data_2Q3H # _entry.id 2Q3H # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.389 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2Q3H pdb_00002q3h 10.2210/pdb2q3h/pdb RCSB RCSB043101 ? ? WWPDB D_1000043101 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-06-19 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-04-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Derived calculations' 7 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model 5 4 'Structure model' pdbx_struct_conn_angle 6 4 'Structure model' struct_conn 7 4 'Structure model' struct_ref_seq_dif 8 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.value' 16 4 'Structure model' '_struct_conn.pdbx_dist_value' 17 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 18 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 19 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 20 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 21 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 22 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 23 4 'Structure model' '_struct_ref_seq_dif.details' 24 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 25 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 26 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2Q3H _pdbx_database_status.recvd_initial_deposition_date 2007-05-30 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 2Q3H _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Gileadi, C.' 1 'Yang, X.' 2 'Papagrigoriou, E.' 3 'Elkins, J.' 4 'Zhao, Y.' 5 'Bray, J.' 6 'Gileadi, O.' 7 'Umeano, C.' 8 'Ugochukwu, E.' 9 'Uppenberg, J.' 10 'Bunkoczi, G.' 11 'von Delft, F.' 12 'Pike, A.C.W.' 13 'Phillips, C.' 14 'Savitsky, P.' 15 'Fedorov, O.' 16 'Edwards, A.' 17 'Weigelt, J.' 18 'Arrowsmith, C.H.' 19 'Sundstrom, M.' 20 'Doyle, D.A.' 21 'Structural Genomics Consortium (SGC)' 22 # _citation.id primary _citation.title 'The crystal structure of RhouA in the GDP-bound state.' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Gileadi, C.' 1 ? primary 'Yang, X.' 2 ? primary 'Papagrigoriou, E.' 3 ? primary 'Elkins, J.' 4 ? primary 'Zhao, Y.' 5 ? primary 'Bray, J.' 6 ? primary 'Gileadi, O.' 7 ? primary 'Umeano, C.' 8 ? primary 'Ugochukwu, E.' 9 ? primary 'Uppenberg, J.' 10 ? primary 'Bunkoczi, G.' 11 ? primary 'von Delft, F.' 12 ? primary 'Pike, A.C.W.' 13 ? primary 'Phillips, C.' 14 ? primary 'Savitsky, P.' 15 ? primary 'Fedorov, O.' 16 ? primary 'Edwards, A.' 17 ? primary 'Weigelt, J.' 18 ? primary 'Arrowsmith, C.H.' 19 ? primary 'Sundstrom, M.' 20 ? primary 'Doyle, D.A.' 21 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Ras homolog gene family, member U' 21686.646 1 ? ? ? ? 2 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 3 non-polymer syn "GUANOSINE-5'-DIPHOSPHATE" 443.201 1 ? ? ? ? 4 water nat water 18.015 124 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Ras-like gene family member U, Wrch-1, Ryu GTPase, CDC42-like GTPase, Rho GTPase-like protein ARHU, GTP-binding protein like 1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SMGPGEPGGRGRAGGAEGRGVKCVLVGDGAVGKTSLVVSYTTNGYPTEYIPTAFDNFSAVVSVDGRPVRLQLCDTAGQDE FDKLRPLCYTNTDIFLLCFSVVSPSSFQNVSEKWVPEIRCHCPKAPIILVGTQSDLREDVKVLIELDKCKEKPVPEEAAK LLAEEIKAASYIECSALTQKNLKEVFDAAIVAGIQYSDTQQ ; _entity_poly.pdbx_seq_one_letter_code_can ;SMGPGEPGGRGRAGGAEGRGVKCVLVGDGAVGKTSLVVSYTTNGYPTEYIPTAFDNFSAVVSVDGRPVRLQLCDTAGQDE FDKLRPLCYTNTDIFLLCFSVVSPSSFQNVSEKWVPEIRCHCPKAPIILVGTQSDLREDVKVLIELDKCKEKPVPEEAAK LLAEEIKAASYIECSALTQKNLKEVFDAAIVAGIQYSDTQQ ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 "GUANOSINE-5'-DIPHOSPHATE" GDP 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 MET n 1 3 GLY n 1 4 PRO n 1 5 GLY n 1 6 GLU n 1 7 PRO n 1 8 GLY n 1 9 GLY n 1 10 ARG n 1 11 GLY n 1 12 ARG n 1 13 ALA n 1 14 GLY n 1 15 GLY n 1 16 ALA n 1 17 GLU n 1 18 GLY n 1 19 ARG n 1 20 GLY n 1 21 VAL n 1 22 LYS n 1 23 CYS n 1 24 VAL n 1 25 LEU n 1 26 VAL n 1 27 GLY n 1 28 ASP n 1 29 GLY n 1 30 ALA n 1 31 VAL n 1 32 GLY n 1 33 LYS n 1 34 THR n 1 35 SER n 1 36 LEU n 1 37 VAL n 1 38 VAL n 1 39 SER n 1 40 TYR n 1 41 THR n 1 42 THR n 1 43 ASN n 1 44 GLY n 1 45 TYR n 1 