data_2PXI # _entry.id 2PXI # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.377 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2PXI pdb_00002pxi 10.2210/pdb2pxi/pdb NDB PD1008 ? ? RCSB RCSB042889 ? ? WWPDB D_1000042889 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2ISO . unspecified PDB 2ISP . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2PXI _pdbx_database_status.recvd_initial_deposition_date 2007-05-14 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'McKenna, C.E.' 1 'Batra, V.K.' 2 'Beard, W.A.' 3 'Pedersen, L.C.' 4 'Wilson, S.H.' 5 # _citation.id primary _citation.title '(R)-beta,gamma-fluoromethylene-dGTP-DNA ternary complex with DNA polymerase beta.' _citation.journal_abbrev J.Am.Chem.Soc. _citation.journal_volume 129 _citation.page_first 15412 _citation.page_last 15413 _citation.year 2007 _citation.journal_id_ASTM JACSAT _citation.country US _citation.journal_id_ISSN 0002-7863 _citation.journal_id_CSD 0004 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 18031037 _citation.pdbx_database_id_DOI 10.1021/ja072127v # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'McKenna, C.E.' 1 ? primary 'Kashemirov, B.A.' 2 ? primary 'Upton, T.G.' 3 ? primary 'Batra, V.K.' 4 ? primary 'Goodman, M.F.' 5 ? primary 'Pedersen, L.C.' 6 ? primary 'Beard, W.A.' 7 ? primary 'Wilson, S.H.' 8 ? # _cell.entry_id 2PXI _cell.length_a 50.600 _cell.length_b 80.200 _cell.length_c 55.400 _cell.angle_alpha 90.00 _cell.angle_beta 107.80 _cell.angle_gamma 90.00 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2PXI _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(*CP*CP*GP*AP*CP*CP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'" 4829.133 1 ? ? ? ? 2 polymer syn "5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*(DOC))-3'" 3045.005 1 ? ? ? ? 3 polymer syn "5'-D(P*GP*TP*CP*GP*G)-3'" 1536.035 1 ? ? ? ? 4 polymer man 'DNA polymerase beta' 38241.672 1 '2.7.7.7, 4.2.99.-' ? ? ? 5 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 6 non-polymer syn 'SODIUM ION' 22.990 3 ? ? ? ? 7 non-polymer syn 'CHLORIDE ION' 35.453 5 ? ? ? ? 8 non-polymer syn "2'-DEOXY-5'-O-[(R)-{[(R)-[(R)-FLUORO(PHOSPHONO)METHYL](HYDROXY)PHOSPHORYL]OXY}(HYDROXY)PHOSPHORYL]GUANOSINE" 523.199 1 ? ? ? ? 9 water nat water 18.015 321 ? ? ? ? # _entity_name_sys.entity_id 4 _entity_name_sys.name 'E.C.2.7.7.7, 4.2.99.-' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DC)(DC)(DG)(DA)(DC)(DC)(DG)(DC)(DG)(DC)(DA)(DT)(DC)(DA)(DG)(DC)' CCGACCGCGCATCAGC T ? 2 polydeoxyribonucleotide no yes '(DG)(DC)(DT)(DG)(DA)(DT)(DG)(DC)(DG)(DOC)' GCTGATGCGC P ? 3 polydeoxyribonucleotide no no '(DG)(DT)(DC)(DG)(DG)' GTCGG D ? 4 'polypeptide(L)' no no ;MSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATG KLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQD IVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQ LPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIF DYIQWKYREPKDRSE ; ;MSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATG KLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQD IVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQ LPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIF DYIQWKYREPKDRSE ; A ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DC n 1 3 DG n 1 4 DA n 1 5 DC n 1 6 DC n 1 7 DG n 1 8 DC n 1 9 DG n 1 10 DC n 1 11 DA n 1 12 DT n 1 13 DC n 1 14 DA n 1 15 DG n 1 16 DC n 2 1 DG n 2 2 DC n 2 3 DT n 2 4 DG n 2 5 DA n 2 6 DT n 2 7 DG n 2 8 DC n 2 9 DG n 2 10 DOC n 3 1 DG n 3 2 DT n 3 3 DC n 3 4 DG n 3 5 DG n 4 1 MET n 4 2 SER n 4 3 LYS n 4 4 ARG n 4 5 LYS n 4 6 ALA n 4 7 PRO n 4 8 GLN n 4 9 GLU n 4 10 THR n 4 11 LEU n 4 12 ASN n 4 13 GLY n 4 14 GLY n 4 15 ILE n 4 16 THR n 4 17 ASP n 4 18 MET n 4 19 LEU n 4 20 THR n 4 21 GLU n 4 22 LEU n 4 23 ALA n 4 24 ASN n 4 25 PHE n 4 26 GLU n 4 27 LYS n 4 28 ASN n 4 29 VAL n 4 30 SER n 4 31 GLN n 4 32 ALA n 4 33 ILE n 4 34 HIS n 4 35 LYS n 4 36 TYR n 4 37 ASN n 4 38 ALA n 4 39 TYR n 4 40 ARG n 4 41 LYS n 4 42 ALA n 4 43 ALA n 4 44 SER n 4 45 VAL n 4 46 ILE n 4 47 ALA n 4 48 LYS n 4 49 TYR n 4 50 PRO n 4 51 HIS n 4 52 LYS n 4 53 ILE n 4 54 LYS n 4 55 SER n 4 56 GLY n 4 57 ALA n 4 58 GLU n 4 59 ALA n 4 60 LYS n 4 61 LYS n 4 62 LEU n 4 63 PRO n 4 64 GLY n 4 65 VAL n 4 66 GLY n 4 67 THR n 4 68 LYS n 4 69 ILE n 4 70 ALA n 4 71 GLU n 4 72 LYS n 4 73 ILE n 4 74 ASP n 4 75 GLU n 4 76 PHE n 4 77 LEU n 4 78 ALA n 4 79 THR n 4 80 GLY n 4 81 LYS n 4 82 LEU n 4 83 ARG n 4 84 LYS n 4 85 LEU n 4 86 GLU n 4 87 LYS n 4 88 ILE n 4 89 ARG n 4 90 GLN n 4 91 ASP n 4 92 ASP n 4 93 THR n 4 94 SER n 4 95 SER n 4 96 SER n 4 97 ILE n 4 98 ASN n 4 99 PHE n 4 100 LEU n 4 101 THR n 4 102 ARG n 4 103 VAL n 4 104 SER n 4 105 GLY n 4 106 ILE n 4 107 GLY n 4 108 PRO n 4 109 SER n 4 110 ALA n 4 111 ALA n 4 112 ARG n 4 113 LYS n 4 114 PHE n 4 115 VAL n 4 116 ASP n 4 117 GLU n 4 118 GLY n 4 119 ILE n 4 120 LYS n 4 121 THR n 4 122 LEU n 4 123 GLU n 4 124 ASP n 4 125 LEU n 4 126 ARG n 4 127 LYS n 4 128 ASN n 4 129 GLU n 4 130 ASP n 4 131 LYS n 4 132 LEU n 4 133 ASN n 4 134 HIS n 4 135 HIS n 4 136 GLN n 4 137 ARG n 4 138 ILE n 4 139 GLY n 4 140 LEU n 4 141 LYS n 4 142 TYR n 4 143 PHE n 4 144 GLY n 4 145 ASP n 4 146 PHE n 4 147 GLU n 4 148 LYS n 4 149 ARG n 4 150 ILE n 4 151 PRO n 4 152 ARG n 4 153 GLU n 4 154 GLU n 4 155 MET n 4 156 LEU n 4 157 GLN n 4 158 MET n 4 159 GLN n 4 160 ASP n 4 161 ILE n 4 162 VAL n 4 163 LEU n 4 164 ASN n 4 165 GLU n 4 166 VAL n 4 167 LYS n 4 168 LYS n 4 169 VAL n 4 170 ASP n 4 171 SER n 4 172 GLU n 4 173 TYR n 4 174 ILE n 4 175 ALA n 4 176 THR n 4 177 VAL n 4 178 CYS n 4 179 GLY n 4 180 SER n 4 181 PHE n 4 182 ARG n 4 183 ARG n 4 184 GLY n 4 185 ALA n 4 186 GLU n 4 187 SER n 4 188 SER n 4 189 GLY n 4 190 ASP n 4 191 MET n 4 192 ASP n 4 193 VAL n 4 194 LEU n 4 195 LEU n 4 196 THR n 4 197 HIS n 4 198 PRO n 4 199 SER n 4 200 PHE n 4 201 THR n 4 202 SER n 4 203 GLU n 4 204 SER n 4 205 THR n 4 206 LYS n 4 207 GLN n 4 208 PRO n 4 209 LYS n 4 210 LEU n 4 211 LEU n 4 212 HIS n 4 213 GLN n 4 214 VAL n 4 215 VAL n 4 216 GLU n 4 217 GLN n 4 218 LEU n 4 219 GLN n 4 220 LYS n 4 221 VAL n 4 222 HIS n 4 223 PHE n 4 224 ILE n 4 225 THR n 4 226 ASP n 4 227 THR n 4 228 LEU n 4 229 SER n 4 230 LYS n 4 231 GLY n 4 232 GLU n 4 233 THR n 4 234 LYS n 4 235 PHE n 4 236 MET n 4 237 GLY n 4 238 VAL n 4 239 CYS n 4 240 GLN n 4 241 LEU n 4 242 PRO n 4 243 SER n 4 244 LYS n 4 245 ASN n 4 246 ASP n 4 247 GLU n 4 248 LYS n 4 249 GLU n 4 250 TYR n 4 251 PRO n 4 252 HIS n 4 253 ARG n 4 254 ARG n 4 255 ILE n 4 256 ASP n 4 257 ILE n 4 258 ARG n 4 259 LEU n 4 260 ILE n 4 261 PRO n 4 262 LYS n 4 263 ASP n 4 264 GLN n 4 265 TYR n 4 266 TYR n 4 267 CYS n 4 268 GLY n 4 269 VAL n 4 270 LEU n 4 271 TYR n 4 272 PHE n 4 273 THR n 4 274 GLY n 4 275 SER n 4 276 ASP n 4 277 ILE n 4 278 PHE n 4 279 ASN n 4 280 LYS n 4 281 ASN n 4 282 MET n 4 283 ARG n 4 284 ALA n 4 285 HIS n 4 286 ALA n 4 287 LEU n 4 288 GLU n 4 289 LYS n 4 290 GLY n 4 291 PHE n 4 292 THR n 4 293 ILE n 4 294 ASN n 4 295 GLU n 4 296 TYR n 4 297 THR n 4 298 ILE n 4 299 ARG n 4 300 PRO n 4 301 LEU n 4 302 GLY n 4 303 VAL n 4 304 THR n 4 305 GLY n 4 306 VAL n 4 307 ALA n 4 308 GLY n 4 309 GLU n 4 310 PRO n 4 311 LEU n 4 312 PRO n 4 313 VAL n 4 314 ASP n 4 315 SER n 4 316 GLU n 4 317 LYS n 4 318 ASP n 4 319 ILE n 4 320 PHE n 4 321 ASP n 4 322 TYR n 4 323 ILE n 4 324 GLN n 4 325 TRP n 4 326 LYS n 4 327 TYR n 4 328 ARG n 4 329 GLU n 4 330 PRO n 4 331 LYS n 4 332 ASP n 4 333 ARG n 4 334 SER n 4 335 GLU n # _entity_src_gen.entity_id 4 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene POLB _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP DPOLB_HUMAN P06746 4 ;MSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATG KLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQD IVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQ LPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIF DYIQWKYREPKDRSE ; 1 ? 2 PDB 2PXI 2PXI 1 ? ? ? 3 PDB 2PXI 2PXI 2 ? ? ? 4 PDB 2PXI 2PXI 3 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2PXI A 1 ? 335 ? P06746 1 ? 335 ? 1 335 2 2 2PXI T 1 ? 16 ? 2PXI 1 ? 16 ? 1 16 3 3 2PXI P 1 ? 10 ? 2PXI 1 ? 10 ? 1 10 4 4 2PXI D 1 ? 5 ? 2PXI 1 ? 5 ? 1 5 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DOC 'DNA linking' n "2',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O6 P' 291.198 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GFH non-polymer . "2'-DEOXY-5'-O-[(R)-{[(R)-[(R)-FLUORO(PHOSPHONO)METHYL](HYDROXY)PHOSPHORYL]OXY}(HYDROXY)PHOSPHORYL]GUANOSINE" ? 'C11 H17 F N5 O12 P3' 523.199 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2PXI _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.23 _exptl_crystal.density_percent_sol 44.74 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details '50 mM Imidazole, 350 mM Sodium Acetate, PEG 3350 16%, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 291K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 Imidazole ? ? ? 1 2 1 'Sodium Acetate' ? ? ? 1 3 1 'PEG 3350' ? ? ? 1 4 1 H2O ? ? ? 1 5 2 Imidazole ? ? ? 1 6 2 'Sodium Acetate' ? ? ? 1 7 2 'PEG 3350' ? ? ? 