data_2Q2K # _entry.id 2Q2K # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2Q2K pdb_00002q2k 10.2210/pdb2q2k/pdb NDB PD1007 ? ? RCSB RCSB043068 ? ? WWPDB D_1000043068 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-02-05 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2024-02-21 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' struct_conn 5 3 'Structure model' struct_ref_seq_dif 6 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 3 'Structure model' '_struct_ref_seq_dif.details' 5 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 6 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 7 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2Q2K _pdbx_database_status.recvd_initial_deposition_date 2007-05-28 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Schumacher, M.A.' 1 'Glover, T.' 2 'Firth, N.' 3 # _citation.id primary _citation.title 'Segrosome structure revealed by a complex of ParR with centromere DNA.' _citation.journal_abbrev Nature _citation.journal_volume 450 _citation.page_first 1268 _citation.page_last 1271 _citation.year 2007 _citation.journal_id_ASTM NATUAS _citation.country UK _citation.journal_id_ISSN 0028-0836 _citation.journal_id_CSD 0006 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 18097417 _citation.pdbx_database_id_DOI 10.1038/nature06392 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Schumacher, M.A.' 1 ? primary 'Glover, T.C.' 2 ? primary 'Brzoska, A.J.' 3 ? primary 'Jensen, S.O.' 4 ? primary 'Dunham, T.D.' 5 ? primary 'Skurray, R.A.' 6 ? primary 'Firth, N.' 7 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*AP*GP*TP*AP*TP*AP*(5IU)P*AP*CP*(5IU)P*AP*GP*TP*AP*TP*AP*TP*AP*CP*T)-3') ; 6354.755 1 ? ? ? ? 2 polymer man 'Hypothetical protein' 8167.265 2 ? ? ? ? 3 non-polymer syn '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' 238.305 1 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no yes ;(DA)(DG)(DT)(DA)(DT)(DA)(5IU)(DA)(DC)(5IU)(DA)(DG)(DT)(DA)(DT)(DA)(DT)(DA)(DC) (DT) ; AGTATAUACUAGTATATACT F ? 2 'polypeptide(L)' no no MGSSHHHHHHSSGLVPGSHMDKKETKHLLKIKKEDYPQIFDFLENVPRGTKTAHIREALRRYIEEIGENP MGSSHHHHHHSSGLVPGSHMDKKETKHLLKIKKEDYPQIFDFLENVPRGTKTAHIREALRRYIEEIGENP A,B ? # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _pdbx_entity_nonpoly.comp_id EPE # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DA n 1 2 DG n 1 3 DT n 1 4 DA n 1 5 DT n 1 6 DA n 1 7 5IU n 1 8 DA n 1 9 DC n 1 10 5IU n 1 11 DA n 1 12 DG n 1 13 DT n 1 14 DA n 1 15 DT n 1 16 DA n 1 17 DT n 1 18 DA n 1 19 DC n 1 20 DT n 2 1 MET n 2 2 GLY n 2 3 SER n 2 4 SER n 2 5 HIS n 2 6 HIS n 2 7 HIS n 2 8 HIS n 2 9 HIS n 2 10 HIS n 2 11 SER n 2 12 SER n 2 13 GLY n 2 14 LEU n 2 15 VAL n 2 16 PRO n 2 17 GLY n 2 18 SER n 2 19 HIS n 2 20 MET n 2 21 ASP n 2 22 LYS n 2 23 LYS n 2 24 GLU n 2 25 THR n 2 26 LYS n 2 27 HIS n 2 28 LEU n 2 29 LEU n 2 30 LYS n 2 31 ILE n 2 32 LYS n 2 33 LYS n 2 34 GLU n 2 35 ASP n 2 36 TYR n 2 37 PRO n 2 38 GLN n 2 39 ILE n 2 40 PHE n 2 41 ASP n 2 42 PHE n 2 43 LEU n 2 44 GLU n 2 45 ASN n 2 46 VAL n 2 47 PRO n 2 48 ARG n 2 49 GLY n 2 50 THR n 2 51 LYS n 2 52 THR n 2 53 ALA n 2 54 HIS n 2 55 ILE n 2 56 ARG n 2 57 GLU n 2 58 ALA n 2 59 LEU n 2 60 ARG n 2 61 ARG n 2 62 TYR n 2 63 ILE n 2 64 GLU n 2 65 GLU n 2 66 ILE n 2 67 GLY n 2 68 GLU n 2 69 ASN n 2 70 PRO n # _entity_src_gen.entity_id 2 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Staphylococcus _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Staphylococcus aureus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1280 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET15b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 5IU 'DNA linking' n "5-IODO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE" ? 'C9 H12 I N2 O8 P' 434.078 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 EPE non-polymer . '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' HEPES 'C8 H18 N2 O4 S' 238.305 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DA 1 12 12 DA ADE F . n A 1 2 DG 2 13 13 DG GUA F . n A 1 3 DT 3 14 14 DT THY F . n A 1 4 DA 4 15 15 DA ADE F . n A 1 5 DT 5 16 16 DT THY F . n A 1 6 DA 6 17 17 DA ADE F . n A 1 7 5IU 7 18 18 5IU I5U F . n A 1 8 DA 8 19 19 DA ADE F . n A 1 9 DC 9 20 20 DC CYT F . n A 1 10 5IU 10 21 21 5IU I5U F . n A 1 11 DA 11 22 22 DA ADE F . n A 1 12 DG 12 23 23 DG GUA F . n A 1 13 DT 13 24 24 DT THY F . n A 1 14 DA 14 25 25 DA ADE F . n A 1 15 DT 15 26 26 DT THY F . n A 1 16 DA 16 27 27 DA ADE F . n A 1 17 DT 17 28 28 DT THY F . n A 1 18 DA 18 29 29 DA ADE F . n A 1 19 DC 19 30 30 DC CYT F . n A 1 20 DT 20 31 31 DT THY F . n B 2 1 MET 1 -18 ? ? ? A . n B 2 2 GLY 2 -17 ? ? ? A . n B 2 3 SER 3 -16 ? ? ? A . n B 2 4 SER 4 -15 ? ? ? A . n B 2 5 HIS 5 -14 ? ? ? A . n B 2 6 HIS 6 -13 ? ? ? A . n B 2 7 HIS 7 -12 ? ? ? A . n B 2 8 HIS 8 -11 ? ? ? A . n B 2 9 HIS 9 -10 ? ? ? A . n B 2 10 HIS 10 -9 ? ? ? A . n B 2 11 SER 11 -8 ? ? ? A . n B 2 12 SER 12 -7 ? ? ? A . n B 2 13 GLY 13 -6 ? ? ? A . n B 2 14 LEU 14 -5 ? ? ? A . n B 2 15 VAL 15 -4 ? ? ? A . n B 2 16 PRO 16 -3 ? ? ? A . n B 2 17 GLY 17 -2 ? ? ? A . n B 2 18 SER 18 -1 ? ? ? A . n B 2 19 HIS 19 0 ? ? ? A . n B 2 20 MET 20 1 ? ? ? A . n B 2 21 ASP 21 2 ? ? ? A . n B 2 22 LYS 22 3 ? ? ? A . n B 2 23 LYS 23 4 4 LYS LYS A . n B 2 24 GLU 24 5 5 GLU GLU A . n B 2 25 THR 25 6 6 THR THR A . n B 2 26 LYS 26 7 7 LYS LYS A . n B 2 27 HIS 27 8 8 HIS HIS A . n B 2 28 LEU 28 9 9 LEU LEU A . n B 2 29 LEU 29 10 10 LEU LEU A . n B 2 30 LYS 30 11 11 LYS LYS A . n B 2 31 ILE 31 12 12 ILE ILE A . n B 2 32 LYS 32 13 13 LYS LYS A . n B 2 33 LYS 33 14 14 LYS LYS A . n B 2 34 GLU 34 15 15 GLU GLU A . n B 2 35 ASP 35 16 16 ASP ASP A . n B 2 36 TYR 36 17 17 TYR TYR A . n B 2 37 PRO 37 18 18 PRO PRO A . n B 2 38 GLN 38 19 19 GLN GLN A . n B 2 39 ILE 39 20 20 ILE ILE A . n B 2 40 PHE 40 21 21 PHE PHE A . n B 2 41 ASP 41 22 22 ASP ASP A . n B 2 42 PHE 42 23 23 PHE PHE A . n B 2 43 LEU 43 24 24 LEU LEU A . n B 2 44 GLU 44 25 25 GLU GLU A . n B 2 45 ASN 45 26 26 ASN ASN A . n B 2 46 VAL 46 27 27 VAL VAL A . n B 2 47 PRO 47 28 28 PRO PRO A . n B 2 48 ARG 48 29 29 ARG ARG A . n B 2 49 GLY 49 30 30 GLY GLY A . n B 2 50 THR 50 31 31 THR THR A . n B 2 51 LYS 51 32 32 LYS LYS A . n B 2 52 THR 52 33 33 THR THR A . n B 2 53 ALA 53 34 34 ALA ALA A . n B 2 54 HIS 54 35 35 HIS HIS A . n B 2 55 ILE 55 36 36 ILE ILE A . n B 2 56 ARG 56 37 37 ARG ARG A . n B 2 57 GLU 57 38 38 GLU GLU A . n B 2 58 ALA 58 39 39 ALA ALA A . n B 2 59 LEU 59 40 40 LEU LEU A . n B 2 60 ARG 60 41 41 ARG ARG A . n B 2 61 ARG 61 42 42 ARG ARG A . n B 2 62 TYR 62 43 43 TYR TYR A . n B 2 63 ILE 63 44 44 ILE ILE A . n B 2 64 GLU 64 45 45 GLU GLU A . n B 2 65 GLU 65 46 46 GLU GLU A . n B 2 66 ILE 66 47 47 ILE ILE A . n B 2 67 GLY 67 48 48 GLY GLY A . n B 2 68 GLU 68 49 ? ? ? A . n B 2 69 ASN 69 50 ? ? ? A . n B 2 70 PRO 70 51 ? ? ? A . n C 2 1 MET 1 -18 ? ? ? B . n C 2 2 GLY 2 -17 ? ? ? B . n C 2 3 SER 3 -16 ? ? ? B . n C 2 4 SER 4 -15 ? ? ? B . n C 2 5 HIS 5 -14 ? ? ? B . n C 2 6 HIS 6 -13 ? ? ? B . n C 2 7 HIS 7 -12 ? ? ? B . n C 2 8 HIS 8 -11 ? ? ? B . n C 2 9 HIS 9 -10 ? ? ? B . n C 2 10 HIS 10 -9 ? ? ? B . n C 2 11 SER 11 -8 ? ? ? B . n C 2 12 SER 12 -7 ? ? ? B . n C 2 13 GLY 13 -6 ? ? ? B . n C 2 14 LEU 14 -5 ? ? ? B . n C 2 15 VAL 15 -4 ? ? ? B . n C 2 16 PRO 16 -3 ? ? ? B . n C 2 17 GLY 17 -2 ? ? ? B . n C 2 18 SER 18 -1 ? ? ? B . n C 2 19 HIS 19 0 ? ? ? B . n C 2 20 MET 20 1 ? ? ? B . n C 2 21 ASP 21 2 ? ? ? B . n C 2 22 LYS 22 3 ? ? ? B . n C 2 23 LYS 23 4 4 LYS LYS B . n C 2 24 GLU 24 5 5 GLU GLU B . n C 2 25 THR 25 6 6 THR THR B . n C 2 26 LYS 26 7 7 LYS LYS B . n C 2 27 HIS 27 8 8 HIS HIS B . n C 2 28 LEU 28 9 9 LEU LEU B . n C 2 29 LEU 29 10 10 LEU LEU B . n C 2 30 LYS 30 11 11 LYS LYS B . n C 2 31 ILE 31 12 12 ILE ILE B . n C 2 32 LYS 32 13 13 LYS LYS B . n C 2 33 LYS 33 14 14 LYS LYS B . n C 2 34 GLU 34 15 15 GLU GLU B . n C 2 35 ASP 35 16 16 ASP ASP B . n C 2 36 TYR 36 17 17 TYR TYR B . n C 2 37 PRO 37 18 18 PRO PRO B . n C 2 38 GLN 38 19 19 GLN GLN B . n C 2 39 ILE 39 20 20 ILE ILE B . n C 2 40 PHE 40 21 21 PHE PHE B . n C 2 41 ASP 41 22 22 ASP ASP B . n C 2 42 PHE 42 23 23 PHE PHE B . n C 2 43 LEU 43 24 24 LEU LEU B . n C 2 44 GLU 44 25 25 GLU GLU B . n C 2 45 ASN 45 26 26 ASN ASN B . n C 2 46 VAL 46 27 27 VAL VAL B . n C 2 47 PRO 47 28 28 PRO PRO B . n C 2 48 ARG 48 29 29 ARG ARG B . n C 2 49 GLY 49 30 30 GLY GLY B . n C 2 50 THR 50 31 31 THR THR B . n C 2 51 LYS 51 32 32 LYS LYS B . n C 2 52 THR 52 33 33 THR THR B . n C 2 53 ALA 53 34 34 ALA ALA B . n C 2 54 HIS 54 35 35 HIS HIS B . n C 2 55 ILE 55 36 36 ILE ILE B . n C 2 56 ARG 56 37 37 ARG ARG B . n C 2 57 GLU 57 38 38 GLU GLU B . n C 2 58 ALA 58 39 39 ALA ALA B . n C 2 59 LEU 59 40 40 LEU LEU B . n C 2 60 ARG 60 41 41 ARG ARG B . n C 2 61 ARG 61 42 42 ARG ARG B . n C 2 62 TYR 62 43 43 TYR TYR B . n C 2 63 ILE 63 44 44 ILE ILE B . n C 2 64 GLU 64 45 45 GLU GLU B . n C 2 65 GLU 65 46 46 GLU GLU B . n C 2 66 ILE 66 47 47 ILE ILE B . n C 2 67 GLY 67 48 ? ? ? B . n C 2 68 GLU 68 49 ? ? ? B . n C 2 69 ASN 69 50 ? ? ? B . n C 2 70 PRO 70 51 ? ? ? B . n # _pdbx_nonpoly_scheme.asym_id D _pdbx_nonpoly_scheme.entity_id 3 _pdbx_nonpoly_scheme.mon_id EPE _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 3022 _pdbx_nonpoly_scheme.auth_seq_num 3022 _pdbx_nonpoly_scheme.pdb_mon_id EPE _pdbx_nonpoly_scheme.auth_mon_id EPE _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement 1.1 ? 1 ADSC 'data collection' Quantum ? 2 MOSFLM 'data reduction' . ? 3 SCALA 'data scaling' . ? 4 SOLVE phasing . ? 5 # _cell.entry_id 2Q2K _cell.length_a 56.300 _cell.length_b 56.300 _cell.length_c 232.500 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2Q2K _symmetry.space_group_name_H-M 'P 65 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? # _exptl.entry_id 2Q2K _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.32 _exptl_crystal.density_percent_sol 47.06 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details 'PEG 4000, isopropanol, HEPES, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 'PEG 4000' ? ? ? 1 2 1 isopropanol ? ? ? 1 3 1 HEPES ? ? ? 1 4 2 'PEG 4000' ? ? ? 1 5 2 isopropanol ? ? ? 1 6 2 HEPES ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2007-04-04 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator graphite _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.03 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 8.3.1' _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 8.3.1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.03 # _reflns.entry_id 2Q2K _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0.0 _reflns.d_resolution_low 77.6 _reflns.d_resolution_high 3.0 _reflns.number_obs 4506 _reflns.number_all 4650 _reflns.percent_possible_obs 97. _reflns.pdbx_Rmerge_I_obs 0.058 _reflns.pdbx_Rsym_value 0.06 _reflns.pdbx_netI_over_sigmaI 15.0 _reflns.B_iso_Wilson_estimate 87.0 _reflns.pdbx_redundancy 3.0 _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 3.00 _reflns_shell.d_res_low 3.19 _reflns_shell.percent_possible_all 97 _reflns_shell.Rmerge_I_obs .372 _reflns_shell.pdbx_Rsym_value 0.365 _reflns_shell.meanI_over_sigI_obs 2.1 _reflns_shell.pdbx_redundancy 3 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 450 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 2Q2K _refine.ls_number_reflns_obs 4506 _refine.ls_number_reflns_all 4650 _refine.pdbx_ls_sigma_I 0.0 _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 1236191.32 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 41.27 _refine.ls_d_res_high 3.00 _refine.ls_percent_reflns_obs 91.7 _refine.ls_R_factor_obs 0.258 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.258 _refine.ls_R_factor_R_free 0.297 _refine.ls_R_factor_R_free_error 0.014 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 9.5 _refine.ls_number_reflns_R_free 426 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 77.4 _refine.aniso_B[1][1] 8.22 _refine.aniso_B[2][2] 8.22 _refine.aniso_B[3][3] -16.43 _refine.aniso_B[1][2] 21.74 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.342795 _refine.solvent_model_param_bsol 50.0649 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MIR _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 2Q2K _refine_analyze.Luzzati_coordinate_error_obs 0.46 _refine_analyze.Luzzati_sigma_a_obs 0.58 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.55 _refine_analyze.Luzzati_sigma_a_free 0.52 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 762 _refine_hist.pdbx_number_atoms_nucleic_acid 407 _refine_hist.pdbx_number_atoms_ligand 15 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 1184 _refine_hist.d_res_high 3.00 _refine_hist.d_res_low 41.27 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.011 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.6 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 20.8 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 1.29 ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 2.63 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 4.47 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 3.66 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 5.69 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 3.00 _refine_ls_shell.d_res_low 3.19 _refine_ls_shell.number_reflns_R_work 492 _refine_ls_shell.R_factor_R_work 0.423 _refine_ls_shell.percent_reflns_obs 69.5 _refine_ls_shell.R_factor_R_free 0.385 _refine_ls_shell.R_factor_R_free_error 0.061 _refine_ls_shell.percent_reflns_R_free 9.1 _refine_ls_shell.number_reflns_R_free 49 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 450 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 protein_rep.param protein.top 'X-RAY DIFFRACTION' 2 water_rep.param water.top 'X-RAY DIFFRACTION' 3 ion.param ion.top 'X-RAY DIFFRACTION' 4 dna-rna.param.txt dna-rna.top 'X-RAY DIFFRACTION' 5 hepes.param hepes.top 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 2Q2K _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 2Q2K _struct.title 'Structure of nucleic-acid binding protein' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2Q2K _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN/DNA' _struct_keywords.text 'protein-DNA, partition, segregation, parB, DNA BINDING PROTEIN-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP Q2FDA3_STAA3 Q2FDA3 2 MDKKETKHLLKIKKEDYPQIFDFLENVPRGTKTAHIREALRRYIEEIGENP 1 ? 