46 PRO n 1 47 THR n 1 48 GLU n 1 49 TYR n 1 50 ILE n 1 51 PRO n 1 52 THR n 1 53 ALA n 1 54 PHE n 1 55 ASP n 1 56 ASN n 1 57 PHE n 1 58 SER n 1 59 ALA n 1 60 VAL n 1 61 VAL n 1 62 SER n 1 63 VAL n 1 64 ASP n 1 65 GLY n 1 66 ARG n 1 67 PRO n 1 68 VAL n 1 69 ARG n 1 70 LEU n 1 71 GLN n 1 72 LEU n 1 73 CYS n 1 74 ASP n 1 75 THR n 1 76 ALA n 1 77 GLY n 1 78 GLN n 1 79 ASP n 1 80 GLU n 1 81 PHE n 1 82 ASP n 1 83 LYS n 1 84 LEU n 1 85 ARG n 1 86 PRO n 1 87 LEU n 1 88 CYS n 1 89 TYR n 1 90 THR n 1 91 ASN n 1 92 THR n 1 93 ASP n 1 94 ILE n 1 95 PHE n 1 96 LEU n 1 97 LEU n 1 98 CYS n 1 99 PHE n 1 100 SER n 1 101 VAL n 1 102 VAL n 1 103 SER n 1 104 PRO n 1 105 SER n 1 106 SER n 1 107 PHE n 1 108 GLN n 1 109 ASN n 1 110 VAL n 1 111 SER n 1 112 GLU n 1 113 LYS n 1 114 TRP n 1 115 VAL n 1 116 PRO n 1 117 GLU n 1 118 ILE n 1 119 ARG n 1 120 CYS n 1 121 HIS n 1 122 CYS n 1 123 PRO n 1 124 LYS n 1 125 ALA n 1 126 PRO n 1 127 ILE n 1 128 ILE n 1 129 LEU n 1 130 VAL n 1 131 GLY n 1 132 THR n 1 133 GLN n 1 134 SER n 1 135 ASP n 1 136 LEU n 1 137 ARG n 1 138 GLU n 1 139 ASP n 1 140 VAL n 1 141 LYS n 1 142 VAL n 1 143 LEU n 1 144 ILE n 1 145 GLU n 1 146 LEU n 1 147 ASP n 1 148 LYS n 1 149 CYS n 1 150 LYS n 1 151 GLU n 1 152 LYS n 1 153 PRO n 1 154 VAL n 1 155 PRO n 1 156 GLU n 1 157 GLU n 1 158 ALA n 1 159 ALA n 1 160 LYS n 1 161 LEU n 1 162 LEU n 1 163 ALA n 1 164 GLU n 1 165 GLU n 1 166 ILE n 1 167 LYS n 1 168 ALA n 1 169 ALA n 1 170 SER n 1 171 TYR n 1 172 ILE n 1 173 GLU n 1 174 CYS n 1 175 SER n 1 176 ALA n 1 177 LEU n 1 178 THR n 1 179 GLN n 1 180 LYS n 1 181 ASN n 1 182 LEU n 1 183 LYS n 1 184 GLU n 1 185 VAL n 1 186 PHE n 1 187 ASP n 1 188 ALA n 1 189 ALA n 1 190 ILE n 1 191 VAL n 1 192 ALA n 1 193 GLY n 1 194 ILE n 1 195 GLN n 1 196 TYR n 1 197 SER n 1 198 ASP n 1 199 THR n 1 200 GLN n 1 201 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene RHOU _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3) with with pRARE plasmid encoding rare codon tRNAs,(chloramphenicol-resistant)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pNIC28-Bsa4 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GDP 'RNA linking' n "GUANOSINE-5'-DIPHOSPHATE" ? 'C10 H15 N5 O11 P2' 443.201 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 30 ? ? ? A . n A 1 2 MET 2 31 ? ? ? A . n A 1 3 GLY 3 32 ? ? ? A . n A 1 4 PRO 4 33 ? ? ? A . n A 1 5 GLY 5 34 ? ? ? A . n A 1 6 GLU 6 35 ? ? ? A . n A 1 7 PRO 7 36 ? ? ? A . n A 1 8 GLY 8 37 ? ? ? A . n A 1 9 GLY 9 38 ? ? ? A . n A 1 10 ARG 10 39 ? ? ? A . n A 1 11 GLY 11 40 ? ? ? A . n A 1 12 ARG 12 41 ? ? ? A . n A 1 13 ALA 13 42 ? ? ? A . n A 1 14 GLY 14 43 ? ? ? A . n A 1 15 GLY 15 44 ? ? ? A . n A 1 16 ALA 16 45 ? ? ? A . n A 1 17 GLU 17 46 ? ? ? A . n A 1 18 GLY 18 47 ? ? ? A . n A 1 19 ARG 19 48 ? ? ? A . n A 1 20 GLY 20 49 49 GLY GLY A . n A 1 21 VAL 21 50 50 VAL VAL A . n A 1 22 LYS 22 51 51 LYS LYS A . n A 1 23 CYS 23 52 52 CYS CYS A . n A 1 24 VAL 24 53 53 VAL VAL A . n A 1 25 LEU 25 54 54 LEU LEU A . n A 1 26 VAL 26 55 55 VAL VAL A . n A 1 27 GLY 27 56 56 GLY GLY A . n A 1 28 ASP 28 57 57 ASP ASP A . n A 1 29 GLY 29 58 58 GLY GLY A . n A 1 30 ALA 30 59 59 ALA ALA A . n A 1 31 VAL 31 60 60 VAL VAL A . n A 1 32 GLY 32 61 61 GLY GLY A . n A 1 33 LYS 33 62 62 LYS LYS A . n A 1 34 THR 34 63 63 THR THR A . n A 1 35 SER 35 64 64 SER SER A . n A 1 36 LEU 36 65 65 LEU LEU A . n A 1 37 VAL 37 66 66 VAL VAL A . n A 1 38 VAL 38 67 67 VAL VAL A . n A 1 39 SER 39 68 68 SER SER A . n A 1 40 TYR 40 69 69 TYR TYR A . n A 1 41 THR 41 70 70 THR THR A . n A 1 42 THR 42 71 71 THR THR A . n A 1 43 ASN 43 72 ? ? ? A . n A 1 44 GLY 44 73 ? ? ? A . n A 1 45 TYR 45 74 ? ? ? A . n A 1 46 PRO 46 75 ? ? ? A . n A 1 47 THR 47 76 ? ? ? A . n A 1 48 GLU 48 77 ? ? ? A . n A 1 49 TYR 49 78 ? ? ? A . n A 1 50 ILE 50 79 ? ? ? A . n A 1 51 PRO 51 80 80 PRO PRO A . n A 1 52 THR 52 81 81 THR THR A . n A 1 53 ALA 53 82 82 ALA ALA A . n A 1 54 PHE 54 83 83 PHE PHE A . n A 1 55 ASP 55 84 84 ASP ASP A . n A 1 56 ASN 56 85 85 ASN ASN A . n A 1 57 PHE 57 86 86 PHE PHE A . n A 1 58 SER 58 87 87 SER SER A . n A 1 59 ALA 59 88 88 ALA ALA A . n A 1 60 VAL 60 89 