 20 GLU 20 16 16 GLU GLU B . n B 2 21 PHE 21 17 17 PHE PHE B . n B 2 22 ASN 22 18 18 ASN ASN B . n B 2 23 ALA 23 19 19 ALA ALA B . n B 2 24 TYR 24 20 20 TYR TYR B . n B 2 25 TYR 25 21 21 TYR TYR B . n B 2 26 ALA 26 22 22 ALA ALA B . n B 2 27 ARG 27 23 ? ? ? B . n B 2 28 ARG 28 24 ? ? ? B . n B 2 29 VAL 29 25 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ZN 1 401 401 ZN ZN A . D 3 ZN 1 402 402 ZN ZN A . E 4 NA 1 404 404 NA NA A . F 3 ZN 1 403 403 ZN ZN B . G 5 HOH 1 1 1 HOH HOH A . G 5 HOH 2 2 2 HOH HOH A . G 5 HOH 3 3 3 HOH HOH A . G 5 HOH 4 4 4 HOH HOH A . G 5 HOH 5 5 5 HOH HOH A . G 5 HOH 6 6 6 HOH HOH A . G 5 HOH 7 7 7 HOH HOH A . G 5 HOH 8 8 8 HOH HOH A . G 5 HOH 9 9 9 HOH HOH A . G 5 HOH 10 10 10 HOH HOH A . G 5 HOH 11 11 11 HOH HOH A . G 5 HOH 12 12 12 HOH HOH A . G 5 HOH 13 13 13 HOH HOH A . G 5 HOH 14 14 14 HOH HOH A . G 5 HOH 15 15 15 HOH HOH A . G 5 HOH 16 16 16 HOH HOH A . G 5 HOH 17 21 21 HOH HOH A . G 5 HOH 18 22 22 HOH HOH A . G 5 HOH 19 23 23 HOH HOH A . G 5 HOH 20 24 24 HOH HOH A . G 5 HOH 21 25 25 HOH HOH A . G 5 HOH 22 26 26 HOH HOH A . G 5 HOH 23 29 29 HOH HOH A . G 5 HOH 24 30 30 HOH HOH A . G 5 HOH 25 31 31 HOH HOH A . G 5 HOH 26 32 32 HOH HOH A . G 5 HOH 27 33 33 HOH HOH A . G 5 HOH 28 35 35 HOH HOH A . G 5 HOH 29 36 36 HOH HOH A . G 5 HOH 30 38 38 HOH HOH A . G 5 HOH 31 39 39 HOH HOH A . G 5 HOH 32 40 40 HOH HOH A . G 5 HOH 33 42 42 HOH HOH A . G 5 HOH 34 43 43 HOH HOH A . G 5 HOH 35 45 45 HOH HOH A . G 5 HOH 36 46 46 HOH HOH A . G 5 HOH 37 48 48 HOH HOH A . G 5 HOH 38 49 49 HOH HOH A . G 5 HOH 39 52 52 HOH HOH A . G 5 HOH 40 53 53 HOH HOH A . G 5 HOH 41 54 54 HOH HOH A . G 5 HOH 42 55 55 HOH HOH A . G 5 HOH 43 56 56 HOH HOH A . G 5 HOH 44 57 57 HOH HOH A . G 5 HOH 45 58 58 HOH HOH A . G 5 HOH 46 59 59 HOH HOH A . G 5 HOH 47 60 60 HOH HOH A . G 5 HOH 48 62 62 HOH HOH A . G 5 HOH 49 64 64 HOH HOH A . G 5 HOH 50 65 65 HOH HOH A . G 5 HOH 51 67 67 HOH HOH A . G 5 HOH 52 68 68 HOH HOH A . G 5 HOH 53 69 69 HOH HOH A . G 5 HOH 54 70 70 HOH HOH A . G 5 HOH 55 71 71 HOH HOH A . G 5 HOH 56 72 72 HOH HOH A . G 5 HOH 57 73 73 HOH HOH A . G 5 HOH 58 75 75 HOH HOH A . G 5 HOH 59 76 76 HOH HOH A . G 5 HOH 60 78 78 HOH HOH A . G 5 HOH 61 79 79 HOH HOH A . G 5 HOH 62 80 80 HOH HOH A . G 5 HOH 63 81 81 HOH HOH A . G 5 HOH 64 82 82 HOH HOH A . G 5 HOH 65 84 84 HOH HOH A . G 5 HOH 