data_2PUU # _entry.id 2PUU # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.350 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2PUU pdb_00002puu 10.2210/pdb2puu/pdb RCSB RCSB042796 ? ? WWPDB D_1000042796 ? ? # _pdbx_database_status.entry_id 2PUU _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2007-05-09 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Qian, K.C.' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'A new class of p38 MAP kinase inhibitors based on the pyrazole-naphthyl urea scaffold' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Qian, K.C.' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.length_a 65.908 _cell.length_b 74.722 _cell.length_c 78.245 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 2PUU _cell.pdbx_unique_axis ? _cell.Z_PDB 4 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.entry_id 2PUU _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 19 _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Mitogen-activated protein kinase 14' 39800.586 1 2.7.11.24 ? ? ? 2 non-polymer syn '5-TERT-BUTYL-2-(4-METHYLPHENYL)-3-{[({4-[6-(MORPHOLIN-4-YLMETHYL)PYRIDIN-3-YL]-1-NAPHTHYL}AMINO)CARBONYL]AMINO}-1H-PYRAZOL-2-IUM' 575.723 1 ? ? ? ? 3 water nat water 18.015 31 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Mitogen-activated protein kinase p38 alpha, MAP kinase p38 alpha, CRK1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;RPTFYRQELAKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA ELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYD QSFESRDLLIDEWKSLTYDEVISFVPPP ; _entity_poly.pdbx_seq_one_letter_code_can ;RPTFYRQELAKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA ELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYD QSFESRDLLIDEWKSLTYDEVISFVPPP ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ARG n 1 2 PRO n 1 3 THR n 1 4 PHE n 1 5 TYR n 1 6 ARG n 1 7 GLN n 1 8 GLU n 1 9 LEU n 1 10 ALA n 1 11 LYS n 1 12 THR n 1 13 ILE n 1 14 TRP n 1 15 GLU n 1 16 VAL n 1 17 PRO n 1 18 GLU n 1 19 ARG n 1 20 TYR n 1 21 GLN n 1 22 ASN n 1 23 LEU n 1 24 SER n 1 25 PRO n 1 26 VAL n 1 27 GLY n 1 28 SER n 1 29 GLY n 1 30 ALA n 1 31 TYR n 1 32 GLY n 1 33 SER n 1 34 VAL n 1 35 CYS n 1 36 ALA n 1 37 ALA n 1 38 PHE n 1 39 ASP n 1 40 THR n 1 41 LYS n 1 42 THR n 1 43 GLY n 1 44 HIS n 1 45 ARG n 1 46 VAL n 1 47 ALA n 1 48 VAL n 1 49 LYS n 1 50 LYS n 1 51 LEU n 1 52 SER n 1 53 ARG n 1 54 PRO n 1 55 PHE n 1 56 GLN n 1 57 SER n 1 58 ILE n 1 59 ILE n 1 60 HIS n 1 61 ALA n 1 62 LYS n 1 63 ARG n 1 64 THR n 1 65 TYR n 1 66 ARG n 1 67 GLU n 1 68 LEU n 1 69 ARG n 1 70 LEU n 1 71 LEU n 1 72 LYS n 1 73 HIS n 1 74 MET n 1 75 LYS n 1 76 HIS n 1 77 GLU n 1 78 ASN n 1 79 VAL n 1 80 ILE n 1 81 GLY n 1 82 LEU n 1 83 LEU n 1 84 ASP n 1 85 VAL n 1 86 PHE n 1 87 THR n 1 88 PRO n 1 89 ALA n 1 90 ARG n 1 91 SER n 1 92 LEU n 1 93 GLU n 1 94 GLU n 1 95 PHE n 1 96 ASN n 1 97 ASP n 1 98 VAL n 1 99 TYR n 1 100 LEU n 1 101 VAL n 1 102 THR n 1 103 HIS n 1 104 LEU n 1 105 MET n 1 106 GLY n 1 107 ALA n 1 108 ASP n 1 109 LEU n 1 110 ASN n 1 111 ASN n 1 112 ILE n 1 113 VAL n 1 114 LYS n 1 115 CYS n 1 116 ALA n 1 117 LYS n 1 118 LEU n 1 119 THR n 1 120 ASP n 1 121 ASP n 1 122 HIS n 1 123 VAL n 1 124 GLN n 1 125 PHE n 1 126 LEU n 1 127 ILE n 1 128 TYR n 1 129 GLN n 1 130 ILE n 1 131 LEU n 1 132 ARG n 1 133 GLY n 1 134 LEU n 1 135 LYS n 1 136 TYR n 1 137 ILE n 1 138 HIS n 1 139 SER n 1 140 ALA n 1 141 ASP n 1 142 ILE n 1 143 ILE n 1 144 HIS n 1 145 ARG n 1 146 ASP n 1 147 LEU n 1 148 LYS n 1 149 PRO n 1 150 SER n 1 151 ASN n 1 152 LEU n 1 153 ALA n 1 154 VAL n 1 155 ASN n 1 156 GLU n 1 157 ASP n 1 158 CYS n 1 159 GLU n 1 160 LEU n 1 161 LYS n 1 162 