data_2PWX # _entry.id 2PWX # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2PWX RCSB RCSB042868 WWPDB D_1000042868 # _pdbx_database_status.entry_id 2PWX _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2007-05-14 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Chen, S.' 1 'Hu, T.' 2 'Jiang, H.' 3 'Shen, X.' 4 # _citation.id primary _citation.title ;Mutation of Gly-11 on the dimer interface results in the complete crystallographic dimer dissociation of severe acute respiratory syndrome coronavirus 3C-like protease: crystal structure with molecular dynamics simulations. ; _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 283 _citation.page_first 554 _citation.page_last 564 _citation.year 2008 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17977841 _citation.pdbx_database_id_DOI 10.1074/jbc.M705240200 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Chen, S.' 1 primary 'Hu, T.' 2 primary 'Zhang, J.' 3 primary 'Chen, J.' 4 primary 'Chen, K.' 5 primary 'Ding, J.' 6 primary 'Jiang, H.' 7 primary 'Shen, X.' 8 # _cell.length_a 34.147 _cell.length_b 66.052 _cell.length_c 129.030 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 2PWX _cell.pdbx_unique_axis ? _cell.Z_PDB 4 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.entry_id 2PWX _symmetry.Int_Tables_number 19 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man '3C-like proteinase' 34034.789 1 3.4.22.- G3251A '3C-like proteinase domain' ? 2 water nat water 18.015 83 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name '3CL-PRO, 3CLp, nsp5' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSGFRKMAFPSAKVEGCMVQVTCGTTTLNGLWLDDTVYCPRHVICTAEDMLNPNYEDLLIRKSNHSFLVQAGNVQLRVI GHSMQNCLLRLKVDTSNPKTPKYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNHTIKGSFLNGSCGSVGFNIDYDCVS FCYMHHMELPTGVHAGTDLEGKFYGPFVDRQTAQAAGTDTTITLNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYN YEPLTQDHVDILGPLSAQTGIAVLDMCAALKELLQNGMNGRTILGSTILEDEFTPFDVVRQCSGVTFQ ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSGFRKMAFPSAKVEGCMVQVTCGTTTLNGLWLDDTVYCPRHVICTAEDMLNPNYEDLLIRKSNHSFLVQAGNVQLRVI GHSMQNCLLRLKVDTSNPKTPKYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNHTIKGSFLNGSCGSVGFNIDYDCVS FCYMHHMELPTGVHAGTDLEGKFYGPFVDRQTAQAAGTDTTITLNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYN YEPLTQDHVDILGPLSAQTGIAVLDMCAALKELLQNGMNGRTILGSTILEDEFTPFDVVRQCSGVTFQ ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 PHE n 1 6 ARG n 1 7 LYS n 1 8 MET n 1 9 ALA n 1 10 PHE n 1 11 PRO n 1 12 SER n 1 13 ALA n 1 14 LYS n 1 15 VAL n 1 16 GLU n 1 17 GLY n 1 18 CYS n 1 19 MET n 1 20 VAL n 1 21 GLN n 1 22 VAL n 1 23 THR n 1 24 CYS n 1 25 GLY n 1 26 THR n 1 27 THR n 1 28 THR n 1 29 LEU n 1 30 ASN n 1 31 GLY n 1 32 LEU n 1 33 TRP n 1 34 LEU n 1 35 ASP n 1 36 ASP n 1 37 THR n 1 38 VAL n 1 39 TYR n 1 40 CYS n 1 41 PRO n 1 42 ARG n 1 43 HIS n 1 44 VAL n 1 45 ILE n 1 46 CYS n 1 47 THR n 1 48 ALA n 1 49 GLU n 1 50 ASP n 1 51 MET n 1 52 LEU n 1 53 ASN n 1 54 PRO n 1 55 ASN n 1 56 TYR n 1 57 GLU n 1 58 ASP n 1 59 LEU n 1 60 LEU n 1 61 ILE n 1 62 ARG n 1 63 LYS n 1 64 SER n 1 65 ASN n 1 66 HIS n 1 67 SER n 1 68 PHE n 1 69 LEU n 1 70 VAL n 1 71 GLN n 1 72 ALA n 1 73 GLY n 1 74 ASN n 1 75 VAL n 1 76 GLN n 1 77 LEU n 1 78 ARG n 1 79 VAL n 1 80 ILE n 1 81 GLY n 1 82 HIS n 1 83 SER n 1 84 MET n 1 85 GLN n 1 86 ASN n 1 87 CYS n 1 88 LEU n 1 89 LEU n 1 90 ARG n 1 91 LEU n 1 92 LYS n 1 93 VAL n 1 94 ASP n 1 95 THR n 1 96 SER n 1 97 ASN n 1 98 PRO n 1 99 LYS n 1 100 THR n 1 101 PRO n 1 102 LYS n 1 103 TYR n 1 104 LYS n 1 105 PHE n 1 106 VAL n 1 107 ARG n 1 108 ILE n 1 109 GLN n 1 110 PRO n 1 111 GLY n 1 112 GLN n 1 113 THR n 1 114 PHE n 1 115 SER n 1 116 VAL n 1 117 LEU n 1 118 ALA n 1 119 CYS n 1 120 TYR n 1 121 ASN n 1 122 GLY n 1 123 SER n 1 124 PRO n 1 125 SER n 