89 VAL VAL A . n A 1 61 VAL 61 90 90 VAL VAL A . n A 1 62 SER 62 91 91 SER SER A . n A 1 63 VAL 63 92 92 VAL VAL A . n A 1 64 ASP 64 93 93 ASP ASP A . n A 1 65 GLY 65 94 94 GLY GLY A . n A 1 66 ARG 66 95 95 ARG ARG A . n A 1 67 PRO 67 96 96 PRO PRO A . n A 1 68 VAL 68 97 97 VAL VAL A . n A 1 69 ARG 69 98 98 ARG ARG A . n A 1 70 LEU 70 99 99 LEU LEU A . n A 1 71 GLN 71 100 100 GLN GLN A . n A 1 72 LEU 72 101 101 LEU LEU A . n A 1 73 CYS 73 102 102 CYS CYS A . n A 1 74 ASP 74 103 103 ASP ASP A . n A 1 75 THR 75 104 104 THR THR A . n A 1 76 ALA 76 105 105 ALA ALA A . n A 1 77 GLY 77 106 106 GLY GLY A . n A 1 78 GLN 78 107 107 GLN GLN A . n A 1 79 ASP 79 108 108 ASP ASP A . n A 1 80 GLU 80 109 109 GLU GLU A . n A 1 81 PHE 81 110 110 PHE PHE A . n A 1 82 ASP 82 111 111 ASP ASP A . n A 1 83 LYS 83 112 112 LYS LYS A . n A 1 84 LEU 84 113 113 LEU LEU A . n A 1 85 ARG 85 114 114 ARG ARG A . n A 1 86 PRO 86 115 115 PRO PRO A . n A 1 87 LEU 87 116 116 LEU LEU A . n A 1 88 CYS 88 117 117 CYS CYS A . n A 1 89 TYR 89 118 118 TYR TYR A . n A 1 90 THR 90 119 119 THR THR A . n A 1 91 ASN 91 120 120 ASN ASN A . n A 1 92 THR 92 121 121 THR THR A . n A 1 93 ASP 93 122 122 ASP ASP A . n A 1 94 ILE 94 123 123 ILE ILE A . n A 1 95 PHE 95 124 124 PHE PHE A . n A 1 96 LEU 96 125 125 LEU LEU A . n A 1 97 LEU 97 126 126 LEU LEU A . n A 1 98 CYS 98 127 127 CYS CYS A . n A 1 99 PHE 99 128 128 PHE PHE A . n A 1 100 SER 100 129 129 SER SER A . n A 1 101 VAL 101 130 130 VAL VAL A . n A 1 102 VAL 102 131 131 VAL VAL A . n A 1 103 SER 103 132 132 SER SER A . n A 1 104 PRO 104 133 133 PRO PRO A . n A 1 105 SER 105 134 134 SER SER A . n A 1 106 SER 106 135 135 SER SER A . n A 1 107 PHE 107 136 136 PHE PHE A . n A 1 108 GLN 108 137 137 GLN GLN A . n A 1 109 ASN 109 138 138 ASN ASN A . n A 1 110 VAL 110 139 139 VAL VAL A . n A 1 111 SER 111 140 140 SER SER A . n A 1 112 GLU 112 141 141 GLU GLU A . n A 1 113 LYS 113 142 142 LYS LYS A . n A 1 114 TRP 114 143 143 TRP TRP A . n A 1 115 VAL 115 144 144 VAL VAL A . n A 1 116 PRO 116 145 145 PRO PRO A . n A 1 117 GLU 117 146 146 GLU GLU A . n A 1 118 ILE 118 147 147 ILE ILE A . n A 1 119 ARG 119 148 148 ARG ARG A . n A 1 120 CYS 120 149 149 CYS CYS A . n A 1 121 HIS 121 150 150 HIS HIS A . n A 1 122 CYS 122 151 151 CYS CYS A . n A 1 123 PRO 123 152 152 PRO PRO A . n A 1 124 LYS 124 153 153 LYS LYS A . n A 1 125 ALA 125 154 154 ALA ALA A . n A 1 126 PRO 126 155 155 PRO PRO A . n A 1 127 ILE 127 156 156 ILE ILE A . n A 1 128 ILE 128 157 157 ILE ILE A . n A 1 129 LEU 129 158 158 LEU LEU A . n A 1 130 VAL 130 159 159 VAL VAL A . n A 1 131 GLY 131 160 160 GLY GLY A . n A 1 132 THR 132 161 161 THR THR A . n A 1 133 GLN 133 162 162 GLN GLN A . n A 1 134 SER 134 163 163 SER SER A . n A 1 135 ASP 135 164 164 ASP ASP A . n A 1 136 LEU 136 165 165 LEU LEU A . n A 1 137 ARG 137 166 166 ARG ARG A . n A 1 138 GLU 138 167 167 GLU GLU A . n A 1 139 ASP 139 168 168 ASP ASP A . n A 1 140 VAL 140 169 169 VAL VAL A . n A 1 141 LYS 141 170 170 LYS LYS A . n A 1 142 VAL 142 171 171 VAL VAL A . n A 1 143 LEU 143 172 172 LEU LEU A . n A 1 144 ILE 144 173 173 ILE ILE A . n A 1 145 GLU 145 174 174 GLU GLU A . n A 1 146 LEU 146 175 175 LEU LEU A . n A 1 147 ASP 147 176 176 ASP ASP A . n A 1 148 LYS 148 177 177 LYS LYS A . n A 1 149 CYS 149 178 178 CYS CYS A . n A 1 150 LYS 150 179 179 LYS LYS A . n A 1 151 GLU 151 180 180 GLU GLU A . n A 1 152 LYS 152 181 181 LYS LYS A . n A 1 153 PRO 153 182 182 PRO PRO A . n A 1 154 VAL 154 183 183 VAL VAL A . n A 1 155 PRO 155 184 184 PRO PRO A . n A 1 156 GLU 156 185 185 GLU GLU A . n A 1 157 GLU 157 186 186 GLU GLU A . n A 1 158 ALA 158 187 187 ALA ALA A . n A 1 159 ALA 159 188 188 ALA ALA A . n A 1 160 LYS 160 189 189 LYS LYS A . n A 1 161 LEU 161 190 190 LEU LEU A . n A 1 162 LEU 162 191 191 LEU LEU A . n A 1 163 ALA 163 192 192 ALA ALA A . n A 1 164 GLU 164 193 193 GLU GLU A . n A 1 165 GLU 165 194 194 GLU GLU A . n A 1 166 ILE 166 195 195 ILE ILE A . n A 1 167 LYS 167 196 196 LYS LYS A . n A 1 168 ALA 168 197 197 ALA ALA A . n A 1 169 ALA 169 198 198 ALA ALA A . n A 1 170 SER 170 199 199 SER SER A . n A 1 171 TYR 171 