ILE n 1 163 LEU n 1 164 ASP n 1 165 PHE n 1 166 GLY n 1 167 LEU n 1 168 ALA n 1 169 ARG n 1 170 HIS n 1 171 THR n 1 172 ASP n 1 173 ASP n 1 174 GLU n 1 175 MET n 1 176 THR n 1 177 GLY n 1 178 TYR n 1 179 VAL n 1 180 ALA n 1 181 THR n 1 182 ARG n 1 183 TRP n 1 184 TYR n 1 185 ARG n 1 186 ALA n 1 187 PRO n 1 188 GLU n 1 189 ILE n 1 190 MET n 1 191 LEU n 1 192 ASN n 1 193 TRP n 1 194 MET n 1 195 HIS n 1 196 TYR n 1 197 ASN n 1 198 GLN n 1 199 THR n 1 200 VAL n 1 201 ASP n 1 202 ILE n 1 203 TRP n 1 204 SER n 1 205 VAL n 1 206 GLY n 1 207 CYS n 1 208 ILE n 1 209 MET n 1 210 ALA n 1 211 GLU n 1 212 LEU n 1 213 LEU n 1 214 THR n 1 215 GLY n 1 216 ARG n 1 217 THR n 1 218 LEU n 1 219 PHE n 1 220 PRO n 1 221 GLY n 1 222 THR n 1 223 ASP n 1 224 HIS n 1 225 ILE n 1 226 ASP n 1 227 GLN n 1 228 LEU n 1 229 LYS n 1 230 LEU n 1 231 ILE n 1 232 LEU n 1 233 ARG n 1 234 LEU n 1 235 VAL n 1 236 GLY n 1 237 THR n 1 238 PRO n 1 239 GLY n 1 240 ALA n 1 241 GLU n 1 242 LEU n 1 243 LEU n 1 244 LYS n 1 245 LYS n 1 246 ILE n 1 247 SER n 1 248 SER n 1 249 GLU n 1 250 SER n 1 251 ALA n 1 252 ARG n 1 253 ASN n 1 254 TYR n 1 255 ILE n 1 256 GLN n 1 257 SER n 1 258 LEU n 1 259 ALA n 1 260 GLN n 1 261 MET n 1 262 PRO n 1 263 LYS n 1 264 MET n 1 265 ASN n 1 266 PHE n 1 267 ALA n 1 268 ASN n 1 269 VAL n 1 270 PHE n 1 271 ILE n 1 272 GLY n 1 273 ALA n 1 274 ASN n 1 275 PRO n 1 276 LEU n 1 277 ALA n 1 278 VAL n 1 279 ASP n 1 280 LEU n 1 281 LEU n 1 282 GLU n 1 283 LYS n 1 284 MET n 1 285 LEU n 1 286 VAL n 1 287 LEU n 1 288 ASP n 1 289 SER n 1 290 ASP n 1 291 LYS n 1 292 ARG n 1 293 ILE n 1 294 THR n 1 295 ALA n 1 296 ALA n 1 297 GLN n 1 298 ALA n 1 299 LEU n 1 300 ALA n 1 301 HIS n 1 302 ALA n 1 303 TYR n 1 304 PHE n 1 305 ALA n 1 306 GLN n 1 307 TYR n 1 308 HIS n 1 309 ASP n 1 310 PRO n 1 311 ASP n 1 312 ASP n 1 313 GLU n 1 314 PRO n 1 315 VAL n 1 316 ALA n 1 317 ASP n 1 318 PRO n 1 319 TYR n 1 320 ASP n 1 321 GLN n 1 322 SER n 1 323 PHE n 1 324 GLU n 1 325 SER n 1 326 ARG n 1 327 ASP n 1 328 LEU n 1 329 LEU n 1 330 ILE n 1 331 ASP n 1 332 GLU n 1 333 TRP n 1 334 LYS n 1 335 SER n 1 336 LEU n 1 337 THR n 1 338 TYR n 1 339 ASP n 1 340 GLU n 1 341 VAL n 1 342 ILE n 1 343 SER n 1 344 PHE n 1 345 VAL n 1 346 PRO n 1 347 PRO n 1 348 PRO n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name mouse _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'Mapk14, Crk1, Csbp1, Csbp2' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id ? _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code MK14_MOUSE _struct_ref.pdbx_db_accession P47811 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA ELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYD QSFESRDLLIDEWKSLTYDEVISFVPPP ; _struct_ref.pdbx_align_begin 5 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2PUU _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 348 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P47811 _struct_ref_seq.db_align_beg 5 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 352 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 5 _struct_ref_seq.pdbx_auth_seq_align_end 352 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2PUU ALA A 10 ? UNP P47811 ASN 14 'engineered mutation' 14 1 1 2PUU ALA A 116 ? UNP P47811 GLN 120 conflict 120 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 G2G non-polymer . '5-TERT-BUTYL-2-(4-METHYLPHENYL)-3-{[({4-[6-(MORPHOLIN-4-YLMETHYL)PYRIDIN-3-YL]-1-NAPHTHYL}AMINO)CARBONYL]AMINO}-1H-PYRAZOL-2-IUM' ? 'C35 H39 N6 O2 1' 575.723 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 2PUU _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.42 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 49.16 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH ? _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details '10-20 % PEG4000, pH 6.0-8.