66 85 85 HOH HOH A . G 5 HOH 67 86 86 HOH HOH A . G 5 HOH 68 88 88 HOH HOH A . G 5 HOH 69 90 90 HOH HOH A . G 5 HOH 70 91 91 HOH HOH A . G 5 HOH 71 92 92 HOH HOH A . G 5 HOH 72 93 93 HOH HOH A . G 5 HOH 73 94 94 HOH HOH A . G 5 HOH 74 96 96 HOH HOH A . G 5 HOH 75 97 97 HOH HOH A . G 5 HOH 76 98 98 HOH HOH A . G 5 HOH 77 99 99 HOH HOH A . G 5 HOH 78 100 100 HOH HOH A . G 5 HOH 79 101 101 HOH HOH A . G 5 HOH 80 102 102 HOH HOH A . G 5 HOH 81 103 103 HOH HOH A . G 5 HOH 82 104 104 HOH HOH A . G 5 HOH 83 105 105 HOH HOH A . G 5 HOH 84 106 106 HOH HOH A . G 5 HOH 85 107 107 HOH HOH A . G 5 HOH 86 108 108 HOH HOH A . G 5 HOH 87 109 109 HOH HOH A . G 5 HOH 88 110 110 HOH HOH A . G 5 HOH 89 111 111 HOH HOH A . G 5 HOH 90 112 112 HOH HOH A . G 5 HOH 91 114 114 HOH HOH A . G 5 HOH 92 115 115 HOH HOH A . G 5 HOH 93 116 116 HOH HOH A . G 5 HOH 94 117 117 HOH HOH A . G 5 HOH 95 118 118 HOH HOH A . H 5 HOH 1 404 17 HOH HOH B . H 5 HOH 2 405 18 HOH HOH B . H 5 HOH 3 406 19 HOH HOH B . H 5 HOH 4 407 20 HOH HOH B . H 5 HOH 5 408 27 HOH HOH B . H 5 HOH 6 409 28 HOH HOH B . H 5 HOH 7 410 34 HOH HOH B . H 5 HOH 8 411 37 HOH HOH B . H 5 HOH 9 412 41 HOH HOH B . H 5 HOH 10 413 44 HOH HOH B . H 5 HOH 11 414 47 HOH HOH B . H 5 HOH 12 415 50 HOH HOH B . H 5 HOH 13 416 51 HOH HOH B . H 5 HOH 14 417 61 HOH HOH B . H 5 HOH 15 418 63 HOH HOH B . H 5 HOH 16 419 66 HOH HOH B . H 5 HOH 17 420 74 HOH HOH B . H 5 HOH 18 421 77 HOH HOH B . H 5 HOH 19 422 83 HOH HOH B . H 5 HOH 20 423 87 HOH HOH B . H 5 HOH 21 424 89 HOH HOH B . H 5 HOH 22 425 95 HOH HOH B . H 5 HOH 23 426 113 HOH HOH B . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA dimeric 2 2 software_defined_assembly PISA octameric 8 3 software_defined_assembly PISA octameric 8 4 software_defined_assembly PISA tetrameric 4 5 software_defined_assembly PISA tetrameric 4 6 software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D,E,F,G,H 2 1,2,3,4 A,B,C,D,E,F,G,H 3 1,2,3,4 A,C,D,E,G 3 5,6,7,8 B,F,H 4 1,2 A,B,C,D,E,F,G,H 5 1,2 A,C,D,E,G 5 7,8 B,F,H 6 1 A,C,D,E,G 6 8 B,F,H # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2310 ? 1 MORE -79 ? 1 'SSA (A^2)' 8620 ? 2 'ABSA (A^2)' 13510 ? 2 MORE -434 ? 2 'SSA (A^2)' 30180 ? 3 'ABSA (A^2)' 7650 ? 3 MORE -455 ? 3 'SSA (A^2)' 36040 ? 4 'ABSA (A^2)' 6010 ? 4 MORE -206 ? 4 'SSA (A^2)' 15830 ? 5 'ABSA (A^2)' 3080 ? 