1 126 GLY n 1 127 VAL n 1 128 TYR n 1 129 GLN n 1 130 CYS n 1 131 ALA n 1 132 MET n 1 133 ARG n 1 134 PRO n 1 135 ASN n 1 136 HIS n 1 137 THR n 1 138 ILE n 1 139 LYS n 1 140 GLY n 1 141 SER n 1 142 PHE n 1 143 LEU n 1 144 ASN n 1 145 GLY n 1 146 SER n 1 147 CYS n 1 148 GLY n 1 149 SER n 1 150 VAL n 1 151 GLY n 1 152 PHE n 1 153 ASN n 1 154 ILE n 1 155 ASP n 1 156 TYR n 1 157 ASP n 1 158 CYS n 1 159 VAL n 1 160 SER n 1 161 PHE n 1 162 CYS n 1 163 TYR n 1 164 MET n 1 165 HIS n 1 166 HIS n 1 167 MET n 1 168 GLU n 1 169 LEU n 1 170 PRO n 1 171 THR n 1 172 GLY n 1 173 VAL n 1 174 HIS n 1 175 ALA n 1 176 GLY n 1 177 THR n 1 178 ASP n 1 179 LEU n 1 180 GLU n 1 181 GLY n 1 182 LYS n 1 183 PHE n 1 184 TYR n 1 185 GLY n 1 186 PRO n 1 187 PHE n 1 188 VAL n 1 189 ASP n 1 190 ARG n 1 191 GLN n 1 192 THR n 1 193 ALA n 1 194 GLN n 1 195 ALA n 1 196 ALA n 1 197 GLY n 1 198 THR n 1 199 ASP n 1 200 THR n 1 201 THR n 1 202 ILE n 1 203 THR n 1 204 LEU n 1 205 ASN n 1 206 VAL n 1 207 LEU n 1 208 ALA n 1 209 TRP n 1 210 LEU n 1 211 TYR n 1 212 ALA n 1 213 ALA n 1 214 VAL n 1 215 ILE n 1 216 ASN n 1 217 GLY n 1 218 ASP n 1 219 ARG n 1 220 TRP n 1 221 PHE n 1 222 LEU n 1 223 ASN n 1 224 ARG n 1 225 PHE n 1 226 THR n 1 227 THR n 1 228 THR n 1 229 LEU n 1 230 ASN n 1 231 ASP n 1 232 PHE n 1 233 ASN n 1 234 LEU n 1 235 VAL n 1 236 ALA n 1 237 MET n 1 238 LYS n 1 239 TYR n 1 240 ASN n 1 241 TYR n 1 242 GLU n 1 243 PRO n 1 244 LEU n 1 245 THR n 1 246 GLN n 1 247 ASP n 1 248 HIS n 1 249 VAL n 1 250 ASP n 1 251 ILE n 1 252 LEU n 1 253 GLY n 1 254 PRO n 1 255 LEU n 1 256 SER n 1 257 ALA n 1 258 GLN n 1 259 THR n 1 260 GLY n 1 261 ILE n 1 262 ALA n 1 263 VAL n 1 264 LEU n 1 265 ASP n 1 266 MET n 1 267 CYS n 1 268 ALA n 1 269 ALA n 1 270 LEU n 1 271 LYS n 1 272 GLU n 1 273 LEU n 1 274 LEU n 1 275 GLN n 1 276 ASN n 1 277 GLY n 1 278 MET n 1 279 ASN n 1 280 GLY n 1 281 ARG n 1 282 THR n 1 283 ILE n 1 284 LEU n 1 285 GLY n 1 286 SER n 1 287 THR n 1 288 ILE n 1 289 LEU n 1 290 GLU n 1 291 ASP n 1 292 GLU n 1 293 PHE n 1 294 THR n 1 295 PRO n 1 296 PHE n 1 297 ASP n 1 298 VAL n 1 299 VAL n 1 300 ARG n 1 301 GLN n 1 302 CYS n 1 303 SER n 1 304 GLY n 1 305 VAL n 1 306 THR n 1 307 PHE n 1 308 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Coronavirus _entity_src_gen.pdbx_gene_src_gene rep _entity_src_gen.gene_src_species 'SARS coronavirus' _entity_src_gen.gene_src_strain BJ01 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'SARS coronavirus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 228407 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pGEX4T-1 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code R1AB_CVHSA _struct_ref.pdbx_db_accession P59641 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDTVYCPRHVICTAEDMLNPNYEDLLIRKSNHSFLVQAGNVQLRVIGH SMQNCLLRLKVDTSNPKTPKYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNHTIKGSFLNGSCGSVGFNIDYDCVSFC YMHHMELPTGVHAGTDLEGKFYGPFVDRQTAQAAGTDTTITLNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYE PLTQDHVDILGPLSAQTGIAVLDMCAALKELLQNGMNGRTILGSTILEDEFTPFDVVRQCSGVTFQ ; _struct_ref.pdbx_align_begin 3241 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2PWX _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 308 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P59641 _struct_ref_seq.db_align_beg 3241 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 3546 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 306 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2PWX GLY A 1 ? UNP P59641 ? ? 'EXPRESSION TAG' -1 1 1 2PWX SER A 2 ? UNP P59641 ? ? 