200 200 TYR TYR A . n A 1 172 ILE 172 201 201 ILE ILE A . n A 1 173 GLU 173 202 202 GLU GLU A . n A 1 174 CYS 174 203 203 CYS CYS A . n A 1 175 SER 175 204 204 SER SER A . n A 1 176 ALA 176 205 205 ALA ALA A . n A 1 177 LEU 177 206 206 LEU LEU A . n A 1 178 THR 178 207 207 THR THR A . n A 1 179 GLN 179 208 208 GLN GLN A . n A 1 180 LYS 180 209 209 LYS LYS A . n A 1 181 ASN 181 210 210 ASN ASN A . n A 1 182 LEU 182 211 211 LEU LEU A . n A 1 183 LYS 183 212 212 LYS LYS A . n A 1 184 GLU 184 213 213 GLU GLU A . n A 1 185 VAL 185 214 214 VAL VAL A . n A 1 186 PHE 186 215 215 PHE PHE A . n A 1 187 ASP 187 216 216 ASP ASP A . n A 1 188 ALA 188 217 217 ALA ALA A . n A 1 189 ALA 189 218 218 ALA ALA A . n A 1 190 ILE 190 219 219 ILE ILE A . n A 1 191 VAL 191 220 220 VAL VAL A . n A 1 192 ALA 192 221 221 ALA ALA A . n A 1 193 GLY 193 222 222 GLY GLY A . n A 1 194 ILE 194 223 223 ILE ILE A . n A 1 195 GLN 195 224 224 GLN GLN A . n A 1 196 TYR 196 225 225 TYR TYR A . n A 1 197 SER 197 226 226 SER SER A . n A 1 198 ASP 198 227 227 ASP ASP A . n A 1 199 THR 199 228 ? ? ? A . n A 1 200 GLN 200 229 ? ? ? A . n A 1 201 GLN 201 230 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG 1 1 1 MG MG A . C 3 GDP 1 3444 3444 GDP GDP A . D 4 HOH 1 3445 2 HOH HOH A . D 4 HOH 2 3446 3 HOH HOH A . D 4 HOH 3 3447 4 HOH HOH A . D 4 HOH 4 3448 5 HOH HOH A . D 4 HOH 5 3449 6 HOH HOH A . D 4 HOH 6 3450 8 HOH HOH A . D 4 HOH 7 3451 9 HOH HOH A . D 4 HOH 8 3452 10 HOH HOH A . D 4 HOH 9 3453 11 HOH HOH A . D 4 HOH 10 3454 12 HOH HOH A . D 4 HOH 11 3455 13 HOH HOH A . D 4 HOH 12 3456 14 HOH HOH A . D 4 HOH 13 3457 15 HOH HOH A . D 4 HOH 14 3458 16 HOH HOH A . D 4 HOH 15 3459 17 HOH HOH A . D 4 HOH 16 3460 18 HOH HOH A . D 4 HOH 17 3461 19 HOH HOH A . D 4 HOH 18 3462 20 HOH HOH A . D 4 HOH 19 3463 21 HOH HOH A . D 4 HOH 20 3464 24 HOH HOH A . D 4 HOH 21 3465 25 HOH HOH A . D 4 HOH 22 3466 26 HOH HOH A . D 4 HOH 23 3467 27 HOH HOH A . D 4 HOH 24 3468 28 HOH HOH A . D 4 HOH 25 3469 29 HOH HOH A . D 4 HOH 26 3470 30 HOH HOH A . D 4 HOH 27 3471 33 HOH HOH A . D 4 HOH 28 3472 34 HOH HOH A . D 4 HOH 29 3473 35 HOH HOH A . D 4 HOH 30 3474 36 HOH HOH A . D 4 HOH 31 3475 37 HOH HOH A . D 4 HOH 32 3476 39 HOH HOH A . D 4 HOH 33 3477 40 HOH HOH A . D 4 HOH 34 3478 42 HOH HOH A . D 4 HOH 35 3479 43 HOH HOH A . D 4 HOH 36 3480 48 HOH HOH A . D 4 HOH 37 3481 49 HOH HOH A . D 4 HOH 38 3482 50 HOH HOH A . D 4 HOH 39 3483 51 HOH HOH A . D 4 HOH 40 3484 52 HOH HOH A . D 4 HOH 41 3485 53 HOH HOH A . D 4 HOH 42 3486 54 HOH HOH A . D 4 HOH 43 3487 55 HOH HOH A . D 4 HOH 44 3488 56 HOH HOH A . D 4 HOH 45 3489 58 HOH HOH A . D 4 HOH 46 3490 59 HOH HOH A . D 4 HOH 47 3491 60 HOH HOH A . D 4 HOH 48 3492 61 HOH HOH A . D 4 HOH 49 3493 65 HOH HOH A . D 4 HOH 50 3494 66 HOH HOH A . D 4 HOH 51 3495 67 HOH HOH A . D 4 HOH 52 3496 68 HOH HOH A . D 4 HOH 53 3497 69 HOH HOH A . D 4 HOH 54 3498 70 HOH HOH A . D 4 HOH 55 3499 71 HOH HOH A . D 4 HOH 56 3500 72 HOH HOH A . D 4 HOH 57 3501 73 HOH HOH A . D 4 HOH 58 3502 74 HOH HOH A . D 4 HOH 59 3503 75 HOH HOH A . D 4 HOH 60 3504 76 HOH HOH A . D 4 HOH 61 3505 77 HOH HOH A . D 4 HOH 62 3506 78 HOH HOH A . D 4 HOH 63 3507 79 HOH HOH A . D 4 HOH 64 3508 80 HOH HOH A . D 4 HOH 65 3509 81 HOH HOH A . D 4 HOH 66 3510 82 HOH HOH A . D 4 HOH 67 3511 83 HOH HOH A . D 4 HOH 68 3512 84 HOH HOH A . D 4 HOH 69 3513 85 HOH HOH A . D 4 HOH 70 3514 86 HOH HOH A . D 4 HOH 71 3515 87 HOH HOH A . D 4 HOH 72 3516 88 HOH HOH A . D 4 HOH 73 3517 89 HOH HOH A . D 4 HOH 74 3518 90 HOH HOH A . D 4 HOH 75 3519 91 HOH HOH A . D 4 HOH 76 3520 92 HOH HOH A . D 4 HOH 77 3521 93 HOH HOH A . D 4 HOH 78 3522 94 HOH HOH A . D 4 HOH 79 3523 95 HOH HOH A . D 4 HOH 80 3524 96 HOH HOH A . D 4 HOH 81 3525 97 HOH HOH A . D 4 HOH 82 3526 98 HOH HOH A . D 4 HOH 83 3527 99 HOH HOH A . D 4 HOH 84 3528 100 HOH HOH A . D 4 HOH 85 3529 101 HOH HOH A . D 4 HOH 86 3530 102 HOH HOH A . D 4 HOH 87 3531 103 HOH HOH A . D 4 HOH 88 3532 104 HOH HOH A . D 4 HOH 89 3533 105 HOH HOH A . D 4 HOH 90 3534 106 HOH HOH A . D 4 HOH 91 3535 107 HOH HOH A . D 4 HOH 92 3536 108 HOH HOH A . D 4 HOH 93 3537 109 HOH HOH A . D 4 HOH 94 3538 110 HOH HOH A . D 4 HOH 95 3539 111 HOH HOH A . D 4 HOH 96 3540 112 HOH HOH A . D 4 HOH 97 3541 113 HOH HOH A . D 4 HOH 98 3542 114 HOH HOH A . D 4 HOH 99 3543 115 HOH HOH A . D 4 HOH 100 3544 116 HOH HOH A . D 4 HOH 101 3545 117 HOH HOH A . D 4 HOH 102 3546 118 HOH HOH A . D 4 HOH 103 3547 119 HOH HOH A . D 4 HOH 104 3548 120 HOH HOH A . D 4 HOH 105 3549 121 HOH HOH A . D 4 HOH 106 3550 122 HOH HOH A . D 4 HOH 107 3551 123 HOH HOH A . D 4 HOH 108 3552 124 HOH HOH A . D 4 HOH 109 3553 125 HOH HOH A . D 4 HOH 110 3554 126 HOH HOH A . D 4 HOH 111 3555 127 HOH HOH A . D 4 HOH 112 3556 128 HOH HOH A . D 4 HOH 113 3557 129 HOH HOH A . D 4 HOH 114 3558 130 HOH HOH A . D 4 HOH 115 3559 131 HOH HOH A . D 4 HOH 116 3560 132 HOH HOH A . D 4 HOH 117 3561 133 HOH HOH A . D 4 HOH 118 3562 134 HOH HOH A . D 4 HOH 119 3563 135 HOH HOH A . D 4 HOH 120 3564 136 HOH HOH A . D 4 HOH 121 3565 137 HOH HOH A . D 4 HOH 122 3566 138 HOH HOH A . D 4 HOH 123 3567 139 HOH HOH A . D 4 HOH 124 3568 140 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 112 ? CG ? A LYS 83 CG 2 1 Y 1 A LYS 112 ? CD ? A LYS 83 CD 3 1 Y 1 A LYS 112 ? CE ? A LYS 83 CE 4 1 Y 1 A LYS 112 ? NZ ? A LYS 83 NZ 5 1 Y 1 A LEU 113 ? CG ? A LEU 84 CG 6 1 Y 1 A LEU 113 ? CD1 ? A LEU 84 CD1 7 1 Y 1 A LEU 113 ? CD2 ? A LEU 84 CD2 8 1 Y 1 A GLN 137 ? CD ? A GLN 108 CD 9 1 Y 1 A GLN 137 ? OE1 ? A GLN 108 OE1 10 1 Y 1 A GLN 137 ? NE2 ? A GLN 108 NE2 11 1 Y 1 A LYS 153 ? CG ? A LYS 124 CG 12 1 Y 1 A LYS 153 ? CD ? A LYS 124 CD 13 1 Y 1 A LYS 153 ? CE ? A LYS 124 CE 14 1 Y 1 A LYS 153 ? NZ ? A LYS 124 NZ 15 1 Y 1 A LYS 170 ? CD ? A LYS 141 CD 16 1 Y 1 A LYS 170 ? CE ? A LYS 141 CE 17 1 Y 1 A LYS 170 ? NZ ? A LYS 141 NZ 18 1 Y 1 A GLU 186 ? CD ? A GLU 157 CD 19 1 Y 1 A GLU 186 ? OE1 ? A GLU 157 OE1 20 1 Y 1 A GLU 186 ? OE2 ? A GLU 157 OE2 21 1 Y 1 A LYS 189 ? NZ ? A LYS 160 NZ 22 1 Y 1 A GLU 194 ? CD ? A GLU 165 CD 23 1 Y 1 A GLU 194 ? OE1 ? A GLU 165 OE1 24 1 Y 1 A GLU 194 ? OE2 ? A GLU 165 OE2 25 1 Y 1 A LYS 196 ? CE ? A LYS 167 CE 26 1 Y 1 A LYS 196 ? NZ ? A LYS 167 NZ 27 1 Y 1 A LYS 212 ? CD ? A LYS 183 CD 28 1 Y 1 A LYS 212 ? CE ? A LYS 183 CE 29 1 Y 1 A LYS 212 ? NZ ? A LYS 183 NZ # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.3.0034 ? 1 HKL-2000 'data collection' . ? 2 HKL-2000 'data reduction' . ? 3 SCALEPACK 'data scaling' . ? 4 PHASER phasing . ? 5 # _cell.entry_id 2Q3H _cell.length_a 82.068 _cell.length_b 53.600 _cell.length_c 54.128 _cell.angle_alpha 90.00 _cell.angle_beta 118.80 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2Q3H _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # _exptl.entry_id 2Q3H _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.40 _exptl_crystal.density_percent_sol 48.83 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_details '0.2M MgCl2; 0.1M TRIS; 25% PEG 3350, pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 298K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.pdbx_collection_date 2007-04-16 _diffrn_detector.details 'Si(111)' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.03315 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SLS BEAMLINE X10SA' _diffrn_source.pdbx_synchrotron_site SLS _diffrn_source.pdbx_synchrotron_beamline X10SA _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.03315 # _reflns.entry_id 2Q3H _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.d_resolution_high 1.73 _reflns.d_resolution_low 47.46 _reflns.number_all 21616 _reflns.number_obs 21530 _reflns.percent_possible_obs 99.6 _reflns.pdbx_Rmerge_I_obs 0.033 _reflns.pdbx_Rsym_value 0.049 _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 4.3 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.73 _reflns_shell.d_res_low 1.79 _reflns_shell.percent_possible_all 98.0 _reflns_shell.Rmerge_I_obs 0.490 _reflns_shell.pdbx_Rsym_value 0.387 _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy 3.9 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 2077 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 2Q3H _refine.ls_number_reflns_obs 20423 _refine.ls_number_reflns_all 21616 _refine.pdbx_ls_sigma_I 0 