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RU200' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.54 _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? # _reflns.entry_id 2PUU _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.d_resolution_high 2.5 _reflns.d_resolution_low 50 _reflns.number_all ? _reflns.number_obs 11577 _reflns.percent_possible_obs ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _refine.entry_id 2PUU _refine.ls_d_res_high 2.500 _refine.ls_d_res_low 50.000 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 83.300 _refine.ls_number_reflns_obs 11577 _refine.ls_R_factor_R_work 0.228 _refine.ls_R_factor_R_free 0.318 _refine.ls_percent_reflns_R_free 4.300 _refine.ls_number_reflns_R_free 597 _refine.B_iso_mean 38.133 _refine.aniso_B[1][1] -2.118 _refine.aniso_B[2][2] 9.092 _refine.aniso_B[3][3] -6.974 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.details ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_overall_ESU_R ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2670 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 43 _refine_hist.number_atoms_solvent 31 _refine_hist.number_atoms_total 2744 _refine_hist.d_res_high 2.500 _refine_hist.d_res_low 50.000 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_mcbond_it ? 1.455 1.500 ? 'X-RAY DIFFRACTION' ? c_scbond_it ? 1.880 2.000 ? 'X-RAY DIFFRACTION' ? c_mcangle_it ? 2.516 2.000 ? 'X-RAY DIFFRACTION' ? c_scangle_it ? 2.903 2.500 ? 'X-RAY DIFFRACTION' ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 protein_rep.param ? 'X-RAY DIFFRACTION' 2 birb1017.par ? 'X-RAY DIFFRACTION' 3 water_rep.param ? 'X-RAY DIFFRACTION' # _struct.entry_id 2PUU _struct.title ;Crystal structure of p38 complex with 1-(5-tert-Butyl-2-p-tolyl-2H-pyrazol-3-yl)-3-[4-(6-morpholin-4-ylmethyl-pyridin-3-yl)naphthalen-1-yl]urea ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag N _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2PUU _struct_keywords.pdbx_keywords TRANSFERASE _struct_keywords.text 'p38alpha, MAP kinases, drug discovery, TRANSFERASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 57 ? MET A 74 ? SER A 61 MET A 78 1 ? 18 HELX_P HELX_P2 2 ASN A 110 ? CYS A 115 ? ASN A 114 CYS A 119 1 ? 6 HELX_P HELX_P3 3 THR A 119 ? SER A 139 ? THR A 123 SER A 143 1 ? 21 HELX_P HELX_P4 4 LYS A 148 ? SER A 150 ? LYS A 152 SER A 154 5 ? 3 HELX_P HELX_P5 5 ALA A 180 ? ARG A 185 ? ALA A 184 ARG A 189 1 ? 6 HELX_P HELX_P6 6 ALA A 186 ? ASN A 192 ? ALA A 190 ASN A 196 1 ? 7 HELX_P HELX_P7 7 GLN A 198 ? GLY A 215 ? GLN A 202 GLY A 219 1 ? 18 HELX_P HELX_P8 8 ASP A 223 ? GLY A 236 ? ASP A 227 GLY A 240 1 ? 14 HELX_P HELX_P9 9 GLY A 239 ? LYS A 244 ? GLY A 243 LYS A 248 1 ? 6 HELX_P HELX_P10 10 SER A 248 ? LEU A 258 ? SER A 252 LEU A 262 1 ? 11 HELX_P HELX_P11 11 ASN A 265 ? PHE A 270 ? ASN A 269 PHE A 274 1 ? 6 HELX_P HELX_P12 12 ASN A 274 ? LEU A 285 ? ASN A 278 LEU A 289 1 ? 12 HELX_P HELX_P13 13 THR A 294 ? ALA A 300 ? THR A 298 ALA A 304 1 ? 7 HELX_P HELX_P14 14 HIS A 301 ? ALA A 305 ? HIS A 305 ALA A 309 5 ? 5 HELX_P HELX_P15 15 GLN A 321 ? ARG A 326 ? GLN A 325 ARG A 330 5 ? 6 HELX_P HELX_P16 16 LEU A 329 ? SER A 343 ? LEU A 333 SER A 347 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 2 ? C ? 