5 MORE -216 ? 5 'SSA (A^2)' 18760 ? 6 'ABSA (A^2)' 960 ? 6 MORE -91 ? 6 'SSA (A^2)' 9960 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_565 -x,-y+1,z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 71.8460000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_556 -x,y,-z+1 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 118.1450000000 4 'crystal symmetry operation' 4_566 x,-y+1,-z+1 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 71.8460000000 0.0000000000 0.0000000000 -1.0000000000 118.1450000000 5 'crystal symmetry operation' 5_455 x-1/2,y+1/2,z+1/2 1.0000000000 0.0000000000 0.0000000000 -26.5435000000 0.0000000000 1.0000000000 0.0000000000 35.9230000000 0.0000000000 0.0000000000 1.0000000000 59.0725000000 6 'crystal symmetry operation' 6_555 -x+1/2,-y+1/2,z+1/2 -1.0000000000 0.0000000000 0.0000000000 26.5435000000 0.0000000000 -1.0000000000 0.0000000000 35.9230000000 0.0000000000 0.0000000000 1.0000000000 59.0725000000 7 'crystal symmetry operation' 7_555 -x+1/2,y+1/2,-z+1/2 -1.0000000000 0.0000000000 0.0000000000 26.5435000000 0.0000000000 1.0000000000 0.0000000000 35.9230000000 0.0000000000 0.0000000000 -1.0000000000 59.0725000000 8 'crystal symmetry operation' 8_455 x-1/2,-y+1/2,-z+1/2 1.0000000000 0.0000000000 0.0000000000 -26.5435000000 0.0000000000 -1.0000000000 0.0000000000 35.9230000000 0.0000000000 0.0000000000 -1.0000000000 59.0725000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 1 ? G HOH . 2 1 A HOH 62 ? G HOH . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OE2 ? A GLU 71 ? A GLU 240 ? 1_555 NA ? E NA . ? A NA 404 ? 1_555 OD1 ? A ASP 72 ? A ASP 241 ? 1_555 100.8 ? 2 OE2 ? A GLU 71 ? A GLU 240 ? 1_555 NA ? E NA . ? A NA 404 ? 1_555 OD2 ? A ASP 72 ? A ASP 241 ? 1_555 106.5 ? 3 OD1 ? A ASP 72 ? A ASP 241 ? 1_555 NA ? E NA . ? A NA 404 ? 1_555 OD2 ? A ASP 72 ? A ASP 241 ? 1_555 56.4 ? 4 OE2 ? A GLU 71 ? A GLU 240 ? 1_555 NA ? E NA . ? A NA 404 ? 1_555 OE2 ? A GLU 123 ? A GLU 292 ? 3_556 120.4 ? 5 OD1 ? A ASP 72 ? A ASP 241 ? 1_555 NA ? E NA . ? A NA 404 ? 1_555 OE2 ? A GLU 123 ? A GLU 292 ? 3_556 133.9 ? 6 OD2 ? A ASP 72 ? A ASP 241 ? 1_555 NA ? E NA . ? A NA 404 ? 1_555 OE2 ? A GLU 123 ? A GLU 292 ? 3_556 90.4 ? 7 OD1 ? A ASP 135 ? A ASP 304 ? 1_555 ZN ? C ZN . ? A ZN 401 ? 1_555 O ? G HOH . ? A HOH 53 ? 1_555 108.0 ? 8 OD1 ? A ASP 135 ? A ASP 304 ? 