'EXPRESSION TAG' 0 2 1 2PWX ALA A 13 ? UNP P59641 GLY 3251 ENGINEERED 11 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 2PWX _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.08 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 40.90 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details '0.1M MES pH 6.2, 10% PEG6000, 1mM DTT, 5% DMSO, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV' _diffrn_detector.pdbx_collection_date 2007-01-15 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type RIGAKU _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? # _reflns.entry_id 2PWX _reflns.d_resolution_high 2.500 _reflns.d_resolution_low 19.660 _reflns.number_obs 10537 _reflns.pdbx_scaling_rejects 1371 _reflns.pdbx_Rmerge_I_obs 0.144 _reflns.pdbx_netI_over_sigmaI 4.200 _reflns.pdbx_chi_squared 1.340 _reflns.pdbx_redundancy 4.590 _reflns.percent_possible_obs 98.900 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.50 _reflns_shell.d_res_low 2.59 _reflns_shell.number_measured_obs ? _reflns_shell.number_measured_all 4895 _reflns_shell.number_unique_obs ? _reflns_shell.Rmerge_I_obs 0.306 _reflns_shell.meanI_over_sigI_obs 1.9 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared 0.650 _reflns_shell.pdbx_redundancy 4.71 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1038 _reflns_shell.percent_possible_all 100.00 _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 2PWX _refine.ls_d_res_high 2.500 _refine.ls_d_res_low 15.000 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 98.700 _refine.ls_number_reflns_obs 10483 _refine.ls_R_factor_R_work 0.244 _refine.ls_R_factor_R_free 0.296 _refine.ls_percent_reflns_R_free 5.000 _refine.ls_number_reflns_R_free 534 _refine.B_iso_mean 33.172 _refine.solvent_model_param_bsol 43.913 _refine.aniso_B[1][1] 0.310 _refine.aniso_B[2][2] -11.306 _refine.aniso_B[3][3] 10.996 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.overall_FOM_work_R_set 0.774 _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.details ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_overall_ESU_R ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2240 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 83 _refine_hist.number_atoms_total 2323 _refine_hist.d_res_high 2.500 _refine_hist.d_res_low 15.000 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_mcbond_it ? 1.285 1.500 ? 'X-RAY DIFFRACTION' ? c_scbond_it ? 1.992 2.000 ? 'X-RAY DIFFRACTION' ? c_mcangle_it ? 2.131 2.000 ? 'X-RAY DIFFRACTION' ? c_scangle_it ? 2.870 2.500 ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id 2.500 2.590 10 . 989 . 0.350 0.474 . 45 . . 1034 . 'X-RAY DIFFRACTION' 2.590 2.690 10 . 990 . 0.328 0.387 . 45 . . 1035 . 'X-RAY DIFFRACTION' 2.690 2.810 10 . 994 . 0.301 0.379 . 50 . . 1044 . 'X-RAY DIFFRACTION' 2.810 2.960 10 . 989 . 0.284 0.335 . 60 . . 1049 . 'X-RAY DIFFRACTION' 2.960 3.140 10 . 994 . 0.264 0.306 . 53 . . 1047 . 'X-RAY DIFFRACTION' 3.140 3.390 10 . 988 . 0.259 0.303 . 50 . . 1038 . 'X-RAY DIFFRACTION' 3.390 3.720 10 . 989 . 0.232 0.324 . 57 . . 1046 . 'X-RAY DIFFRACTION' 3.720 4.250 10 . 989 . 0.223 0.313 . 52 . . 1041 . 'X-RAY DIFFRACTION' 4.250 5.310 10 . 985 . 0.177 0.212 . 71 . . 1056 . 'X-RAY DIFFRACTION' 5.310 15.000 10 . 1042 . 0.215 0.246 . 51 . . 1093 . 'X-RAY DIFFRACTION' # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 CNS_TOPPAR:protein_rep.param ? 'X-RAY DIFFRACTION' 2 CNS_TOPPAR:water_rep.param ? 'X-RAY DIFFRACTION' # _struct.entry_id 2PWX _struct.title 'Crystal structure of G11A mutant of SARS-CoV 3C-like protease' _struct.pdbx_descriptor ;Replicase polyprotein 1ab (pp1ab) (ORF1AB) [Includes: Replicase polyprotein 1a (pp1a) (ORF1A)] [Contains: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Papain-like proteinase (EC 3.4.22.-) (PL-PRO) (PL2-PRO) (nsp3); Non-structural protein 4 (nsp4); 3C-like proteinase (EC 3.4.22.-) (3CL-PRO) (3CLp) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); RNA-directed RNA polymerase (EC 2.7.7.48) (RdRp) (Pol) (nsp12); Helicase (Hel) (nsp13); Exoribonuclease (EC 3.1.13.