5 ? D ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel C 4 5 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 PHE A 4 ? TYR A 5 ? PHE A 8 TYR A 9 A 2 VAL A 16 ? PRO A 17 ? VAL A 20 PRO A 21 B 1 GLU A 8 ? LEU A 9 ? GLU A 12 LEU A 13 B 2 THR A 12 ? ILE A 13 ? THR A 16 ILE A 17 C 1 TYR A 20 ? PRO A 25 ? TYR A 24 PRO A 29 C 2 VAL A 34 ? ASP A 39 ? VAL A 38 ASP A 43 C 3 HIS A 44 ? LYS A 50 ? HIS A 48 LYS A 54 C 4 TYR A 99 ? HIS A 103 ? TYR A 103 HIS A 107 C 5 ASP A 84 ? PHE A 86 ? ASP A 88 PHE A 90 D 1 ALA A 107 ? ASP A 108 ? ALA A 111 ASP A 112 D 2 LEU A 152 ? VAL A 154 ? LEU A 156 VAL A 158 D 3 LEU A 160 ? ILE A 162 ? LEU A 164 ILE A 166 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N TYR A 5 ? N TYR A 9 O VAL A 16 ? O VAL A 20 B 1 2 N LEU A 9 ? N LEU A 13 O THR A 12 ? O THR A 16 C 1 2 N GLN A 21 ? N GLN A 25 O PHE A 38 ? O PHE A 42 C 2 3 N CYS A 35 ? N CYS A 39 O VAL A 48 ? O VAL A 52 C 3 4 N ALA A 47 ? N ALA A 51 O THR A 102 ? O THR A 106 C 4 5 O VAL A 101 ? O VAL A 105 N ASP A 84 ? N ASP A 88 D 1 2 N ALA A 107 ? N ALA A 111 O VAL A 154 ? O VAL A 158 D 2 3 N ALA A 153 ? N ALA A 157 O LYS A 161 ? O LYS A 165 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id G2G _struct_site.pdbx_auth_seq_id 391 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 14 _struct_site.details 'BINDING SITE FOR RESIDUE G2G A 391' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 14 ARG A 63 ? ARG A 67 . ? 1_555 ? 2 AC1 14 GLU A 67 ? GLU A 71 . ? 1_555 ? 3 AC1 14 LEU A 70 ? LEU A 74 . ? 1_555 ? 4 AC1 14 MET A 74 ? MET A 78 . ? 1_555 ? 5 AC1 14 ILE A 80 ? ILE A 84 . ? 1_555 ? 6 AC1 14 LEU A 100 ? LEU A 104 . ? 1_555 ? 7 AC1 14 THR A 102 ? THR A 106 . ? 1_555 ? 8 AC1 14 MET A 105 ? MET A 109 . ? 1_555 ? 9 AC1 14 GLY A 106 ? GLY A 110 . ? 1_555 ? 10 AC1 14 ALA A 107 ? ALA A 111 . ? 1_555 ? 11 AC1 14 LEU A 163 ? LEU A 167 . ? 1_555 ? 12 AC1 14 ASP A 164 ? ASP A 168 . ? 1_555 ? 13 AC1 14 PHE A 165 ? PHE A 169 . ? 1_555 ? 14 AC1 14 HOH C . ? HOH A 393 . ? 1_555 ? # _atom_sites.entry_id 2PUU _atom_sites.fract_transf_matrix[1][1] 0.015173 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013383 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012780 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ARG 1 5 5 ARG ARG A . n A 1 2 PRO 2 6 6 PRO PRO A . n A 1 3 THR 3 7 7 THR THR A . n A 1 4 PHE 4 8 8 PHE PHE A . n A 1 5 TYR 5 9 9 TYR TYR A . n A 1 6 ARG 6 10 10 ARG ARG A . n A 1 7 GLN 7 11 11 GLN GLN A . n A 1 8 GLU 8 12 12 GLU GLU A . n A 1 9 LEU 9 13 13 LEU LEU A . n A 1 10 ALA 10 14 14 ALA ALA A . n A 1 11 LYS 11 15 15 LYS LYS A . n A 1 12 THR 12 16 16 THR THR A . n A 1 13 ILE 13 17 17 ILE ILE A . n A 1 14 TRP 14 18 18 TRP TRP A . n A 1 15 GLU 15 19 19 GLU GLU A . n A 1 16 VAL 16 20 20 VAL VAL A . n A 1 17 PRO 17 21 21 PRO PRO A . n A 1 18 GLU 18 22 22 GLU GLU A . n A 1 19 ARG 19 23 23 ARG ARG A . n A 1 20 TYR 20 24 24 TYR TYR A . n A 1 21 GLN 21 25 25 GLN GLN A . n A 1 22 ASN 22 26 26 ASN ASN A . n A 1 23 LEU 23 27 27 LEU LEU A . n A 1 24 SER 24 28 28 SER SER A . n A 1 25 PRO 25 29 29 PRO PRO A . n A 1 26 VAL 26 30 30 VAL VAL A . n A 1 27 GLY 27 31 ? ? ? A . n A 1 28 SER 28 32 ? ? ? A . n A 1 29 GLY 29 33 ? ? ? A . n A 1 30 ALA 30 34 ? ? ? A . n A 1 31 TYR 31 35 ? ? ? A . n A 1 32 GLY 32 36 ? ? ? A . n A 1 33 SER 33 37 37 SER SER A . n A 1 34 VAL 34 38 38 VAL VAL A . n A 1 35 CYS 35 39 39 CYS CYS A . n A 1 36 ALA 36 40 40 ALA ALA A . n A 1 37 ALA 37 41 41 ALA ALA A . n A 1 38 PHE 38 42 42 PHE PHE A . n A 1 39 ASP 39 43 43 ASP ASP A . n A 1 40 THR 40 44 44 THR THR A . n A 1 41 LYS 41 45 45 LYS LYS A . n A 1 42 THR 42 46 46 THR THR A . n A 1 43 GLY 43 47 47 GLY GLY A . n A 1 44 HIS 44 48 48 HIS HIS A . n A 1 45 ARG 45 49 49 ARG ARG A . n A 1 46 VAL 46 50 50 VAL VAL A . n A 1 47 ALA 47 51 51 ALA ALA A . n A 1 48 VAL 48 52 52 VAL VAL A . n A 1 49 LYS 49 53 53 LYS LYS A . n A 1 50 LYS 50 54 54 LYS LYS A . n A 1 51 LEU 