2 PDB 2Q2K 2Q2K 1 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2Q2K A 20 ? 70 ? Q2FDA3 1 ? 51 ? 1 51 2 1 2Q2K B 20 ? 70 ? Q2FDA3 1 ? 51 ? 1 51 3 2 2Q2K F 1 ? 20 ? 2Q2K 12 ? 31 ? 12 31 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2Q2K MET A 1 ? UNP Q2FDA3 ? ? 'expression tag' -18 1 1 2Q2K GLY A 2 ? UNP Q2FDA3 ? ? 'expression tag' -17 2 1 2Q2K SER A 3 ? UNP Q2FDA3 ? ? 'expression tag' -16 3 1 2Q2K SER A 4 ? UNP Q2FDA3 ? ? 'expression tag' -15 4 1 2Q2K HIS A 5 ? UNP Q2FDA3 ? ? 'expression tag' -14 5 1 2Q2K HIS A 6 ? UNP Q2FDA3 ? ? 'expression tag' -13 6 1 2Q2K HIS A 7 ? UNP Q2FDA3 ? ? 'expression tag' -12 7 1 2Q2K HIS A 8 ? UNP Q2FDA3 ? ? 'expression tag' -11 8 1 2Q2K HIS A 9 ? UNP Q2FDA3 ? ? 'expression tag' -10 9 1 2Q2K HIS A 10 ? UNP Q2FDA3 ? ? 'expression tag' -9 10 1 2Q2K SER A 11 ? UNP Q2FDA3 ? ? 'expression tag' -8 11 1 2Q2K SER A 12 ? UNP Q2FDA3 ? ? 'expression tag' -7 12 1 2Q2K GLY A 13 ? UNP Q2FDA3 ? ? 'expression tag' -6 13 1 2Q2K LEU A 14 ? UNP Q2FDA3 ? ? 'expression tag' -5 14 1 2Q2K VAL A 15 ? UNP Q2FDA3 ? ? 'expression tag' -4 15 1 2Q2K PRO A 16 ? UNP Q2FDA3 ? ? 'expression tag' -3 16 1 2Q2K GLY A 17 ? UNP Q2FDA3 ? ? 'expression tag' -2 17 1 2Q2K SER A 18 ? UNP Q2FDA3 ? ? 'expression tag' -1 18 1 2Q2K HIS A 19 ? UNP Q2FDA3 ? ? 'expression tag' 0 19 2 2Q2K MET B 1 ? UNP Q2FDA3 ? ? 'expression tag' -18 20 2 2Q2K GLY B 2 ? UNP Q2FDA3 ? ? 'expression tag' -17 21 2 2Q2K SER B 3 ? UNP Q2FDA3 ? ? 'expression tag' -16 22 2 2Q2K SER B 4 ? UNP Q2FDA3 ? ? 'expression tag' -15 23 2 2Q2K HIS B 5 ? UNP Q2FDA3 ? ? 'expression tag' -14 24 2 2Q2K HIS B 6 ? UNP Q2FDA3 ? ? 'expression tag' -13 25 2 2Q2K HIS B 7 ? UNP Q2FDA3 ? ? 'expression tag' -12 26 2 2Q2K HIS B 8 ? UNP Q2FDA3 ? ? 'expression tag' -11 27 2 2Q2K HIS B 9 ? UNP Q2FDA3 ? ? 'expression tag' -10 28 2 2Q2K HIS B 10 ? UNP Q2FDA3 ? ? 'expression tag' -9 29 2 2Q2K SER B 11 ? UNP Q2FDA3 ? ? 'expression tag' -8 30 2 2Q2K SER B 12 ? UNP Q2FDA3 ? ? 'expression tag' -7 31 2 2Q2K GLY B 13 ? UNP Q2FDA3 ? ? 'expression tag' -6 32 2 2Q2K LEU B 14 ? UNP Q2FDA3 ? ? 'expression tag' -5 33 2 2Q2K VAL B 15 ? UNP Q2FDA3 ? ? 'expression tag' -4 34 2 2Q2K PRO B 16 ? UNP Q2FDA3 ? ? 'expression tag' -3 35 2 2Q2K GLY B 17 ? UNP Q2FDA3 ? ? 'expression tag' -2 36 2 2Q2K SER B 18 ? UNP Q2FDA3 ? ? 'expression tag' -1 37 2 2Q2K HIS B 19 ? UNP Q2FDA3 ? ? 'expression tag' 0 38 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 10_665 -y+1,-x+1,-z+1/6 0.5000000000 -0.8660254038 0.0000000000 28.1500000000 -0.8660254038 -0.5000000000 0.0000000000 48.7572302331 0.0000000000 0.0000000000 -1.0000000000 38.7500000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 TYR B 36 ? GLU B 44 ? TYR A 17 GLU A 25 1 ? 9 HELX_P HELX_P2 2 THR B 50 ? ILE B 66 ? THR A 31 ILE A 47 1 ? 17 HELX_P HELX_P3 3 TYR C 36 ? VAL C 46 ? TYR B 17 VAL B 27 1 ? 11 HELX_P HELX_P4 4 THR C 50 ? GLU C 65 ? THR B 31 GLU B 46 1 ? 16 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A DA 6 "O3'" ? ? ? 1_555 A 5IU 7 P ? ? F DA 17 F 5IU 18 1_555 ? ? ? ? ? ? ? 1.606 ? ? covale2 covale both ? A 5IU 7 "O3'" ? ? ? 1_555 A DA 8 P ? ? F 5IU 18 F DA 19 1_555 ? ? ? ? ? ? ? 1.612 ? ? covale3 covale both ? A DC 9 "O3'" ? ? ? 1_555 A 5IU 10 P ? ? F DC 20 F 5IU 21 1_555 ? ? ? ? ? ? ? 1.593 ? ? covale4 covale both ? A 5IU 10 "O3'" ? ? ? 1_555 A DA 11 P ? ? F 5IU 21 F DA 22 1_555 ? ? ? ? ? ? ? 1.606 ? ? hydrog1 hydrog ? ? A DA 1 N1 ? ? ? 1_555 A DT 20 N3 ? ? F DA 12 F DT 31 10_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DA 1 N6 ? ? ? 1_555 A DT 20 O4 ? ? F DA 12 F DT 31 10_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 2 N1 ? ? ? 1_555 A DC 19 N3 ? ? F DG 13 F DC 30 10_665 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? hydrog4 hydrog ? ? A DT 3 N3 ? ? ? 1_555 A DA 18 N1 ? ? F DT 14 F DA 29 10_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DT 3 O4 ? ? ? 1_555 A DA 18 N6 ? ? F DT 14 F DA 29 10_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DA 4 N1 ? ? ? 1_555 A DT 17 N3 ? ? F DA 15 F DT 28 10_665 ? ? ? ? ? ? 'DA-DT PAIR' ? ? ? hydrog7 hydrog ? ? A DT 5 N3 ? ? ? 1_555 A DA 16 N1 ? ? F DT 16 F DA 27 10_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DT 5 O4 ? ? ? 1_555 A DA 16 N6 ? ? F DT 16 F DA 27 10_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DA 6 N1 ? ? ? 1_555 A DT 15 N3 ? ? F DA 17 F DT 26 10_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DA 6 N6 ? ? ? 1_555 A DT 15 O4 ? ? F DA 17 F DT 26 10_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A 5IU 7 N3 ? ? ? 1_555 A DA 14 N1 ? ? F 5IU 18 F DA 25 10_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A 5IU 7 O4 ? ? ? 1_555 A DA 14 N6 ? ? F 5IU 18 F DA 25 10_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DA 8 N1 ? ? ? 1_555 A DT 13 N3 ? ? F DA 19 F DT 24 10_665 ? ? ? ? ? ? 'DA-DT PAIR' ? ? ? hydrog14 hydrog ? ? A DC 9 N3 ? ? ? 1_555 A DG 12 N1 ? ? F DC 20 F DG 23 10_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DC 9 N4 ? ? ? 1_555 A DG 12 O6 ? ? F DC 20 F DG 23 10_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DC 9 O2 ? ? ? 1_555 A DG 12 N2 ? ? F DC 20 F DG 23 10_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A 5IU 10 N3 ? ? ? 1_555 A DA 11 N1 ? ? F 5IU 21 F DA 22 10_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A 5IU 10 O4 ? ? ? 1_555 A DA 11 N6 ? ? F 5IU 21 F DA 22 10_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DA 11 N1 ? ? ? 1_555 A 5IU 10 N3 ? ? F DA 22 F 5IU 21 10_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DA 11 N6 ? ? ? 1_555 A 5IU 10 O4 ? ? F DA 22 F 5IU 21 10_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DG 12 N1 ? ? ? 1_555 A DC 9 N3 ? ? F DG 23 F DC 20 10_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DG 12 N2 ? ? ? 1_555 A DC 9 O2 ? ? F DG 23 F DC 20 10_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DG 12 O6 ? ? ? 1_555 A DC 9 N4 ? ? F DG 23 F DC 20 10_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DT 13 N3 ? ? ? 1_555 A DA 8 N1 ? ? F DT 24 F DA 19 10_665 ? ? ? ? ? ? 'DT-DA PAIR' ? ? ? hydrog25 hydrog ? ? A DA 14 N1 ? ? ? 1_555 A 5IU 7 N3 ? ? F DA 25 F 5IU 18 10_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DA 14 N6 ? ? ? 1_555 A 5IU 7 O4 ? ? F DA 25 F 5IU 18 10_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DT 15 N3 ? ? ? 