-) (ExoN) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)] ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2PWX _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'chymotrypsin fold, HYDROLASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.details 'The biological assembly is a monomer.' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 12 ? GLY A 17 ? SER A 10 GLY A 15 1 ? 6 HELX_P HELX_P2 2 HIS A 43 ? CYS A 46 ? HIS A 41 CYS A 44 5 ? 4 HELX_P HELX_P3 3 GLU A 49 ? ASN A 53 ? GLU A 47 ASN A 51 5 ? 5 HELX_P HELX_P4 4 ASN A 55 ? ARG A 62 ? ASN A 53 ARG A 60 1 ? 8 HELX_P HELX_P5 5 SER A 64 ? HIS A 66 ? SER A 62 HIS A 64 5 ? 3 HELX_P HELX_P6 6 GLY A 140 ? ASN A 144 ? GLY A 138 ASN A 142 5 ? 5 HELX_P HELX_P7 7 ILE A 202 ? ILE A 215 ? ILE A 200 ILE A 213 1 ? 14 HELX_P HELX_P8 8 THR A 228 ? TYR A 239 ? THR A 226 TYR A 237 1 ? 12 HELX_P HELX_P9 9 THR A 245 ? LEU A 252 ? THR A 243 LEU A 250 1 ? 8 HELX_P HELX_P10 10 LEU A 252 ? GLY A 260 ? LEU A 250 GLY A 258 1 ? 9 HELX_P HELX_P11 11 ALA A 262 ? ASN A 276 ? ALA A 260 ASN A 274 1 ? 15 HELX_P HELX_P12 12 THR A 294 ? VAL A 299 ? THR A 292 VAL A 297 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 7 ? B ? 5 ? C ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel B 1 2 ? parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel C 1 2 ? parallel C 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 75 ? GLN A 76 ? VAL A 73 GLN A 74 A 2 PHE A 68 ? ALA A 72 ? PHE A 66 ALA A 70 A 3 MET A 19 ? CYS A 24 ? MET A 17 CYS A 22 A 4 THR A 27 ? LEU A 34 ? THR A 25 LEU A 32 A 5 THR A 37 ? PRO A 41 ? THR A 35 PRO A 39 A 6 LEU A 88 ? VAL A 93 ? LEU A 86 VAL A 91 A 7 VAL A 79 ? GLN A 85 ? VAL A 77 GLN A 83 B 1 TYR A 103 ? PHE A 105 ? TYR A 101 PHE A 103 B 2 VAL A 159 ? LEU A 169 ? VAL A 157 LEU A 167 B 3 VAL A 150 ? ILE A 154 ? VAL A 148 ILE A 152 B 4 PHE A 114 ? TYR A 120 ? PHE A 112 TYR A 118 B 5 SER A 123 ? CYS A 130 ? SER A 121 CYS A 128 C 1 TYR A 103 ? PHE A 105 ? TYR A 101 PHE A 103 C 2 VAL A 159 ? LEU A 169 ? VAL A 157 LEU A 167 C 3 VAL A 173 ? THR A 177 ? VAL A 171 THR A 175 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O VAL A 75 ? O VAL A 73 N ALA A 72 ? N ALA A 70 A 2 3 O GLN A 71 ? O GLN A 69 N GLN A 21 ? N GLN A 19 A 3 4 N VAL A 20 ? N VAL A 18 O GLY A 31 ? O GLY A 29 A 4 5 N LEU A 32 ? N LEU A 30 O TYR A 39 ? O TYR A 37 A 5 6 N CYS A 40 ? N CYS A 38 O LEU A 89 ? O LEU A 87 A 6 7 O LYS A 92 ? O LYS A 90 N ILE A 80 ? N ILE A 78 B 1 2 N LYS A 104 ? N LYS A 102 O PHE A 161 ? O PHE A 159 B 2 3 O SER A 160 ? O SER A 158 N ASN A 153 ? N ASN A 151 B 3 4 O PHE A 152 ? O PHE A 150 N SER A 115 ? N SER A 113 B 4 5 N ALA A 118 ? N ALA A 116 O SER A 125 ? O SER A 123 C 1 2 N LYS A 104 ? N LYS A 102 O PHE A 161 ? O PHE A 159 C 2 3 N LEU A 169 ? N LEU A 167 O VAL A 173 ? O VAL A 171 # _atom_sites.entry_id 2PWX _atom_sites.fract_transf_matrix[1][1] 0.029285 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015140 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007750 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -1 ? ? ? A . n A 1 2 SER 2 0 ? ? ? A . n A 1 3 SER 3 1 ? ? ? A . n A 1 4 GLY 4 2 ? ? ? A . n A 1 5 PHE 5 3 ? ? ? A . n A 1 6 ARG 6 4 4 ARG ARG A . n A 1 7 LYS 7 5 5 LYS LYS A . n A 1 8 MET 8 6 6 MET MET A . n A 1 9 ALA 9 7 7 ALA ALA A . n A 1 10 PHE 10 8 8 PHE PHE A . n A 1 11 PRO 11 9 9 PRO PRO A . n A 1 12 SER 12 10 10 SER SER A . n A 1 13 ALA 13 11 11 ALA ALA A . n A 1 14 LYS 14 12 12 LYS LYS A . n A 1 15 VAL 15 13 13 VAL VAL A . n A 1 16 GLU 16 14 14 GLU GLU A . n A 1 17 GLY 17 15 15 GLY GLY A . n A 1 18 CYS 18 16 16 CYS CYS A . n A 1 19 MET 19 17 17 MET MET A . n A 1 20 VAL 20 18 18 VAL VAL A . n A 1 21 GLN 21 19 19 GLN GLN A . n A 1 22 VAL 22 20 20 VAL