51 55 55 LEU LEU A . n A 1 52 SER 52 56 56 SER SER A . n A 1 53 ARG 53 57 57 ARG ARG A . n A 1 54 PRO 54 58 58 PRO PRO A . n A 1 55 PHE 55 59 59 PHE PHE A . n A 1 56 GLN 56 60 60 GLN GLN A . n A 1 57 SER 57 61 61 SER SER A . n A 1 58 ILE 58 62 62 ILE ILE A . n A 1 59 ILE 59 63 63 ILE ILE A . n A 1 60 HIS 60 64 64 HIS HIS A . n A 1 61 ALA 61 65 65 ALA ALA A . n A 1 62 LYS 62 66 66 LYS LYS A . n A 1 63 ARG 63 67 67 ARG ARG A . n A 1 64 THR 64 68 68 THR THR A . n A 1 65 TYR 65 69 69 TYR TYR A . n A 1 66 ARG 66 70 70 ARG ARG A . n A 1 67 GLU 67 71 71 GLU GLU A . n A 1 68 LEU 68 72 72 LEU LEU A . n A 1 69 ARG 69 73 73 ARG ARG A . n A 1 70 LEU 70 74 74 LEU LEU A . n A 1 71 LEU 71 75 75 LEU LEU A . n A 1 72 LYS 72 76 76 LYS LYS A . n A 1 73 HIS 73 77 77 HIS HIS A . n A 1 74 MET 74 78 78 MET MET A . n A 1 75 LYS 75 79 79 LYS LYS A . n A 1 76 HIS 76 80 80 HIS HIS A . n A 1 77 GLU 77 81 81 GLU GLU A . n A 1 78 ASN 78 82 82 ASN ASN A . n A 1 79 VAL 79 83 83 VAL VAL A . n A 1 80 ILE 80 84 84 ILE ILE A . n A 1 81 GLY 81 85 85 GLY GLY A . n A 1 82 LEU 82 86 86 LEU LEU A . n A 1 83 LEU 83 87 87 LEU LEU A . n A 1 84 ASP 84 88 88 ASP ASP A . n A 1 85 VAL 85 89 89 VAL VAL A . n A 1 86 PHE 86 90 90 PHE PHE A . n A 1 87 THR 87 91 91 THR THR A . n A 1 88 PRO 88 92 92 PRO PRO A . n A 1 89 ALA 89 93 93 ALA ALA A . n A 1 90 ARG 90 94 94 ARG ARG A . n A 1 91 SER 91 95 95 SER SER A . n A 1 92 LEU 92 96 96 LEU LEU A . n A 1 93 GLU 93 97 97 GLU GLU A . n A 1 94 GLU 94 98 98 GLU GLU A . n A 1 95 PHE 95 99 99 PHE PHE A . n A 1 96 ASN 96 100 100 ASN ASN A . n A 1 97 ASP 97 101 101 ASP ASP A . n A 1 98 VAL 98 102 102 VAL VAL A . n A 1 99 TYR 99 103 103 TYR TYR A . n A 1 100 LEU 100 104 104 LEU LEU A . n A 1 101 VAL 101 105 105 VAL VAL A . n A 1 102 THR 102 106 106 THR THR A . n A 1 103 HIS 103 107 107 HIS HIS A . n A 1 104 LEU 104 108 108 LEU LEU A . n A 1 105 MET 105 109 109 MET MET A . n A 1 106 GLY 106 110 110 GLY GLY A . n A 1 107 ALA 107 111 111 ALA ALA A . n A 1 108 ASP 108 112 112 ASP ASP A . n A 1 109 LEU 109 113 113 LEU LEU A . n A 1 110 ASN 110 114 114 ASN ASN A . n A 1 111 ASN 111 115 115 ASN ASN A . n A 1 112 ILE 112 116 116 ILE ILE A . n A 1 113 VAL 113 117 117 VAL VAL A . n A 1 114 LYS 114 118 118 LYS LYS A . n A 1 115 CYS 115 119 119 CYS CYS A . n A 1 116 ALA 116 120 120 ALA ALA A . n A 1 117 LYS 117 121 121 LYS LYS A . n A 1 118 LEU 118 122 122 LEU LEU A . n A 1 119 THR 119 123 123 THR THR A . n A 1 120 ASP 120 124 124 ASP ASP A . n A 1 121 ASP 121 125 125 ASP ASP A . n A 1 122 HIS 122 126 126 HIS HIS A . n A 1 123 VAL 123 127 127 VAL VAL A . n A 1 124 GLN 124 128 128 GLN GLN A . n A 1 125 PHE 125 129 129 PHE PHE A . n A 1 126 LEU 126 130 130 LEU LEU A . n A 1 127 ILE 127 131 131 ILE ILE A . n A 1 128 TYR 128 132 132 TYR TYR A . n A 1 129 GLN 129 133 133 GLN GLN A . n A 1 130 ILE 130 134 134 ILE ILE A . n A 1 131 LEU 131 135 135 LEU LEU A . n A 1 132 ARG 132 136 136 ARG ARG A . n A 1 133 GLY 133 137 137 GLY GLY A . n A 1 134 LEU 134 138 138 LEU LEU A . n A 1 135 LYS 135 139 139 LYS LYS A . n A 1 136 TYR 136 140 140 TYR TYR A . n A 1 137 ILE 137 141 141 ILE ILE A . n A 1 138 HIS 138 142 142 HIS HIS A . n A 1 139 SER 139 143 143 SER SER A . n A 1 140 ALA 140 144 144 ALA ALA A . n A 1 141 ASP 141 145 145 ASP ASP A . n A 1 142 ILE 142 146 146 ILE ILE A . n A 1 143 ILE 143 147 147 ILE ILE A . n A 1 144 HIS 144 148 148 HIS HIS A . n A 1 145 ARG 145 149 149 ARG ARG A . n A 1 146 ASP 146 150 150 ASP ASP A . n A 1 147 LEU 147 151 151 LEU LEU A . n A 1 148 LYS 148 152 152 LYS LYS A . n A 1 149 PRO 149 153 153 PRO PRO A . n A 1 150 SER 150 154 154 SER SER A . n A 1 151 ASN 151 155 155 ASN ASN A . n A 1 152 LEU 