1_555 A DA 6 N1 ? ? F DT 26 F DA 17 10_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DT 15 O4 ? ? ? 1_555 A DA 6 N6 ? ? F DT 26 F DA 17 10_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DA 16 N1 ? ? ? 1_555 A DT 5 N3 ? ? F DA 27 F DT 16 10_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DA 16 N6 ? ? ? 1_555 A DT 5 O4 ? ? F DA 27 F DT 16 10_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DT 17 N3 ? ? ? 1_555 A DA 4 N1 ? ? F DT 28 F DA 15 10_665 ? ? ? ? ? ? 'DT-DA PAIR' ? ? ? hydrog32 hydrog ? ? A DA 18 N1 ? ? ? 1_555 A DT 3 N3 ? ? F DA 29 F DT 14 10_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A DA 18 N6 ? ? ? 1_555 A DT 3 O4 ? ? F DA 29 F DT 14 10_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A DC 19 O2 ? ? ? 1_555 A DG 2 N2 ? ? F DC 30 F DG 13 10_665 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? hydrog35 hydrog ? ? A DT 20 N3 ? ? ? 1_555 A DA 1 N1 ? ? F DT 31 F DA 12 10_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A DT 20 O4 ? ? ? 1_555 A DA 1 N6 ? ? F DT 31 F DA 12 10_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id A _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLU B 24 ? LYS B 32 ? GLU A 5 LYS A 13 A 2 GLU C 24 ? LYS C 32 ? GLU B 5 LYS B 13 # _pdbx_struct_sheet_hbond.sheet_id A _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id HIS _pdbx_struct_sheet_hbond.range_1_label_asym_id B _pdbx_struct_sheet_hbond.range_1_label_seq_id 27 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id HIS _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 8 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id LEU _pdbx_struct_sheet_hbond.range_2_label_asym_id C _pdbx_struct_sheet_hbond.range_2_label_seq_id 29 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id LEU _pdbx_struct_sheet_hbond.range_2_auth_asym_id B _pdbx_struct_sheet_hbond.range_2_auth_seq_id 10 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id EPE _struct_site.pdbx_auth_seq_id 3022 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 1 _struct_site.details 'BINDING SITE FOR RESIDUE EPE A 3022' # _struct_site_gen.id 1 _struct_site_gen.site_id AC1 _struct_site_gen.pdbx_num_res 1 _struct_site_gen.label_comp_id PRO _struct_site_gen.label_asym_id B _struct_site_gen.label_seq_id 47 _struct_site_gen.pdbx_auth_ins_code ? _struct_site_gen.auth_comp_id PRO _struct_site_gen.auth_asym_id A _struct_site_gen.auth_seq_id 28 _struct_site_gen.label_atom_id . _struct_site_gen.label_alt_id ? _struct_site_gen.symmetry 1_555 _struct_site_gen.details ? # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O3S _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 EPE _pdbx_validate_symm_contact.auth_seq_id_1 3022 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O3S _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 EPE _pdbx_validate_symm_contact.auth_seq_id_2 3022 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 10_665 _pdbx_validate_symm_contact.dist 1.75 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PHE A 21 ? ? -38.20 -70.74 2 1 PHE A 23 ? ? -63.67 -73.32 3 1 ILE A 44 ? ? -31.18 -81.09 4 1 ILE A 47 ? ? -79.74 -99.60 5 1 LYS B 14 ? ? -35.12 -81.55 6 1 GLU B 46 ? ? -63.47 37.20 # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 1 _pdbx_validate_planes.auth_comp_id DT _pdbx_validate_planes.auth_asym_id F _pdbx_validate_planes.auth_seq_id 31 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.066 _pdbx_validate_planes.type 'SIDE CHAIN' # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A 5IU 7 F 5IU 18 ? DU "5-IODO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE" 2 A 5IU 10 F 5IU 21 ? DU "5-IODO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE" # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -18 ? B MET 1 2 1 Y 1 A GLY -17 ? B GLY 2 3 1 Y 1 A SER -16 ? B SER 3 4 1 Y 1 A SER -15 ? B SER 4 5 1 Y 1 A HIS -14 ? B HIS 5 6 1 Y 1 A HIS -13 ? B HIS 6 7 1 Y 1 A HIS -12 ? B HIS 7 8 1 Y 1 A HIS -11 ? B HIS 8 9 1 Y 1 A HIS -10 ? B HIS 9 10 1 Y 1 A HIS -9 ? B HIS 10 11 1 Y 1 A SER -8 ? B SER 11 12 1 Y 1 A SER -7 ? B SER 12 13 1 Y 1 A GLY -6 ? B GLY 13 14 1 Y 1 A LEU -5 ? B LEU 14 15 1 Y 1 A VAL -4 ? B VAL 15 16 1 Y 1 A PRO -3 ? B PRO 16 17 1 Y 1 A GLY -2 ? B GLY 17 18 1 Y 1 A SER -1 ? B SER 18 19 1 Y 1 A HIS 0 ? B HIS 19 20 1 Y 1 A MET 1 ? B MET 20 21 1 Y 1 A ASP 2 ? B ASP 21 22 1 Y 1 A LYS 3 ? B LYS 22 23 1 Y 1 A GLU 49 ? B GLU 68 24 1 Y 1 A ASN 50 ? B ASN 69 25 1 Y 1 A PRO 51 ? B PRO 70 26 1 Y 1 B MET -18 ? C MET 1 27 1 Y 1 B GLY -17 ? C GLY 2 28 1 Y 1 B SER -16 ? C SER 3 29 1 Y 1 B SER -15 ? C SER 4 30 1 Y 1 B HIS -14 ? C HIS 5 31 1 Y 1 B HIS -13 ? C HIS 6 32 1 Y 1 B HIS -12 ? C HIS 7 33 1 Y 1 B HIS -11 ? C HIS 8 34 1 Y 1 B HIS -10 ? C HIS 9 35 1 Y 1 B HIS -9 ? C HIS 10 36 1 Y 1 B SER -8 ? C SER 11 37 1 Y 1 B SER -7 ? C SER 12 38 1 Y 1 B GLY -6 ? C GLY 13 39 1 Y 1 B LEU -5 ? C LEU 14 40 1 Y 1 B VAL -4 ? C VAL 15 41 1 Y 1 B PRO -3 ? C PRO 16 42 1 Y 1 B GLY -2 ? C GLY 17 43 1 Y 1 B SER -1 ? C SER 18 44 1 Y 1 B HIS 0 ? C HIS 19 45 1 Y 1 B MET 1 ? C MET 20 46 1 Y 1 B ASP 2 ? C ASP 21 47 1 Y 1 B LYS 3 ? C LYS 22 48 1 Y 1 B GLY 48 ? C GLY 67 49 1 Y 1 B GLU 49 ? C GLU 68 50 1 Y 1 B ASN 50 ? C ASN 69 51 1 Y 1 B PRO 51 ? C PRO 70 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 5IU N1 N N N 1 5IU C2 C N N 2 5IU N3 N N N 3 5IU C4 C N N 4 5IU C5 C N N 5 5IU C6 C N N 6 5IU O2 O N N 7 5IU O4 O N N 8 5IU I5 I N N 9 5IU "C1'" C N R 10 5IU "C2'" C N N 11 5IU "C3'" C N S 12 5IU "C4'" C N R 13 5IU "O3'" O N N 14 5IU "O4'" O N N 15 5IU "C5'" C N N 16 5IU "O5'" O N N 17 5IU P P N N 18 5IU OP1 O N N 19 5IU OP2 O N N 20 5IU OP3 O N N 21 5IU HN3 H N N 22 5IU H6 H N N 23 5IU "H1'" H N N 24 5IU "H2'" H N N 25 5IU "H2''" H N N 26 5IU "H3'" H N N 27 5IU "H4'" H N N 28 5IU "HO3'" H N N 29 5IU "H5'" H N N 30 5IU "H5''" H N N 31 5IU HOP2 H N N 32 5IU HOP3 H N N 33 ALA N N N N 34 ALA CA C N S 35 ALA C C N N 36 ALA O O N N 37 ALA CB C N N 38 ALA OXT O N N 39 ALA H H N N 40 ALA H2 H N N 41 ALA HA H N N 42 ALA HB1 H N N 43 ALA HB2 H N N 44 ALA HB3 H N N 45 ALA HXT H N N 46 ARG N N N N 47 ARG CA C N S 48 ARG C C N N 49 ARG O O N N 50 ARG CB C N N 51 ARG CG C N N 52 ARG CD C N N 53 ARG NE N N N 54 ARG CZ C N N 55 ARG NH1 N N N 56 ARG NH2 N N N 57 ARG OXT O N N 58 ARG H H N N 59 ARG H2 H N N 60 ARG HA H N N 61 ARG HB2 H N N 62 ARG HB3 H N N 63 ARG HG2 H N N 64 ARG HG3 H N N 65 ARG HD2 H N N 66 ARG HD3 H N N 67 ARG HE H N N 68 ARG HH11 H N N 69 ARG HH12 H N N 70 ARG HH21 H N N 71 ARG HH22 H N N 72 ARG HXT H N N 73 ASN N N N N 74 ASN CA C N S 75 ASN C C N N 76 ASN O O N N 77 ASN CB C N N 78 ASN CG C N N 79 ASN OD1 O N N 80 ASN ND2 N N N 81 ASN OXT O N N 82 ASN H H N N 83 ASN H2 H N N 84 ASN HA H N N 85 ASN HB2 H N N 86 ASN HB3 H N N 87 ASN HD21 H N N 88 ASN HD22 H N N 89 ASN HXT H N N 90 ASP N N N N 91 ASP CA C N S 92 ASP C C N N 93 ASP O O N N 94 ASP CB C N N 95 ASP CG C N N 96 ASP OD1 O N N 97 ASP