1_555 ZN ? C ZN . ? A ZN 401 ? 1_555 O ? G HOH . ? A HOH 93 ? 1_555 94.5 ? 9 O ? G HOH . ? A HOH 53 ? 1_555 ZN ? C ZN . ? A ZN 401 ? 1_555 O ? G HOH . ? A HOH 93 ? 1_555 142.2 ? 10 OD1 ? A ASP 135 ? A ASP 304 ? 1_555 ZN ? C ZN . ? A ZN 401 ? 1_555 NE2 ? A HIS 83 ? A HIS 252 ? 2_565 117.4 ? 11 O ? G HOH . ? A HOH 53 ? 1_555 ZN ? C ZN . ? A ZN 401 ? 1_555 NE2 ? A HIS 83 ? A HIS 252 ? 2_565 110.1 ? 12 O ? G HOH . ? A HOH 93 ? 1_555 ZN ? C ZN . ? A ZN 401 ? 1_555 NE2 ? A HIS 83 ? A HIS 252 ? 2_565 84.0 ? 13 OD1 ? A ASP 144 ? A ASP 313 ? 1_555 ZN ? D ZN . ? A ZN 402 ? 1_555 OE2 ? A GLU 148 ? A GLU 317 ? 1_555 111.9 ? 14 OD1 ? A ASP 144 ? A ASP 313 ? 1_555 ZN ? D ZN . ? A ZN 402 ? 1_555 NE2 ? A HIS 55 ? A HIS 224 ? 8_455 132.9 ? 15 OE2 ? A GLU 148 ? A GLU 317 ? 1_555 ZN ? D ZN . ? A ZN 402 ? 1_555 NE2 ? A HIS 55 ? A HIS 224 ? 8_455 94.7 ? 16 OD1 ? A ASP 144 ? A ASP 313 ? 1_555 ZN ? D ZN . ? A ZN 402 ? 1_555 OE1 ? B GLU 20 ? B GLU 16 ? 8_455 81.2 ? 17 OE2 ? A GLU 148 ? A GLU 317 ? 1_555 ZN ? D ZN . ? A ZN 402 ? 1_555 OE1 ? B GLU 20 ? B GLU 16 ? 8_455 153.8 ? 18 NE2 ? A HIS 55 ? A HIS 224 ? 8_455 ZN ? D ZN . ? A ZN 402 ? 1_555 OE1 ? B GLU 20 ? B GLU 16 ? 8_455 91.7 ? 19 OD1 ? A ASP 144 ? A ASP 313 ? 1_555 ZN ? D ZN . ? A ZN 402 ? 1_555 OE2 ? B GLU 20 ? B GLU 16 ? 8_455 97.1 ? 20 OE2 ? A GLU 148 ? A GLU 317 ? 1_555 ZN ? D ZN . ? A ZN 402 ? 1_555 OE2 ? B GLU 20 ? B GLU 16 ? 8_455 95.9 ? 21 NE2 ? A HIS 55 ? A HIS 224 ? 8_455 ZN ? D ZN . ? A ZN 402 ? 1_555 OE2 ? B GLU 20 ? B GLU 16 ? 8_455 118.8 ? 22 OE1 ? B GLU 20 ? B GLU 16 ? 8_455 ZN ? D ZN . ? A ZN 402 ? 1_555 OE2 ? B GLU 20 ? B GLU 16 ? 8_455 59.0 ? 23 OE1 ? B GLU 13 ? B GLU 9 ? 1_555 ZN ? F ZN . ? B ZN 403 ? 1_555 O ? H HOH . ? B HOH 416 ? 1_555 109.8 ? 24 OE1 ? B GLU 13 ? B GLU 9 ? 1_555 ZN ? F ZN . ? B ZN 403 ? 1_555 O ? H HOH . ? B HOH 421 ? 1_555 103.0 ? 25 O ? H HOH . ? B HOH 416 ? 1_555 ZN ? F ZN . ? B ZN 403 ? 1_555 O ? H HOH . ? B HOH 421 ? 1_555 125.3 ? 26 OE1 ? B GLU 13 ? B GLU 9 ? 1_555 ZN ? F ZN . ? B ZN 403 ? 1_555 NE2 ? A HIS 151 ? A HIS 320 ? 8_555 135.8 ? 27 O ? H HOH . ? B HOH 416 ? 1_555 ZN ? F ZN . ? B ZN 403 ? 1_555 NE2 ? A HIS 151 ? A HIS 320 ? 8_555 98.7 ? 28 O ? H HOH . ? B HOH 421 ? 1_555 ZN ? F ZN . ? B ZN 403 ? 1_555 NE2 ? A HIS 151 ? A HIS 320 ? 