1 8 2 H2O ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type RIGAKU _diffrn_detector.pdbx_collection_date 2005-05-26 _diffrn_detector.details Viramax # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU MICROMAX-007 HF' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 2PXI _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F -3 _reflns.d_resolution_low 50 _reflns.d_resolution_high 2.10 _reflns.number_obs 22466 _reflns.number_all 24711 _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs 0.119 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate 17.9 _reflns.pdbx_redundancy 3.6 _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.10 _reflns_shell.d_res_low 2.18 _reflns_shell.percent_possible_all 99.9 _reflns_shell.Rmerge_I_obs 0.445 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.0 _reflns_shell.pdbx_redundancy 3.6 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 2459 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 2PXI _refine.ls_number_reflns_obs 22466 _refine.ls_number_reflns_all 24711 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 236249.48 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 24.09 _refine.ls_d_res_high 2.10 _refine.ls_percent_reflns_obs 91.0 _refine.ls_R_factor_obs 0.206 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.206 _refine.ls_R_factor_R_free 0.27 _refine.ls_R_factor_R_free_error 0.006 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 9.9 _refine.ls_number_reflns_R_free 2221 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 32.2 _refine.aniso_B[1][1] 3.72 _refine.aniso_B[2][2] 0.86 _refine.aniso_B[3][3] -4.58 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 3.81 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.332987 _refine.solvent_model_param_bsol 47.6439 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 2FMP _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 2PXI _refine_analyze.Luzzati_coordinate_error_obs 0.26 _refine_analyze.Luzzati_sigma_a_obs 0.24 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.35 _refine_analyze.Luzzati_sigma_a_free 0.33 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2634 _refine_hist.pdbx_number_atoms_nucleic_acid 628 _refine_hist.pdbx_number_atoms_ligand 41 _refine_hist.number_atoms_solvent 321 _refine_hist.number_atoms_total 3624 _refine_hist.d_res_high 2.10 _refine_hist.d_res_low 24.09 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.005 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.1 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 24.0 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.95 ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 1.32 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 1.99 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 2.06 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 2.97 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.10 _refine_ls_shell.d_res_low 2.23 _refine_ls_shell.number_reflns_R_work 3372 _refine_ls_shell.R_factor_R_work 0.263 _refine_ls_shell.percent_reflns_obs 91.6 _refine_ls_shell.R_factor_R_free 0.326 _refine_ls_shell.R_factor_R_free_error 0.017 _refine_ls_shell.percent_reflns_R_free 10.0 _refine_ls_shell.number_reflns_R_free 376 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 2459 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 dGMPMF.param protein.top 'X-RAY DIFFRACTION' 2 ? dna-rna.top 'X-RAY DIFFRACTION' 3 ? water.top 'X-RAY DIFFRACTION' 4 ? dgf.top 'X-RAY DIFFRACTION' 5 ? dNTP.top 'X-RAY DIFFRACTION' # _struct.entry_id 2PXI _struct.title ;Ternary complex of DNA polymerase beta with a dideoxy terminated primer and 2'-deoxyguanosine 5'-beta, gamma-monofluoromethylene triphosphate ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2PXI _struct_keywords.pdbx_keywords 'LYASE, TRANSFERASE/DNA' _struct_keywords.text 'Nucleotidyl Transferase, DNA polymerase, chiral Interaction, stereoselectivity, LYASE, TRANSFERASE-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 6 ? H N N 6 ? I N N 7 ? J N N 7 ? K N N 7 ? L N N 7 ? M N N 7 ? N N N 8 ? O N N 9 ? P N N 9 ? Q N N 9 ? R N N 9 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN D 12 ? VAL D 29 ? ASN A 12 VAL A 29 1 ? 18 HELX_P HELX_P2 2 ALA D 32 ? LYS D 48 ? ALA A 32 LYS A 48 1 ? 17 HELX_P HELX_P3 3 SER D 55 ? LYS D 61 ? SER A 55 LYS A 61 1 ? 7 HELX_P HELX_P4 4 GLY D 66 ? GLY D 80 ? GLY A 66 GLY A 80 1 ? 15 HELX_P HELX_P5 5 LEU D 82 ? ASP D 91 ? LEU A 82 ASP A 91 1 ? 10 HELX_P HELX_P6 6 ASP D 91 ? THR D 101 ? ASP A 91 THR A 101 1 ? 11 HELX_P HELX_P7 7 GLY D 107 ? GLU D 117 ? GLY A 107 GLU A 117 1 ? 11 HELX_P HELX_P8 8 THR D 121 ? LYS D 127 ? THR A 121 LYS A 127 1 ? 7 HELX_P HELX_P9 9 ASN D 128 ? LEU D 132 ? ASN A 128 LEU A 132 5 ? 5 HELX_P HELX_P10 10 ASN D 133 ? TYR D 142 ? ASN A 133 TYR A 142 1 ? 10 HELX_P HELX_P11 11 GLY D 144 ? LYS D 148 ? GLY A 144 LYS A 148 5 ? 5 HELX_P HELX_P12 12 ARG D 152 ? ASP D 170 ? ARG A 152 ASP A 170 1 ? 19 HELX_P HELX_P13 13 CYS D 178 ? ARG D 183 ? CYS A 178 ARG A 183 1 ? 6 HELX_P HELX_P14 14 LYS D 209 ? VAL D 221 ? LYS A 209 VAL A 221 1 ? 13 HELX_P HELX_P15 15 PRO D 261 ? ASP D 263 ? PRO A 261 ASP A 263 5 ? 3 HELX_P HELX_P16 16 GLN D 264 ? GLY D 274 ? GLN A 264 GLY A 274 1 ? 11 HELX_P HELX_P17 17 SER D 275 ? LYS D 289 ? SER A 275 LYS A 289 1 ? 15 HELX_P HELX_P18 18 SER D 315 ? ILE D 323 ? SER A 315 ILE A 323 1 ? 9 HELX_P HELX_P19 19 GLU D 329 ? ARG D 333 ? GLU A 329 ARG A 333 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? D ASP 190 OD1 ? ? ? 1_555 E MG . MG ? ? A ASP 190 A MG 339 1_555 ? ? ? ? ? ? ? 1.976 ? ? metalc2 metalc ? ? D ASP 192 OD2 ? ? ? 1_555 E MG . MG ? ? A ASP 192 A MG 339 1_555 ? ? ? ? ? ? ? 2.169 ? ? hydrog1 hydrog ? ? A DC 1 N3 ? ? ? 1_555 C DG 5 N1 ? ? T DC 1 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DC 1 N4 ? ? ? 1_555 C DG 5 O6 ? ? T DC 1 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 1 O2 ? ? ? 1_555 C DG 5 N2 ? ? T DC 1 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DC 2 N3 ? ? ? 1_555 C DG 4 N1 ? ? T DC 2 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DC 2 N4 ? ? ? 1_555 C DG 4 O6 ? ? T DC 2 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 2 O2 ? ? ? 1_555 C DG 4 N2 ? ? T DC 2 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DG 3 N1 ? ? ? 1_555 C DC 3 O2 ? ? T DG 3 D DC 3 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? hydrog8 hydrog ? ? A DA 4 N1 ? ? ? 1_555 C DT 2 N3 ? ? T DA 4 D DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DA 4 N6 ? ? ? 1_555 C DT 2 O4 ? ? T DA 4 D DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DC 5 N3 ? ? ? 1_555 C DG 1 N1 ? ? T DC 5 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DC 5 N4 ? ? ? 1_555 C DG 1 O6 ? ? T DC 5 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DC 5 O2 ? ? ? 1_555 C DG 1 N2 ? ? T DC 5 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DG 7 N1 ? ? ? 1_555 B DOC 10 N3 ? ? T DG 7 P DOC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DG 7 N2 ? ? ? 1_555 B DOC 10 O2 ? ? T DG 7 P DOC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DG 7 O6 ? ? ? 1_555 B DOC 10 N4 ? ? T DG 7 P DOC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DC 8 N3 ? ? ? 1_555 B DG 9 N1 ? ? T DC 8 P DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DC 8 N4 ? ? ? 1_555 B DG 9 O6 ? ? T DC 8 P DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DC 8 O2 ? ? ? 1_555 B DG 9 N2 ? ? T DC 8 P DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DG 9 N1 ? ? ? 1_555 B DC 8 N3 ? ? T DG 9 P DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DG 9 N2 ? ? ? 1_555 B DC 8 O2 ? ? T DG 9 P DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DG 9 O6 ? ? ? 1_555 B DC 8 N4 ? ? T DG 9 P DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DC 10 N3 ? ? ? 1_555 B DG 7 N1 ? ? T DC 10 P DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DC 10 N4 ? ? ? 1_555 B DG 7 O6 ? ? T DC 10 P DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DC 10 O2 ? ? ? 1_555 B DG 7 N2 ? ? T DC 10 P DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DA 11 N1 ? ? ? 1_555 B DT 6 N3 ? ? T DA 11 P DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DA 11 N6 ? ? ? 1_555 B DT 6 O4 ? ? T DA 11 P DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DT 12 N3 ? ? ? 1_555 B DA 5 N1 ? ? T DT 12 P DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DT 12 O4 ? ? ? 1_555 B DA 5 N6 ? ? T DT 12 P DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DC 13 N3 ? ? ? 1_555 B DG 4 N1 ? ? T DC 13 P DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DC 13 N4 ? ? ? 1_555 B DG 4 O6 ? ? T DC 13 P DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DC 13 O2 ? ? ? 1_555 B DG 4 N2 ? ? T DC 13 P DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A DA 14 N1 ? ? ? 1_555 B DT 3 N3 ? ? T DA 14 P DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A DA 14 N6 ? ? ? 1_555 B DT 3 O4 ? ? T DA 14 P DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A DG 15 N1 ? ? ? 1_555 B DC 2 N3 ? ? T DG 15 P DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A DG 15 N2 ? ? ? 1_555 B DC 2 O2 ? ? T DG 15 P DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A DG 15 O6 ? ? ? 1_555 B DC 2 N4 ? ? T DG 15 P DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A DC 16 N3 ? ? ? 1_555 B DG 1 N1 ? ? T DC 16 P DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A DC 16 N4 ? ? ? 1_555 B DG 1 O6 ? ? T DC 16 P DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A DC 16 O2 ? ? ? 