OD2 O N N 98 ASP OXT O N N 99 ASP H H N N 100 ASP H2 H N N 101 ASP HA H N N 102 ASP HB2 H N N 103 ASP HB3 H N N 104 ASP HD2 H N N 105 ASP HXT H N N 106 DA OP3 O N N 107 DA P P N N 108 DA OP1 O N N 109 DA OP2 O N N 110 DA "O5'" O N N 111 DA "C5'" C N N 112 DA "C4'" C N R 113 DA "O4'" O N N 114 DA "C3'" C N S 115 DA "O3'" O N N 116 DA "C2'" C N N 117 DA "C1'" C N R 118 DA N9 N Y N 119 DA C8 C Y N 120 DA N7 N Y N 121 DA C5 C Y N 122 DA C6 C Y N 123 DA N6 N N N 124 DA N1 N Y N 125 DA C2 C Y N 126 DA N3 N Y N 127 DA C4 C Y N 128 DA HOP3 H N N 129 DA HOP2 H N N 130 DA "H5'" H N N 131 DA "H5''" H N N 132 DA "H4'" H N N 133 DA "H3'" H N N 134 DA "HO3'" H N N 135 DA "H2'" H N N 136 DA "H2''" H N N 137 DA "H1'" H N N 138 DA H8 H N N 139 DA H61 H N N 140 DA H62 H N N 141 DA H2 H N N 142 DC OP3 O N N 143 DC P P N N 144 DC OP1 O N N 145 DC OP2 O N N 146 DC "O5'" O N N 147 DC "C5'" C N N 148 DC "C4'" C N R 149 DC "O4'" O N N 150 DC "C3'" C N S 151 DC "O3'" O N N 152 DC "C2'" C N N 153 DC "C1'" C N R 154 DC N1 N N N 155 DC C2 C N N 156 DC O2 O N N 157 DC N3 N N N 158 DC C4 C N N 159 DC N4 N N N 160 DC C5 C N N 161 DC C6 C N N 162 DC HOP3 H N N 163 DC HOP2 H N N 164 DC "H5'" H N N 165 DC "H5''" H N N 166 DC "H4'" H N N 167 DC "H3'" H N N 168 DC "HO3'" H N N 169 DC "H2'" H N N 170 DC "H2''" H N N 171 DC "H1'" H N N 172 DC H41 H N N 173 DC H42 H N N 174 DC H5 H N N 175 DC H6 H N N 176 DG OP3 O N N 177 DG P P N N 178 DG OP1 O N N 179 DG OP2 O N N 180 DG "O5'" O N N 181 DG "C5'" C N N 182 DG "C4'" C N R 183 DG "O4'" O N N 184 DG "C3'" C N S 185 DG "O3'" O N N 186 DG "C2'" C N N 187 DG "C1'" C N R 188 DG N9 N Y N 189 DG C8 C Y N 190 DG N7 N Y N 191 DG C5 C Y N 192 DG C6 C N N 193 DG O6 O N N 194 DG N1 N N N 195 DG C2 C N N 196 DG N2 N N N 197 DG N3 N N N 198 DG C4 C Y N 199 DG HOP3 H N N 200 DG HOP2 H N N 201 DG "H5'" H N N 202 DG "H5''" H N N 203 DG "H4'" H N N 204 DG "H3'" H N N 205 DG "HO3'" H N N 206 DG "H2'" H N N 207 DG "H2''" H N N 208 DG "H1'" H N N 209 DG H8 H N N 210 DG H1 H N N 211 DG H21 H N N 212 DG H22 H N N 213 DT OP3 O N N 214 DT P P N N 215 DT OP1 O N N 216 DT OP2 O N N 217 DT "O5'" O N N 218 DT "C5'" C N N 219 DT "C4'" C N R 220 DT "O4'" O N N 221 DT "C3'" C N S 222 DT "O3'" O N N 223 DT "C2'" C N N 224 DT "C1'" C N R 225 DT N1 N N N 226 DT C2 C N N 227 DT O2 O N N 228 DT N3 N N N 229 DT C4 C N N 230 DT O4 O N N 231 DT C5 C N N 232 DT C7 C N N 233 DT C6 C N N 234 DT HOP3 H N N 235 DT HOP2 H N N 236 DT "H5'" H N N 237 DT "H5''" H N N 238 DT "H4'" H N N 239 DT "H3'" H N N 240 DT "HO3'" H N N 241 DT "H2'" H N N 242 DT "H2''" H N N 243 DT "H1'" H N N 244 DT H3 H N N 245 DT H71 H N N 246 DT H72 H N N 247 DT H73 H N N 248 DT H6 H N N 249 EPE N1 N N N 250 EPE C2 C N N 251 EPE C3 C N N 252 EPE N4 N N N 253 EPE C5 C N N 254 EPE C6 C N N 255 EPE C7 C N N 256 EPE C8 C N N 257 EPE O8 O N N 258 EPE C9 C N N 259 EPE C10 C N N 260 EPE S S N N 261 EPE O1S O N N 262 EPE O2S O N N 263 EPE O3S O N N 264 EPE H21 H N N 265 EPE H22 H N N 266 EPE H31 H N N 267 EPE H32 H N N 268 EPE H51 H N N 269 EPE H52 H N N 270 EPE H61 H N N 271 EPE H62 H N N 272 EPE H71 H N N 273 EPE H72 H N N 274 EPE H81 H N N 275 EPE H82 H N N 276 EPE HO8 H N N 277 EPE H91 H N N 278 EPE H92 H N N 279 EPE H101 H N N 280 EPE H102 H N N 281 EPE HOS3 H N N 282 GLN N N N N 283 GLN CA C N S 284 GLN C C N N 285 GLN O O N N 286 GLN CB C N N 287 GLN CG C N N 288 GLN CD C N N 289 GLN OE1 O N N 290 GLN NE2 N N N 291 GLN OXT O N N 292 GLN H H N N 293 GLN H2 H N N 294 GLN HA H N N 295 GLN HB2 H N N 296 GLN HB3 H N N 297 GLN HG2 H N N 298 GLN HG3 H N N 299 GLN HE21 H N N 300 GLN HE22 H N N 301 GLN HXT H N N 302 GLU N N N N 303 GLU CA C N S 304 GLU C C N N 305 GLU O O N N 306 GLU CB C N N 307 GLU CG C N N 308 GLU CD C N N 309 GLU OE1 O N N 310 GLU OE2 O N N 311 GLU OXT O N N 312 GLU H H N N 313 GLU H2 H N N 314 GLU HA H N N 315 GLU HB2 H N N 316 GLU HB3 H N N 317 GLU HG2 H N N 318 GLU HG3 H N N 319 GLU HE2 H N N 320 GLU HXT H N N 321 GLY N N N N 322 GLY CA C N N 323 GLY C C N N 324 GLY O O N N 325 GLY OXT O N N 326 GLY H H N N 327 GLY H2 H N N 328 GLY HA2 H N N 329 GLY HA3 H N N 330 GLY HXT H N N 331 HIS N N N N 332 HIS CA C N S 333 HIS C C N N 334 HIS O O N N 335 HIS CB C N N 336 HIS CG C Y N 337 HIS ND1 N Y N 338 HIS CD2 C Y N 339 HIS CE1 C Y N 340 HIS NE2 N Y N 341 HIS OXT O N N 342 HIS H H N N 343 HIS H2 H N N 344 HIS HA H N N 345 HIS HB2 H N N 346 HIS HB3 H N N 347 HIS HD1 H N N 348 HIS HD2 H N N 349 HIS HE1 H N N 350 HIS HE2 H N N 351 HIS HXT H N N 352 ILE N N N N 353 ILE CA C N S 354 ILE C C N N 355 ILE O O N N 356 ILE CB C N S 357 ILE CG1 C N N 358 ILE CG2 C N N 359 ILE CD1 C N N 360 ILE OXT O N N 361 ILE H H N N 362 ILE H2 H N N 363 ILE HA H N N 364 ILE HB H N N 365 ILE HG12 H N N 366 ILE HG13 H N N 367 ILE HG21 H N N 368 ILE HG22 H N N 369 ILE HG23 H N N 370 ILE HD11 H N N 371 ILE HD12 H N N 372 ILE HD13 H N N 373 ILE HXT H N N 374 LEU N N N N 375 LEU CA C N S 376 LEU C C N N 377 LEU O O N N 378 LEU CB C N N 379 LEU CG C N N 380 LEU CD1 C N N 381 LEU CD2 C N N 382 LEU OXT O N N 383 LEU H H N N 384 LEU H2 H N N 385 LEU HA H N N 386 LEU HB2 H N N 387 LEU HB3 H N N 388 LEU HG H N N 389 LEU HD11 H N N 390 LEU HD12 H N N 391 LEU HD13 H N N 392 LEU HD21 H N N 393 LEU HD22 H N N 394 LEU HD23 H N N 395 LEU HXT H N N 396 LYS N N N N 397 LYS CA C N S 398 LYS C C N N 399 LYS O O N N 400 LYS CB C N N 401 LYS CG C N N 402 LYS CD C N N 403 LYS CE C N N 404 LYS NZ N N N 405 LYS OXT O N N 406 LYS H H N N 407 LYS H2 H N N 408 LYS HA H N N 409 LYS HB2 H N N 410 LYS HB3 H N N 411 LYS HG2 H N N 412 LYS HG3 H N N 413 LYS HD2 H N N 414 LYS HD3 H N N 415 LYS HE2 H N N 416 LYS HE3 H N N 417 LYS HZ1 H N N 418 LYS HZ2 H N N 419 LYS HZ3 H N N 420 LYS HXT H N N 421 MET N N N N 422 MET CA C N S 423 MET C C N N 424 MET O O N N 425 MET CB C N N 426 MET CG C N N 427 MET SD S N N 428 MET CE C N N 429 MET OXT O N N 430 MET H H N N 431 MET H2 H N N 432 MET HA H N N 433 MET HB2 H N N 434 MET HB3 H N N 435 MET HG2 H N N 436 MET HG3 H N N 437 MET HE1 H N N 438 MET HE2 H N N 439 MET HE3 H N N 440 MET HXT H N N 441 PHE N N N N 442 PHE CA C N S 443 PHE C C N N 444 PHE O O N N 445 PHE CB C N N 446 PHE CG C Y N 447 PHE CD1 C Y N 448 PHE CD2 C Y N 449 PHE CE1 C Y N 450 PHE CE2 C Y N 451 PHE CZ C Y N 452 PHE OXT O N N 453 PHE H H N N 454 PHE H2 H N N 455 PHE HA H N N 456 PHE HB2 H N N 457 PHE HB3 H N N 458 PHE HD1 H N N 459 PHE HD2 H N N 460 PHE HE1 H N N 461 PHE HE2 H N N 462 PHE HZ H N N 463 PHE HXT H N N 464 PRO N N N N 465 PRO CA C N S 466 PRO C C N N 467 PRO O O N N 468 PRO CB C N N 469 PRO CG C N N 470 PRO CD C N N 471 PRO OXT O N N 472 PRO H H N N 473 PRO HA H N N 474 PRO HB2 H N N 475 PRO HB3 H N N 476 PRO HG2 H N N 477 PRO HG3 H N N 478 PRO HD2 H N N 479 PRO HD3 H N N 480 PRO HXT H N N 481 SER N N N N 482 SER CA C N S 483 SER C C N N 484 SER O O N N 485 SER CB C N N 486 SER OG O N N 487 SER OXT O N N 488 SER H H