8_555 85.9 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-06-19 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2013-04-10 5 'Structure model' 1 4 2017-10-18 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Database references' 5 5 'Structure model' 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 5 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # _diffrn_reflns.diffrn_id 1 _diffrn_reflns.pdbx_d_res_high 2.030 _diffrn_reflns.pdbx_d_res_low 50.000 _diffrn_reflns.pdbx_number_obs 27631 _diffrn_reflns.pdbx_Rmerge_I_obs 0.059 _diffrn_reflns.pdbx_Rsym_value ? _diffrn_reflns.pdbx_chi_squared 1.39 _diffrn_reflns.av_sigmaI_over_netI 15.00 _diffrn_reflns.pdbx_redundancy 7.20 _diffrn_reflns.pdbx_percent_possible_obs 99.60 _diffrn_reflns.number 199904 _diffrn_reflns.pdbx_observed_criterion ? _diffrn_reflns.limit_h_max ? _diffrn_reflns.limit_h_min ? _diffrn_reflns.limit_k_max ? _diffrn_reflns.limit_k_min ? _diffrn_reflns.limit_l_max ? _diffrn_reflns.limit_l_min ? # loop_ _pdbx_diffrn_reflns_shell.diffrn_id _pdbx_diffrn_reflns_shell.d_res_high _pdbx_diffrn_reflns_shell.d_res_low _pdbx_diffrn_reflns_shell.number_obs _pdbx_diffrn_reflns_shell.rejects _pdbx_diffrn_reflns_shell.Rmerge_I_obs _pdbx_diffrn_reflns_shell.Rsym_value _pdbx_diffrn_reflns_shell.chi_squared _pdbx_diffrn_reflns_shell.redundancy _pdbx_diffrn_reflns_shell.percent_possible_obs 1 4.37 50.00 ? ? 0.036 ? 1.579 7.20 98.10 1 3.47 4.37 ? ? 0.047 ? 1.659 7.30 100.00 1 3.03 3.47 ? ? 0.050 ? 1.675 7.50 100.00 1 2.76 3.03 ? ? 0.061 ? 1.508 7.60 100.00 1 2.56 2.76 ? ? 0.084 ? 1.390 7.60 100.00 1 2.41 2.56 ? ? 0.101 ? 1.090 7.70 100.00 1 2.29 2.41 ? ? 0.131 ? 1.013 7.60 100.00 1 2.19 2.29 ? ? 0.248 ? 1.712 7.40 100.00 1 2.10 2.19 ? ? 0.238 ? 0.959 7.10 99.80 1 2.03 2.10 ? ? 0.367 ? 1.247 5.30 97.70 # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.pdbx_refine_id 1 ? refined 2.6389 19.7962 42.9922 -0.0058 -0.0748 -0.0481 0.0086 -0.0092 -0.0023 2.7348 2.0148 1.8823 0.0668 0.2989 0.1883 0.0674 0.0046 -0.0720 -0.1775 -0.3119 -0.0195 0.3838 0.2710 0.0076 'X-RAY DIFFRACTION' 2 ? refined 12.4094 26.0907 35.1058 -0.0964 -0.0551 -0.0317 0.0340 0.0141 -0.0285 4.4472 2.7102 9.1312 -0.1019 1.3696 2.9733 0.0256 0.0493 -0.0749 -0.0446 0.0525 -0.4669 0.1308 0.3355 0.1153 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 A 3 A 152 ALL A 172 A 321 'X-RAY DIFFRACTION' ? 