1_555 B DG 1 N2 ? ? T DC 16 P DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLY _struct_mon_prot_cis.label_seq_id 274 _struct_mon_prot_cis.label_asym_id D _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLY _struct_mon_prot_cis.auth_seq_id 274 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 SER _struct_mon_prot_cis.pdbx_label_seq_id_2 275 _struct_mon_prot_cis.pdbx_label_asym_id_2 D _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 SER _struct_mon_prot_cis.pdbx_auth_seq_id_2 275 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 0.38 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 5 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE D 150 ? PRO D 151 ? ILE A 150 PRO A 151 A 2 SER D 187 ? SER D 188 ? SER A 187 SER A 188 B 1 ILE D 174 ? VAL D 177 ? ILE A 174 VAL A 177 B 2 MET D 191 ? THR D 196 ? MET A 191 THR A 196 B 3 ARG D 253 ? LEU D 259 ? ARG A 253 LEU A 259 B 4 LYS D 234 ? CYS D 239 ? LYS A 234 CYS A 239 B 5 ILE D 224 ? LYS D 230 ? ILE A 224 LYS A 230 C 1 PHE D 291 ? ILE D 293 ? PHE A 291 ILE A 293 C 2 ILE D 298 ? PRO D 300 ? ILE A 298 PRO A 300 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE D 150 ? N ILE A 150 O SER D 188 ? O SER A 188 B 1 2 N THR D 176 ? N THR A 176 O LEU D 194 ? O LEU A 194 B 2 3 N LEU D 195 ? N LEU A 195 O ARG D 258 ? O ARG A 258 B 3 4 O ARG D 253 ? O ARG A 253 N CYS D 239 ? N CYS A 239 B 4 5 O MET D 236 ? O MET A 236 N SER D 229 ? N SER A 229 C 1 2 N THR D 292 ? N THR A 292 O ARG D 299 ? O ARG A 299 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MG 339 ? 5 'BINDING SITE FOR RESIDUE MG A 339' AC2 Software A NA 340 ? 6 'BINDING SITE FOR RESIDUE NA A 340' AC3 Software A NA 341 ? 6 'BINDING SITE FOR RESIDUE NA A 341' AC4 Software A NA 342 ? 5 'BINDING SITE FOR RESIDUE NA A 342' AC5 Software A CL 343 ? 5 'BINDING SITE FOR RESIDUE CL A 343' AC6 Software A CL 344 ? 3 'BINDING SITE FOR RESIDUE CL A 344' AC7 Software A CL 345 ? 3 'BINDING SITE FOR RESIDUE CL A 345' AC8 Software A CL 346 ? 3 'BINDING SITE FOR RESIDUE CL A 346' AC9 Software A CL 347 ? 2 'BINDING SITE FOR RESIDUE CL A 347' BC1 Software A GFH 338 ? 26 'BINDING SITE FOR RESIDUE GFH A 338' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 ASP D 190 ? ASP A 190 . ? 1_555 ? 2 AC1 5 ASP D 192 ? ASP A 192 . ? 1_555 ? 3 AC1 5 GFH N . ? GFH A 338 . ? 1_555 ? 4 AC1 5 NA F . ? NA A 340 . ? 1_555 ? 5 AC1 5 HOH R . ? HOH A 348 . ? 1_555 ? 6 AC2 6 ASP D 190 ? ASP A 190 . ? 1_555 ? 7 AC2 6 ASP D 192 ? ASP A 192 . ? 1_555 ? 8 AC2 6 ASP D 256 ? ASP A 256 . ? 1_555 ? 9 AC2 6 GFH N . ? GFH A 338 . ? 1_555 ? 10 AC2 6 MG E . ? MG A 339 . ? 1_555 ? 11 AC2 6 DOC B 10 ? DOC P 10 . ? 1_555 ? 12 AC3 6 THR D 101 ? THR A 101 . ? 1_555 ? 13 AC3 6 VAL D 103 ? VAL A 103 . ? 1_555 ? 14 AC3 6 ILE D 106 ? ILE A 106 . ? 1_555 ? 15 AC3 6 HOH R . ? HOH A 484 . ? 1_555 ? 16 AC3 6 DG B 9 ? DG P 9 . ? 1_555 ? 17 AC3 6 HOH P . ? HOH P 11 . ? 1_555 ? 18 AC4 5 LYS D 60 ? LYS A 60 . ? 1_555 ? 19 AC4 5 LEU D 62 ? LEU A 62 . ? 1_555 ? 20 AC4 5 VAL D 65 ? VAL A 65 . ? 1_555 ? 21 AC4 5 HOH R . ? HOH A 380 . ? 1_555 ? 22 AC4 5 DC C 3 ? DC D 3 . ? 1_555 ? 23 AC5 5 GLN D 264 ? GLN A 264 . ? 1_555 ? 24 AC5 5 TYR D 266 ? TYR A 266 . ? 1_555 ? 25 AC5 5 CYS D 267 ? CYS A 267 . ? 1_555 ? 26 AC5 5 VAL D 313 ? VAL A 313 . ? 1_555 ? 27 AC5 5 HOH R . ? HOH A 456 . ? 1_555 ? 28 AC6 3 ALA D 32 ? ALA A 32 . ? 1_555 ? 29 AC6 3 HIS D 34 ? HIS A 34 . ? 1_555 ? 30 AC6 3 LYS D 35 ? LYS A 35 . ? 1_555 ? 31 AC7 3 LYS D 81 ? LYS A 81 . ? 1_555 ? 32 AC7 3 LEU D 82 ? LEU A 82 . ? 1_555 ? 33 AC7 3 ARG D 89 ? ARG A 89 . ? 1_555 ? 34 AC8 3 ASN D 294 ? ASN A 294 . ? 1_555 ? 35 AC8 3 THR D 297 ? THR A 297 . ? 1_555 ? 36 AC8 3 ARG D 299 ? ARG A 299 . ? 1_555 ? 37 AC9 2 PRO D 330 ? PRO A 330 . ? 1_555 ? 38 AC9 2 LYS D 331 ? LYS A 331 . ? 1_555 ? 39 BC1 26 GLY D 179 ? GLY A 179 . ? 1_555 ? 40 BC1 26 SER D 180 ? SER A 180 . ? 1_555 ? 41 BC1 26 ARG D 183 ? ARG A 183 . ? 1_555 ? 42 BC1 26 SER D 188 ? SER A 188 . ? 1_555 ? 43 BC1 26 GLY D 189 ? GLY A 189 . ? 1_555 ? 44 BC1 26 ASP D 190 ? ASP A 190 . ? 1_555 ? 45 BC1 26 ASP D 192 ? ASP A 192 . ? 1_555 ? 46 BC1 26 TYR D 271 ? TYR A 271 . ? 1_555 ? 47 BC1 26 PHE D 272 ? PHE A 272 . ? 1_555 ? 48 BC1 26 THR D 273 ? THR A 273 . ? 1_555 ? 49 BC1 26 GLY D 274 ? GLY A 274 . ? 1_555 ? 50 BC1 26 ASP D 276 ? ASP A 276 . ? 1_555 ? 51 BC1 26 ASN D 279 ? ASN A 279 . ? 1_555 ? 52 BC1 26 ARG D 283 ? ARG A 283 . ? 1_555 ? 53 BC1 26 MG E . ? MG A 339 . ? 1_555 ? 54 BC1 26 NA F . ? NA A 340 . ? 1_555 ? 55 BC1 26 HOH R . ? HOH A 348 . ? 1_555 ? 56 BC1 26 HOH R . ? HOH A 350 . ? 1_555 ? 57 BC1 26 HOH R . ? HOH A 374 . ? 1_555 ? 58 BC1 26 HOH R . ? HOH A 386 . ? 1_555 ? 59 BC1 26 HOH R . ? HOH A 394 . ? 1_555 ? 60 BC1 26 HOH R . ? HOH A 400 . ? 1_555 ? 61 BC1 26 HOH R . ? HOH A 447 . ? 1_555 ? 62 BC1 26 DOC B 10 ? DOC P 10 . ? 1_555 ? 63 BC1 26 DC A 6 ? DC T 6 . ? 1_555 ? 64 BC1 26 DG A 7 ? DG T 7 . ? 1_555 ? # _database_PDB_matrix.entry_id 2PXI _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2PXI _atom_sites.fract_transf_matrix[1][1] 0.019763 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.006345 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012469 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.018958 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL F MG N NA O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 1 DC C T . n A 1 2 DC 2 2 2 DC C T . n A 1 3 DG 3 3 3 DG G T . n A 1 4 DA 4 4 4 DA A T . n A 1 5 DC 5 5 5 DC C T . n A 1 6 DC 6 6 6 DC C T . n A 1 7 DG 7 7 7 DG G T . n A 1 8 DC 8 8 8 DC C T . n A 1 9 DG 9 9 9 DG G T . n A 1 10 DC 10 10 10 DC C T . n A 1 11 DA 11 11 11 DA A T . n A 1 12 DT 12 12 12 DT T T . n A 1 13 DC 13 13 13 DC C T . n A 1 14 DA 14 14 14 DA A T . n A 1 15 DG 15 15 15 DG G T . n A 1 16 DC 16 16 16 DC C T . n B 2 1 DG 1 1 1 DG G P . n B 2 2 DC 2 2 2 DC C P . n B 2 3 DT 3 3 3 DT T P . n B 2 4 DG 4 4 4 DG G P . n B 2 5 DA 5 5 5 DA A P . n B 2 6 DT 6 6 6 DT T P . n B 2 7 DG 7 7 7 DG G P . n B 2 8 DC 8 8 8 DC C P . n B 2 9 DG 9 9 9 DG G P . n B 2 10 DOC 10 10 10 DOC DOC P . n C 3 1 DG 1 1 1 DG G D . n C 3 2 DT 2 2 2 DT T D . n C 3 3 DC 3 3 3 DC C D . n C 3 4 DG 4 4 4 DG G D . n C 3 5 DG 5 5 5 DG G D . n D 4 1 MET 1 1 ? ? ? A . n D 4 2 SER 2 2 ? ? ? A . n D 4 3 LYS 3 3 ? ? ? A . n D 4 4 ARG 4 4 ? ? ? A . n D 4 5 LYS 5 5 ? ? ? A . n D 4 6 ALA 6 6 ? ? ? A . n D 4 7 PRO 7 7 ? ? ? A . n D 4 8 GLN 8 8 ? ? ? A . n D 4 9 GLU 9 9 ? ? ? A . n D 4 10 THR 10 10 10 THR THR A . n D 4 11 LEU 11 11 11 LEU LEU A . n D 4 12 ASN 12 12 12 ASN ASN A . n D 4 13 GLY 13 13 13 GLY GLY A . n D 4 14 GLY 14 14 14 GLY GLY A . n D 4 15 ILE 15 15 15 ILE ILE A . n D 4 16 THR 16 16 16 THR THR A . n D 4 17 ASP 17 17 17 ASP ASP A . n D 4 18 MET 18 18 18 MET MET A . n D 4 19 LEU 19 19 19 LEU LEU A . n D 4 20 THR 20 20 20 THR THR A . n D 4 21 GLU 21 21 21 GLU GLU A . n D 4 22 LEU 22 22 22 LEU LEU A . n D 4 23 ALA 23 23 23 ALA ALA A . n D 4 24 ASN 24 24 24 ASN ASN A . n D 4 25 PHE 25 25 25 PHE PHE A . n D 4 26 GLU 26 26 26 GLU GLU A . n D 4 27 LYS 27 27 27 LYS LYS A . n D 4 28 ASN 28 28 28 ASN ASN A . n D 4 29 VAL 29 29 29 VAL VAL A . n D 4 30 SER 30 30 30 SER SER A . n D 4 31 GLN 31 31 31 GLN GLN A . n D 4 32 ALA 32 32 32 ALA ALA A . n D 4 33 ILE 33 33 33 ILE ILE A . n D 4 34 HIS 34 34 34 HIS HIS A . n D 4 35 LYS 35 35 35 LYS LYS A . n D 4 36 TYR 36 36 36 TYR TYR A . n D 4 37 ASN 37 37 37 ASN ASN A . n D 4 38 ALA 38 38 38 ALA ALA A . n D 4 39 TYR 39 39 39 TYR TYR A . n D 4 40 ARG 40 40 40 ARG ARG A . n D 4 41 LYS 41 41 41 LYS LYS A . n D 4 42 ALA 42 42 42 ALA ALA A . n D 4 43 ALA 43 43 43 ALA ALA A . n D 4 44 SER 44 44 44 SER SER A . n D 4 45 VAL 45 45 45 VAL VAL A . n D 4 46 ILE 46 46 46 ILE ILE A . n D 4 47 ALA 47 47 47 ALA ALA A . n D 4 48 LYS 48 48 48 LYS LYS A . n D 4 49 TYR 49 49 49 TYR TYR A . n D 4 50 PRO 50 50 50 PRO PRO A . n D 4 51 HIS 51 51 51 HIS HIS A . n D 4 52 LYS 52 52 52 LYS LYS A . n D 4 53 ILE 53 53 53 ILE ILE A . n D 4 54 LYS 54 54 54 LYS LYS A . n D 4 55 SER 55 55 55 SER SER A . n D 4 56 GLY 56 56 56 GLY GLY A . n D 4 57 ALA 57 57 57 ALA ALA A . n D 4 58 GLU 58 58 58 GLU GLU A . n D 4 59 ALA 59 59 59 ALA ALA A . n D 4 60 LYS 60 60 60 LYS LYS A . n D 4 61 LYS 61 61 61 LYS LYS A . n D 4 62 LEU 62 62 62 LEU LEU A . n D 4 63 PRO 63 63 63 PRO PRO A . n D 4 64 GLY 64 64 64 GLY GLY A . n D 4 65 VAL 65 65 65 VAL VAL A . n D 4 66 GLY 66 66 66 GLY GLY A . n D 4 67 THR 67 67 67 THR THR A . n D 4 68 LYS 68 68 68 LYS LYS A . n D 4 69 ILE 69 69 69 ILE ILE A . n D 4 70 ALA 70 70 70 ALA ALA A . n D 4 71 GLU 71 71 71 GLU GLU A . n D 4 72 LYS 72 72 72 LYS LYS A . n D 4 73 ILE 73 73 73 ILE ILE A . n D 4 74 ASP 74 74 74 ASP ASP A . n D 4 75 GLU 75 75 75 GLU GLU A . n D 4 76 PHE 76 76 76 PHE PHE A . n D 4 77 LEU 77 77 77 LEU LEU A . n D 4 78 ALA 78 78 78 ALA ALA A . n D 4 79 THR 79 79 79 THR THR A . n D 4 80 GLY 80 80 80 GLY GLY A . n D 4 81 LYS 81 81 81 LYS LYS A . n D 4 82 LEU 82 82 82 LEU LEU A . n D 4 83 ARG 83 83 83 ARG ARG A . n D 4 84 LYS 84 84 84 LYS LYS A . n D 4 85 LEU 85 85 85 LEU LEU A . n D 4 86 GLU 86 86 86 GLU GLU A . n D 4 87 LYS 87 87 87 LYS LYS A . n D 4 88 ILE 88 88 88 ILE ILE A . n D 4 89 ARG 89 89 89 ARG ARG A . n D 4 90 GLN 90 90 90 GLN GLN A . n D 4 91 ASP 91 91 91 ASP ASP A . n D 4 92 ASP 92 92 92 ASP ASP A . n D 4 93 THR 93 93 93 THR THR A . n D 4 94 SER 94 94 94 SER SER A . n D 4 95 SER 95 95 95 SER SER A . n D 4 96 SER 96 96 96 SER SER A . n D 4 97 ILE 97 97 97 ILE ILE A . n D 4 98 ASN 98 98 98 ASN ASN A . n D 4 99 PHE 99 99 99 PHE PHE A . n D 4 100 LEU 100 100 100 LEU LEU A . n D 4 101 THR 101 101 101 THR THR A . n D 4 102 ARG 102 102 102 ARG ARG A . n D 4 103 VAL 103 103 103 VAL VAL A . n D 4 104 SER 104 104 104 SER SER A . n D 4 105 GLY 105 105 105 GLY GLY A . n D 4 106 ILE 106 106 106 ILE ILE A . n D 4 107 GLY 