N N 489 SER H2 H N N 490 SER HA H N N 491 SER HB2 H N N 492 SER HB3 H N N 493 SER HG H N N 494 SER HXT H N N 495 THR N N N N 496 THR CA C N S 497 THR C C N N 498 THR O O N N 499 THR CB C N R 500 THR OG1 O N N 501 THR CG2 C N N 502 THR OXT O N N 503 THR H H N N 504 THR H2 H N N 505 THR HA H N N 506 THR HB H N N 507 THR HG1 H N N 508 THR HG21 H N N 509 THR HG22 H N N 510 THR HG23 H N N 511 THR HXT H N N 512 TYR N N N N 513 TYR CA C N S 514 TYR C C N N 515 TYR O O N N 516 TYR CB C N N 517 TYR CG C Y N 518 TYR CD1 C Y N 519 TYR CD2 C Y N 520 TYR CE1 C Y N 521 TYR CE2 C Y N 522 TYR CZ C Y N 523 TYR OH O N N 524 TYR OXT O N N 525 TYR H H N N 526 TYR H2 H N N 527 TYR HA H N N 528 TYR HB2 H N N 529 TYR HB3 H N N 530 TYR HD1 H N N 531 TYR HD2 H N N 532 TYR HE1 H N N 533 TYR HE2 H N N 534 TYR HH H N N 535 TYR HXT H N N 536 VAL N N N N 537 VAL CA C N S 538 VAL C C N N 539 VAL O O N N 540 VAL CB C N N 541 VAL CG1 C N N 542 VAL CG2 C N N 543 VAL OXT O N N 544 VAL H H N N 545 VAL H2 H N N 546 VAL HA H N N 547 VAL HB H N N 548 VAL HG11 H N N 549 VAL HG12 H N N 550 VAL HG13 H N N 551 VAL HG21 H N N 552 VAL HG22 H N N 553 VAL HG23 H N N 554 VAL HXT H N N 555 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 5IU N1 C2 sing N N 1 5IU N1 C6 sing N N 2 5IU N1 "C1'" sing N N 3 5IU C2 N3 sing N N 4 5IU C2 O2 doub N N 5 5IU N3 C4 sing N N 6 5IU N3 HN3 sing N N 7 5IU C4 C5 sing N N 8 5IU C4 O4 doub N N 9 5IU C5 C6 doub N N 10 5IU C5 I5 sing N N 11 5IU C6 H6 sing N N 12 5IU "C1'" "C2'" sing N N 13 5IU "C1'" "O4'" sing N N 14 5IU "C1'" "H1'" sing N N 15 5IU "C2'" "C3'" sing N N 16 5IU "C2'" "H2'" sing N N 17 5IU "C2'" "H2''" sing N N 18 5IU "C3'" "C4'" sing N N 19 5IU "C3'" "O3'" sing N N 20 5IU "C3'" "H3'" sing N N 21 5IU "C4'" "O4'" sing N N 22 5IU "C4'" "C5'" sing N N 23 5IU "C4'" "H4'" sing N N 24 5IU "O3'" "HO3'" sing N N 25 5IU "C5'" "O5'" sing N N 26 5IU "C5'" "H5'" sing N N 27 5IU "C5'" "H5''" sing N N 28 5IU "O5'" P sing N N 29 5IU P OP1 doub N N 30 5IU P OP2 sing N N 31 5IU P OP3 sing N N 32 5IU OP2 HOP2 sing N N 33 5IU OP3 HOP3 sing N N 34 ALA N CA sing N N 35 ALA N H sing N N 36 ALA N H2 sing N N 37 ALA CA C sing N N 38 ALA CA CB sing N N 39 ALA CA HA sing N N 40 ALA C O doub N N 41 ALA C OXT sing N N 42 ALA CB HB1 sing N N 43 ALA CB HB2 sing N N 44 ALA CB HB3 sing N N 45 ALA OXT HXT sing N N 46 ARG N CA sing N N 47 ARG N H sing N N 48 ARG N H2 sing N N 49 ARG CA C sing N N 50 ARG CA CB sing N N 51 ARG CA HA sing N N 52 ARG C O doub N N 53 ARG C OXT sing N N 54 ARG CB CG sing N N 55 ARG CB HB2 sing N N 56 ARG CB HB3 sing N N 57 ARG CG CD sing N N 58 ARG CG HG2 sing N N 59 ARG CG HG3 sing N N 60 ARG CD NE sing N N 61 ARG CD HD2 sing N N 62 ARG CD HD3 sing N N 63 ARG NE CZ sing N N 64 ARG NE HE sing N N 65 ARG CZ NH1 sing N N 66 ARG CZ NH2 doub N N 67 ARG NH1 HH11 sing N N 68 ARG NH1 HH12 sing N N 69 ARG NH2 HH21 sing N N 70 ARG NH2 HH22 sing N N 71 ARG OXT HXT sing N N 72 ASN N CA sing N N 73 ASN N H sing N N 74 ASN N H2 sing N N 75 ASN CA C sing N N 76 ASN CA CB sing N N 77 ASN CA HA sing N N 78 ASN C O doub N N 79 ASN C OXT sing N N 80 ASN CB CG sing N N 81 ASN CB HB2 sing N N 82 ASN CB HB3 sing N N 83 ASN CG OD1 doub N N 84 ASN CG ND2 sing N N 85 ASN ND2 HD21 sing N N 86 ASN ND2 HD22 sing N N 87 ASN OXT HXT sing N N 88 ASP N CA sing N N 89 ASP N H sing N N 90 ASP N H2 sing N N 91 ASP CA C sing N N 92 ASP CA CB sing N N 93 ASP CA HA sing N N 94 ASP C O doub N N 95 ASP C OXT sing N N 96 ASP CB CG sing N N 97 ASP CB HB2 sing N N 98 ASP CB HB3 sing N N 99 ASP CG OD1 doub N N 100 ASP CG OD2 sing N N 101 ASP OD2 HD2 sing N N 102 ASP OXT HXT sing N N 103 DA OP3 P sing N N 104 DA OP3 HOP3 sing N N 105 DA P OP1 doub N N 106 DA P OP2 sing N N 107 DA P "O5'" sing N N 108 DA OP2 HOP2 sing N N 109 DA "O5'" "C5'" sing N N 110 DA "C5'" "C4'" sing N N 111 DA "C5'" "H5'" sing N N 112 DA "C5'" "H5''" sing N N 113 DA "C4'" "O4'" sing N N 114 DA "C4'" "C3'" sing N N 115 DA "C4'" "H4'" sing N N 116 DA "O4'" "C1'" sing N N 117 DA "C3'" "O3'" sing N N 118 DA "C3'" "C2'" sing N N 119 DA "C3'" "H3'" sing N N 120 DA "O3'" "HO3'" sing N N 121 DA "C2'" "C1'" sing N N 122 DA "C2'" "H2'" sing N N 123 DA "C2'" "H2''" sing N N 124 DA "C1'" N9 sing N N 125 DA "C1'" "H1'" sing N N 126 DA N9 C8 sing Y N 127 DA N9 C4 sing Y N 128 DA C8 N7 doub Y N 129 DA C8 H8 sing N N 130 DA N7 C5 sing Y N 131 DA C5 C6 sing Y N 132 DA C5 C4 doub Y N 133 DA C6 N6 sing N N 134 DA C6 N1 doub Y N 135 DA N6 H61 sing N N 136 DA N6 H62 sing N N 137 DA N1 C2 sing Y N 138 DA C2 N3 doub Y N 139 DA C2 H2 sing N N 140 DA N3 C4 sing Y N 141 DC OP3 P sing N N 142 DC OP3 HOP3 sing N N 143 DC P OP1 doub N N 144 DC P OP2 sing N N 145 DC P "O5'" sing N N 146 DC OP2 HOP2 sing N N 147 DC "O5'" "C5'" sing N N 148 DC "C5'" "C4'" sing N N 149 DC "C5'" "H5'" sing N N 150 DC "C5'" "H5''" sing N N 151 DC "C4'" "O4'" sing N N 152 DC "C4'" "C3'" sing N N 153 DC "C4'" "H4'" sing N N 154 DC "O4'" "C1'" sing N N 155 DC "C3'" "O3'" sing N N 156 DC "C3'" "C2'" sing N N 157 DC "C3'" "H3'" sing N N 158 DC "O3'" "HO3'" sing N N 159 DC "C2'" "C1'" sing N N 160 DC "C2'" "H2'" sing N N 161 DC "C2'" "H2''" sing N N 162 DC "C1'" N1 sing N N 163 DC "C1'" "H1'" sing N N 164 DC N1 C2 sing N N 165 DC N1 C6 sing N N 166 DC C2 O2 doub N N 167 DC C2 N3 sing N N 168 DC N3 C4 doub N N 169 DC C4 N4 sing N N 170 DC C4 C5 sing N N 171 DC N4 H41 sing N N 172 DC N4 H42 sing N N 173 DC C5 C6 doub N N 174 DC C5 H5 sing N N 175 DC C6 H6 sing N N 176 DG OP3 P sing N N 177 DG OP3 HOP3 sing N N 178 DG P OP1 doub N N 179 DG P OP2 sing N N 180 DG P "O5'" sing N N 181 DG OP2 HOP2 sing N N 182 DG "O5'" "C5'" sing N N 183 DG "C5'" "C4'" sing N N 184 DG "C5'" "H5'" sing N N 185 DG "C5'" "H5''" sing N N 186 DG "C4'" "O4'" sing N N 187 DG "C4'" "C3'" sing N N 188 DG "C4'" "H4'" sing N N 189 DG "O4'" "C1'" sing N N 190 DG "C3'" "O3'" sing N N 191 DG "C3'" "C2'" sing N N 192 DG "C3'" "H3'" sing N N 193 DG "O3'" "HO3'" sing N N 194 DG "C2'" "C1'" sing N N 195 DG "C2'" "H2'" sing N N 196 DG "C2'" "H2''" sing N N 197 DG "C1'" N9 sing N N 198 DG "C1'" "H1'" sing N N 199 DG N9 C8 sing Y N 200 DG N9 C4 sing Y N 201 DG C8 N7 doub Y N 202 DG C8 H8 sing N N 203 DG N7 C5 sing Y N 204 DG C5 C6 sing N N 205 DG C5 C4 doub Y N 206 DG C6 O6 doub N N 207 DG C6 N1 sing N N 208 DG N1 C2 sing N N 209 DG N1 H1 sing N N 210 DG C2 N2 sing N N 211 DG C2 N3 doub N N 212 DG N2 H21 sing N N 213 DG N2 H22 sing N N 214 DG N3 C4 sing N N 215 DT OP3 P sing N N 216 DT OP3 HOP3 sing N N 217 DT P OP1 doub N N 218 DT P OP2 sing N N 219 DT P "O5'" sing N N 220 DT OP2 HOP2 sing N N 221 DT "O5'" "C5'" sing N N 222 DT "C5'" "C4'" sing N N 223 DT "C5'" "H5'" sing N N 224 DT "C5'" "H5''" sing N N 225 DT "C4'" "O4'" sing N N 226 DT "C4'" "C3'" sing N N 227 DT "C4'" "H4'" sing N N 228 DT "O4'" "C1'" sing N N 229 DT "C3'" "O3'" sing N N 230 DT "C3'" "C2'" sing N N 231 DT "C3'" "H3'" sing N