VAL A . n A 1 23 THR 23 21 21 THR THR A . n A 1 24 CYS 24 22 22 CYS CYS A . n A 1 25 GLY 25 23 23 GLY GLY A . n A 1 26 THR 26 24 24 THR THR A . n A 1 27 THR 27 25 25 THR THR A . n A 1 28 THR 28 26 26 THR THR A . n A 1 29 LEU 29 27 27 LEU LEU A . n A 1 30 ASN 30 28 28 ASN ASN A . n A 1 31 GLY 31 29 29 GLY GLY A . n A 1 32 LEU 32 30 30 LEU LEU A . n A 1 33 TRP 33 31 31 TRP TRP A . n A 1 34 LEU 34 32 32 LEU LEU A . n A 1 35 ASP 35 33 33 ASP ASP A . n A 1 36 ASP 36 34 34 ASP ASP A . n A 1 37 THR 37 35 35 THR THR A . n A 1 38 VAL 38 36 36 VAL VAL A . n A 1 39 TYR 39 37 37 TYR TYR A . n A 1 40 CYS 40 38 38 CYS CYS A . n A 1 41 PRO 41 39 39 PRO PRO A . n A 1 42 ARG 42 40 40 ARG ARG A . n A 1 43 HIS 43 41 41 HIS HIS A . n A 1 44 VAL 44 42 42 VAL VAL A . n A 1 45 ILE 45 43 43 ILE ILE A . n A 1 46 CYS 46 44 44 CYS CYS A . n A 1 47 THR 47 45 45 THR THR A . n A 1 48 ALA 48 46 46 ALA ALA A . n A 1 49 GLU 49 47 47 GLU GLU A . n A 1 50 ASP 50 48 48 ASP ASP A . n A 1 51 MET 51 49 49 MET MET A . n A 1 52 LEU 52 50 50 LEU LEU A . n A 1 53 ASN 53 51 51 ASN ASN A . n A 1 54 PRO 54 52 52 PRO PRO A . n A 1 55 ASN 55 53 53 ASN ASN A . n A 1 56 TYR 56 54 54 TYR TYR A . n A 1 57 GLU 57 55 55 GLU GLU A . n A 1 58 ASP 58 56 56 ASP ASP A . n A 1 59 LEU 59 57 57 LEU LEU A . n A 1 60 LEU 60 58 58 LEU LEU A . n A 1 61 ILE 61 59 59 ILE ILE A . n A 1 62 ARG 62 60 60 ARG ARG A . n A 1 63 LYS 63 61 61 LYS LYS A . n A 1 64 SER 64 62 62 SER SER A . n A 1 65 ASN 65 63 63 ASN ASN A . n A 1 66 HIS 66 64 64 HIS HIS A . n A 1 67 SER 67 65 65 SER SER A . n A 1 68 PHE 68 66 66 PHE PHE A . n A 1 69 LEU 69 67 67 LEU LEU A . n A 1 70 VAL 70 68 68 VAL VAL A . n A 1 71 GLN 71 69 69 GLN GLN A . n A 1 72 ALA 72 70 70 ALA ALA A . n A 1 73 GLY 73 71 71 GLY GLY A . n A 1 74 ASN 74 72 72 ASN ASN A . n A 1 75 VAL 75 73 73 VAL VAL A . n A 1 76 GLN 76 74 74 GLN GLN A . n A 1 77 LEU 77 75 75 LEU LEU A . n A 1 78 ARG 78 76 76 ARG ARG A . n A 1 79 VAL 79 77 77 VAL VAL A . n A 1 80 ILE 80 78 78 ILE ILE A . n A 1 81 GLY 81 79 79 GLY GLY A . n A 1 82 HIS 82 80 80 HIS HIS A . n A 1 83 SER 83 81 81 SER SER A . n A 1 84 MET 84 82 82 MET MET A . n A 1 85 GLN 85 83 83 GLN GLN A . n A 1 86 ASN 86 84 84 ASN ASN A . n A 1 87 CYS 87 85 85 CYS CYS A . n A 1 88 LEU 88 86 86 LEU LEU A . n A 1 89 LEU 89 87 87 LEU LEU A . n A 1 90 ARG 90 88 88 ARG ARG A . n A 1 91 LEU 91 89 89 LEU LEU A . n A 1 92 LYS 92 90 90 LYS LYS A . n A 1 93 VAL 93 91 91 VAL VAL A . n A 1 94 ASP 94 92 92 ASP ASP A . n A 1 95 THR 95 93 93 THR THR A . n A 1 96 SER 96 94 94 SER SER A . n A 1 97 ASN 97 95 95 ASN ASN A . n A 1 98 PRO 98 96 96 PRO PRO A . n A 1 99 LYS 99 97 97 LYS LYS A . n A 1 100 THR 100 98 98 THR THR A . n A 1 101 PRO 101 99 99 PRO PRO A . n A 1 102 LYS 102 100 100 LYS LYS A . n A 1 103 TYR 103 101 101 TYR TYR A . n A 1 104 LYS 104 102 102 LYS LYS A . n A 1 105 PHE 105 103 103 PHE PHE A . n A 1 106 VAL 106 104 104 VAL VAL A . n A 1 107 ARG 107 105 105 ARG ARG A . n A 1 108 ILE 108 106 106 ILE ILE A . n A 1 109 GLN 109 107 107 GLN GLN A . n A 1 110 PRO 110 108 108 PRO PRO A . n A 1 111 GLY 111 109 109 GLY GLY A . n A 1 112 GLN 112 110 110 GLN GLN A . n A 1 113 THR 113 111 111 THR THR A . n A 1 114 PHE 114 112 112 PHE PHE A . n A 1 115 SER 115 113 113 SER SER A . n A 1 116 VAL 116 114 114 VAL VAL A . n A 1 117 LEU 117 115 115 LEU LEU A . n A 1 118 ALA 118 116 116 ALA ALA A . n A 1 119 CYS 119 117 117 CYS CYS A . n A 1 120 TYR 120 118 118 TYR TYR A . n A 1 121 ASN 121 119 119 ASN ASN A . n A 1 122 GLY 122 120 120 GLY GLY A . n A 1 123 SER 123 121 121 SER SER A . n A 1 124 PRO 124 122 122 PRO PRO A . n A 1 125 SER 125 123 123 SER SER A . n A 1 126 GLY 126 124 124 GLY GLY A . n A 1 127 VAL 127 125 125 VAL VAL A . n A 1 128 TYR 128 126 126 TYR TYR A . n A 1 129 GLN 129 127 127 GLN GLN A . n A 1 