152 156 156 LEU LEU A . n A 1 153 ALA 153 157 157 ALA ALA A . n A 1 154 VAL 154 158 158 VAL VAL A . n A 1 155 ASN 155 159 159 ASN ASN A . n A 1 156 GLU 156 160 160 GLU GLU A . n A 1 157 ASP 157 161 161 ASP ASP A . n A 1 158 CYS 158 162 162 CYS CYS A . n A 1 159 GLU 159 163 163 GLU GLU A . n A 1 160 LEU 160 164 164 LEU LEU A . n A 1 161 LYS 161 165 165 LYS LYS A . n A 1 162 ILE 162 166 166 ILE ILE A . n A 1 163 LEU 163 167 167 LEU LEU A . n A 1 164 ASP 164 168 168 ASP ASP A . n A 1 165 PHE 165 169 169 PHE PHE A . n A 1 166 GLY 166 170 170 GLY GLY A . n A 1 167 LEU 167 171 ? ? ? A . n A 1 168 ALA 168 172 ? ? ? A . n A 1 169 ARG 169 173 ? ? ? A . n A 1 170 HIS 170 174 ? ? ? A . n A 1 171 THR 171 175 ? ? ? A . n A 1 172 ASP 172 176 ? ? ? A . n A 1 173 ASP 173 177 ? ? ? A . n A 1 174 GLU 174 178 ? ? ? A . n A 1 175 MET 175 179 ? ? ? A . n A 1 176 THR 176 180 ? ? ? A . n A 1 177 GLY 177 181 ? ? ? A . n A 1 178 TYR 178 182 ? ? ? A . n A 1 179 VAL 179 183 183 VAL VAL A . n A 1 180 ALA 180 184 184 ALA ALA A . n A 1 181 THR 181 185 185 THR THR A . n A 1 182 ARG 182 186 186 ARG ARG A . n A 1 183 TRP 183 187 187 TRP TRP A . n A 1 184 TYR 184 188 188 TYR TYR A . n A 1 185 ARG 185 189 189 ARG ARG A . n A 1 186 ALA 186 190 190 ALA ALA A . n A 1 187 PRO 187 191 191 PRO PRO A . n A 1 188 GLU 188 192 192 GLU GLU A . n A 1 189 ILE 189 193 193 ILE ILE A . n A 1 190 MET 190 194 194 MET MET A . n A 1 191 LEU 191 195 195 LEU LEU A . n A 1 192 ASN 192 196 196 ASN ASN A . n A 1 193 TRP 193 197 197 TRP TRP A . n A 1 194 MET 194 198 198 MET MET A . n A 1 195 HIS 195 199 199 HIS HIS A . n A 1 196 TYR 196 200 200 TYR TYR A . n A 1 197 ASN 197 201 201 ASN ASN A . n A 1 198 GLN 198 202 202 GLN GLN A . n A 1 199 THR 199 203 203 THR THR A . n A 1 200 VAL 200 204 204 VAL VAL A . n A 1 201 ASP 201 205 205 ASP ASP A . n A 1 202 ILE 202 206 206 ILE ILE A . n A 1 203 TRP 203 207 207 TRP TRP A . n A 1 204 SER 204 208 208 SER SER A . n A 1 205 VAL 205 209 209 VAL VAL A . n A 1 206 GLY 206 210 210 GLY GLY A . n A 1 207 CYS 207 211 211 CYS CYS A . n A 1 208 ILE 208 212 212 ILE ILE A . n A 1 209 MET 209 213 213 MET MET A . n A 1 210 ALA 210 214 214 ALA ALA A . n A 1 211 GLU 211 215 215 GLU GLU A . n A 1 212 LEU 212 216 216 LEU LEU A . n A 1 213 LEU 213 217 217 LEU LEU A . n A 1 214 THR 214 218 218 THR THR A . n A 1 215 GLY 215 219 219 GLY GLY A . n A 1 216 ARG 216 220 220 ARG ARG A . n A 1 217 THR 217 221 221 THR THR A . n A 1 218 LEU 218 222 222 LEU LEU A . n A 1 219 PHE 219 223 223 PHE PHE A . n A 1 220 PRO 220 224 224 PRO PRO A . n A 1 221 GLY 221 225 225 GLY GLY A . n A 1 222 THR 222 226 226 THR THR A . n A 1 223 ASP 223 227 227 ASP ASP A . n A 1 224 HIS 224 228 228 HIS HIS A . n A 1 225 ILE 225 229 229 ILE ILE A . n A 1 226 ASP 226 230 230 ASP ASP A . n A 1 227 GLN 227 231 231 GLN GLN A . n A 1 228 LEU 228 232 232 LEU LEU A . n A 1 229 LYS 229 233 233 LYS LYS A . n A 1 230 LEU 230 234 234 LEU LEU A . n A 1 231 ILE 231 235 235 ILE ILE A . n A 1 232 LEU 232 236 236 LEU LEU A . n A 1 233 ARG 233 237 237 ARG ARG A . n A 1 234 LEU 234 238 238 LEU LEU A . n A 1 235 VAL 235 239 239 VAL VAL A . n A 1 236 GLY 236 240 240 GLY GLY A . n A 1 237 THR 237 241 241 THR THR A . n A 1 238 PRO 238 242 242 PRO PRO A . n A 1 239 GLY 239 243 243 GLY GLY A . n A 1 240 ALA 240 244 244 ALA ALA A . n A 1 241 GLU 241 245 245 GLU GLU A . n A 1 242 LEU 242 246 246 LEU LEU A . n A 1 243 LEU 243 247 247 LEU LEU A . n A 1 244 LYS 244 248 248 LYS LYS A . n A 1 245 LYS 245 249 249 LYS LYS A . n A 1 246 ILE 246 250 250 ILE ILE A . n A 1 247 SER 247 251 251 SER SER A . n A 1 248 SER 248 252 252 SER SER A . n A 1 249 GLU 249 253 253 GLU GLU A . n A 1 250 