N 232 DT "O3'" "HO3'" sing N N 233 DT "C2'" "C1'" sing N N 234 DT "C2'" "H2'" sing N N 235 DT "C2'" "H2''" sing N N 236 DT "C1'" N1 sing N N 237 DT "C1'" "H1'" sing N N 238 DT N1 C2 sing N N 239 DT N1 C6 sing N N 240 DT C2 O2 doub N N 241 DT C2 N3 sing N N 242 DT N3 C4 sing N N 243 DT N3 H3 sing N N 244 DT C4 O4 doub N N 245 DT C4 C5 sing N N 246 DT C5 C7 sing N N 247 DT C5 C6 doub N N 248 DT C7 H71 sing N N 249 DT C7 H72 sing N N 250 DT C7 H73 sing N N 251 DT C6 H6 sing N N 252 EPE N1 C2 sing N N 253 EPE N1 C6 sing N N 254 EPE N1 C9 sing N N 255 EPE C2 C3 sing N N 256 EPE C2 H21 sing N N 257 EPE C2 H22 sing N N 258 EPE C3 N4 sing N N 259 EPE C3 H31 sing N N 260 EPE C3 H32 sing N N 261 EPE N4 C5 sing N N 262 EPE N4 C7 sing N N 263 EPE C5 C6 sing N N 264 EPE C5 H51 sing N N 265 EPE C5 H52 sing N N 266 EPE C6 H61 sing N N 267 EPE C6 H62 sing N N 268 EPE C7 C8 sing N N 269 EPE C7 H71 sing N N 270 EPE C7 H72 sing N N 271 EPE C8 O8 sing N N 272 EPE C8 H81 sing N N 273 EPE C8 H82 sing N N 274 EPE O8 HO8 sing N N 275 EPE C9 C10 sing N N 276 EPE C9 H91 sing N N 277 EPE C9 H92 sing N N 278 EPE C10 S sing N N 279 EPE C10 H101 sing N N 280 EPE C10 H102 sing N N 281 EPE S O1S doub N N 282 EPE S O2S doub N N 283 EPE S O3S sing N N 284 EPE O3S HOS3 sing N N 285 GLN N CA sing N N 286 GLN N H sing N N 287 GLN N H2 sing N N 288 GLN CA C sing N N 289 GLN CA CB sing N N 290 GLN CA HA sing N N 291 GLN C O doub N N 292 GLN C OXT sing N N 293 GLN CB CG sing N N 294 GLN CB HB2 sing N N 295 GLN CB HB3 sing N N 296 GLN CG CD sing N N 297 GLN CG HG2 sing N N 298 GLN CG HG3 sing N N 299 GLN CD OE1 doub N N 300 GLN CD NE2 sing N N 301 GLN NE2 HE21 sing N N 302 GLN NE2 HE22 sing N N 303 GLN OXT HXT sing N N 304 GLU N CA sing N N 305 GLU N H sing N N 306 GLU N H2 sing N N 307 GLU CA C sing N N 308 GLU CA CB sing N N 309 GLU CA HA sing N N 310 GLU C O doub N N 311 GLU C OXT sing N N 312 GLU CB CG sing N N 313 GLU CB HB2 sing N N 314 GLU CB HB3 sing N N 315 GLU CG CD sing N N 316 GLU CG HG2 sing N N 317 GLU CG HG3 sing N N 318 GLU CD OE1 doub N N 319 GLU CD OE2 sing N N 320 GLU OE2 HE2 sing N N 321 GLU OXT HXT sing N N 322 GLY N CA sing N N 323 GLY N H sing N N 324 GLY N H2 sing N N 325 GLY CA C sing N N 326 GLY CA HA2 sing N N 327 GLY CA HA3 sing N N 328 GLY C O doub N N 329 GLY C OXT sing N N 330 GLY OXT HXT sing N N 331 HIS N CA sing N N 332 HIS N H sing N N 333 HIS N H2 sing N N 334 HIS CA C sing N N 335 HIS CA CB sing N N 336 HIS CA HA sing N N 337 HIS C O doub N N 338 HIS C OXT sing N N 339 HIS CB CG sing N N 340 HIS CB HB2 sing N N 341 HIS CB HB3 sing N N 342 HIS CG ND1 sing Y N 343 HIS CG CD2 doub Y N 344 HIS ND1 CE1 doub Y N 345 HIS ND1 HD1 sing N N 346 HIS CD2 NE2 sing Y N 347 HIS CD2 HD2 sing N N 348 HIS CE1 NE2 sing Y N 349 HIS CE1 HE1 sing N N 350 HIS NE2 HE2 sing N N 351 HIS OXT HXT sing N N 352 ILE N CA sing N N 353 ILE N H sing N N 354 ILE N H2 sing N N 355 ILE CA C sing N N 356 ILE CA CB sing N N 357 ILE CA HA sing N N 358 ILE C O doub N N 359 ILE C OXT sing N N 360 ILE CB CG1 sing N N 361 ILE CB CG2 sing N N 362 ILE CB HB sing N N 363 ILE CG1 CD1 sing N N 364 ILE CG1 HG12 sing N N 365 ILE CG1 HG13 sing N N 366 ILE CG2 HG21 sing N N 367 ILE CG2 HG22 sing N N 368 ILE CG2 HG23 sing N N 369 ILE CD1 HD11 sing N N 370 ILE CD1 HD12 sing N N 371 ILE CD1 HD13 sing N N 372 ILE OXT HXT sing N N 373 LEU N CA sing N N 374 LEU N H sing N N 375 LEU N H2 sing N N 376 LEU CA C sing N N 377 LEU CA CB sing N N 378 LEU CA HA sing N N 379 LEU C O doub N N 380 LEU C OXT sing N N 381 LEU CB CG sing N N 382 LEU CB HB2 sing N N 383 LEU CB HB3 sing N N 384 LEU CG CD1 sing N N 385 LEU CG CD2 sing N N 386 LEU CG HG sing N N 387 LEU CD1 HD11 sing N N 388 LEU CD1 HD12 sing N N 389 LEU CD1 HD13 sing N N 390 LEU CD2 HD21 sing N N 391 LEU CD2 HD22 sing N N 392 LEU CD2 HD23 sing N N 393 LEU OXT HXT sing N N 394 LYS N CA sing N N 395 LYS N H sing N N 396 LYS N H2 sing N N 397 LYS CA C sing N N 398 LYS CA CB sing N N 399 LYS CA HA sing N N 400 LYS C O doub N N 401 LYS C OXT sing N N 402 LYS CB CG sing N N 403 LYS CB HB2 sing N N 404 LYS CB HB3 sing N N 405 LYS CG CD sing N N 406 LYS CG HG2 sing N N 407 LYS CG HG3 sing N N 408 LYS CD CE sing N N 409 LYS CD HD2 sing N N 410 LYS CD HD3 sing N N 411 LYS CE NZ sing N N 412 LYS CE HE2 sing N N 413 LYS CE HE3 sing N N 414 LYS NZ HZ1 sing N N 415 LYS NZ HZ2 sing N N 416 LYS NZ HZ3 sing N N 417 LYS OXT HXT sing N N 418 MET N CA sing N N 419 MET N H sing N N 420 MET N H2 sing N N 421 MET CA C sing N N 422 MET CA CB sing N N 423 MET CA HA sing N N 424 MET C O doub N N 425 MET C OXT sing N N 426 MET CB CG sing N N 427 MET CB HB2 sing N N 428 MET CB HB3 sing N N 429 MET CG SD sing N N 430 MET CG HG2 sing N N 431 MET CG HG3 sing N N 432 MET SD CE sing N N 433 MET CE HE1 sing N N 434 MET CE HE2 sing N N 435 MET CE HE3 sing N N 436 MET OXT HXT sing N N 437 PHE N CA sing N N 438 PHE N H sing N N 439 PHE N H2 sing N N 440 PHE CA C sing N N 441 PHE CA CB sing N N 442 PHE CA HA sing N N 443 PHE C O doub N N 444 PHE C OXT sing N N 445 PHE CB CG sing N N 446 PHE CB HB2 sing N N 447 PHE CB HB3 sing N N 448 PHE CG CD1 doub Y N 449 PHE CG CD2 sing Y N 450 PHE CD1 CE1 sing Y N 451 PHE CD1 HD1 sing N N 452 PHE CD2 CE2 doub Y N 453 PHE CD2 HD2 sing N N 454 PHE CE1 CZ doub Y N 455 PHE CE1 HE1 sing N N 456 PHE CE2 CZ sing Y N 457 PHE CE2 HE2 sing N N 458 PHE CZ HZ sing N N 459 PHE OXT HXT sing N N 460 PRO N CA sing N N 461 PRO N CD sing N N 462 PRO N H sing N N 463 PRO CA C sing N N 464 PRO CA CB sing N N 465 PRO CA HA sing N N 466 PRO C O doub N N 467 PRO C OXT sing N N 468 PRO CB CG sing N N 469 PRO CB HB2 sing N N 470 PRO CB HB3 sing N N 471 PRO CG CD sing N N 472 PRO CG HG2 sing N N 473 PRO CG HG3 sing N N 474 PRO CD HD2 sing N N 475 PRO CD HD3 sing N N 476 PRO OXT HXT sing N N 477 SER N CA sing N N 478 SER N H sing N N 479 SER N H2 sing N N 480 SER CA C sing N N 481 SER CA CB sing N N 482 SER CA HA sing N N 483 SER C O doub N N 484 SER C OXT sing N N 485 SER CB OG sing N N 486 SER CB HB2 sing N N 487 SER CB HB3 sing N N 488 SER OG HG sing N N 489 SER OXT HXT sing N N 490 THR N CA sing N N 491 THR N H sing N N 492 THR N H2 sing N N 493 THR CA C sing N N 494 THR CA CB sing N N 495 THR CA HA sing N N 496 THR C O doub N N 497 THR C OXT sing N N 498 THR CB OG1 sing N N 499 THR CB CG2 sing N N 500 THR CB HB sing N N 501 THR OG1 HG1 sing N N 502 THR CG2 HG21 sing N N 503 THR CG2 HG22 sing N N 504 THR CG2 HG23 sing N N 505 THR OXT HXT sing N N 506 TYR N CA sing N N 507 TYR N H sing N N 508 TYR N H2 sing N N 509 TYR CA C sing N N 510 TYR CA CB sing N N 511 TYR CA HA sing N N 512 TYR C O doub N N 513 TYR C OXT sing N N 514 TYR CB CG sing N N 515 TYR CB HB2 sing N N 516 TYR CB HB3 sing N N 517 TYR CG CD1 doub Y N 518 TYR CG CD2 sing Y N 519 TYR CD1 CE1 sing Y N 520 TYR CD1 HD1 sing N N 521 TYR CD2 CE2 doub Y N 522 TYR CD2 HD2 sing N N 523 TYR CE1 CZ doub Y N 524 TYR CE1 HE1 sing N N 525 TYR CE2 CZ sing Y N 526 TYR CE2 HE2 sing N N 527 TYR CZ OH sing N N 528 TYR OH HH sing N N 529 TYR OXT HXT sing N N 530 VAL N CA sing N N 531 VAL N H sing N N 532 VAL N H2 sing N N 533 VAL CA C sing N N 534 VAL CA CB sing N N 535 VAL CA HA sing N N 536 VAL C O doub N N 537 VAL C OXT sing N N 538 VAL CB CG1 sing N N 539 VAL CB CG2 sing N N 540 VAL CB HB sing N N 541 VAL CG1 HG11 sing N N 542 VAL CG1 HG12 sing N N 543 VAL CG1 HG13 sing N N 544 VAL CG2 HG21 sing N N 545 VAL CG2 HG22 sing N N 546 VAL CG2 HG23 sing N N 547 VAL OXT HXT sing N N 548 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 2Q2K 'double helix' 2Q2K 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DA 1 1_555 A DT 20 10_665 -0.128 -0.247 -0.198 -0.440 -8.944 0.846 1 F_DA12:DT31_F F 12 ? F 31 ? 