107 107 107 GLY GLY A . n D 4 108 PRO 108 108 108 PRO PRO A . n D 4 109 SER 109 109 109 SER SER A . n D 4 110 ALA 110 110 110 ALA ALA A . n D 4 111 ALA 111 111 111 ALA ALA A . n D 4 112 ARG 112 112 112 ARG ARG A . n D 4 113 LYS 113 113 113 LYS LYS A . n D 4 114 PHE 114 114 114 PHE PHE A . n D 4 115 VAL 115 115 115 VAL VAL A . n D 4 116 ASP 116 116 116 ASP ASP A . n D 4 117 GLU 117 117 117 GLU GLU A . n D 4 118 GLY 118 118 118 GLY GLY A . n D 4 119 ILE 119 119 119 ILE ILE A . n D 4 120 LYS 120 120 120 LYS LYS A . n D 4 121 THR 121 121 121 THR THR A . n D 4 122 LEU 122 122 122 LEU LEU A . n D 4 123 GLU 123 123 123 GLU ALA A . n D 4 124 ASP 124 124 124 ASP ASP A . n D 4 125 LEU 125 125 125 LEU LEU A . n D 4 126 ARG 126 126 126 ARG ARG A . n D 4 127 LYS 127 127 127 LYS LYS A . n D 4 128 ASN 128 128 128 ASN ASN A . n D 4 129 GLU 129 129 129 GLU GLU A . n D 4 130 ASP 130 130 130 ASP ASP A . n D 4 131 LYS 131 131 131 LYS LYS A . n D 4 132 LEU 132 132 132 LEU LEU A . n D 4 133 ASN 133 133 133 ASN ASN A . n D 4 134 HIS 134 134 134 HIS HIS A . n D 4 135 HIS 135 135 135 HIS HIS A . n D 4 136 GLN 136 136 136 GLN GLN A . n D 4 137 ARG 137 137 137 ARG ARG A . n D 4 138 ILE 138 138 138 ILE ILE A . n D 4 139 GLY 139 139 139 GLY GLY A . n D 4 140 LEU 140 140 140 LEU LEU A . n D 4 141 LYS 141 141 141 LYS LYS A . n D 4 142 TYR 142 142 142 TYR TYR A . n D 4 143 PHE 143 143 143 PHE PHE A . n D 4 144 GLY 144 144 144 GLY GLY A . n D 4 145 ASP 145 145 145 ASP ASP A . n D 4 146 PHE 146 146 146 PHE PHE A . n D 4 147 GLU 147 147 147 GLU GLU A . n D 4 148 LYS 148 148 148 LYS LYS A . n D 4 149 ARG 149 149 149 ARG ARG A . n D 4 150 ILE 150 150 150 ILE ILE A . n D 4 151 PRO 151 151 151 PRO PRO A . n D 4 152 ARG 152 152 152 ARG ARG A . n D 4 153 GLU 153 153 153 GLU GLU A . n D 4 154 GLU 154 154 154 GLU GLU A . n D 4 155 MET 155 155 155 MET MET A . n D 4 156 LEU 156 156 156 LEU LEU A . n D 4 157 GLN 157 157 157 GLN GLN A . n D 4 158 MET 158 158 158 MET MET A . n D 4 159 GLN 159 159 159 GLN GLN A . n D 4 160 ASP 160 160 160 ASP ASP A . n D 4 161 ILE 161 161 161 ILE ILE A . n D 4 162 VAL 162 162 162 VAL VAL A . n D 4 163 LEU 163 163 163 LEU LEU A . n D 4 164 ASN 164 164 164 ASN ASN A . n D 4 165 GLU 165 165 165 GLU GLU A . n D 4 166 VAL 166 166 166 VAL VAL A . n D 4 167 LYS 167 167 167 LYS LYS A . n D 4 168 LYS 168 168 168 LYS LYS A . n D 4 169 VAL 169 169 169 VAL VAL A . n D 4 170 ASP 170 170 170 ASP ASP A . n D 4 171 SER 171 171 171 SER SER A . n D 4 172 GLU 172 172 172 GLU GLU A . n D 4 173 TYR 173 173 173 TYR TYR A . n D 4 174 ILE 174 174 174 ILE ILE A . n D 4 175 ALA 175 175 175 ALA ALA A . n D 4 176 THR 176 176 176 THR THR A . n D 4 177 VAL 177 177 177 VAL VAL A . n D 4 178 CYS 178 178 178 CYS CYS A . n D 4 179 GLY 179 179 179 GLY GLY A . n D 4 180 SER 180 180 180 SER SER A . n D 4 181 PHE 181 181 181 PHE PHE A . n D 4 182 ARG 182 182 182 ARG ARG A . n D 4 183 ARG 183 183 183 ARG ARG A . n D 4 184 GLY 184 184 184 GLY GLY A . n D 4 185 ALA 185 185 185 ALA ALA A . n D 4 186 GLU 186 186 186 GLU GLU A . n D 4 187 SER 187 187 187 SER SER A . n D 4 188 SER 188 188 188 SER SER A . n D 4 189 GLY 189 189 189 GLY GLY A . n D 4 190 ASP 190 190 190 ASP ASP A . n D 4 191 MET 191 191 191 MET MET A . n D 4 192 ASP 192 192 192 ASP ASP A . n D 4 193 VAL 193 193 193 VAL VAL A . n D 4 194 LEU 194 194 194 LEU LEU A . n D 4 195 LEU 195 195 195 LEU LEU A . n D 4 196 THR 196 196 196 THR THR A . n D 4 197 HIS 197 197 197 HIS HIS A . n D 4 198 PRO 198 198 198 PRO PRO A . n D 4 199 SER 199 199 199 SER SER A . n D 4 200 PHE 200 200 200 PHE PHE A . n D 4 201 THR 201 201 201 THR THR A . n D 4 202 SER 202 202 202 SER SER A . n D 4 203 GLU 203 203 203 GLU GLU A . n D 4 204 SER 204 204 204 SER SER A . n D 4 205 THR 205 205 205 THR THR A . n D 4 206 LYS 206 206 206 LYS LYS A . n D 4 207 GLN 207 207 207 GLN GLN A . n D 4 208 PRO 208 208 208 PRO PRO A . n D 4 209 LYS 209 209 209 LYS LYS A . n D 4 210 LEU 210 210 210 LEU LEU A . n D 4 211 LEU 211 211 211 LEU LEU A . n D 4 212 HIS 212 212 212 HIS HIS A . n D 4 213 GLN 213 213 213 GLN GLN A . n D 4 214 VAL 214 214 214 VAL VAL A . n D 4 215 VAL 215 215 215 VAL VAL A . n D 4 216 GLU 216 216 216 GLU GLU A . n D 4 217 GLN 217 217 217 GLN GLN A . n D 4 218 LEU 218 218 218 LEU LEU A . n D 4 219 GLN 219 219 219 GLN GLN A . n D 4 220 LYS 220 220 220 LYS LYS A . n D 4 221 VAL 221 221 221 VAL VAL A . n D 4 222 HIS 222 222 222 HIS HIS A . n D 4 223 PHE 223 223 223 PHE PHE A . n D 4 224 ILE 224 224 224 ILE ILE A . n D 4 225 THR 225 225 225 THR THR A . n D 4 226 ASP 226 226 226 ASP ASP A . n D 4 227 THR 227 227 227 THR THR A . n D 4 228 LEU 228 228 228 LEU LEU A . n D 4 229 SER 229 229 229 SER SER A . n D 4 230 LYS 230 230 230 LYS LYS A . n D 4 231 GLY 231 231 231 GLY GLY A . n D 4 232 GLU 232 232 232 GLU GLU A . n D 4 233 THR 233 233 233 THR THR A . n D 4 234 LYS 234 234 234 LYS LYS A . n D 4 235 PHE 235 235 235 PHE PHE A . n D 4 236 MET 236 236 236 MET MET A . n D 4 237 GLY 237 237 237 GLY GLY A . n D 4 238 VAL 238 238 238 VAL VAL A . n D 4 239 CYS 239 239 239 CYS CYS A . n D 4 240 GLN 240 240 240 GLN GLN A . n D 4 241 LEU 241 241 241 LEU LEU A . n D 4 242 PRO 242 242 242 PRO PRO A . n D 4 243 SER 243 243 243 SER SER A . n D 4 244 LYS 244 244 244 LYS LYS A . n D 4 245 ASN 245 245 245 ASN ASN A . n D 4 246 ASP 246 246 246 ASP ASP A . n D 4 247 GLU 247 247 247 GLU GLU A . n D 4 248 LYS 248 248 248 LYS LYS A . n D 4 249 GLU 249 249 249 GLU GLU A . n D 4 250 TYR 250 250 250 TYR TYR A . n D 4 251 PRO 251 251 251 PRO PRO A . n D 4 252 HIS 252 252 252 HIS HIS A . n D 4 253 ARG 253 253 253 ARG ARG A . n D 4 254 ARG 254 254 254 ARG ARG A . n D 4 255 ILE 255 255 255 ILE ILE A . n D 4 256 ASP 256 256 256 ASP ASP A . n D 4 257 ILE 257 257 257 ILE ILE A . n D 4 258 ARG 258 258 258 ARG ARG A . n D 4 259 LEU 259 259 259 LEU LEU A . n D 4 260 ILE 260 260 260 ILE ILE A . n D 4 261 PRO 261 261 261 PRO PRO A . n D 4 262 LYS 262 262 262 LYS LYS A . n D 4 263 ASP 263 263 263 ASP ASP A . n D 4 264 GLN 264 264 264 GLN GLN A . n D 4 265 TYR 265 265 265 TYR TYR A . n D 4 266 TYR 266 266 266 TYR TYR A . n D 4 267 CYS 267 267 267 CYS CYS A . n D 4 268 GLY 268 268 268 GLY GLY A . n D 4 269 VAL 269 269 269 VAL VAL A . n D 4 270 LEU 270 270 270 LEU LEU A . n D 4 271 TYR 271 271 271 TYR TYR A . n D 4 272 PHE 272 272 272 PHE PHE A . n D 4 273 THR 273 273 273 THR THR A . n D 4 274 GLY 274 274 274 GLY GLY A . n D 4 275 SER 275 275 275 SER SER A . n D 4 276 ASP 276 276 276 ASP ASP A . n D 4 277 ILE 277 277 277 ILE ILE A . n D 4 278 PHE 278 278 278 PHE PHE A . n D 4 279 ASN 279 279 279 ASN ASN A . n D 4 280 LYS 280 280 280 LYS LYS A . n D 4 281 ASN 281 281 281 ASN ASN A . n D 4 282 MET 282 282 282 MET MET A . n D 4 283 ARG 283 283 283 ARG ARG A . n D 4 284 ALA 284 284 284 ALA ALA A . n D 4 285 HIS 285 285 285 HIS HIS A . n D 4 286 ALA 286 286 286 ALA ALA A . n D 4 287 LEU 287 287 287 LEU LEU A . n D 4 288 GLU 288 288 288 GLU GLU A . n D 4 289 LYS 289 289 289 LYS LYS A . n D 4 290 GLY 290 290 290 GLY GLY A . n D 4 291 PHE 291 291 291 PHE PHE A . n D 4 292 THR 292 292 292 THR THR A . n D 4 293 ILE 293 293 293 ILE ILE A . n D 4 294 ASN 294 294 294 ASN ASN A . n D 4 295 GLU 295 295 295 GLU GLU A . n D 4 296 TYR 296 296 296 TYR TYR A . n D 4 297 THR 297 297 297 THR THR A . n D 4 298 ILE 298 298 298 ILE ILE A . n D 4 299 ARG 299 299 299 ARG ARG A . n D 4 300 PRO 300 300 300 PRO PRO A . n D 4 301 LEU 301 301 301 LEU LEU A . n D 4 302 GLY 302 302 302 GLY GLY A . n D 4 303 VAL 303 303 303 VAL VAL A . n D 4 304 THR 304 304 304 THR THR A . n D 4 305 GLY 305 305 305 GLY GLY A . n D 4 306 VAL 306 306 306 VAL VAL A . n D 4 307 ALA 307 307 307 ALA ALA A . n D 4 308 GLY 308 308 308 GLY GLY A . n D 4 309 GLU 309 309 309 GLU GLU A . n D 4 310 PRO 310 310 310 PRO PRO A . n D 4 311 LEU 311 311 311 LEU LEU A . n D 4 312 PRO 312 312 312 PRO PRO A . n D 4 313 VAL 313 313 313 VAL VAL A . n D 4 314 ASP 314 314 314 ASP ASP A . n D 4 315 SER 315 315 315 SER SER A . n D 4 316 GLU 316 316 316 GLU GLU A . n D 4 317 LYS 317 317 317 LYS LYS A . n D 4 318 ASP 318 318 318 ASP ASP A . n D 4 319 ILE 319 319 319 ILE ILE A . n D 4 320 PHE 320 320 320 PHE PHE A . n D 4 321 ASP 321 321 321 ASP ASP A . n D 4 322 TYR 322 322 322 TYR TYR A . n D 4 323 ILE 323 323 323 ILE ILE A . n D 4 324 GLN 324 324 324 GLN GLN A . n D 4 325 TRP 325 325 325 TRP TRP A . n D 4 326 LYS 326 326 326 LYS LYS A . n D 4 327 TYR 327 327 327 TYR TYR A . n D 4 328 ARG 328 328 328 ARG ARG A . n D 4 329 GLU 329 329 329 GLU GLU A . n D 4 330 PRO 330 330 330 PRO PRO A . n D 4 331 LYS 331 331 331 LYS LYS A . n D 4 332 ASP 332 332 332 ASP ASP A . n D 4 333 ARG 333 333 333 ARG ARG A . n D 4 334 SER 334 334 334 SER SER A . n D 4 335 GLU 335 335 335 GLU GLU A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 MG 1 339 339 MG MG A . F 6 NA 1 340 340 NA NA A . G 6 NA 1 341 341 NA NA A . H 6 NA 1 342 342 NA NA A . I 7 CL 1 343 343 CL CL A . J 7 CL 1 344 344 CL CL A . K 7 CL 1 345 345 CL CL A . L 7 CL 1 346 346 CL CL A . M 7 CL 1 347 347 CL CL A . N 8 GFH 1 338 338 GFH GFH A . O 9 HOH 1 17 2 HOH HOH T . O 9 HOH 2 18 41 HOH HOH T . O 9 HOH 3 19 55 HOH HOH T . O 9 HOH 4 20 61 HOH HOH T . O 9 HOH 5 21 71 HOH HOH T . O 9 HOH 6 22 77 HOH HOH T . O 9 HOH 7 23 100 HOH HOH T . O 9 HOH 8 24 106 HOH HOH T . O 9 HOH 9 25 108 HOH HOH T . O 9 HOH 10 26 121 HOH HOH T . O 9 HOH 11 27 148 HOH HOH T . O 9 HOH 12 28 170 HOH HOH T . O 9 HOH 13 29 179 HOH HOH T . O 9 HOH 14 30 180 HOH HOH T . O 9 HOH 15 31 183 HOH HOH T . O 9 HOH 16 32 206 HOH HOH T . O 9 HOH 17 33 209 HOH HOH T . O 9 HOH 18 34 213 HOH HOH T . O 9 HOH 19 35 214 HOH HOH T . O 9 HOH 20 36 215 HOH HOH T . O 9 HOH 21 37 216 HOH HOH T . O 9 HOH 22 38 221 HOH HOH T . O 9 HOH 23 39 222 HOH HOH T . O 9 HOH 24 40 223 HOH HOH T . O 9 HOH 25 41 234 HOH HOH T . O 9 HOH 26 42 241 HOH HOH T . O 9 HOH 27 43 280 HOH HOH T . O 9 HOH 28 44 296 HOH HOH T . O 9 HOH 29 45 299 HOH HOH T . O 9 HOH 30 46 306 HOH HOH T . O 9 HOH 31 47 307 HOH HOH T . O 9 HOH 32 48 308 HOH HOH T . O 9 HOH 33 49 309 HOH HOH T . O 9 HOH 34 50 310 HOH HOH T . O 9 HOH 35 51 311 HOH HOH T . O 9 HOH 36 52 313 HOH HOH T . O 9 HOH 37 53 314 HOH HOH T . O 9 HOH 38 54 318 HOH HOH T . O 9 HOH 39 55 811 HOH HOH T . O 9 HOH 40 56 812 HOH HOH T . P 9 HOH 1 11 35 HOH HOH P . P 9 HOH 2 12 68 HOH HOH P . P 9 HOH 3 13 88 HOH HOH P . P 9 HOH 4 14 109 HOH HOH P . P 9 HOH 5 15 117 HOH HOH P . P 9 HOH 6 16 122 HOH HOH P . P 9 HOH 7 17 178 HOH HOH P . P 9 HOH 8 18 186 HOH HOH P . P 9 HOH 9 19 205 HOH HOH P . P 9 HOH 10 20 207 HOH HOH P . P 9 HOH 11 21 227 HOH HOH P . P 9 HOH 12 22 240 HOH HOH P . P 9 HOH 13 23 277 HOH HOH P . Q 9 HOH 1 6 49 HOH HOH D . Q 9 HOH 2 7 76 HOH HOH D . Q 9 HOH 3 8 82 HOH HOH D . Q 9 HOH 4 9 169 HOH HOH D . Q 9 HOH 5 10 326 HOH HOH D . Q 9 HOH 6 11 407 HOH HOH D . Q 9 HOH 7 12 408 HOH HOH D . R 9 HOH 1 348 1 HOH HOH A . R 9 HOH 2 349 5 HOH HOH A . R 9 HOH 3 350 6 HOH HOH A . R 9 HOH 4 351 7 HOH HOH A . R 9 HOH 5 352 8 HOH HOH A . R 9 HOH 6 353 9 HOH HOH A . R 9 HOH 7 354 10 HOH HOH A . R 9 HOH 8 355 11 HOH HOH A . R 9 HOH 9 356 12 HOH HOH A . R 9 HOH 10 357 13 HOH HOH A . R 9 HOH 11 358 14 HOH HOH A . R 9 HOH 12 359 15 HOH HOH A . R 9 HOH 13 360 16 HOH HOH A . R 9 HOH 14 361 17 HOH HOH A . R 9 HOH 15 362 18 HOH HOH A . R 9 HOH 16 363 19 HOH HOH A . R 9 HOH 17 364 20 HOH HOH A . R 9 HOH 18 365 21 HOH HOH A . R 9 HOH 19 366 22 HOH HOH A . R 9 HOH 20 367 23 HOH HOH A . R 9 HOH 21 368 24 HOH HOH A . R 9 HOH 22 369 25 HOH HOH A . R 9 HOH 23 370 26 HOH HOH A . R 9 HOH 24 371 27 HOH HOH A . R 9 HOH 25 372 28 HOH HOH A . R 9 HOH 26 373 29 HOH HOH A . R 9 HOH 27 374 30 HOH HOH A . R 9 HOH 28 375 31 HOH HOH A . R 9 HOH 29 376 32 HOH HOH A . R 9 HOH 30 377 33 HOH HOH A . R 9 HOH 31 378 34 HOH HOH A . R 9 HOH 32 379 36 HOH HOH A . R 9 HOH 33 380 37 HOH HOH A . R 9 HOH 34 381 38 HOH HOH A . R 9 HOH 35 382 39 HOH HOH A . R 9 HOH 36 383 40 HOH HOH A . R 9 HOH 37 384 42 HOH HOH A . R 9 HOH 38 385 43 HOH HOH A . R 9 HOH 39 386 44 HOH HOH A . R 9 HOH 40 387 45 HOH HOH A . R 9 HOH 41 388 46 HOH HOH A . R 9 HOH 42 389 47 HOH HOH A . R 9 HOH 43 390 48 HOH HOH A . R 9 HOH 44 391 50 HOH HOH A . R 9 HOH 45 392 51 HOH HOH A . R 9 HOH 46 393 52 HOH HOH A . R 9 HOH 47 394 53 HOH HOH A . R 9 HOH 48 395 54 HOH HOH A . R 9 HOH 49 396 56 HOH HOH A . R 9 HOH 50 397 57 HOH HOH A . R 9 HOH 51 398 58 HOH HOH A . R 9 HOH 52 399 59 HOH HOH A . R 9 HOH 53 400 60 HOH HOH A . R 9 HOH 54 401 62 HOH HOH A . R 9 HOH 55 402 63 HOH HOH A . R 9 HOH 56 403 64 HOH HOH A . R 9 HOH 57 404 65 HOH HOH A . R 9 HOH 58 405 66 HOH HOH A . R 9 HOH 59 406 67 HOH HOH A . R 9 HOH 60 407 69 HOH HOH A . R 9 HOH 61 408 70 HOH HOH A . R 9 HOH 62 409 72 HOH HOH A . R 9 HOH 63 410 73 HOH HOH A . R 9 HOH 64 411 74 HOH HOH A . R 9 HOH 65 412 78 HOH HOH A . R 9 HOH 66 413 79 HOH HOH A . R 9 HOH 67 414 80 HOH HOH A . R 9 HOH 68 415 81 HOH HOH A . R 9 HOH 69 416 83 HOH HOH A . R 9 HOH 70 417 84 HOH HOH A . R 9 HOH 71 418 85 HOH HOH A . R 9 HOH 72 419 86 HOH HOH A . R 9 HOH 73 420 87 HOH HOH A . R 9 HOH 74 421 89 HOH HOH A . R 9 HOH 75 422 90 HOH HOH A . R 9 HOH 76 423 91 HOH HOH A . R 9 HOH 77 424 92 HOH HOH A . R 9 HOH 78 425 93 HOH HOH A . R 9 HOH 79 426 94 HOH HOH A . R 9 HOH 80 427 95 HOH HOH A . R 9 HOH 81 428 96 HOH HOH A . R 9 HOH 82 429 97 HOH HOH A . R 9 HOH 83 430 98 HOH HOH A . R 9 HOH 84 431 99 HOH HOH A . R 9 HOH 85 432 101 HOH HOH A . R 9 HOH 86 433 102 HOH HOH A . R 9 HOH 87 434 103 HOH HOH A . R 9 HOH 88 435 104 HOH HOH A . R 9 HOH 89 436 107 HOH HOH A . R 9 HOH 90 437 110 HOH HOH A . R 9 HOH 91 438 111 HOH HOH A . R 9 HOH 92 439 113 HOH HOH A . R 9 HOH 93 440 115 HOH HOH A . R 9 HOH 94 441 116 HOH HOH A . R 9 HOH 95 442 118 HOH HOH A . R 9 HOH 96 443 119 HOH HOH A . R 9 HOH 97 444 120 HOH HOH A . R 9 HOH 98 445 123 HOH HOH A . R 9 HOH 99 446 124 HOH HOH A . R 9 HOH 100 447 125 HOH HOH A . R 9 HOH 101 448 126 HOH HOH A . R 9 HOH 102 449 127 HOH HOH A . R 9 HOH 103 450 128 HOH HOH A . R 9 HOH 104 451 129 HOH HOH A . R 9 HOH 105 452 130 HOH HOH A . R 9 HOH 106 453 131 HOH HOH A . R 9 HOH 107 454 132 HOH HOH A . R 9 HOH 108 455 133 HOH HOH A . R 9 HOH 109 456 135 HOH HOH A . R 9 HOH 110 457 136 HOH HOH A . R 9 HOH 111 458 137 HOH HOH A . R 9 HOH 112 459 138 HOH HOH A . R 9 HOH 113 460 139 HOH HOH A . R 9 HOH 114 461 140 HOH HOH A . R 9 HOH 115 462 141 HOH HOH A . R 9 HOH 116 463 142 HOH HOH A . R 9 HOH 117 464 143 HOH HOH A . R 9 HOH 118 465 144 HOH HOH A . R 9 HOH 119 466 145 HOH HOH A . R 9 HOH 120 467 146 HOH HOH A . R 9 HOH 121 468 147 HOH HOH A . R 9 HOH 122 469 149 HOH HOH A . R 9 HOH 123 470 151 HOH HOH A . R 9 HOH 124 471 152 HOH HOH A . R 9 HOH 125 472 153 HOH HOH A . R 9 HOH 126 473 154 HOH HOH A . R 9 HOH 127 474 157 HOH HOH A . R 9 HOH 128 475 158 HOH HOH A . R 9 HOH 129 476 159 HOH HOH A . R 9 HOH 130 477 161 HOH HOH A . R 9 HOH 131 478 163 HOH HOH A . R 9 HOH 132 479 165 HOH HOH A . R 9 HOH 133 480 166 HOH HOH A . R 9 HOH 134 481 167 HOH HOH A . R 9 HOH 135 482 168 HOH HOH A . R 9 HOH 136 483 171 HOH HOH A . R 9 HOH 137 484 172 HOH HOH A . R 9 HOH 138 485 174 HOH HOH A . R 9 HOH 139 486 175 HOH HOH A . R 9 HOH 140 487 176 HOH HOH A . R 9 HOH 141 488 177 HOH HOH A . R 9 HOH 142 489 181 HOH HOH A . R 9 HOH 143 490 182 HOH HOH A . R 9 HOH 144 491 200 HOH HOH A . R 9 HOH 145 492 201 HOH HOH A . R 9 HOH 146 493 202 HOH HOH A . R 9 HOH 147 494 203 HOH HOH A . R 9 HOH 148 495 204 HOH HOH A . R 9 HOH 149 496 211 HOH HOH A . R 9 HOH 150 497 212 HOH HOH A . R 9 HOH 151 498 217 HOH HOH A . R 9 HOH 152 499 218 HOH HOH A . R 9 HOH 153 500 224 HOH HOH A . R 9 HOH 154 501 225 HOH HOH A . R 9 HOH 155 502 226 HOH HOH A . R 9 HOH 156 503 228 HOH HOH A . R 9 HOH 157 504 229 HOH HOH A . R 9 HOH 158 505 230 HOH HOH A . R 9 HOH 159 506 231 HOH HOH A . R 9 HOH 160 507 232 HOH HOH A . R 9 HOH 161 508 233 HOH HOH A . R 9 HOH 162 509 235 HOH HOH A . R 9 HOH 163 510 236 HOH HOH A . R 9 HOH 164 511 237 HOH HOH A . R 9 HOH 165 512 242 HOH HOH A . R 9 HOH 166 513 243 HOH HOH A . R 9 HOH 167 514 244 HOH HOH A . R 9 HOH 168 515 245 HOH HOH A . R 9 HOH 169 516 246 HOH HOH A . R 9 HOH 170 517 247 HOH HOH A . R 9 HOH 171 518 248 HOH HOH A . R 9 HOH 172 519 250 HOH HOH A . R 9 HOH 173 520 251 HOH HOH A . R 9 HOH 174 521 253 HOH HOH A . R 9 HOH 175 522 254 HOH HOH A . R 9 HOH 176 523 256 HOH HOH A . R 9 HOH 177 524 257 HOH HOH A . R 9 HOH 178 525 258 HOH HOH A . R 9 HOH 179 526 259 HOH HOH A . R 9 HOH 180 527 260 HOH HOH A . R 9 HOH 181 528 261 HOH HOH A . R 9 HOH 182 529 262 HOH HOH A . R 9 HOH 183 530 264 HOH HOH A . R 9 HOH 184 531 265 HOH HOH A . R 9 HOH 185 532 266 HOH HOH A . R 9 HOH 186 533 267 HOH HOH A . R 9 HOH 187 534 268 HOH HOH A . R 9 HOH 188 535 269 HOH HOH A . R 9 HOH 189 536 270 HOH HOH A . R 9 HOH 190 537 271 HOH HOH A . R 9 HOH 191 538 273 HOH HOH A . R 9 HOH 192 539 275 HOH HOH A . R 9 HOH 193 540 276 HOH HOH A . R 9 HOH 194 541 281 HOH HOH A . R 9 HOH 195 542 282 HOH HOH A . R 9 HOH 196 543 283 HOH HOH A . R 9 HOH 197 544 284 HOH HOH A . R 9 HOH 198 545 286 HOH HOH A . R 9 HOH 199 546 287 HOH HOH A . R 9 HOH 200 547 288 HOH HOH A . R 9 HOH 201 548 289 HOH HOH A . R 9 HOH 202 549 290 HOH HOH A . R 9 HOH 203 550 291 HOH HOH A . R 9 HOH 204 551 292 HOH HOH A . R 9 HOH 205 552 293 HOH HOH A . R 9 HOH 206 553 294 HOH HOH A . R 9 HOH 207 554 295 HOH HOH A . R 9 HOH 208 555 298 HOH HOH A . R 9 HOH 209 556 300 HOH HOH A . R 9 HOH 210 557 301 HOH HOH A . R 9 HOH 211 558 302 HOH HOH A . R 9 HOH 212 559 303 HOH HOH A . R 9 HOH 213 560 304 HOH HOH A . R 9 HOH 214 561 305 HOH HOH A . R 9 HOH 215 562 312 HOH HOH A . R 9 HOH 216 563 315 HOH HOH A . R 9 HOH 217 564 317 HOH HOH A . R 9 HOH 218 565 319 HOH HOH A . R 9 HOH 219 566 320 HOH HOH A . R 9 HOH 220 567 323 HOH HOH A . R 9 HOH 221 568 324 HOH HOH A . R 9 HOH 222 569 325 HOH HOH A . R 9 HOH 223 570 327 HOH HOH A . R 9 HOH 224 571 328 HOH HOH A . R 9 HOH 225 572 329 HOH HOH A . R 9 HOH 226 573 330 HOH HOH A . R 9 HOH 227 574 331 HOH HOH A . R 9 HOH 228 575 332 HOH HOH A . R 9 HOH 229 576 333 HOH HOH A . R 9 HOH 230 577 335 HOH HOH A . R 9 HOH 231 578 337 HOH HOH A . R 9 HOH 232 579 338 HOH HOH A . R 9 HOH 233 580 339 HOH HOH A . R 9 HOH 234 581 342 HOH HOH A . R 9 HOH 235 582 343 HOH HOH A . R 9 HOH 236 583 344 HOH HOH A . R 9 HOH 237 584 400 HOH HOH A . R 9 HOH 238 585 401 HOH HOH A . R 9 HOH 239 586 402 HOH HOH A . R 9 HOH 240 587 403 HOH HOH A . R 9 HOH 241 588 404 HOH HOH A . R 9 HOH 242 589 405 HOH HOH A . R 9 HOH 243 590 406 HOH HOH A . R 9 HOH 244 591 409 HOH HOH A . R 9 HOH 245 592 410 HOH HOH A . R 9 HOH 246 593 412 HOH HOH A . R 9 HOH 247 594 413 HOH HOH A . R 9 HOH 248 595 414 HOH HOH A . R 9 HOH 249 596 415 HOH HOH A . R 9 HOH 250 597 416 HOH HOH A . R 9 HOH 251 598 417 HOH HOH A . R 9 HOH 252 599 418 HOH HOH A . R 9 HOH 253 600 420 HOH HOH A . R 9 HOH 254 601 801 HOH HOH A . R 9 HOH 255 602 802 HOH HOH A . R 9 HOH 256 603 803 HOH HOH A . R 9 HOH 257 604 804 HOH HOH A . R 9 HOH 258 605 805 HOH HOH A . R 9 HOH 259 606 806 HOH HOH A . R 9 HOH 260 607 807 HOH HOH A . R 9 HOH 261 608 810 HOH HOH A . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id B _pdbx_struct_mod_residue.label_comp_id DOC _pdbx_struct_mod_residue.label_seq_id 10 _pdbx_struct_mod_residue.auth_asym_id P _pdbx_struct_mod_residue.auth_comp_id DOC _pdbx_struct_mod_residue.auth_seq_id 10 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id DC _pdbx_struct_mod_residue.details "2',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE" # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_conn_angle.id 1 _pdbx_struct_conn_angle.ptnr1_label_atom_id OD1 _pdbx_struct_conn_angle.ptnr1_label_alt_id ? _pdbx_struct_conn_angle.ptnr1_label_asym_id D _pdbx_struct_conn_angle.ptnr1_label_comp_id ASP _pdbx_struct_conn_angle.ptnr1_label_seq_id 190 _pdbx_struct_conn_angle.ptnr1_auth_atom_id ? _pdbx_struct_conn_angle.ptnr1_auth_asym_id A _pdbx_struct_conn_angle.ptnr1_auth_comp_id ASP _pdbx_struct_conn_angle.ptnr1_auth_seq_id 190 _pdbx_struct_conn_angle.ptnr1_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr1_symmetry 1_555 _pdbx_struct_conn_angle.ptnr2_label_atom_id MG _pdbx_struct_conn_angle.ptnr2_label_alt_id ? _pdbx_struct_conn_angle.ptnr2_label_asym_id E _pdbx_struct_conn_angle.ptnr2_label_comp_id MG _pdbx_struct_conn_angle.ptnr2_label_seq_id . _pdbx_struct_conn_angle.ptnr2_auth_atom_id ? _pdbx_struct_conn_angle.ptnr2_auth_asym_id A _pdbx_struct_conn_angle.ptnr2_auth_comp_id MG _pdbx_struct_conn_angle.ptnr2_auth_seq_id 339 _pdbx_struct_conn_angle.ptnr2_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr2_symmetry 1_555 _pdbx_struct_conn_angle.ptnr3_label_atom_id OD2 _pdbx_struct_conn_angle.ptnr3_label_alt_id ? _pdbx_struct_conn_angle.ptnr3_label_asym_id D _pdbx_struct_conn_angle.ptnr3_label_comp_id ASP _pdbx_struct_conn_angle.ptnr3_label_seq_id 192 _pdbx_struct_conn_angle.ptnr3_auth_atom_id ? _pdbx_struct_conn_angle.ptnr3_auth_asym_id A _pdbx_struct_conn_angle.ptnr3_auth_comp_id ASP _pdbx_struct_conn_angle.ptnr3_auth_seq_id 192 _pdbx_struct_conn_angle.ptnr3_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr3_symmetry 1_555 _pdbx_struct_conn_angle.value 95.5 _pdbx_struct_conn_angle.value_esd ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-01-08 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2023-08-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 4 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 5 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement 1.1 ? 1 HKL-2000 'data collection' . ? 2 HKL-2000 'data reduction' . ? 3 HKL-2000 'data scaling' . ? 4 CNS phasing . ? 5 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 P _pdbx_validate_rmsd_bond.auth_asym_id_1 D _pdbx_validate_rmsd_bond.auth_comp_id_1 DG _pdbx_validate_rmsd_bond.auth_seq_id_1 1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 OP3 _pdbx_validate_rmsd_bond.auth_asym_id_2 D _pdbx_validate_rmsd_bond.auth_comp_id_2 DG _pdbx_validate_rmsd_bond.auth_seq_id_2 1 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.521 _pdbx_validate_rmsd_bond.bond_target_value 1.607 _pdbx_validate_rmsd_bond.bond_deviation -0.086 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.012 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 32 ? ? -115.53 79.77 2 1 PRO A 50 ? ? -75.77 22.39 3 1 CYS A 178 ? ? -111.20 -133.72 4 1 ASP A 246 ? ? 67.63 -6.57 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 123 ? CG ? D GLU 123 CG 2 1 Y 1 A GLU 123 ? CD ? D GLU 123 CD 3 1 Y 1 A GLU 123 ? OE1 ? D GLU 123 OE1 4 1 Y 1 A GLU 123 ? OE2 ? D GLU 123 OE2 5 1 Y 1 A LYS 248 ? CG ? D LYS 248 CG 6 1 Y 1 A LYS 248 ? CD ? D LYS 248 CD 7 1 Y 1 A LYS 248 ? CE ? D LYS 248 CE 8 1 Y 1 A LYS 248 ? NZ ? D LYS 248 NZ 9 1 Y 1 A VAL 303 ? CG1 ? D VAL 303 CG1 10 1 Y 1 A VAL 303 ? CG2 ? D VAL 303 CG2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? D MET 1 2 1 Y 1 A SER 2 ? D SER 2 3 1 Y 1 A LYS 3 ? D LYS 3 4 1 Y 1 A ARG 4 ? D ARG 4 5 1 Y 1 A LYS 5 ? D LYS 5 6 1 Y 1 A ALA 6 ? D ALA 6 7 1 Y 1 A PRO 7 ? D PRO 7 8 1 Y 1 A GLN 8 ? D GLN 8 9 1 Y 1 A GLU 9 ? D GLU 9 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CL CL CL N N 74 CYS N N N N 75 CYS CA C N R 76 CYS C C N N 77 CYS O O N N 78 CYS CB C N N 79 CYS SG S N N 80 CYS OXT O N N 81 CYS H H N N 82 CYS H2 H N N 83 CYS HA H N N 84 CYS HB2 H N N 85 CYS HB3 H N N 86 CYS HG H N N 87 CYS HXT H N N 88 DA OP3 O N N 89 DA P P N N 90 DA OP1 O N N 91 DA OP2 O N N 92 DA "O5'" O N N 93 DA "C5'" C N N 94 DA "C4'" C N R 95 DA "O4'" O N N 96 DA "C3'" C N S 97 DA "O3'" O N N 98 DA "C2'" C N N 99 DA "C1'" C N R 100 DA N9 N Y N 101 DA C8 C Y N 102 DA N7 N Y N 103 DA C5 C Y N 104 DA C6 C Y N 105 DA N6 N N N 106 DA N1 N Y N 107 DA C2 C Y N 108 DA N3 N Y N 109 DA C4 C Y N 110 DA HOP3 H N N 111 DA HOP2 H N N 112 DA "H5'" H N N 113 DA "H5''" H N N 114 DA "H4'" H N N 115 DA "H3'" H N N 116 DA "HO3'" H N N 117 DA "H2'" H N N 118 DA "H2''" H N N 119 DA "H1'" H N N 120 DA H8 H N N 121 DA H61 H N N 122 DA H62 H N N 123 DA H2 H N N 124 DC OP3 O N N 125 DC P P N N 126 DC OP1 O N N 127 DC OP2 O N N 128 DC "O5'" O N N 129 DC "C5'" C N N 130 DC "C4'" C N R 131 DC "O4'" O N N 132 DC "C3'" C N S 133 DC "O3'" O N N 134 DC "C2'" C N N 135 DC "C1'" C N R 136 DC N1 N N N 137 DC C2 C N N 138 DC O2 O N N 139 DC N3 N N N 140 DC C4 C N N 141 DC N4 N N N 142 DC C5 C N N 143 DC C6 C N N 144 DC HOP3 H N N 145 DC HOP2 H N N 146 DC "H5'" H N N 147 DC "H5''" H N N 148 DC "H4'" H N N 149 DC "H3'" H N N 150 DC "HO3'" H N N 151 DC "H2'" H N N 152 DC "H2''" H N N 153 DC "H1'" H N N 154 DC H41 H N N 155 DC H42 H N N 156 DC H5 H N N 157 DC H6 H N N 158 DG OP3 O N N 159 DG P P N N 160 DG OP1 O N N 161 DG OP2 O N N 162 DG "O5'" O N N 163 DG "C5'" C N N 164 DG "C4'" C N R 165 DG "O4'" O N N 166 DG "C3'" C N S 167 DG "O3'" O N N 168 DG "C2'" C N N 169 DG "C1'" C N R 170 DG N9 N Y N 171 DG C8 C Y N 172 DG N7 N Y N 173 DG C5 C Y N 174 DG C6 C N N 175 DG O6 O N N 176 DG N1 N N N 177 DG C2 C N N 178 DG N2 N N N 179 DG N3 N N N 180 DG C4 C Y N 181 DG HOP3 H N N 182 DG HOP2 H N N 183 DG "H5'" H N N 184 DG "H5''" H N N 185 DG "H4'" H N N 186 DG "H3'" H N N 187 DG "HO3'" H N N 188 DG "H2'" H N N 189 DG "H2''" H N N 190 DG "H1'" H N N 191 DG H8 H N N 192 DG H1 H N N 193 DG H21 H N N 194 DG H22 H N N 195 DOC N1 N N N 196 DOC C2 C N N 197 DOC N3 N N N 198 DOC C4 C N N 199 DOC C5 C N N 200 DOC C6 C N N 201 DOC O2 O N N 202 DOC N4 N N N 203 DOC "C1'" C N R 204 DOC "C2'" C N N 205 DOC "C3'" C N N 206 DOC "C4'" C N S 207 DOC "O4'" O N N 208 DOC "C5'" C N N 209 DOC "O5'" O N N 210 DOC P P N N 211 DOC OP1 O N N 212 DOC OP2 O N N 213 DOC OP3 O N N 214 DOC H5 H N N 215 DOC H6 H N N 216 DOC HN41 H N N 217 DOC HN42 H N N 218 DOC "H1'" H N N 219 DOC "H2'" H N N 220 DOC "H2''" H N N 221 DOC "H3'1" H N N 222 DOC "H3'2" H N N 223 DOC "H4'" H N N 224 DOC "H5'" H N N 225 DOC "H5''" H N N 226 DOC HOP2 H N N 227 DOC HOP3 H N N 228 DT OP3 O N N 229 DT P P N N 230 DT OP1 O N N 231 DT OP2 O N N 232 DT "O5'" O N N 233 DT "C5'" C N N 234 DT "C4'" C N R 235 DT "O4'" O N N 236 DT "C3'" C N S 237 DT "O3'" O N N 238 DT "C2'" C N N 239 DT "C1'" C N R 240 DT N1 N N N 241 DT C2 C N N 242 DT O2 O N N 243 DT N3 N N N 244 DT C4 C N N 245 DT O4 O N N 246 DT C5 C N N 247 DT C7 C N N 248 DT C6 C N N 249 DT HOP3 H N N 250 DT HOP2 H N N 251 DT "H5'" H N N 252 DT "H5''" H N N 253 DT "H4'" H N N 254 DT "H3'" H N N 255 DT "HO3'" H N N 256 DT "H2'" H N N 257 DT "H2''" H N N 258 DT "H1'" H N N 259 DT H3 H N N 260 DT H71 H N N 261 DT H72 H N N 262 DT H73 H N N 263 DT H6 H N N 264 GFH PA P N R 265 GFH O1A O N N 266 GFH O2A O N N 267 GFH O3A O N N 268 GFH "O5'" O N N 269 GFH PB P N R 270 GFH O1B O N N 271 GFH O2B O N N 272 GFH C3B C N R 273 GFH F3B F N N 274 GFH PG P N N 275 GFH O1G O N N 276 GFH O2G O N N 277 GFH O3G O N N 278 GFH "C5'" C N N 279 GFH "C4'" C N R 280 GFH "O4'" O N N 281 GFH "C1'" C N R 282 GFH N9 N Y N 283 GFH C4 C Y N 284 GFH N3 N N N 285 GFH C2 C N N 286 GFH N2 N N N 287 GFH N1 N N N 288 GFH C6 C N N 289 GFH O6 O N N 290 GFH C5 C Y N 291 GFH N7 N Y N 292 GFH C8 C Y N 293 GFH "C2'" C N N 294 GFH "C3'" C N S 295 GFH "O3'" O N N 296 GFH HO1A H N N 297 GFH HO2B H N N 298 GFH H3B H N N 299 GFH HO1G H N N 300 GFH HO2G H N N 301 GFH "H5'1" H N N 302 GFH "H5'2" H N N 303 GFH "H4'" H N N 304 GFH "H1'" H N N 305 GFH HN21 H N N 306 GFH HN22 H N N 307 GFH HN1 H N N 308 GFH H8 H N N 309 GFH "H2'1" H N N 310 GFH "H2'2" H N N 311 GFH "H3'" H N N 312 GFH "HO3'" H N N 313 GLN N N N N 314 GLN CA C N S 315 GLN C C N N 316 GLN O O N N 317 GLN CB C N N 318 GLN CG C N N 319 GLN CD C N N 320 GLN OE1 O N N 321 GLN NE2 N N N 322 GLN OXT O N N 323 GLN H H N N 324 GLN H2 H N N 325 GLN HA H N N 326 GLN HB2 H N N 327 GLN HB3 H N N 328 GLN HG2 H N N 329 GLN HG3 H N N 330 GLN HE21 H N N 331 GLN HE22 H N N 332 GLN HXT H N N 333 GLU N N N N 334 GLU CA C N S 335 GLU C C N N 336 GLU O O N N 337 GLU CB C N N 338 GLU CG C N N 339 GLU CD C N N 340 GLU OE1 O N N 341 GLU OE2 O N N 342 GLU OXT O N N 343 GLU H H N N 344 GLU H2 H N N 345 GLU HA H N N 346 GLU HB2 H N N 347 GLU HB3 H N N 348 GLU HG2 H N N 349 GLU HG3 H N N 350 GLU HE2 H N N 351 GLU HXT H N N 352 GLY N N N N 353 GLY CA C N N 354 GLY C C N N 355 GLY O O N N 356 GLY OXT O N N 357 GLY H H N N 358 GLY H2 H N N 359 GLY HA2 H N N 360 GLY HA3 H N N 361 GLY HXT H N N 362 HIS N N N N 363 HIS CA C N S 364 HIS C C N N 365 HIS O O N N 366 HIS CB C N N 367 HIS CG C Y N 368 HIS ND1 N Y N 369 HIS CD2 C Y N 370 HIS CE1 C Y N 371 HIS NE2 N Y N 372 HIS OXT O N N 373 HIS H H N N 374 HIS H2 H N N 375 HIS HA H N N 376 HIS HB2 H N N 377 HIS HB3 H N N 378 HIS HD1 H N N 379 HIS HD2 H N N 380 HIS HE1 H N N 381 HIS HE2 H N N 382 HIS HXT H N N 383 HOH O O N N 384 HOH H1 H N N 385 HOH H2 H N N 386 ILE N N N N 387 ILE CA C N S 388 ILE C C N N 389 ILE O O N N 390 ILE CB C N S 391 ILE CG1 C N N 392 ILE CG2 C N N 393 ILE CD1 C N N 394 ILE OXT O N N 395 ILE H H N N 396 ILE H2 H N N 397 ILE HA H N N 398 ILE HB H N N 399 ILE HG12 H N N 400 ILE HG13 H N N 401 ILE HG21 H N N 402 ILE HG22 H N N 403 ILE HG23 H N N 404 ILE HD11 H N N 405 ILE HD12 H N N 406 ILE HD13 H N N 407 ILE HXT H N N 408 LEU N N N N 409 LEU CA C N S 410 LEU C C N N 411 LEU O O N N 412 LEU CB C N N 413 LEU CG C N N 414 LEU CD1 C N N 415 LEU CD2 C N N 416 LEU OXT O N N 417 LEU H H N N 418 LEU H2 H N N 419 LEU HA H N N 420 LEU HB2 H N N 421 LEU HB3 H N N 422 LEU HG H N N 423 LEU HD11 H N N 424 LEU HD12 H N N 425 LEU HD13 H N N 426 LEU HD21 H N N 427 LEU HD22 H N N 428 LEU HD23 H N N 429 LEU HXT H N N 430 LYS N N N N 431 LYS CA C N S 432 LYS C C N N 433 LYS O O N N 434 LYS CB C N N 435 LYS CG C N N 436 LYS CD C N N 437 LYS CE C N N 438 LYS NZ N N N 439 LYS OXT O N N 440 LYS H H N N 441 LYS H2 H N N 442 LYS HA H N N 443 LYS HB2 H N N 444 LYS HB3 H N N 445 LYS HG2 H N N 446 LYS HG3 H N N 447 LYS HD2 H N N 448 LYS HD3 H N N 449 LYS HE2 H N N 450 LYS HE3 H N N 451 LYS HZ1 H N N 452 LYS HZ2 H N N 453 LYS HZ3 H N N 454 LYS HXT H N N 455 MET N N N N 456 MET CA C N S 457 MET C C N N 458 MET O O N N 459 MET CB C N N 460 MET CG C N N 461 MET SD S N N 462 MET CE C N N 463 MET OXT O N N 464 MET H H N N 465 MET H2 H N N 466 MET HA H N N 467 MET HB2 H N N 468 MET HB3 H N N 469 MET HG2 H N N 470 MET HG3 H N N 471 MET HE1 H N N 472 MET HE2 H N N 473 MET HE3 H N N 474 MET HXT H N N 475 MG MG MG N N 476 NA NA NA N N 477 PHE N N N N 478 PHE CA C N S 479 PHE C C N N 480 PHE O O N N 481 PHE CB C N N 482 PHE CG C Y N 483 PHE CD1 C Y N 484 PHE CD2 C Y N 485 PHE CE1 C Y N 486 PHE CE2 C Y N 487 PHE CZ C Y N 488 PHE OXT O N N 489 PHE H H N N 490 PHE H2 H N N 491 PHE HA H N N 492 PHE HB2 H N N 493 PHE HB3 H N N 494 PHE HD1 H N N 495 PHE HD2 H N N 496 PHE HE1 H N N 497 PHE HE2 H N N 498 PHE HZ H N N 499 PHE HXT H N N 500 PRO N N N N 501 PRO CA C N S 502 PRO C C N N 503 PRO O O N N 504 PRO CB C N N 505 PRO CG C N N 506 PRO CD C N N 507 PRO OXT O N N 508 PRO H H N N 509 PRO HA H N N 510 PRO HB2 H N N 511 PRO HB3 H N N 512 PRO HG2 H N N 513 PRO HG3 H N N 514 PRO HD2 H N N 515 PRO HD3 H N N 516 PRO HXT H N N 517 SER N N N N 518 SER CA C N S 519 SER C C N N 520 SER O O N N 521 SER CB C N N 522 SER OG O N N 523 SER OXT O N N 524 SER H H N N 525 SER H2 H N N 526 SER HA H N N 527 SER HB2 H N N 528 SER HB3 H N N 529 SER HG H N N 530 SER HXT H N N 531 THR N N N N 532 THR CA C N S 533 THR C C N N 534 THR O O N N 535 THR CB C N R 536 THR OG1 O N N 537 THR CG2 C N N 538 THR OXT O N N 539 THR H H N N 540 THR H2 H N N 541 THR HA H N N 542 THR HB H N N 543 THR HG1 H N N 544 THR HG21 H N N 545 THR HG22 H N N 546 THR HG23 H N N 547 THR HXT H N N 548 TRP N N N N 549 TRP CA C N S 550 TRP C C N N 551 TRP O O N N 552 TRP CB C N N 553 TRP CG C Y N 554 TRP CD1 C Y N 555 TRP CD2 C Y N 556 TRP NE1 N Y N 557 TRP CE2 C Y N 558 TRP CE3 C Y N 559 TRP CZ2 C Y N 560 TRP CZ3 C Y N 561 TRP CH2 C Y N 562 TRP OXT O N N 563 TRP H H N N 564 TRP H2 H N N 565 TRP HA H N N 566 TRP HB2 H N N 567 TRP HB3 H N N 568 TRP HD1 H N N 569 TRP HE1 H N N 570 TRP HE3 H N N 571 TRP HZ2 H N N 572 TRP HZ3 H N N 573 TRP HH2 H N N 574 TRP HXT H N N 575 TYR N N N N 576 TYR CA C N S 577 TYR C C N N 578 TYR O O N N 579 TYR CB C N N 580 TYR CG C Y N 581 TYR CD1 C Y N 582 TYR CD2 C Y N 583 TYR CE1 C Y N 584 TYR CE2 C Y N 585 TYR CZ C Y N 586 TYR OH O N N 587 TYR OXT O N N 588 TYR H H N N 589 TYR H2 H N N 590 TYR HA H N N 591 TYR HB2 H N N 592 TYR HB3 H N N 593 TYR HD1 H N N 594 TYR HD2 H N N 595 TYR HE1 H N N 596 TYR HE2 H N N 597 TYR HH H N N 598 TYR HXT H N N 599 VAL N N N N 600 VAL CA C N S 601 VAL C C N N 602 VAL O O N N 603 VAL CB C N N 604 VAL CG1 C N N 605 VAL CG2 C N N 606 VAL OXT O N N 607 VAL H H N N 608 VAL H2 H N N 609 VAL HA H N N 610 VAL HB H N N 611 VAL HG11 H N N 612 VAL HG12 H N N 613 VAL HG13 H N N 614 VAL HG21 H N N 615 VAL HG22 H N N 616 VAL HG23 H N N 617 VAL HXT H N N 618 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DOC N1 C2 sing N N 195 DOC N1 C6 sing N N 196 DOC N1 "C1'" sing N N 197 DOC C2 N3 sing N N 198 DOC C2 O2 doub N N 199 DOC N3 C4 doub N N 200 DOC C4 C5 sing N N 201 DOC C4 N4 sing N N 202 DOC C5 C6 doub N N 203 DOC C5 H5 sing N N 204 DOC C6 H6 sing N N 205 DOC N4 HN41 sing N N 206 DOC N4 HN42 sing N N 207 DOC "C1'" "C2'" sing N N 208 DOC "C1'" "O4'" sing N N 209 DOC "C1'" "H1'" sing N N 210 DOC "C2'" "C3'" sing N N 211 DOC "C2'" "H2'" sing N N 212 DOC "C2'" "H2''" sing N N 213 DOC "C3'" "C4'" sing N N 214 DOC "C3'" "H3'1" sing N N 215 DOC "C3'" "H3'2" sing N N 216 DOC "C4'" "O4'" sing N N 217 DOC "C4'" "C5'" sing N N 218 DOC "C4'" "H4'" sing N N 219 DOC "C5'" "O5'" sing N N 220 DOC "C5'" "H5'" sing N N 221 DOC "C5'" "H5''" sing N N 222 DOC "O5'" P sing N N 223 DOC P OP1 doub N N 224 DOC P OP2 sing N N 225 DOC P OP3 sing N N 226 DOC OP2 HOP2 sing N N 227 DOC OP3 HOP3 sing N N 228 DT OP3 P sing N N 229 DT OP3 HOP3 sing N N 230 DT P OP1 doub N N 231 DT P OP2 sing N N 232 DT P "O5'" sing N N 233 DT OP2 HOP2 sing N N 234 DT "O5'" "C5'" sing N N 235 DT "C5'" "C4'" sing N N 236 DT "C5'" "H5'" sing N N 237 DT "C5'" "H5''" sing N N 238 DT "C4'" "O4'" sing N N 239 DT "C4'" "C3'" sing N N 240 DT "C4'" "H4'" sing N N 241 DT "O4'" "C1'" sing N N 242 DT "C3'" "O3'" sing N N 243 DT "C3'" "C2'" sing N N 244 DT "C3'" "H3'" sing N N 245 DT "O3'" "HO3'" sing N N 246 DT "C2'" "C1'" sing N N 247 DT "C2'" "H2'" sing N N 248 DT "C2'" "H2''" sing N N 249 DT "C1'" N1 sing N N 250 DT "C1'" "H1'" sing N N 251 DT N1 C2 sing N N 252 DT N1 C6 sing N N 253 DT C2 O2 doub N N 254 DT C2 N3 sing N N 255 DT N3 C4 sing N N 256 DT N3 H3 sing N N 257 DT C4 O4 doub N N 258 DT C4 C5 sing N N 259 DT C5 C7 sing N N 260 DT C5 C6 doub N N 261 DT C7 H71 sing N N 262 DT C7 H72 sing N N 263 DT C7 H73 sing N N 264 DT C6 H6 sing N N 265 GFH PA "O5'" sing N N 266 GFH PA O3A sing N N 267 GFH PA O2A doub N N 268 GFH PA O1A sing N N 269 GFH O1A HO1A sing N N 270 GFH O3A PB sing N N 271 GFH "O5'" "C5'" sing N N 272 GFH PB O1B doub N N 273 GFH PB O2B sing N N 274 GFH PB C3B sing N N 275 GFH O2B HO2B sing N N 276 GFH C3B F3B sing N N 277 GFH C3B PG sing N N 278 GFH C3B H3B sing N N 279 GFH PG O3G doub N N 280 GFH PG O1G sing N N 281 GFH PG O2G sing N N 282 GFH O1G HO1G sing N N 283 GFH O2G HO2G sing N N 284 GFH "C5'" "C4'" sing N N 285 GFH "C5'" "H5'1" sing N N 286 GFH "C5'" "H5'2" sing N N 287 GFH "C4'" "C3'" sing N N 288 GFH "C4'" "O4'" sing N N 289 GFH "C4'" "H4'" sing N N 290 GFH "O4'" "C1'" sing N N 291 GFH "C1'" "C2'" sing N N 292 GFH "C1'" N9 sing N N 293 GFH "C1'" "H1'" sing N N 294 GFH N9 C4 sing Y N 295 GFH N9 C8 sing Y N 296 GFH C4 N3 sing N N 297 GFH C4 C5 doub Y N 298 GFH N3 C2 doub N N 299 GFH C2 N2 sing N N 300 GFH C2 N1 sing N N 301 GFH N2 HN21 sing N N 302 GFH N2 HN22 sing N N 303 GFH N1 C6 sing N N 304 GFH N1 HN1 sing N N 305 GFH C6 O6 doub N N 306 GFH C6 C5 sing N N 307 GFH C5 N7 sing Y N 308 GFH N7 C8 doub Y N 309 GFH C8 H8 sing N N 310 GFH "C2'" "C3'" sing N N 311 GFH "C2'" "H2'1" sing N N 312 GFH "C2'" "H2'2" sing N N 313 GFH "C3'" "O3'" sing N N 314 GFH "C3'" "H3'" sing N N 315 GFH "O3'" "HO3'" sing N N 316 GLN N CA sing N N 317 GLN N H sing N N 318 GLN N H2 sing N N 319 GLN CA C sing N N 320 GLN CA CB sing N N 321 GLN CA HA sing N N 322 GLN C O doub N N 323 GLN C OXT sing N N 324 GLN CB CG sing N N 325 GLN CB HB2 sing N N 326 GLN CB HB3 sing N N 327 GLN CG CD sing N N 328 GLN CG HG2 sing N N 329 GLN CG HG3 sing N N 330 GLN CD OE1 doub N N 331 GLN CD NE2 sing N N 332 GLN NE2 HE21 sing N N 333 GLN NE2 HE22 sing N N 334 GLN OXT HXT sing N N 335 GLU N CA sing N N 336 GLU N H sing N N 337 GLU N H2 sing N N 338 GLU CA C sing N N 339 GLU CA CB sing N N 340 GLU CA HA sing N N 341 GLU C O doub N N 342 GLU C OXT sing N N 343 GLU CB CG sing N N 344 GLU CB HB2 sing N N 345 GLU CB HB3 sing N N 346 GLU CG CD sing N N 347 GLU CG HG2 sing N N 348 GLU CG HG3 sing N N 349 GLU CD OE1 doub N N 350 GLU CD OE2 sing N N 351 GLU OE2 HE2 sing N N 352 GLU OXT HXT sing N N 353 GLY N CA sing N N 354 GLY N H sing N N 355 GLY N H2 sing N N 356 GLY CA C sing N N 357 GLY CA HA2 sing N N 358 GLY CA HA3 sing N N 359 GLY C O doub N N 360 GLY C OXT sing N N 361 GLY OXT HXT sing N N 362 HIS N CA sing N N 363 HIS N H sing N N 364 HIS N H2 sing N N 365 HIS CA C sing N N 366 HIS CA CB sing N N 367 HIS CA HA sing N N 368 HIS C O doub N N 369 HIS C OXT sing N N 370 HIS CB CG sing N N 371 HIS CB HB2 sing N N 372 HIS CB HB3 sing N N 373 HIS CG ND1 sing Y N 374 HIS CG CD2 doub Y N 375 HIS ND1 CE1 doub Y N 376 HIS ND1 HD1 sing N N 377 HIS CD2 NE2 sing Y N 378 HIS CD2 HD2 sing N N 379 HIS CE1 NE2 sing Y N 380 HIS CE1 HE1 sing N N 381 HIS NE2 HE2 sing N N 382 HIS OXT HXT sing N N 383 HOH O H1 sing N N 384 HOH O H2 sing N N 385 ILE N CA sing N N 386 ILE N H sing N N 387 ILE N H2 sing N N 388 ILE CA C sing N N 389 ILE CA CB sing N N 390 ILE CA HA sing N N 391 ILE C O doub N N 392 ILE C OXT sing N N 393 ILE CB CG1 sing N N 394 ILE CB CG2 sing N N 395 ILE CB HB sing N N 396 ILE CG1 CD1 sing N N 397 ILE CG1 HG12 sing N N 398 ILE CG1 HG13 sing N N 399 ILE CG2 HG21 sing N N 400 ILE CG2 HG22 sing N N 401 ILE CG2 HG23 sing N N 402 ILE CD1 HD11 sing N N 403 ILE CD1 HD12 sing N N 404 ILE CD1 HD13 sing N N 405 ILE OXT HXT sing N N 406 LEU N CA sing N N 407 LEU N H sing N N 408 LEU N H2 sing N N 409 LEU CA C sing N N 410 LEU CA CB sing N N 411 LEU CA HA sing N N 412 LEU C O doub N N 413 LEU C OXT sing N N 414 LEU CB CG sing N N 415 LEU CB HB2 sing N N 416 LEU CB HB3 sing N N 417 LEU CG CD1 sing N N 418 LEU CG CD2 sing N N 419 LEU CG HG sing N N 420 LEU CD1 HD11 sing N N 421 LEU CD1 HD12 sing N N 422 LEU CD1 HD13 sing N N 423 LEU CD2 HD21 sing N N 424 LEU CD2 HD22 sing N N 425 LEU CD2 HD23 sing N N 426 LEU OXT HXT sing N N 427 LYS N CA sing N N 428 LYS N H sing N N 429 LYS N H2 sing N N 430 LYS CA C sing N N 431 LYS CA CB sing N N 432 LYS CA HA sing N N 433 LYS C O doub N N 434 LYS C OXT sing N N 435 LYS CB CG sing N N 436 LYS CB HB2 sing N N 437 LYS CB HB3 sing N N 438 LYS CG CD sing N N 439 LYS CG HG2 sing N N 440 LYS CG HG3 sing N N 441 LYS CD CE sing N N 442 LYS CD HD2 sing N N 443 LYS CD HD3 sing N N 444 LYS CE NZ sing N N 445 LYS CE HE2 sing N N 446 LYS CE HE3 sing N N 447 LYS NZ HZ1 sing N N 448 LYS NZ HZ2 sing N N 449 LYS NZ HZ3 sing N N 450 LYS OXT HXT sing N N 451 MET N CA sing N N 452 MET N H sing N N 453 MET N H2 sing N N 454 MET CA C sing N N 455 MET CA CB sing N N 456 MET CA HA sing N N 457 MET C O doub N N 458 MET C OXT sing N N 459 MET CB CG sing N N 460 MET CB HB2 sing N N 461 MET CB HB3 sing N N 462 MET CG SD sing N N 463 MET CG HG2 sing N N 464 MET CG HG3 sing N N 465 MET SD CE sing N N 466 MET CE HE1 sing N N 467 MET CE HE2 sing N N 468 MET CE HE3 sing N N 469 MET OXT HXT sing N N 470 PHE N CA sing N N 471 PHE N H sing N N 472 PHE N H2 sing N N 473 PHE CA C sing N N 474 PHE CA CB sing N N 475 PHE CA HA sing N N 476 PHE C O doub N N 477 PHE C OXT sing N N 478 PHE CB CG sing N N 479 PHE CB HB2 sing N N 480 PHE CB HB3 sing N N 481 PHE CG CD1 doub Y N 482 PHE CG CD2 sing Y N 483 PHE CD1 CE1 sing Y N 484 PHE CD1 HD1 sing N N 485 PHE CD2 CE2 doub Y N 486 PHE CD2 HD2 sing N N 487 PHE CE1 CZ doub Y N 488 PHE CE1 HE1 sing N N 489 PHE CE2 CZ sing Y N 490 PHE CE2 HE2 sing N N 491 PHE CZ HZ sing N N 492 PHE OXT HXT sing N N 493 PRO N CA sing N N 494 PRO N CD sing N N 495 PRO N H sing N N 496 PRO CA C sing N N 497 PRO CA CB sing N N 498 PRO CA HA sing N N 499 PRO C O doub N N 500 PRO C OXT sing N N 501 PRO CB CG sing N N 502 PRO CB HB2 sing N N 503 PRO CB HB3 sing N N 504 PRO CG CD sing N N 505 PRO CG HG2 sing N N 506 PRO CG HG3 sing N N 507 PRO CD HD2 sing N N 508 PRO CD HD3 sing N N 509 PRO OXT HXT sing N N 510 SER N CA sing N N 511 SER N H sing N N 512 SER N H2 sing N N 513 SER CA C sing N N 514 SER CA CB sing N N 515 SER CA HA sing N N 516 SER C O doub N N 517 SER C OXT sing N N 518 SER CB OG sing N N 519 SER CB HB2 sing N N 520 SER CB HB3 sing N N 521 SER OG HG sing N N 522 SER OXT HXT sing N N 523 THR N CA sing N N 524 THR N H sing N N 525 THR N H2 sing N N 526 THR CA C sing N N 527 THR CA CB sing N N 528 THR CA HA sing N N 529 THR C O doub N N 530 THR C OXT sing N N 531 THR CB OG1 sing N N 532 THR CB CG2 sing N N 533 THR CB HB sing N N 534 THR OG1 HG1 sing N N 535 THR CG2 HG21 sing N N 536 THR CG2 HG22 sing N N 537 THR CG2 HG23 sing N N 538 THR OXT HXT sing N N 539 TRP N CA sing N N 540 TRP N H sing N N 541 TRP N H2 sing N N 542 TRP CA C sing N N 543 TRP CA CB sing N N 544 TRP CA HA sing N N 545 TRP C O doub N N 546 TRP C OXT sing N N 547 TRP CB CG sing N N 548 TRP CB HB2 sing N N 549 TRP CB HB3 sing N N 550 TRP CG CD1 doub Y N 551 TRP CG CD2 sing Y N 552 TRP CD1 NE1 sing Y N 553 TRP CD1 HD1 sing N N 554 TRP CD2 CE2 doub Y N 555 TRP CD2 CE3 sing Y N 556 TRP NE1 CE2 sing Y N 557 TRP NE1 HE1 sing N N 558 TRP CE2 CZ2 sing Y N 559 TRP CE3 CZ3 doub Y N 560 TRP CE3 HE3 sing N N 561 TRP CZ2 CH2 doub Y N 562 TRP CZ2 HZ2 sing N N 563 TRP CZ3 CH2 sing Y N 564 TRP CZ3 HZ3 sing N N 565 TRP CH2 HH2 sing N N 566 TRP OXT HXT sing N N 567 TYR N CA sing N N 568 TYR N H sing N N 569 TYR N H2 sing N N 570 TYR CA C sing N N 571 TYR CA CB sing N N 572 TYR CA HA sing N N 573 TYR C O doub N N 574 TYR C OXT sing N N 575 TYR CB CG sing N N 576 TYR CB HB2 sing N N 577 TYR CB HB3 sing N N 578 TYR CG CD1 doub Y N 579 TYR CG CD2 sing Y N 580 TYR CD1 CE1 sing Y N 581 TYR CD1 HD1 sing N N 582 TYR CD2 CE2 doub Y N 583 TYR CD2 HD2 sing N N 584 TYR CE1 CZ doub Y N 585 TYR CE1 HE1 sing N N 586 TYR CE2 CZ sing Y N 587 TYR CE2 HE2 sing N N 588 TYR CZ OH sing N N 589 TYR OH HH sing N N 590 TYR OXT HXT sing N N 591 VAL N CA sing N N 592 VAL N H sing N N 593 VAL N H2 sing N N 594 VAL CA C sing N N 595 VAL CA CB sing N N 596 VAL CA HA sing N N 597 VAL C O doub N N 598 VAL C OXT sing N N 599 VAL CB CG1 sing N N 600 VAL CB CG2 sing N N 601 VAL CB HB sing N N 602 VAL CG1 HG11 sing N N 603 VAL CG1 HG12 sing N N 604 VAL CG1 HG13 sing N N 605 VAL CG2 HG21 sing N N 606 VAL CG2 HG22 sing N N 607 VAL CG2 HG23 sing N N 608 VAL OXT HXT sing N N 609 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 2PXI 'double helix' 2PXI 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 1 1_555 C DG 5 1_555 -0.101 -0.045 0.187 -17.103 -9.007 -1.857 1 T_DC1:DG5_D T 1 ? D 5 ? 19 1 1 A DC 2 1_555 C DG 4 1_555 0.961 -0.459 0.107 -0.658 -10.998 0.257 2 T_DC2:DG4_D T 2 ? D 4 ? 19 1 1 A DG 3 1_555 C DC 3 1_555 -0.916 0.069 0.437 4.995 -19.156 10.068 3 T_DG3:DC3_D T 3 ? D 3 ? ? 1 1 A DA 4 1_555 C DT 2 1_555 -0.002 0.015 0.619 8.920 -8.504 -1.009 4 T_DA4:DT2_D T 4 ? D 2 ? 20 1 1 A DC 5 1_555 C DG 1 1_555 0.174 0.048 -0.134 12.665 4.701 -0.043 5 T_DC5:DG1_D T 5 ? D 1 ? 19 1 1 A DG 7 1_555 B DOC 10 1_555 0.051 -0.023 -0.060 1.049 -3.262 -1.379 6 T_DG7:DOC10_P T 7 ? P 10 ? 19 1 1 A DC 8 1_555 B DG 9 1_555 0.284 -0.316 -0.615 12.477 -4.877 -0.318 7 T_DC8:DG9_P T 8 ? P 9 ? 19 1 1 A DG 9 1_555 B DC 8 1_555 -0.354 -0.191 -0.111 1.124 -2.025 -1.774 8 T_DG9:DC8_P T 9 ? P 8 ? 19 1 1 A DC 10 1_555 B DG 7 1_555 0.264 -0.231 0.174 4.029 -6.677 -3.700 9 T_DC10:DG7_P T 10 ? P 7 ? 19 1 1 A DA 11 1_555 B DT 6 1_555 0.299 -0.071 0.112 0.652 -8.900 4.216 10 T_DA11:DT6_P T 11 ? P 6 ? 20 1 1 A DT 12 1_555 B DA 5 1_555 0.379 -0.104 0.125 3.358 -8.996 0.661 11 T_DT12:DA5_P T 12 ? P 5 ? 20 1 1 A DC 13 1_555 B DG 4 1_555 0.560 -0.225 -0.001 -2.208 -12.022 3.543 12 T_DC13:DG4_P T 13 ? P 4 ? 19 1 1 A DA 14 1_555 B DT 3 1_555 -0.257 -0.192 0.094 -0.844 -11.856 -3.577 13 T_DA14:DT3_P T 14 ? P 3 ? 20 1 1 A DG 15 1_555 B DC 2 1_555 0.078 -0.098 0.284 8.587 -9.002 2.294 14 T_DG15:DC2_P T 15 ? P 2 ? 19 1 1 A DC 16 1_555 B DG 1 1_555 0.901 -0.368 0.368 8.859 -12.714 -0.716 15 T_DC16:DG1_P T 16 ? P 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 1 1_555 C DG 5 1_555 A DC 2 1_555 C DG 4 1_555 0.036 0.918 3.062 2.884 6.791 37.985 0.585 0.287 3.168 10.314 -4.380 38.669 1 TT_DC1DC2:DG4DG5_DD T 1 ? D 5 ? T 2 ? D 4 ? 1 A DC 2 1_555 C DG 4 1_555 A DG 3 1_555 C DC 3 1_555 0.380 1.090 3.239 -3.793 3.888 27.327 1.329 -1.703 3.277 8.128 7.930 27.851 2 TT_DC2DG3:DC3DG4_DD T 2 ? D 4 ? T 3 ? D 3 ? 1 A DG 3 1_555 C DC 3 1_555 A DA 4 1_555 C DT 2 1_555 -0.406 0.231 3.120 -3.591 -3.599 40.185 0.719 0.203 3.112 -5.212 5.202 40.493 3 TT_DG3DA4:DT2DC3_DD T 3 ? D 3 ? T 4 ? D 2 ? 1 A DA 4 1_555 C DT 2 1_555 A DC 5 1_555 C DG 1 1_555 0.869 -0.666 3.303 5.552 5.019 28.430 -2.411 -0.498 3.248 10.002 -11.065 29.379 4 TT_DA4DC5:DG1DT2_DD T 4 ? D 2 ? T 5 ? D 1 ? 1 A DG 7 1_555 B DOC 10 1_555 A DC 8 1_555 B DG 9 1_555 0.350 -0.607 3.092 3.212 5.244 30.244 -2.095 -0.073 2.967 9.921 -6.077 30.848 5 TT_DG7DC8:DG9DOC10_PP T 7 ? P 10 ? T 8 ? P 9 ? 1 A DC 8 1_555 B DG 9 1_555 A DG 9 1_555 B DC 8 1_555 -1.361 -0.035 3.649 -6.230 8.544 35.260 -1.397 1.180 3.720 13.728 10.010 36.763 6 TT_DC8DG9:DC8DG9_PP T 8 ? P 9 ? T 9 ? P 8 ? 1 A DG 9 1_555 B DC 8 1_555 A DC 10 1_555 B DG 7 1_555 -0.641 -0.553 3.324 -3.397 2.905 31.895 -1.526 0.538 3.311 5.254 6.143 32.199 7 TT_DG9DC10:DG7DC8_PP T 9 ? P 8 ? T 10 ? P 7 ? 1 A DC 10 1_555 B DG 7 1_555 A DA 11 1_555 B DT 6 1_555 0.096 -0.239 3.258 -0.452 5.621 38.423 -1.039 -0.199 3.191 8.485 0.682 38.819 8 TT_DC10DA11:DT6DG7_PP T 10 ? P 7 ? T 11 ? P 6 ? 1 A DA 11 1_555 B DT 6 1_555 A DT 12 1_555 B DA 5 1_555 0.038 -0.753 3.271 -0.681 -0.640 31.134 -1.280 -0.201 3.284 -1.193 1.269 31.148 9 TT_DA11DT12:DA5DT6_PP T 11 ? P 6 ? T 12 ? P 5 ? 1 A DT 12 1_555 B DA 5 1_555 A DC 13 1_555 B DG 4 1_555 0.407 0.010 3.347 4.735 3.236 37.179 -0.419 0.005 3.361 5.039 -7.373 37.603 10 TT_DT12DC13:DG4DA5_PP T 12 ? P 5 ? T 13 ? P 4 ? 1 A DC 13 1_555 B DG 4 1_555 A DA 14 1_555 B DT 3 1_555 -0.508 0.173 3.232 -0.370 7.861 30.411 -1.152 0.869 3.181 14.680 0.691 31.389 11 TT_DC13DA14:DT3DG4_PP T 13 ? P 4 ? T 14 ? P 3 ? 1 A DA 14 1_555 B DT 3 1_555 A DG 15 1_555 B DC 2 1_555 0.328 -0.286 3.050 -3.513 6.506 31.913 -1.540 -1.139 2.885 11.638 6.284 32.736 12 TT_DA14DG15:DC2DT3_PP T 14 ? P 3 ? T 15 ? P 2 ? 1 A DG 15 1_555 B DC 2 1_555 A DC 16 1_555 B DG 1 1_555 0.285 -0.633 3.177 -1.563 4.923 40.878 -1.409 -0.567 3.071 7.015 2.226 41.190 13 TT_DG15DC16:DG1DC2_PP T 15 ? P 2 ? T 16 ? P 1 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 5 'MAGNESIUM ION' MG 6 'SODIUM ION' NA 7 'CHLORIDE ION' CL 8 "2'-DEOXY-5'-O-[(R)-{[(R)-[(R)-FLUORO(PHOSPHONO)METHYL](HYDROXY)PHOSPHORYL]OXY}(HYDROXY)PHOSPHORYL]GUANOSINE" GFH 9 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2FMP _pdbx_initial_refinement_model.details ? #