130 CYS 130 128 128 CYS CYS A . n A 1 131 ALA 131 129 129 ALA ALA A . n A 1 132 MET 132 130 130 MET MET A . n A 1 133 ARG 133 131 131 ARG ARG A . n A 1 134 PRO 134 132 132 PRO PRO A . n A 1 135 ASN 135 133 133 ASN ASN A . n A 1 136 HIS 136 134 134 HIS HIS A . n A 1 137 THR 137 135 135 THR THR A . n A 1 138 ILE 138 136 136 ILE ILE A . n A 1 139 LYS 139 137 137 LYS LYS A . n A 1 140 GLY 140 138 138 GLY GLY A . n A 1 141 SER 141 139 139 SER SER A . n A 1 142 PHE 142 140 140 PHE PHE A . n A 1 143 LEU 143 141 141 LEU LEU A . n A 1 144 ASN 144 142 142 ASN ASN A . n A 1 145 GLY 145 143 143 GLY GLY A . n A 1 146 SER 146 144 144 SER SER A . n A 1 147 CYS 147 145 145 CYS CYS A . n A 1 148 GLY 148 146 146 GLY GLY A . n A 1 149 SER 149 147 147 SER SER A . n A 1 150 VAL 150 148 148 VAL VAL A . n A 1 151 GLY 151 149 149 GLY GLY A . n A 1 152 PHE 152 150 150 PHE PHE A . n A 1 153 ASN 153 151 151 ASN ASN A . n A 1 154 ILE 154 152 152 ILE ILE A . n A 1 155 ASP 155 153 153 ASP ASP A . n A 1 156 TYR 156 154 154 TYR TYR A . n A 1 157 ASP 157 155 ? ? ? A . n A 1 158 CYS 158 156 156 CYS CYS A . n A 1 159 VAL 159 157 157 VAL VAL A . n A 1 160 SER 160 158 158 SER SER A . n A 1 161 PHE 161 159 159 PHE PHE A . n A 1 162 CYS 162 160 160 CYS CYS A . n A 1 163 TYR 163 161 161 TYR TYR A . n A 1 164 MET 164 162 162 MET MET A . n A 1 165 HIS 165 163 163 HIS HIS A . n A 1 166 HIS 166 164 164 HIS HIS A . n A 1 167 MET 167 165 165 MET MET A . n A 1 168 GLU 168 166 166 GLU GLU A . n A 1 169 LEU 169 167 167 LEU LEU A . n A 1 170 PRO 170 168 168 PRO PRO A . n A 1 171 THR 171 169 169 THR THR A . n A 1 172 GLY 172 170 170 GLY GLY A . n A 1 173 VAL 173 171 171 VAL VAL A . n A 1 174 HIS 174 172 172 HIS HIS A . n A 1 175 ALA 175 173 173 ALA ALA A . n A 1 176 GLY 176 174 174 GLY GLY A . n A 1 177 THR 177 175 175 THR THR A . n A 1 178 ASP 178 176 176 ASP ASP A . n A 1 179 LEU 179 177 177 LEU LEU A . n A 1 180 GLU 180 178 178 GLU GLU A . n A 1 181 GLY 181 179 179 GLY GLY A . n A 1 182 LYS 182 180 180 LYS LYS A . n A 1 183 PHE 183 181 181 PHE PHE A . n A 1 184 TYR 184 182 182 TYR TYR A . n A 1 185 GLY 185 183 183 GLY GLY A . n A 1 186 PRO 186 184 184 PRO PRO A . n A 1 187 PHE 187 185 185 PHE PHE A . n A 1 188 VAL 188 186 186 VAL VAL A . n A 1 189 ASP 189 187 187 ASP ASP A . n A 1 190 ARG 190 188 188 ARG ARG A . n A 1 191 GLN 191 189 189 GLN GLN A . n A 1 192 THR 192 190 190 THR THR A . n A 1 193 ALA 193 191 191 ALA ALA A . n A 1 194 GLN 194 192 192 GLN GLN A . n A 1 195 ALA 195 193 193 ALA ALA A . n A 1 196 ALA 196 194 194 ALA ALA A . n A 1 197 GLY 197 195 195 GLY GLY A . n A 1 198 THR 198 196 196 THR THR A . n A 1 199 ASP 199 197 197 ASP ASP A . n A 1 200 THR 200 198 198 THR THR A . n A 1 201 THR 201 199 199 THR THR A . n A 1 202 ILE 202 200 200 ILE ILE A . n A 1 203 THR 203 201 201 THR THR A . n A 1 204 LEU 204 202 202 LEU LEU A . n A 1 205 ASN 205 203 203 ASN ASN A . n A 1 206 VAL 206 204 204 VAL VAL A . n A 1 207 LEU 207 205 205 LEU LEU A . n A 1 208 ALA 208 206 206 ALA ALA A . n A 1 209 TRP 209 207 207 TRP TRP A . n A 1 210 LEU 210 208 208 LEU LEU A . n A 1 211 TYR 211 209 209 TYR TYR A . n A 1 212 ALA 212 210 210 ALA ALA A . n A 1 213 ALA 213 211 211 ALA ALA A . n A 1 214 VAL 214 212 212 VAL VAL A . n A 1 215 ILE 215 213 213 ILE ILE A . n A 1 216 ASN 216 214 214 ASN ASN A . n A 1 217 GLY 217 215 215 GLY GLY A . n A 1 218 ASP 218 216 216 ASP ASP A . n A 1 219 ARG 219 217 217 ARG ARG A . n A 1 220 TRP 220 218 218 TRP TRP A . n A 1 221 PHE 221 219 219 PHE PHE A . n A 1 222 LEU 222 220 220 LEU LEU A . n A 1 223 ASN 223 221 221 ASN ASN A . n A 1 224 ARG 224 222 ? ? ? A . n A 1 225 PHE 225 223 ? ? ? A . n A 1 226 THR 226 224 ? ? ? A . n A 1 227 THR 227 225 225 THR THR A . n A 1 228 THR 228 226 226 THR THR A . n A 1 229 LEU 229 227 227 LEU LEU A . n