20 1 1 A DG 2 1_555 A DC 19 10_665 -0.281 0.318 -0.065 -6.818 -14.174 4.887 2 F_DG13:DC30_F F 13 ? F 30 ? ? 1 1 A DT 3 1_555 A DA 18 10_665 -0.295 -0.009 0.575 -14.481 -7.142 11.197 3 F_DT14:DA29_F F 14 ? F 29 ? 20 1 1 A DA 4 1_555 A DT 17 10_665 -0.359 0.260 -0.635 -4.640 -3.850 8.935 4 F_DA15:DT28_F F 15 ? F 28 ? ? ? 1 A DT 5 1_555 A DA 16 10_665 -0.088 -0.405 -0.769 15.016 1.704 -1.340 5 F_DT16:DA27_F F 16 ? F 27 ? 20 1 1 A DA 6 1_555 A DT 15 10_665 0.345 -0.498 -1.256 -22.545 -3.163 1.874 6 F_DA17:DT26_F F 17 ? F 26 ? 20 1 1 A 5IU 7 1_555 A DA 14 10_665 0.959 0.095 -0.562 5.878 4.530 2.865 7 F_5IU18:DA25_F F 18 ? F 25 ? 20 1 1 A DA 8 1_555 A DT 13 10_665 0.334 0.484 -0.177 -0.061 -13.612 15.846 8 F_DA19:DT24_F F 19 ? F 24 ? ? ? 1 A DC 9 1_555 A DG 12 10_665 -0.976 0.138 0.286 0.784 -10.551 3.785 9 F_DC20:DG23_F F 20 ? F 23 ? 19 1 1 A 5IU 10 1_555 A DA 11 10_665 1.034 -0.355 0.474 10.386 -13.185 -3.598 10 F_5IU21:DA22_F F 21 ? F 22 ? 20 1 1 A DA 11 1_555 A 5IU 10 10_665 -1.034 -0.355 0.474 -10.386 -13.185 -3.598 11 F_DA22:5IU21_F F 22 ? F 21 ? 20 1 1 A DG 12 1_555 A DC 9 10_665 0.976 0.138 0.286 -0.784 -10.551 3.785 12 F_DG23:DC20_F F 23 ? F 20 ? 19 1 1 A DT 13 1_555 A DA 8 10_665 -0.334 0.484 -0.177 0.061 -13.612 15.846 13 F_DT24:DA19_F F 24 ? F 19 ? ? ? 1 A DA 14 1_555 A 5IU 7 10_665 -0.959 0.095 -0.562 -5.878 4.530 2.865 14 F_DA25:5IU18_F F 25 ? F 18 ? 20 1 1 A DT 15 1_555 A DA 6 10_665 -0.345 -0.498 -1.256 22.545 -3.163 1.874 15 F_DT26:DA17_F F 26 ? F 17 ? 20 1 1 A DA 16 1_555 A DT 5 10_665 0.088 -0.405 -0.769 -15.016 1.704 -1.340 16 F_DA27:DT16_F F 27 ? F 16 ? 20 1 1 A DT 17 1_555 A DA 4 10_665 0.359 0.260 -0.635 4.640 -3.850 8.935 17 F_DT28:DA15_F F 28 ? F 15 ? ? ? 1 A DA 18 1_555 A DT 3 10_665 0.295 -0.009 0.575 14.481 -7.142 11.197 18 F_DA29:DT14_F F 29 ? F 14 ? 20 1 1 A DC 19 1_555 A DG 2 10_665 0.281 0.318 -0.065 6.818 -14.174 4.887 19 F_DC30:DG13_F F 30 ? F 13 ? ? 1 1 A DT 20 1_555 A DA 1 10_665 0.128 -0.247 -0.198 0.440 -8.944 0.846 20 F_DT31:DA12_F F 31 ? F 12 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DA 1 1_555 A DT 20 10_665 A DG 2 1_555 A DC 19 10_665 0.237 -0.364 3.463 -3.763 2.654 35.999 -0.976 -0.934 3.387 4.273 6.057 36.283 1 FF_DA12DG13:DC30DT31_FF F 12 ? F 31 ? F 13 ? F 30 ? 1 A DG 2 1_555 A DC 19 10_665 A DT 3 1_555 A DA 18 10_665 1.122 -0.489 3.386 -2.498 -1.843 33.683 -0.535 -2.343 3.318 -3.173 4.299 33.822 2 FF_DG13DT14:DA29DC30_FF F 13 ? F 30 ? F 14 ? F 29 ? 1 A DT 3 1_555 A DA 18 10_665 A DA 4 1_555 A DT 17 10_665 -0.541 -0.340 2.971 6.001 8.399 32.913 -1.728 1.738 2.670 14.390 -10.281 34.451 3 FF_DT14DA15:DT28DA29_FF F 14 ? F 29 ? F 15 ? F 28 ? 1 A DA 4 1_555 A DT 17 10_665 A DT 5 1_555 A DA 16 10_665 0.321 -0.266 2.925 0.889 0.317 29.603 -0.580 -0.460 2.930 0.621 -1.740 29.618 4 FF_DA15DT16:DA27DT28_FF F 15 ? F 28 ? F 16 ? F 27 ? 1 A DT 5 1_555 A DA 16 10_665 A DA 6 1_555 A DT 15 10_665 -0.161 -0.557 4.331 1.289 16.918 34.336 -3.612 0.457 3.664 26.731 -2.036 38.186 5 FF_DT16DA17:DT26DA27_FF F 16 ? F 27 ? F 17 ? F 26 ? 1 A DA 6 1_555 A DT 15 10_665 A 5IU 7 1_555 A DA 14 10_665 -0.335 -0.379 2.777 -6.411 -0.918 28.577 -0.578 -0.534 2.795 -1.830 12.781 29.286 6 FF_DA175IU18:DA25DT26_FF F 17 ? F 26 ? F 18 ? F 25 ? 1 A 5IU 7 1_555 A DA 14 10_665 A DA 8 1_555 A DT 13 10_665 0.099 -0.360 3.462 1.534 14.823 25.589 -3.964 0.142 2.834 30.402 -3.146 29.549 7 FF_5IU18DA19:DT24DA25_FF F 18 ? F 25 ? F 19 ? F 24 ? 1 A DA 8 1_555 A DT 13 10_665 A DC 9 1_555 A DG 12 10_665 -1.374 -0.567 3.154 -3.594 4.982 28.703 -2.167 1.958 3.157 9.906 7.147 29.339 8 FF_DA19DC20:DG23DT24_FF F 19 ? F 24 ? F 20 ? F 23 ? 1 A DC 9 1_555 A DG 12 10_665 A 5IU 10 1_555 A DA 11 10_665 0.119 0.428 3.055 1.434 4.028 42.514 0.207 -0.028 3.083 5.539 -1.972 42.718 9 FF_DC205IU21:DA22DG23_FF F 20 ? F 23 ? F 21 ? F 22 ? 1 A 5IU 10 1_555 A DA 11 10_665 A DA 11 1_555 A 5IU 10 10_665 0.000 2.388 4.074 0.000 -19.474 44.621 4.579 0.000 2.857 -24.324 0.000 48.486 10 FF_5IU21DA22:5IU21DA22_FF F 21 ? F 22 ? F 22 ? F 21 ? 1 A DA 11 1_555 A 5IU 10 10_665 A DG 12 1_555 A DC 9 10_665 -0.119 0.428 3.055 -1.434 4.029 42.514 0.207 0.028 3.083 5.539 1.972 42.718 11 FF_DA22DG23:DC205IU21_FF F 22 ? F 21 ? F 23 ? F 20 ? 1 A DG 12 1_555 A DC 9 10_665 A DT 13 1_555 A DA 8 10_665 1.374 -0.567 3.154 3.594 4.982 28.703 -2.167 -1.958 3.157 9.906 -7.147 29.339 12 FF_DG23DT24:DA19DC20_FF F 23 ? F 20 ? F 24 ? F 19 ? 1 A DT 13 1_555 A DA 8 10_665 A DA 14 1_555 A 5IU 7 10_665 -0.099 -0.360 3.462 -1.534 14.823 25.589 -3.964 -0.142 2.834 30.402 3.146 29.549 13 FF_DT24DA25:5IU18DA19_FF F 24 ? F 19 ? F 25 ? F 18 ? 1 A DA 14 1_555 A 5IU 7 10_665 A DT 15 1_555 A DA 6 10_665 0.335 -0.379 2.777 6.411 -0.918 28.577 -0.578 0.534 2.795 -1.830 -12.781 29.286 14 FF_DA25DT26:DA175IU18_FF F 25 ? F 18 ? F 26 ? F 17 ? 1 A DT 15 1_555 A DA 6 10_665 A DA 16 1_555 A DT 5 10_665 0.161 -0.557 4.331 -1.289 16.918 34.336 -3.612 -0.457 3.664 26.731 2.036 38.186 15 FF_DT26DA27:DT16DA17_FF F 26 ? F 17 ? F 27 ? F 16 ? 1 A DA 16 1_555 A DT 5 10_665 A DT 17 1_555 A DA 4 10_665 -0.321 -0.266 2.925 -0.889 0.317 29.603 -0.580 0.460 2.930 0.621 1.740 29.618 16 FF_DA27DT28:DA15DT16_FF F 27 ? F 16 ? F 28 ? F 15 ? 1 A DT 17 1_555 A DA 4 10_665 A DA 18 1_555 A DT 3 10_665 0.541 -0.340 2.971 -6.001 8.399 32.913 -1.728 -1.738 2.670 14.390 10.281 34.451 17 FF_DT28DA29:DT14DA15_FF F 28 ? F 15 ? F 29 ? F 14 ? 1 A DA 18 1_555 A DT 3 10_665 A DC 19 1_555 A DG 2 10_665 -1.122 -0.489 3.386 2.498 -1.843 33.683 -0.535 2.343 3.318 -3.173 -4.299 33.822 18 FF_DA29DC30:DG13DT14_FF F 29 ? F 14 ? F 30 ? F 13 ? 1 A DC 19 1_555 A DG 2 10_665 A DT 20 1_555 A DA 1 10_665 -0.237 -0.364 3.463 3.763 2.654 35.999 -0.976 0.934 3.387 4.273 -6.058 36.283 19 FF_DC30DT31:DA12DG13_FF F 30 ? F 13 ? F 31 ? F 12 ? # _atom_sites.entry_id 2Q2K _atom_sites.fract_transf_matrix[1][1] 0.017762 _atom_sites.fract_transf_matrix[1][2] 0.010255 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020510 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.004301 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C I N O P S # loop_