SER 250 254 254 SER SER A . n A 1 251 ALA 251 255 255 ALA ALA A . n A 1 252 ARG 252 256 256 ARG ARG A . n A 1 253 ASN 253 257 257 ASN ASN A . n A 1 254 TYR 254 258 258 TYR TYR A . n A 1 255 ILE 255 259 259 ILE ILE A . n A 1 256 GLN 256 260 260 GLN GLN A . n A 1 257 SER 257 261 261 SER SER A . n A 1 258 LEU 258 262 262 LEU LEU A . n A 1 259 ALA 259 263 263 ALA ALA A . n A 1 260 GLN 260 264 264 GLN GLN A . n A 1 261 MET 261 265 265 MET MET A . n A 1 262 PRO 262 266 266 PRO PRO A . n A 1 263 LYS 263 267 267 LYS LYS A . n A 1 264 MET 264 268 268 MET MET A . n A 1 265 ASN 265 269 269 ASN ASN A . n A 1 266 PHE 266 270 270 PHE PHE A . n A 1 267 ALA 267 271 271 ALA ALA A . n A 1 268 ASN 268 272 272 ASN ASN A . n A 1 269 VAL 269 273 273 VAL VAL A . n A 1 270 PHE 270 274 274 PHE PHE A . n A 1 271 ILE 271 275 275 ILE ILE A . n A 1 272 GLY 272 276 276 GLY GLY A . n A 1 273 ALA 273 277 277 ALA ALA A . n A 1 274 ASN 274 278 278 ASN ASN A . n A 1 275 PRO 275 279 279 PRO PRO A . n A 1 276 LEU 276 280 280 LEU LEU A . n A 1 277 ALA 277 281 281 ALA ALA A . n A 1 278 VAL 278 282 282 VAL VAL A . n A 1 279 ASP 279 283 283 ASP ASP A . n A 1 280 LEU 280 284 284 LEU LEU A . n A 1 281 LEU 281 285 285 LEU LEU A . n A 1 282 GLU 282 286 286 GLU GLU A . n A 1 283 LYS 283 287 287 LYS LYS A . n A 1 284 MET 284 288 288 MET MET A . n A 1 285 LEU 285 289 289 LEU LEU A . n A 1 286 VAL 286 290 290 VAL VAL A . n A 1 287 LEU 287 291 291 LEU LEU A . n A 1 288 ASP 288 292 292 ASP ASP A . n A 1 289 SER 289 293 293 SER SER A . n A 1 290 ASP 290 294 294 ASP ASP A . n A 1 291 LYS 291 295 295 LYS LYS A . n A 1 292 ARG 292 296 296 ARG ARG A . n A 1 293 ILE 293 297 297 ILE ILE A . n A 1 294 THR 294 298 298 THR THR A . n A 1 295 ALA 295 299 299 ALA ALA A . n A 1 296 ALA 296 300 300 ALA ALA A . n A 1 297 GLN 297 301 301 GLN GLN A . n A 1 298 ALA 298 302 302 ALA ALA A . n A 1 299 LEU 299 303 303 LEU LEU A . n A 1 300 ALA 300 304 304 ALA ALA A . n A 1 301 HIS 301 305 305 HIS HIS A . n A 1 302 ALA 302 306 306 ALA ALA A . n A 1 303 TYR 303 307 307 TYR TYR A . n A 1 304 PHE 304 308 308 PHE PHE A . n A 1 305 ALA 305 309 309 ALA ALA A . n A 1 306 GLN 306 310 310 GLN GLN A . n A 1 307 TYR 307 311 311 TYR TYR A . n A 1 308 HIS 308 312 312 HIS HIS A . n A 1 309 ASP 309 313 313 ASP ASP A . n A 1 310 PRO 310 314 314 PRO PRO A . n A 1 311 ASP 311 315 315 ASP ASP A . n A 1 312 ASP 312 316 316 ASP ASP A . n A 1 313 GLU 313 317 317 GLU GLU A . n A 1 314 PRO 314 318 318 PRO PRO A . n A 1 315 VAL 315 319 319 VAL VAL A . n A 1 316 ALA 316 320 320 ALA ALA A . n A 1 317 ASP 317 321 321 ASP ASP A . n A 1 318 PRO 318 322 322 PRO PRO A . n A 1 319 TYR 319 323 323 TYR TYR A . n A 1 320 ASP 320 324 324 ASP ASP A . n A 1 321 GLN 321 325 325 GLN GLN A . n A 1 322 SER 322 326 326 SER SER A . n A 1 323 PHE 323 327 327 PHE PHE A . n A 1 324 GLU 324 328 328 GLU GLU A . n A 1 325 SER 325 329 329 SER SER A . n A 1 326 ARG 326 330 330 ARG ARG A . n A 1 327 ASP 327 331 331 ASP ASP A . n A 1 328 LEU 328 332 332 LEU LEU A . n A 1 329 LEU 329 333 333 LEU LEU A . n A 1 330 ILE 330 334 334 ILE ILE A . n A 1 331 ASP 331 335 335 ASP ASP A . n A 1 332 GLU 332 336 336 GLU GLU A . n A 1 333 TRP 333 337 337 TRP TRP A . n A 1 334 LYS 334 338 338 LYS LYS A . n A 1 335 SER 335 339 339 SER SER A . n A 1 336 LEU 336 340 340 LEU LEU A . n A 1 337 THR 337 341 341 THR THR A . n A 1 338 TYR 338 342 342 TYR TYR A . n A 1 339 ASP 339 343 343 ASP ASP A . n A 1 340 GLU 340 344 344 GLU GLU A . n A 1 341 VAL 341 345 345 VAL VAL A . n A 1 342 ILE 342 346 346 ILE ILE A . n A 1 343 SER 343 347 347 SER SER A . n A 1 344 PHE 344 348 348 PHE PHE A . n A 1 345 VAL 345 349 349 VAL VAL A . n A 1 346 