A 1 230 ASN 230 228 228 ASN ASN A . n A 1 231 ASP 231 229 229 ASP ASP A . n A 1 232 PHE 232 230 230 PHE PHE A . n A 1 233 ASN 233 231 231 ASN ASN A . n A 1 234 LEU 234 232 232 LEU LEU A . n A 1 235 VAL 235 233 233 VAL VAL A . n A 1 236 ALA 236 234 234 ALA ALA A . n A 1 237 MET 237 235 235 MET MET A . n A 1 238 LYS 238 236 236 LYS LYS A . n A 1 239 TYR 239 237 237 TYR TYR A . n A 1 240 ASN 240 238 238 ASN ASN A . n A 1 241 TYR 241 239 239 TYR TYR A . n A 1 242 GLU 242 240 240 GLU GLU A . n A 1 243 PRO 243 241 241 PRO PRO A . n A 1 244 LEU 244 242 242 LEU LEU A . n A 1 245 THR 245 243 243 THR THR A . n A 1 246 GLN 246 244 244 GLN GLN A . n A 1 247 ASP 247 245 245 ASP ASP A . n A 1 248 HIS 248 246 246 HIS HIS A . n A 1 249 VAL 249 247 247 VAL VAL A . n A 1 250 ASP 250 248 248 ASP ASP A . n A 1 251 ILE 251 249 249 ILE ILE A . n A 1 252 LEU 252 250 250 LEU LEU A . n A 1 253 GLY 253 251 251 GLY GLY A . n A 1 254 PRO 254 252 252 PRO PRO A . n A 1 255 LEU 255 253 253 LEU LEU A . n A 1 256 SER 256 254 254 SER SER A . n A 1 257 ALA 257 255 255 ALA ALA A . n A 1 258 GLN 258 256 256 GLN GLN A . n A 1 259 THR 259 257 257 THR THR A . n A 1 260 GLY 260 258 258 GLY GLY A . n A 1 261 ILE 261 259 259 ILE ILE A . n A 1 262 ALA 262 260 260 ALA ALA A . n A 1 263 VAL 263 261 261 VAL VAL A . n A 1 264 LEU 264 262 262 LEU LEU A . n A 1 265 ASP 265 263 263 ASP ASP A . n A 1 266 MET 266 264 264 MET MET A . n A 1 267 CYS 267 265 265 CYS CYS A . n A 1 268 ALA 268 266 266 ALA ALA A . n A 1 269 ALA 269 267 267 ALA ALA A . n A 1 270 LEU 270 268 268 LEU LEU A . n A 1 271 LYS 271 269 269 LYS LYS A . n A 1 272 GLU 272 270 270 GLU GLU A . n A 1 273 LEU 273 271 271 LEU LEU A . n A 1 274 LEU 274 272 272 LEU LEU A . n A 1 275 GLN 275 273 273 GLN GLN A . n A 1 276 ASN 276 274 274 ASN ASN A . n A 1 277 GLY 277 275 275 GLY GLY A . n A 1 278 MET 278 276 276 MET MET A . n A 1 279 ASN 279 277 ? ? ? A . n A 1 280 GLY 280 278 ? ? ? A . n A 1 281 ARG 281 279 ? ? ? A . n A 1 282 THR 282 280 280 THR THR A . n A 1 283 ILE 283 281 281 ILE ILE A . n A 1 284 LEU 284 282 282 LEU LEU A . n A 1 285 GLY 285 283 283 GLY GLY A . n A 1 286 SER 286 284 284 SER SER A . n A 1 287 THR 287 285 285 THR THR A . n A 1 288 ILE 288 286 286 ILE ILE A . n A 1 289 LEU 289 287 287 LEU LEU A . n A 1 290 GLU 290 288 288 GLU GLU A . n A 1 291 ASP 291 289 289 ASP ASP A . n A 1 292 GLU 292 290 290 GLU GLU A . n A 1 293 PHE 293 291 291 PHE PHE A . n A 1 294 THR 294 292 292 THR THR A . n A 1 295 PRO 295 293 293 PRO PRO A . n A 1 296 PHE 296 294 294 PHE PHE A . n A 1 297 ASP 297 295 295 ASP ASP A . n A 1 298 VAL 298 296 296 VAL VAL A . n A 1 299 VAL 299 297 297 VAL VAL A . n A 1 300 ARG 300 298 298 ARG ARG A . n A 1 301 GLN 301 299 299 GLN GLN A . n A 1 302 CYS 302 300 ? ? ? A . n A 1 303 SER 303 301 ? ? ? A . n A 1 304 GLY 304 302 ? ? ? A . n A 1 305 VAL 305 303 ? ? ? A . n A 1 306 THR 306 304 ? ? ? A . n A 1 307 PHE 307 305 ? ? ? A . n A 1 308 GLN 308 306 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 307 1 HOH HOH A . B 2 HOH 2 308 2 HOH HOH A . B 2 HOH 3 309 3 HOH HOH A . B 2 HOH 4 310 4 HOH HOH A . B 2 HOH 5 311 5 HOH HOH A . B 2 HOH 6 312 6 HOH HOH A . B 2 HOH 7 313 7 HOH HOH A . B 2 HOH 8 314 8 HOH HOH A . B 2 HOH 9 315 9 HOH HOH A . B 2 HOH 10 316 10 HOH HOH A . B 2 HOH 11 317 11 HOH HOH A . B 2 HOH 12 318 12 HOH HOH A . B 2 HOH 13 319 13 HOH HOH A . B 2 HOH 14 320 14 HOH HOH A . B 2 HOH 15 321 15 HOH HOH A . B 2 HOH 16 322 16 HOH HOH A . B 2 HOH 17 323 17 HOH HOH A . B 2 HOH 18 324 18 HOH HOH A . B 2 HOH 19 325 19 HOH HOH A . B 2 HOH 20 326 20 HOH HOH A . B 2 HOH 21 327 21 HOH HOH A . B 2 HOH 22 328 22 HOH HOH A . B 2 HOH 23 329 23 HOH HOH A . B 2 HOH 24 330 24 HOH HOH A . B 2 HOH 25 331 25 HOH HOH A . B 2 HOH 26 332 26 HOH HOH A . B 2 HOH 27 333 27 HOH HOH A . B 