2 2 B 4 B 26 ALL B 0 B 22 'X-RAY DIFFRACTION' ? # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal DENZO . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data reduction' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 1 SCALEPACK . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data scaling' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 2 REFMAC 5.2.0005 ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran_77 ? 3 PDB_EXTRACT 2.000 'April. 3, 2006' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 4 ADSC Quantum ? ? ? ? 'data collection' ? ? ? 5 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 6 HKL-2000 . ? ? ? ? 'data scaling' ? ? ? 7 SHARP . ? ? ? ? phasing ? ? ? 8 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 105 ? ? O B HOH 413 ? ? 2.05 2 1 OD2 A ASP 304 ? ? O A HOH 93 ? ? 2.14 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ASN _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 223 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi 79.89 _pdbx_validate_torsion.psi -24.64 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 197 ? CG ? A LYS 28 CG 2 1 Y 1 A LYS 197 ? CD ? A LYS 28 CD 3 1 Y 1 A LYS 197 ? CE ? A LYS 28 CE 4 1 Y 1 A LYS 197 ? NZ ? A LYS 28 NZ 5 1 Y 1 A ARG 222 ? CG ? A ARG 53 CG 6 1 Y 1 A ARG 222 ? CD ? A ARG 53 CD 7 1 Y 1 A ARG 222 ? NE ? A ARG 53 NE 8 1 Y 1 A ARG 222 ? CZ ? A ARG 53 CZ 9 1 Y 1 A ARG 222 ? NH1 ? A ARG 53 NH1 10 1 Y 1 A ARG 222 ? NH2 ? A ARG 53 NH2 11 1 Y 1 B ARG 1 ? CG ? B ARG 5 CG 12 1 Y 1 B ARG 1 ? CD ? B ARG 5 CD 13 1 Y 1 B ARG 1 ? NE ? B ARG 5 NE 14 1 Y 1 B ARG 1 ? CZ ? B ARG 5 CZ 15 1 Y 1 B ARG 1 ? NH1 ? B ARG 5 NH1 16 1 Y 1 B ARG 1 ? NH2 ? B ARG 5 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 170 ? A GLY 1 2 1 Y 1 A SER 171 ? A SER 2 3 1 Y 1 A PRO 198 ? A PRO 29 4 1 Y 1 A MET 199 ? A MET 30 5 1 Y 1 A GLY 200 ? A GLY 31 6 1 Y 1 A ARG 201 ? A ARG 32 7 1 Y 1 A SER 202 ? A SER 33 8 1 Y 1 A GLU 322 ? A GLU 153 9 1 Y 1 A ASP 323 ? A ASP 154 10 1 Y 1 A LEU 324 ? A LEU 155 11 1 Y 1 A GLU 325 ? A GLU 156 12 1 Y 1 A GLY 326 ? A GLY 157 13 1 Y 1 A GLY 327 ? A GLY 158 14 1 Y 1 B GLY -3 ? B GLY 1 15 1 Y 1 B GLY -2 ? B GLY 2 16 1 Y 1 B SER -1 ? B SER 3 17 1 Y 1 B ARG 23 ? B ARG 27 18 1 Y 1 B ARG 24 ? B ARG 28 19 1 Y 1 B VAL 25 ? B VAL 29 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'ZINC ION' ZN 4 'SODIUM ION' NA 5 water HOH #