PRO 346 350 350 PRO PRO A . n A 1 347 PRO 347 351 351 PRO PRO A . n A 1 348 PRO 348 352 352 PRO PRO A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 G2G 1 391 391 G2G G2G A . C 3 HOH 1 392 1 HOH TIP A . C 3 HOH 2 393 2 HOH TIP A . C 3 HOH 3 394 3 HOH TIP A . C 3 HOH 4 395 4 HOH TIP A . C 3 HOH 5 396 5 HOH TIP A . C 3 HOH 6 397 6 HOH TIP A . C 3 HOH 7 398 7 HOH TIP A . C 3 HOH 8 399 8 HOH TIP A . C 3 HOH 9 400 9 HOH TIP A . C 3 HOH 10 401 10 HOH TIP A . C 3 HOH 11 402 11 HOH TIP A . C 3 HOH 12 403 12 HOH TIP A . C 3 HOH 13 404 13 HOH TIP A . C 3 HOH 14 405 14 HOH TIP A . C 3 HOH 15 406 15 HOH TIP A . C 3 HOH 16 407 16 HOH TIP A . C 3 HOH 17 408 17 HOH TIP A . C 3 HOH 18 409 18 HOH TIP A . C 3 HOH 19 410 19 HOH TIP A . C 3 HOH 20 411 20 HOH TIP A . C 3 HOH 21 412 21 HOH TIP A . C 3 HOH 22 413 22 HOH TIP A . C 3 HOH 23 414 23 HOH TIP A . C 3 HOH 24 415 24 HOH TIP A . C 3 HOH 25 416 25 HOH TIP A . C 3 HOH 26 417 26 HOH TIP A . C 3 HOH 27 418 27 HOH TIP A . C 3 HOH 28 419 28 HOH TIP A . C 3 HOH 29 420 29 HOH TIP A . C 3 HOH 30 421 30 HOH TIP A . C 3 HOH 31 422 31 HOH TIP A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-05-20 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2018-04-04 4 'Structure model' 1 3 2021-10-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' diffrn_source 2 4 'Structure model' database_2 3 4 'Structure model' struct_ref_seq_dif 4 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_diffrn_source.type' 2 4 'Structure model' '_database_2.pdbx_DOI' 3 4 'Structure model' '_database_2.pdbx_database_accession' 4 4 'Structure model' '_struct_ref_seq_dif.details' 5 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 6 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 7 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal CNS . ? package 'Axel T. Brunger' axel.brunger@yale.edu refinement http://cns.csb.yale.edu/v1.1/ Fortran_77 ? 1 PDB_EXTRACT 2.000 'April. 3, 2006' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 2 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 6 ? ? -70.24 -149.29 2 1 GLN A 11 ? ? 177.90 147.08 3 1 ALA A 14 ? ? 39.77 66.00 4 1 LYS A 15 ? ? 72.04 -36.41 5 1 PRO A 29 ? ? -48.38 153.65 6 1 SER A 56 ? ? -40.87 -97.03 7 1 ARG A 57 ? ? -117.13 71.90 8 1 ASN A 114 ? ? -69.64 -72.73 9 1 ILE A 116 ? ? -58.53 -0.57 10 1 ALA A 120 ? ? -171.57 -142.20 11 1 LEU A 122 ? ? 82.01 134.16 12 1 ARG A 149 ? ? 75.33 -3.68 13 1 ASP A 150 ? ? -145.66 41.87 14 1 ASN A 196 ? ? 67.12 115.30 15 1 MET A 198 ? ? 59.96 -7.47 16 1 TYR A 200 ? ? -104.00 -145.38 17 1 ASN A 201 ? ? -171.17 -174.74 18 1 SER A 261 ? ? -95.17 -70.93 19 1 LEU A 262 ? ? -66.40 43.90 20 1 ALA A 263 ? ? -78.26 30.30 21 1 MET A 265 ? ? -164.21 97.35 22 1 PRO A 266 ? ? -48.32 86.55 23 1 LYS A 267 ? ? -54.60 -175.17 24 1 PHE A 270 ? ? -22.98 -47.28 25 1 PHE A 274 ? ? -119.90 58.79 26 1 LEU A 289 ? ? -93.98 58.21 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 31 ? A GLY 27 2 1 Y 1 A SER 32 ? A SER 28 3 1 Y 1 A GLY 33 ? A GLY 29 4 1 Y 1 A ALA 34 ? A ALA 30 5 1 Y 1 A TYR 35 ? A TYR 31 6 1 Y 1 A GLY 36 ? A GLY 32 7 1 Y 1 A LEU 171 ? A LEU 167 8 1 Y 1 A ALA 172 ? A ALA 168 9 1 Y 1 A ARG 173 ? A ARG 169 10 1 Y 1 A HIS 174 ? A HIS 170 11 1 Y 1 A THR 175 ? A THR 171 12 1 Y 1 A ASP 176 ? A ASP 172 13 1 Y 1 A ASP 177 ? A ASP 173 14 1 Y 1 A GLU 178 ? A GLU 174 15 1 Y 1 A MET 179 ? A MET 175 16 1 Y 1 A THR 180 ? A THR 176 17 1 Y 1 A GLY 181 ? A GLY 177 18 1 Y 1 A TYR 182 ? A TYR 178 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '5-TERT-BUTYL-2-(4-METHYLPHENYL)-3-{[({4-[6-(MORPHOLIN-4-YLMETHYL)PYRIDIN-3-YL]-1-NAPHTHYL}AMINO)CARBONYL]AMINO}-1H-PYRAZOL-2-IUM' G2G 3 water HOH #