2 HOH 28 334 28 HOH HOH A . B 2 HOH 29 335 29 HOH HOH A . B 2 HOH 30 336 30 HOH HOH A . B 2 HOH 31 337 31 HOH HOH A . B 2 HOH 32 338 32 HOH HOH A . B 2 HOH 33 339 33 HOH HOH A . B 2 HOH 34 340 34 HOH HOH A . B 2 HOH 35 341 35 HOH HOH A . B 2 HOH 36 342 36 HOH HOH A . B 2 HOH 37 343 37 HOH HOH A . B 2 HOH 38 344 38 HOH HOH A . B 2 HOH 39 345 39 HOH HOH A . B 2 HOH 40 346 40 HOH HOH A . B 2 HOH 41 347 41 HOH HOH A . B 2 HOH 42 348 42 HOH HOH A . B 2 HOH 43 349 43 HOH HOH A . B 2 HOH 44 350 44 HOH HOH A . B 2 HOH 45 351 45 HOH HOH A . B 2 HOH 46 352 46 HOH HOH A . B 2 HOH 47 353 47 HOH HOH A . B 2 HOH 48 354 48 HOH HOH A . B 2 HOH 49 355 49 HOH HOH A . B 2 HOH 50 356 50 HOH HOH A . B 2 HOH 51 357 51 HOH HOH A . B 2 HOH 52 358 52 HOH HOH A . B 2 HOH 53 359 53 HOH HOH A . B 2 HOH 54 360 54 HOH HOH A . B 2 HOH 55 361 55 HOH HOH A . B 2 HOH 56 362 56 HOH HOH A . B 2 HOH 57 363 57 HOH HOH A . B 2 HOH 58 364 58 HOH HOH A . B 2 HOH 59 365 59 HOH HOH A . B 2 HOH 60 366 60 HOH HOH A . B 2 HOH 61 367 61 HOH HOH A . B 2 HOH 62 368 62 HOH HOH A . B 2 HOH 63 369 63 HOH HOH A . B 2 HOH 64 370 64 HOH HOH A . B 2 HOH 65 371 65 HOH HOH A . B 2 HOH 66 372 66 HOH HOH A . B 2 HOH 67 373 67 HOH HOH A . B 2 HOH 68 374 68 HOH HOH A . B 2 HOH 69 375 69 HOH HOH A . B 2 HOH 70 376 70 HOH HOH A . B 2 HOH 71 377 71 HOH HOH A . B 2 HOH 72 378 72 HOH HOH A . B 2 HOH 73 379 73 HOH HOH A . B 2 HOH 74 380 74 HOH HOH A . B 2 HOH 75 381 75 HOH HOH A . B 2 HOH 76 382 76 HOH HOH A . B 2 HOH 77 383 77 HOH HOH A . B 2 HOH 78 384 78 HOH HOH A . B 2 HOH 79 385 79 HOH HOH A . B 2 HOH 80 386 80 HOH HOH A . B 2 HOH 81 387 81 HOH HOH A . B 2 HOH 82 388 82 HOH HOH A . B 2 HOH 83 389 83 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-10-30 2 'Structure model' 1 1 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Source and taxonomy' 2 2 'Structure model' 'Version format compliance' # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal d*TREK 7.1SSI 'May 1 2001' package 'Pflugrath, J.W.' jwp@RigakuMSC.com 'data processing' http://www.msc.com/protein/dtrek.html ? ? 1 CNS . ? package 'Axel T. Brunger' axel.brunger@yale.edu refinement http://cns.csb.yale.edu/v1.1/ Fortran_77 ? 2 PDB_EXTRACT 2.000 'April. 3, 2006' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 3 CrystalClear . ? ? ? ? 'data collection' ? ? ? 4 d*TREK . ? ? ? ? 'data reduction' ? ? ? 5 d*TREK . ? ? ? ? 'data scaling' ? ? ? 6 MOLREP . ? ? ? ? phasing ? ? ? 7 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 5 ? ? -73.89 -155.61 2 1 PRO A 9 ? ? -89.79 -96.23 3 1 SER A 10 ? ? 64.93 63.02 4 1 ASP A 33 ? ? 54.33 -134.87 5 1 ASN A 51 ? ? 172.39 80.63 6 1 ARG A 60 ? ? -77.65 23.93 7 1 ALA A 70 ? ? -114.14 75.58 8 1 ASN A 84 ? ? 53.41 -120.06 9 1 ILE A 106 ? ? -114.51 -162.45 10 1 CYS A 128 ? ? -173.93 -179.17 11 1 SER A 144 ? ? -145.28 55.26 12 1 HIS A 164 ? ? -121.72 -52.19 13 1 LEU A 177 ? ? -68.87 14.04 14 1 ASP A 187 ? ? -109.44 56.27 15 1 ASN A 214 ? ? -165.59 7.96 16 1 ARG A 217 ? ? -149.10 -21.91 17 1 TRP A 218 ? ? -48.32 -17.99 18 1 LEU A 227 ? ? -56.07 -75.41 19 1 ALA A 255 ? ? -52.39 -74.93 20 1 VAL A 297 ? ? -63.79 15.64 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -1 ? A GLY 1 2 1 Y 1 A SER 0 ? A SER 2 3 1 Y 1 A SER 1 ? A SER 3 4 1 Y 1 A GLY 2 ? A GLY 4 5 1 Y 1 A PHE 3 ? A PHE 5 6 1 Y 1 A ASP 155 ? A ASP 157 7 1 Y 1 A ARG 222 ? A ARG 224 8 1 Y 1 A PHE 223 ? A PHE 225 9 1 Y 1 A THR 224 ? A THR 226 10 1 Y 1 A ASN 277 ? A ASN 279 11 1 Y 1 A GLY 278 ? A GLY 280 12 1 Y 1 A ARG 279 ? A ARG 281 13 1 Y 1 A CYS 300 ? A CYS 302 14 1 Y 1 A SER 301 ? A SER 303 15 1 Y 1 A GLY 302 ? A GLY 304 16 1 Y 1 A VAL 303 ? A VAL 305 17 1 Y 1 A THR 304 ? A THR 306 18 1 Y 1 A PHE 305 ? A PHE 307 19 1 Y 1 A GLN 306 ? A GLN 308 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #