HEADER LYASE 26-MAY-07 2Q27 TITLE CRYSTAL STRUCTURE OF OXALYL-COA DECARBOXYLASE FROM ESCHERICHIA COLI COMPND MOL_ID: 1; COMPND 2 MOLECULE: OXALYL-COA DECARBOXYLASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 4.1.1.8; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 STRAIN: K-12; SOURCE 4 GENE: YFDU; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PMS470-115/6/5 KEYWDS LYASE; OXALYL-COA DECARBOXYLASE; OXALATE DEGRADATION; THIAMINE KEYWDS 2 DIPHOSPHATE, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR T.WERTHER,A.ZIMMER,G.WILLE,G.HUBNER,M.S.WEISS,S.KONIG REVDAT 5 21-FEB-24 2Q27 1 REMARK LINK REVDAT 4 18-OCT-17 2Q27 1 REMARK REVDAT 3 18-AUG-10 2Q27 1 JRNL REVDAT 2 24-FEB-09 2Q27 1 VERSN REVDAT 1 03-JUN-08 2Q27 0 JRNL AUTH T.WERTHER,A.ZIMMER,G.WILLE,R.GOLBIK,M.S.WEISS,S.KONIG JRNL TITL NEW INSIGHTS INTO STRUCTURE-FUNCTION RELATIONSHIPS OF OXALYL JRNL TITL 2 COA DECARBOXYLASE FROM ESCHERICHIA COLI. JRNL REF FEBS J. V. 277 2628 2010 JRNL REFN ISSN 1742-464X JRNL PMID 20553497 JRNL DOI 10.1111/J.1742-464X.2010.07673.X REMARK 2 REMARK 2 RESOLUTION. 2.12 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.12 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 18.31 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 3 NUMBER OF REFLECTIONS : 78322 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.195 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.237 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3939 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.12 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.17 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5466 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.55 REMARK 3 BIN R VALUE (WORKING SET) : 0.2580 REMARK 3 BIN FREE R VALUE SET COUNT : 299 REMARK 3 BIN FREE R VALUE : 0.3020 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 8234 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 131 REMARK 3 SOLVENT ATOMS : 433 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 36.97 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : -0.01000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.199 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.178 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.132 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.085 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.959 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.939 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 8505 ; 0.023 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 11567 ; 1.908 ; 1.980 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1090 ; 6.360 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 354 ;38.586 ;24.576 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1381 ;15.374 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 52 ;19.121 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1317 ; 0.128 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6400 ; 0.009 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 4068 ; 0.216 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 5837 ; 0.309 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 568 ; 0.146 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 3 ; 0.038 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 135 ; 0.236 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 47 ; 0.188 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 5600 ; 1.139 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 8709 ; 1.779 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3303 ; 2.982 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2858 ; 4.438 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2Q27 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-JUN-07. REMARK 100 THE DEPOSITION ID IS D_1000043055. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-DEC-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : EMBL/DESY, HAMBURG REMARK 200 BEAMLINE : X12 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.93001 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI[111], REMARK 200 HORIZONTALLY FOCUSSING REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 225 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 80614 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.120 REMARK 200 RESOLUTION RANGE LOW (A) : 99.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 7.000 REMARK 200 R MERGE (I) : 0.10700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.12 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.16 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 5.60 REMARK 200 R MERGE FOR SHELL (I) : 0.73900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.01 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.93 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.5M AMMONIUM SULFATE, 0.0025M REMARK 280 THIAMINE DIPHOSPHATE, 0.0025 MM MAGNESIUM SULFATE, PH 6.5, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 281K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 73.99000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 73.99000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 66.05500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 72.72000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 66.05500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 72.72000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 73.99000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 66.05500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 72.72000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 73.99000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 66.05500 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 72.72000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A TETRAMER (DIMER OF DIMERS) REMARK 300 GENERATED FROM DIMER IN THE ASYMMETRIC UNIT BY THE OPERATIONS: -X, REMARK 300 Y, -1/2-Z REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 31760 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 64430 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -427.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -73.99000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A6219 LIES ON A SPECIAL POSITION. REMARK 375 HOH B6187 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 ASP A 3 REMARK 465 GLN A 4 REMARK 465 HIS A 552 REMARK 465 ILE A 553 REMARK 465 THR A 554 REMARK 465 LYS A 555 REMARK 465 LEU A 556 REMARK 465 ASN A 557 REMARK 465 PRO A 558 REMARK 465 LYS A 559 REMARK 465 GLN A 560 REMARK 465 VAL A 561 REMARK 465 ALA A 562 REMARK 465 GLY A 563 REMARK 465 ASN A 564 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 ASP B 3 REMARK 465 GLN B 4 REMARK 465 SER B 550 REMARK 465 GLY B 551 REMARK 465 HIS B 552 REMARK 465 ILE B 553 REMARK 465 THR B 554 REMARK 465 LYS B 555 REMARK 465 LEU B 556 REMARK 465 ASN B 557 REMARK 465 PRO B 558 REMARK 465 LYS B 559 REMARK 465 GLN B 560 REMARK 465 VAL B 561 REMARK 465 ALA B 562 REMARK 465 GLY B 563 REMARK 465 ASN B 564 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 229 CG GLU A 229 CD 0.107 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 52 NE - CZ - NH2 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG B 39 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 ASP B 107 CB - CG - OD1 ANGL. DEV. = 5.5 DEGREES REMARK 500 LEU B 243 CB - CG - CD1 ANGL. DEV. = -11.2 DEGREES REMARK 500 ASP B 346 CB - CG - OD1 ANGL. DEV. = 5.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 77 -163.73 -74.69 REMARK 500 SER A 78 -150.99 -85.19 REMARK 500 SER A 106 -149.46 -89.61 REMARK 500 LEU A 121 136.39 -175.56 REMARK 500 ASN A 189 71.58 45.41 REMARK 500 ALA A 227 41.42 -91.81 REMARK 500 ASN A 282 -167.99 -101.98 REMARK 500 LYS A 289 -95.62 -103.72 REMARK 500 ASN A 311 -72.76 -120.97 REMARK 500 ALA A 396 -80.56 -116.94 REMARK 500 SER A 453 10.07 -142.41 REMARK 500 TYR A 478 -52.02 76.15 REMARK 500 ARG A 501 79.15 -113.59 REMARK 500 ALA B 79 -66.59 -22.33 REMARK 500 SER B 106 -157.58 -77.01 REMARK 500 ALA B 227 41.26 -90.06 REMARK 500 LYS B 289 -92.08 -113.25 REMARK 500 ASN B 311 -67.63 -129.89 REMARK 500 ASN B 336 57.44 -152.18 REMARK 500 ALA B 396 -85.11 -112.48 REMARK 500 TYR B 478 -60.02 77.81 REMARK 500 LEU B 485 6.56 -69.80 REMARK 500 HIS B 498 114.81 -39.14 REMARK 500 ARG B 510 41.21 70.81 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1001 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 447 OD1 REMARK 620 2 ASN A 474 OD1 86.9 REMARK 620 3 GLY A 476 O 98.6 88.9 REMARK 620 4 TPP A3001 O2A 86.7 169.7 100.1 REMARK 620 5 TPP A3001 O3B 165.1 94.0 96.3 90.1 REMARK 620 6 HOH A6012 O 82.1 81.0 169.8 90.2 83.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B1002 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 447 OD1 REMARK 620 2 ASN B 474 OD1 86.4 REMARK 620 3 GLY B 476 O 103.8 84.3 REMARK 620 4 TPP B4001 O1B 155.6 85.3 98.1 REMARK 620 5 TPP B4001 O2A 91.1 164.6 110.9 90.8 REMARK 620 6 HOH B6081 O 77.5 76.2 160.4 78.3 88.5 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 2001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 2002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 2005 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 2006 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 2007 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 2008 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 2009 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TPP A 3001 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TPP B 4001 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 5001 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 5002 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MES A 6001 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MES B 6002 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2Q28 RELATED DB: PDB REMARK 900 RELATED ID: 2Q29 RELATED DB: PDB DBREF 2Q27 A 1 564 UNP P0AFI0 OXC_ECOLI 1 564 DBREF 2Q27 B 1 564 UNP P0AFI0 OXC_ECOLI 1 564 SEQRES 1 A 564 MET SER ASP GLN LEU GLN MET THR ASP GLY MET HIS ILE SEQRES 2 A 564 ILE VAL GLU ALA LEU LYS GLN ASN ASN ILE ASP THR ILE SEQRES 3 A 564 TYR GLY VAL VAL GLY ILE PRO VAL THR ASP MET ALA ARG SEQRES 4 A 564 HIS ALA GLN ALA GLU GLY ILE ARG TYR ILE GLY PHE ARG SEQRES 5 A 564 HIS GLU GLN SER ALA GLY TYR ALA ALA ALA ALA SER GLY SEQRES 6 A 564 PHE LEU THR GLN LYS PRO GLY ILE CYS LEU THR VAL SER SEQRES 7 A 564 ALA PRO GLY PHE LEU ASN GLY LEU THR ALA LEU ALA ASN SEQRES 8 A 564 ALA THR VAL ASN GLY PHE PRO MET ILE MET ILE SER GLY SEQRES 9 A 564 SER SER ASP ARG ALA ILE VAL ASP LEU GLN GLN GLY ASP SEQRES 10 A 564 TYR GLU GLU LEU ASP GLN MET ASN ALA ALA LYS PRO TYR SEQRES 11 A 564 ALA LYS ALA ALA PHE ARG VAL ASN GLN PRO GLN ASP LEU SEQRES 12 A 564 GLY ILE ALA LEU ALA ARG ALA ILE ARG VAL SER VAL SER SEQRES 13 A 564 GLY ARG PRO GLY GLY VAL TYR LEU ASP LEU PRO ALA ASN SEQRES 14 A 564 VAL LEU ALA ALA THR MET GLU LYS ASP GLU ALA LEU THR SEQRES 15 A 564 THR ILE VAL LYS VAL GLU ASN PRO SER PRO ALA LEU LEU SEQRES 16 A 564 PRO CYS PRO LYS SER VAL THR SER ALA ILE SER LEU LEU SEQRES 17 A 564 ALA LYS ALA GLU ARG PRO LEU ILE ILE LEU GLY LYS GLY SEQRES 18 A 564 ALA ALA TYR SER GLN ALA ASP GLU GLN LEU ARG GLU PHE SEQRES 19 A 564 ILE GLU SER ALA GLN ILE PRO PHE LEU PRO MET SER MET SEQRES 20 A 564 ALA LYS GLY ILE LEU GLU ASP THR HIS PRO LEU SER ALA SEQRES 21 A 564 ALA ALA ALA ARG SER PHE ALA LEU ALA ASN ALA ASP VAL SEQRES 22 A 564 VAL MET LEU VAL GLY ALA ARG LEU ASN TRP LEU LEU ALA SEQRES 23 A 564 HIS GLY LYS LYS GLY TRP ALA ALA ASP THR GLN PHE ILE SEQRES 24 A 564 GLN LEU ASP ILE GLU PRO GLN GLU ILE ASP SER ASN ARG SEQRES 25 A 564 PRO ILE ALA VAL PRO VAL VAL GLY ASP ILE ALA SER SER SEQRES 26 A 564 MET GLN GLY MET LEU ALA GLU LEU LYS GLN ASN THR PHE SEQRES 27 A 564 THR THR PRO LEU VAL TRP ARG ASP ILE LEU ASN ILE HIS SEQRES 28 A 564 LYS GLN GLN ASN ALA GLN LYS MET HIS GLU LYS LEU SER SEQRES 29 A 564 THR ASP THR GLN PRO LEU ASN TYR PHE ASN ALA LEU SER SEQRES 30 A 564 ALA VAL ARG ASP VAL LEU ARG GLU ASN GLN ASP ILE TYR SEQRES 31 A 564 LEU VAL ASN GLU GLY ALA ASN THR LEU ASP ASN ALA ARG SEQRES 32 A 564 ASN ILE ILE ASP MET TYR LYS PRO ARG ARG ARG LEU ASP SEQRES 33 A 564 CYS GLY THR TRP GLY VAL MET GLY ILE GLY MET GLY TYR SEQRES 34 A 564 ALA ILE GLY ALA SER VAL THR SER GLY SER PRO VAL VAL SEQRES 35 A 564 ALA ILE GLU GLY ASP SER ALA PHE GLY PHE SER GLY MET SEQRES 36 A 564 GLU ILE GLU THR ILE CYS ARG TYR ASN LEU PRO VAL THR SEQRES 37 A 564 ILE VAL ILE PHE ASN ASN GLY GLY ILE TYR ARG GLY ASP SEQRES 38 A 564 GLY VAL ASP LEU SER GLY ALA GLY ALA PRO SER PRO THR SEQRES 39 A 564 ASP LEU LEU HIS HIS ALA ARG TYR ASP LYS LEU MET ASP SEQRES 40 A 564 ALA PHE ARG GLY VAL GLY TYR ASN VAL THR THR THR ASP SEQRES 41 A 564 GLU LEU ARG HIS ALA LEU THR THR GLY ILE GLN SER ARG SEQRES 42 A 564 LYS PRO THR ILE ILE ASN VAL VAL ILE ASP PRO ALA ALA SEQRES 43 A 564 GLY THR GLU SER GLY HIS ILE THR LYS LEU ASN PRO LYS SEQRES 44 A 564 GLN VAL ALA GLY ASN SEQRES 1 B 564 MET SER ASP GLN LEU GLN MET THR ASP GLY MET HIS ILE SEQRES 2 B 564 ILE VAL GLU ALA LEU LYS GLN ASN ASN ILE ASP THR ILE SEQRES 3 B 564 TYR GLY VAL VAL GLY ILE PRO VAL THR ASP MET ALA ARG SEQRES 4 B 564 HIS ALA GLN ALA GLU GLY ILE ARG TYR ILE GLY PHE ARG SEQRES 5 B 564 HIS GLU GLN SER ALA GLY TYR ALA ALA ALA ALA SER GLY SEQRES 6 B 564 PHE LEU THR GLN LYS PRO GLY ILE CYS LEU THR VAL SER SEQRES 7 B 564 ALA PRO GLY PHE LEU ASN GLY LEU THR ALA LEU ALA ASN SEQRES 8 B 564 ALA THR VAL ASN GLY PHE PRO MET ILE MET ILE SER GLY SEQRES 9 B 564 SER SER ASP ARG ALA ILE VAL ASP LEU GLN GLN GLY ASP SEQRES 10 B 564 TYR GLU GLU LEU ASP GLN MET ASN ALA ALA LYS PRO TYR SEQRES 11 B 564 ALA LYS ALA ALA PHE ARG VAL ASN GLN PRO GLN ASP LEU SEQRES 12 B 564 GLY ILE ALA LEU ALA ARG ALA ILE ARG VAL SER VAL SER SEQRES 13 B 564 GLY ARG PRO GLY GLY VAL TYR LEU ASP LEU PRO ALA ASN SEQRES 14 B 564 VAL LEU ALA ALA THR MET GLU LYS ASP GLU ALA LEU THR SEQRES 15 B 564 THR ILE VAL LYS VAL GLU ASN PRO SER PRO ALA LEU LEU SEQRES 16 B 564 PRO CYS PRO LYS SER VAL THR SER ALA ILE SER LEU LEU SEQRES 17 B 564 ALA LYS ALA GLU ARG PRO LEU ILE ILE LEU GLY LYS GLY SEQRES 18 B 564 ALA ALA TYR SER GLN ALA ASP GLU GLN LEU ARG GLU PHE SEQRES 19 B 564 ILE GLU SER ALA GLN ILE PRO PHE LEU PRO MET SER MET SEQRES 20 B 564 ALA LYS GLY ILE LEU GLU ASP THR HIS PRO LEU SER ALA SEQRES 21 B 564 ALA ALA ALA ARG SER PHE ALA LEU ALA ASN ALA ASP VAL SEQRES 22 B 564 VAL MET LEU VAL GLY ALA ARG LEU ASN TRP LEU LEU ALA SEQRES 23 B 564 HIS GLY LYS LYS GLY TRP ALA ALA ASP THR GLN PHE ILE SEQRES 24 B 564 GLN LEU ASP ILE GLU PRO GLN GLU ILE ASP SER ASN ARG SEQRES 25 B 564 PRO ILE ALA VAL PRO VAL VAL GLY ASP ILE ALA SER SER SEQRES 26 B 564 MET GLN GLY MET LEU ALA GLU LEU LYS GLN ASN THR PHE SEQRES 27 B 564 THR THR PRO LEU VAL TRP ARG ASP ILE LEU ASN ILE HIS SEQRES 28 B 564 LYS GLN GLN ASN ALA GLN LYS MET HIS GLU LYS LEU SER SEQRES 29 B 564 THR ASP THR GLN PRO LEU ASN TYR PHE ASN ALA LEU SER SEQRES 30 B 564 ALA VAL ARG ASP VAL LEU ARG GLU ASN GLN ASP ILE TYR SEQRES 31 B 564 LEU VAL ASN GLU GLY ALA ASN THR LEU ASP ASN ALA ARG SEQRES 32 B 564 ASN ILE ILE ASP MET TYR LYS PRO ARG ARG ARG LEU ASP SEQRES 33 B 564 CYS GLY THR TRP GLY VAL MET GLY ILE GLY MET GLY TYR SEQRES 34 B 564 ALA ILE GLY ALA SER VAL THR SER GLY SER PRO VAL VAL SEQRES 35 B 564 ALA ILE GLU GLY ASP SER ALA PHE GLY PHE SER GLY MET SEQRES 36 B 564 GLU ILE GLU THR ILE CYS ARG TYR ASN LEU PRO VAL THR SEQRES 37 B 564 ILE VAL ILE PHE ASN ASN GLY GLY ILE TYR ARG GLY ASP SEQRES 38 B 564 GLY VAL ASP LEU SER GLY ALA GLY ALA PRO SER PRO THR SEQRES 39 B 564 ASP LEU LEU HIS HIS ALA ARG TYR ASP LYS LEU MET ASP SEQRES 40 B 564 ALA PHE ARG GLY VAL GLY TYR ASN VAL THR THR THR ASP SEQRES 41 B 564 GLU LEU ARG HIS ALA LEU THR THR GLY ILE GLN SER ARG SEQRES 42 B 564 LYS PRO THR ILE ILE ASN VAL VAL ILE ASP PRO ALA ALA SEQRES 43 B 564 GLY THR GLU SER GLY HIS ILE THR LYS LEU ASN PRO LYS SEQRES 44 B 564 GLN VAL ALA GLY ASN HET MG A1001 1 HET SO4 A2001 5 HET SO4 A2003 5 HET SO4 A2006 5 HET SO4 A2008 5 HET SO4 A2009 5 HET TPP A3001 26 HET EDO A5002 4 HET MES A6001 12 HET MG B1002 1 HET SO4 B2002 5 HET SO4 B2004 5 HET SO4 B2005 5 HET SO4 B2007 5 HET TPP B4001 26 HET EDO B5001 4 HET MES B6002 12 HETNAM MG MAGNESIUM ION HETNAM SO4 SULFATE ION HETNAM TPP THIAMINE DIPHOSPHATE HETNAM EDO 1,2-ETHANEDIOL HETNAM MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID HETSYN EDO ETHYLENE GLYCOL FORMUL 3 MG 2(MG 2+) FORMUL 4 SO4 9(O4 S 2-) FORMUL 9 TPP 2(C12 H19 N4 O7 P2 S 1+) FORMUL 10 EDO 2(C2 H6 O2) FORMUL 11 MES 2(C6 H13 N O4 S) FORMUL 20 HOH *433(H2 O) HELIX 1 1 GLY A 10 ASN A 21 1 12 HELIX 2 2 VAL A 34 GLU A 44 1 11 HELIX 3 3 HIS A 53 GLN A 69 1 17 HELIX 4 4 SER A 78 GLY A 96 1 19 HELIX 5 5 ASP A 107 LEU A 113 1 7 HELIX 6 6 ASP A 122 LYS A 128 1 7 HELIX 7 7 PRO A 129 ALA A 131 5 3 HELIX 8 8 GLN A 139 GLN A 141 5 3 HELIX 9 9 ASP A 142 SER A 156 1 15 HELIX 10 10 ALA A 168 ALA A 173 1 6 HELIX 11 11 LYS A 177 THR A 183 1 7 HELIX 12 12 CYS A 197 ALA A 211 1 15 HELIX 13 13 GLY A 219 GLN A 226 1 8 HELIX 14 14 ALA A 227 GLN A 239 1 13 HELIX 15 15 SER A 246 LYS A 249 5 4 HELIX 16 16 ALA A 260 ALA A 262 5 3 HELIX 17 17 ALA A 263 ALA A 271 1 9 HELIX 18 18 ASN A 282 LYS A 289 5 8 HELIX 19 19 GLU A 304 ILE A 308 5 5 HELIX 20 20 ASP A 321 ASN A 336 1 16 HELIX 21 21 PRO A 341 THR A 365 1 25 HELIX 22 22 ASN A 371 GLU A 385 1 15 HELIX 23 23 ALA A 396 ILE A 406 1 11 HELIX 24 24 GLY A 418 GLY A 421 5 4 HELIX 25 25 ILE A 425 GLY A 438 1 14 HELIX 26 26 ASP A 447 PHE A 452 1 6 HELIX 27 27 SER A 453 MET A 455 5 3 HELIX 28 28 GLU A 456 TYR A 463 1 8 HELIX 29 29 ARG A 501 ARG A 510 5 10 HELIX 30 30 THR A 518 ARG A 533 1 16 HELIX 31 31 GLY B 10 ASN B 21 1 12 HELIX 32 32 VAL B 34 GLU B 44 1 11 HELIX 33 33 HIS B 53 GLN B 69 1 17 HELIX 34 34 SER B 78 GLY B 96 1 19 HELIX 35 35 ASP B 107 LEU B 113 1 7 HELIX 36 36 ASP B 122 LYS B 128 1 7 HELIX 37 37 PRO B 129 ALA B 131 5 3 HELIX 38 38 GLN B 139 GLN B 141 5 3 HELIX 39 39 ASP B 142 SER B 156 1 15 HELIX 40 40 ALA B 168 ALA B 173 1 6 HELIX 41 41 LYS B 177 THR B 182 1 6 HELIX 42 42 CYS B 197 LYS B 210 1 14 HELIX 43 43 GLY B 219 GLN B 226 1 8 HELIX 44 44 ALA B 227 ALA B 238 1 12 HELIX 45 45 SER B 246 LYS B 249 5 4 HELIX 46 46 ALA B 260 ALA B 262 5 3 HELIX 47 47 ALA B 263 ALA B 271 1 9 HELIX 48 48 ASN B 282 LYS B 289 5 8 HELIX 49 49 GLU B 304 ILE B 308 5 5 HELIX 50 50 ASP B 321 ASN B 336 1 16 HELIX 51 51 PRO B 341 THR B 365 1 25 HELIX 52 52 ASN B 371 GLU B 385 1 15 HELIX 53 53 ALA B 396 ILE B 406 1 11 HELIX 54 54 ILE B 425 GLY B 438 1 14 HELIX 55 55 ASP B 447 GLY B 451 1 5 HELIX 56 56 PHE B 452 MET B 455 5 4 HELIX 57 57 GLU B 456 ASN B 464 1 9 HELIX 58 58 ARG B 501 ARG B 510 5 10 HELIX 59 59 THR B 518 ARG B 533 1 16 SHEET 1 A 2 MET A 7 ASP A 9 0 SHEET 2 A 2 THR A 174 GLU A 176 -1 O MET A 175 N THR A 8 SHEET 1 B 6 ARG A 47 GLY A 50 0 SHEET 2 B 6 THR A 25 GLY A 28 1 N ILE A 26 O ILE A 49 SHEET 3 B 6 GLY A 72 THR A 76 1 O LEU A 75 N TYR A 27 SHEET 4 B 6 MET A 99 SER A 105 1 O ILE A 102 N CYS A 74 SHEET 5 B 6 GLY A 161 PRO A 167 1 O LEU A 164 N MET A 101 SHEET 6 B 6 ALA A 133 ARG A 136 1 N PHE A 135 O TYR A 163 SHEET 1 C 2 LEU A 194 PRO A 196 0 SHEET 2 C 2 LEU B 194 PRO B 196 -1 O LEU B 195 N LEU A 195 SHEET 1 D 5 PHE A 242 PRO A 244 0 SHEET 2 D 5 PRO A 214 LEU A 218 1 N ILE A 216 O LEU A 243 SHEET 3 D 5 VAL A 273 VAL A 277 1 O MET A 275 N ILE A 217 SHEET 4 D 5 GLN A 297 ASP A 302 1 O ILE A 299 N LEU A 276 SHEET 5 D 5 VAL A 316 VAL A 319 1 O VAL A 318 N GLN A 300 SHEET 1 E 6 ARG A 414 ASP A 416 0 SHEET 2 E 6 TYR A 390 GLU A 394 1 N LEU A 391 O LEU A 415 SHEET 3 E 6 VAL A 441 GLY A 446 1 O ILE A 444 N VAL A 392 SHEET 4 E 6 VAL A 467 ASN A 473 1 O VAL A 470 N ALA A 443 SHEET 5 E 6 THR A 536 VAL A 541 1 O ILE A 538 N ILE A 469 SHEET 6 E 6 VAL A 512 VAL A 516 1 N VAL A 516 O ASN A 539 SHEET 1 F 2 MET B 7 ASP B 9 0 SHEET 2 F 2 THR B 174 GLU B 176 -1 O MET B 175 N THR B 8 SHEET 1 G 6 ARG B 47 GLY B 50 0 SHEET 2 G 6 THR B 25 GLY B 28 1 N ILE B 26 O ILE B 49 SHEET 3 G 6 GLY B 72 THR B 76 1 O ILE B 73 N TYR B 27 SHEET 4 G 6 MET B 99 SER B 105 1 O ILE B 102 N CYS B 74 SHEET 5 G 6 GLY B 161 PRO B 167 1 O LEU B 164 N MET B 101 SHEET 6 G 6 ALA B 133 ARG B 136 1 N PHE B 135 O TYR B 163 SHEET 1 H 5 PHE B 242 PRO B 244 0 SHEET 2 H 5 PRO B 214 LEU B 218 1 N LEU B 218 O LEU B 243 SHEET 3 H 5 VAL B 273 VAL B 277 1 O MET B 275 N LEU B 215 SHEET 4 H 5 GLN B 297 ASP B 302 1 O ILE B 299 N LEU B 276 SHEET 5 H 5 VAL B 316 VAL B 319 1 O VAL B 318 N GLN B 300 SHEET 1 I 6 ARG B 414 ASP B 416 0 SHEET 2 I 6 TYR B 390 GLU B 394 1 N LEU B 391 O LEU B 415 SHEET 3 I 6 VAL B 441 GLY B 446 1 O ILE B 444 N VAL B 392 SHEET 4 I 6 VAL B 467 ASN B 473 1 O VAL B 470 N ALA B 443 SHEET 5 I 6 THR B 536 VAL B 541 1 O THR B 536 N ILE B 469 SHEET 6 I 6 VAL B 512 VAL B 516 1 N TYR B 514 O ASN B 539 LINK OD1 ASP A 447 MG MG A1001 1555 1555 1.98 LINK OD1 ASN A 474 MG MG A1001 1555 1555 2.15 LINK O GLY A 476 MG MG A1001 1555 1555 2.06 LINK MG MG A1001 O2A TPP A3001 1555 1555 1.98 LINK MG MG A1001 O3B TPP A3001 1555 1555 2.06 LINK MG MG A1001 O HOH A6012 1555 1555 2.38 LINK OD1 ASP B 447 MG MG B1002 1555 1555 2.08 LINK OD1 ASN B 474 MG MG B1002 1555 1555 2.27 LINK O GLY B 476 MG MG B1002 1555 1555 1.93 LINK MG MG B1002 O1B TPP B4001 1555 1555 2.14 LINK MG MG B1002 O2A TPP B4001 1555 1555 1.99 LINK MG MG B1002 O HOH B6081 1555 1555 2.24 CISPEP 1 ILE A 32 PRO A 33 0 -7.17 CISPEP 2 GLN A 368 PRO A 369 0 2.68 CISPEP 3 ILE B 32 PRO B 33 0 -3.80 CISPEP 4 GLN B 368 PRO B 369 0 1.31 SITE 1 AC1 4 ASP A 447 ASN A 474 GLY A 476 HOH A6012 SITE 1 AC2 4 ASP B 447 ASN B 474 GLY B 476 HOH B6081 SITE 1 AC3 5 MET A 245 SER A 246 ARG A 264 ARG A 403 SITE 2 AC3 5 HOH A6152 SITE 1 AC4 5 MET B 245 SER B 246 ARG B 264 ARG B 403 SITE 2 AC4 5 HOH B6188 SITE 1 AC5 4 ALA B 263 PHE B 266 HIS B 351 ASN B 355 SITE 1 AC6 4 PHE A 266 HIS A 351 GLN A 354 ASN A 355 SITE 1 AC7 6 ARG B 158 LYS B 220 GLY B 221 GLY B 278 SITE 2 AC7 6 ALA B 279 ARG B 280 SITE 1 AC8 5 LYS A 220 GLY A 221 GLY A 278 ARG A 280 SITE 2 AC8 5 HOH A6204 SITE 1 AC9 4 ARG A 158 GLY A 278 ARG A 280 ASP A 302 SITE 1 BC1 21 GLU A 54 PRO A 80 ASN A 84 TYR A 372 SITE 2 BC1 21 GLY A 395 ALA A 396 ASN A 397 THR A 398 SITE 3 BC1 21 GLY A 421 MET A 423 GLY A 446 ASP A 447 SITE 4 BC1 21 SER A 448 ALA A 449 PHE A 452 ASN A 474 SITE 5 BC1 21 GLY A 476 ILE A 477 TYR A 478 HOH A6012 SITE 6 BC1 21 HOH A6239 SITE 1 BC2 20 GLU B 54 ASN B 84 GLU B 119 TYR B 372 SITE 2 BC2 20 GLY B 395 ALA B 396 ASN B 397 THR B 398 SITE 3 BC2 20 GLY B 421 MET B 423 GLY B 446 ASP B 447 SITE 4 BC2 20 SER B 448 ALA B 449 PHE B 452 ASN B 474 SITE 5 BC2 20 GLY B 476 ILE B 477 TYR B 478 HOH B6081 SITE 1 BC3 5 GLY B 221 ASP B 302 ILE B 303 ILE B 322 SITE 2 BC3 5 HOH B6139 SITE 1 BC4 5 GLY A 221 TYR A 224 SER A 225 ILE A 303 SITE 2 BC4 5 ILE A 322 SITE 1 BC5 7 ILE A 32 PRO A 33 THR A 35 ASP A 36 SITE 2 BC5 7 GLU A 549 SER A 550 GLY A 551 SITE 1 BC6 6 GLY B 31 ILE B 32 PRO B 33 THR B 35 SITE 2 BC6 6 ASP B 36 GLU B 549 CRYST1 132.110 145.440 147.980 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007569 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006876 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006758 0.00000