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 47.46 _refine.ls_d_res_high 1.73 _refine.ls_percent_reflns_obs 99.56 _refine.ls_R_factor_obs 0.18474 _refine.ls_R_factor_all 0.18276 _refine.ls_R_factor_R_work 0.18276 _refine.ls_R_factor_R_free 0.22198 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 1107 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.968 _refine.correlation_coeff_Fo_to_Fc_free 0.952 _refine.B_iso_mean 35.051 _refine.aniso_B[1][1] -1.62 _refine.aniso_B[2][2] 1.50 _refine.aniso_B[3][3] -1.82 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] -2.01 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'homology based model' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.101 _refine.pdbx_overall_ESU_R_Free 0.104 _refine.overall_SU_ML 0.083 _refine.overall_SU_B 4.621 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1276 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 29 _refine_hist.number_atoms_solvent 124 _refine_hist.number_atoms_total 1429 _refine_hist.d_res_high 1.73 _refine_hist.d_res_low 47.46 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.016 0.022 ? 1336 'X-RAY DIFFRACTION' ? r_bond_other_d 0.003 0.020 ? 861 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.686 2.001 ? 1828 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.977 3.000 ? 2131 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 7.476 5.000 ? 171 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 38.699 25.306 ? 49 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 13.934 15.000 ? 213 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 14.968 15.000 ? 5 'X-RAY DIFFRACTION' ? r_chiral_restr 0.102 0.200 ? 224 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.006 0.020 ? 1458 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 246 'X-RAY DIFFRACTION' ? r_nbd_refined 0.228 0.200 ? 280 'X-RAY DIFFRACTION' ? r_nbd_other 0.197 0.200 ? 913 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.182 0.200 ? 669 'X-RAY DIFFRACTION' ? r_nbtor_other 0.087 0.200 ? 682 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.167 0.200 ? 113 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined 0.335 0.200 ? 2 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.533 0.200 ? 5 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 0.274 0.200 ? 13 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.082 0.200 ? 4 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 3.420 3.000 ? 879 'X-RAY DIFFRACTION' ? r_mcbond_other 1.045 3.000 ? 341 'X-RAY DIFFRACTION' ? r_mcangle_it 4.299 5.000 ? 1398 'X-RAY DIFFRACTION' ? r_scbond_it 6.752 8.000 ? 521 'X-RAY DIFFRACTION' ? r_scangle_it 8.106 11.000 ? 429 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.730 _refine_ls_shell.d_res_low 1.775 _refine_ls_shell.number_reflns_R_work 1441 _refine_ls_shell.R_factor_R_work 0.238 _refine_ls_shell.percent_reflns_obs 97.13 _refine_ls_shell.R_factor_R_free 0.288 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 84 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 2Q3H _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 2Q3H _struct.title 'The crystal structure of RhouA in the GDP-bound state.' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2Q3H _struct_keywords.pdbx_keywords 'STRUCTURAL GENOMICS' _struct_keywords.text 'GTPase, Structural Genomics, Structural Genomics Consortium, SGC' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q9NPY5_HUMAN _struct_ref.pdbx_db_accession Q9NPY5 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;GPGEPGGRGRAGGAEGRGVKCVLVGDGAVGKTSLVVSYTTNGYPTEYIPTAFDNFSAVVSVDGRPVRLQLCDTAGQDEFD KLRPLCYTNTDIFLLCFSVVSPSSFQNVSEKWVPEIRCHCPKAPIILVGTQSDLREDVKVLIELDKCKEKPVPEEAAKLC AEEIKAASYIECSALTQKNLKEVFDAAIVAGIQYSDTQQ ; _struct_ref.pdbx_align_begin 32 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2Q3H _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 201 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9NPY5 _struct_ref_seq.db_align_beg 32 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 230 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 32 _struct_ref_seq.pdbx_auth_seq_align_end 230 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2Q3H SER A 1 ? UNP Q9NPY5 ? ? 'cloning artifact' 30 1 1 2Q3H MET A 2 ? UNP Q9NPY5 ? ? 'cloning artifact' 31 2 1 2Q3H LEU A 162 ? UNP Q9NPY5 CYS 191 conflict 191 3 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details 'the monomer in the asu represents a biological unit' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 32 ? THR A 42 ? GLY A 61 THR A 71 1 ? 11 HELX_P HELX_P2 2 LEU A 84 ? THR A 90 ? LEU A 113 THR A 119 5 ? 7 HELX_P HELX_P3 3 SER A 103 ? LYS A 113 ? SER A 132 LYS A 142 1 ? 11 HELX_P HELX_P4 4 LYS A 113 ? CYS A 122 ? LYS A 142 CYS A 151 1 ? 10 HELX_P HELX_P5 5 GLN A 133 ? GLU A 138 ? GLN A 162 GLU A 167 5 ? 6 HELX_P HELX_P6 6 ASP A 139 ? LYS A 148 ? ASP A 168 LYS A 177 1 ? 10 HELX_P HELX_P7 7 PRO A 155 ? LYS A 167 ? PRO A 184 LYS A 196 1 ? 13 HELX_P HELX_P8 8 ASN A 181 ? ASP A 198 ? ASN A 210 ASP A 227 1 ? 18 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 120 SG ? ? ? 1_555 A CYS 149 SG ? ? A CYS 149 A CYS 178 4_555 ? ? ? ? ? ? ? 2.443 ? ? metalc1 metalc ? ? B MG . MG ? ? ? 1_555 A THR 34 OG1 ? ? A MG 1 A THR 63 1_555 ? ? ? ? ? ? ? 1.999 ? ? metalc2 metalc ? ? B MG . MG ? ? ? 1_555 C GDP . O2B ? ? A MG 1 A GDP 3444 1_555 ? ? ? ? ? ? ? 2.179 ? ? metalc3 metalc ? ? B MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 1 A HOH 3499 1_555 ? ? ? ? ? ? ? 1.608 ? ? metalc4 metalc ? ? B MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 1 A HOH 3500 1_555 ? ? ? ? ? ? ? 1.709 ? ? metalc5 metalc ? ? B MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 1 A HOH 3501 1_555 ? ? ? ? ? ? ? 2.275 ? ? metalc6 metalc ? ? B MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 1 A HOH 3504 1_555 ? ? ? ? ? ? ? 2.136 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OG1 ? A THR 34 ? A THR 63 ? 1_555 MG ? B MG . ? A MG 1 ? 1_555 O2B ? C GDP . ? A GDP 3444 ? 1_555 89.1 ? 2 OG1 ? A THR 34 ? A THR 63 ? 1_555 MG ? B MG . ? A MG 1 ? 1_555 O ? D HOH . ? A HOH 3499 ? 1_555 76.4 ? 3 O2B ? C GDP . ? A GDP 3444 ? 1_555 MG ? B MG . ? A MG 1 ? 1_555 O ? D HOH . ? A HOH 3499 ? 1_555 76.4 ? 4 OG1 ? A THR 34 ? A THR 63 ? 1_555 MG ? B MG . ? A MG 1 ? 1_555 O ? D HOH . ? A HOH 3500 ? 1_555 105.4 ? 5 O2B ? C GDP . ? A GDP 3444 ? 1_555 MG ? B MG . ? A MG 1 ? 1_555 O ? D HOH . ? A HOH 3500 ? 1_555 103.1 ? 6 O ? D HOH . ? A HOH 3499 ? 1_555 MG ? B MG . ? A MG 1 ? 1_555 O ? D HOH . ? A HOH 3500 ? 1_555 178.1 ? 7 OG1 ? A THR 34 ? A THR 63 ? 1_555 MG ? B MG . ? A MG 1 ? 1_555 O ? D HOH . ? A HOH 3501 ? 1_555 148.6 ? 8 O2B ? C GDP . ? A GDP 3444 ? 1_555 MG ? B MG . ? A MG 1 ? 1_555 O ? D HOH . ? A HOH 3501 ? 1_555 82.8 ? 9 O ? D HOH . ? A HOH 3499 ? 1_555 MG ? B MG . ? A MG 1 ? 1_555 O ? D HOH . ? A HOH 3501 ? 1_555 72.2 ? 10 O ? D HOH . ? A HOH 3500 ? 1_555 MG ? B MG . ? A MG 1 ? 1_555 O ? D HOH . ? A HOH 3501 ? 1_555 106.0 ? 11 OG1 ? A THR 34 ? A THR 63 ? 1_555 MG ? B MG . ? A MG 1 ? 1_555 O ? D HOH . ? A HOH 3504 ? 1_555 89.7 ? 12 O2B ? C GDP . ? A GDP 3444 ? 1_555 MG ? B MG . ? A MG 1 ? 1_555 O ? D HOH . ? A HOH 3504 ? 1_555 154.5 ? 13 O ? D HOH . ? A HOH 3499 ? 1_555 MG ? B MG . ? A MG 1 ? 1_555 O ? D HOH . ? A HOH 3504 ? 1_555 78.6 ? 14 O ? D HOH . ? A HOH 3500 ? 1_555 MG ? B MG . ? A MG 1 ? 1_555 O ? D HOH . ? A HOH 3504 ? 1_555 101.8 ? 15 O ? D HOH . ? A HOH 3501 ? 1_555 MG ? B MG . ? A MG 1 ? 1_555 O ? D HOH . ? A HOH 3504 ? 1_555 85.1 ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 6 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ASP A 55 ? VAL A 63 ? ASP A 84 VAL A 92 A 2 ARG A 66 ? ASP A 74 ? ARG A 95 ASP A 103 A 3 VAL A 21 ? VAL A 26 ? VAL A 50 VAL A 55 A 4 ILE A 94 ? SER A 100 ? ILE A 123 SER A 129 A 5 ILE A 127 ? THR A 132 ? ILE A 156 THR A 161 A 6 SER A 170 ? GLU A 173 ? SER A 199 GLU A 202 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N PHE A 57 ? N PHE A 86 O LEU A 72 ? O LEU A 101 A 2 3 O ARG A 69 ? O ARG A 98 N VAL A 21 ? N VAL A 50 A 3 4 N VAL A 26 ? N VAL A 55 O CYS A 98 ? O CYS A 127 A 4 5 N PHE A 99 ? N PHE A 128 O THR A 132 ? O THR A 161 A 5 6 N LEU A 129 ? N LEU A 158 O SER A 170 ? O SER A 199 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MG 1 ? 6 'BINDING SITE FOR RESIDUE MG A 1' AC2 Software A GDP 3444 ? 22 'BINDING SITE FOR RESIDUE GDP A 3444' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 THR A 34 ? THR A 63 . ? 1_555 ? 2 AC1 6 GDP C . ? GDP A 3444 . ? 1_555 ? 3 AC1 6 HOH D . ? HOH A 3499 . ? 1_555 ? 4 AC1 6 HOH D . ? HOH A 3500 . ? 1_555 ? 5 AC1 6 HOH D . ? HOH A 3501 . ? 1_555 ? 6 AC1 6 HOH D . ? HOH A 3504 . ? 1_555 ? 7 AC2 22 MG B . ? MG A 1 . ? 1_555 ? 8 AC2 22 ALA A 30 ? ALA A 59 . ? 1_555 ? 9 AC2 22 VAL A 31 ? VAL A 60 . ? 1_555 ? 10 AC2 22 GLY A 32 ? GLY A 61 . ? 1_555 ? 11 AC2 22 LYS A 33 ? LYS A 62 . ? 1_555 ? 12 AC2 22 THR A 34 ? THR A 63 . ? 1_555 ? 13 AC2 22 SER A 35 ? SER A 64 . ? 1_555 ? 14 AC2 22 GLN A 133 ? GLN A 162 . ? 1_555 ? 15 AC2 22 ASP A 135 ? ASP A 164 . ? 1_555 ? 16 AC2 22 LEU A 136 ? LEU A 165 . ? 1_555 ? 17 AC2 22 SER A 175 ? SER A 204 . ? 1_555 ? 18 AC2 22 ALA A 176 ? ALA A 205 . ? 1_555 ? 19 AC2 22 LEU A 177 ? LEU A 206 . ? 1_555 ? 20 AC2 22 HOH D . ? HOH A 3450 . ? 1_555 ? 21 AC2 22 HOH D . ? HOH A 3454 . ? 4_546 ? 22 AC2 22 HOH D . ? HOH A 3465 . ? 1_555 ? 23 AC2 22 HOH D . ? HOH A 3466 . ? 1_555 ? 24 AC2 22 HOH D . ? HOH A 3482 . ? 4_546 ? 25 AC2 22 HOH D . ? HOH A 3499 . ? 1_555 ? 26 AC2 22 HOH D . ? HOH A 3500 . ? 1_555 ? 27 AC2 22 HOH D . ? HOH A 3501 . ? 1_555 ? 28 AC2 22 HOH D . ? HOH A 3533 . ? 1_555 ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 3552 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 3553 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.17 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 NE _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ARG _pdbx_validate_rmsd_angle.auth_seq_id_1 114 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CZ _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ARG _pdbx_validate_rmsd_angle.auth_seq_id_2 114 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 NH2 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ARG _pdbx_validate_rmsd_angle.auth_seq_id_3 114 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 124.38 _pdbx_validate_rmsd_angle.angle_target_value 120.30 _pdbx_validate_rmsd_angle.angle_deviation 4.08 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.50 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR A 81 ? ? -170.51 -176.18 2 1 ASP A 111 ? ? 65.02 -12.06 3 1 LYS A 112 ? ? -48.83 -103.80 4 1 ASN A 210 ? ? 59.47 15.50 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 ASP _pdbx_validate_peptide_omega.auth_asym_id_1 A _pdbx_validate_peptide_omega.auth_seq_id_1 111 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 LYS _pdbx_validate_peptide_omega.auth_asym_id_2 A _pdbx_validate_peptide_omega.auth_seq_id_2 112 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega 134.11 # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'Structural Genomics Consortium' _pdbx_SG_project.initial_of_center SGC # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.pdbx_refine_id 1 ? refined 9.0861 -3.2303 14.6322 -0.1679 -0.0132 -0.1044 0.1276 -0.0609 -0.0479 5.2441 9.6858 2.1711 -4.0615 -0.5719 0.4615 0.5862 0.6493 -0.1600 -0.3367 -0.5596 0.5989 -0.2604 -0.5230 -0.0266 'X-RAY DIFFRACTION' 2 ? refined 14.2895 0.0041 10.8588 -0.0447 0.0013 -0.1122 0.1977 0.0147 0.0535 4.3903 4.9859 2.6607 -3.4276 -0.7349 0.9444 0.7873 0.9580 0.2871 -0.8143 -0.8336 0.1182 -0.3171 -0.4268 0.0463 'X-RAY DIFFRACTION' 3 ? refined 26.5595 -18.6476 17.1440 -0.1413 -0.2069 -0.1184 0.0241 -0.0693 -0.0543 5.7783 6.9632 4.9918 -1.6892 -1.5586 -0.0412 0.2259 0.6200 -0.5824 -0.3066 -0.2541 -0.0171 0.6267 0.0064 0.0282 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 A 49 A 20 A 71 A 42 ? 'X-RAY DIFFRACTION' ? 2 2 A 80 A 51 A 163 A 134 ? 'X-RAY DIFFRACTION' ? 3 2 A 164 A 135 A 184 A 155 ? 'X-RAY DIFFRACTION' ? 4 3 A 185 A 156 A 227 A 198 ? 'X-RAY DIFFRACTION' ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 30 ? A SER 1 2 1 Y 1 A MET 31 ? A MET 2 3 1 Y 1 A GLY 32 ? A GLY 3 4 1 Y 1 A PRO 33 ? A PRO 4 5 1 Y 1 A GLY 34 ? A GLY 5 6 1 Y 1 A GLU 35 ? A GLU 6 7 1 Y 1 A PRO 36 ? A PRO 7 8 1 Y 1 A GLY 37 ? A GLY 8 9 1 Y 1 A GLY 38 ? A GLY 9 10 1 Y 1 A ARG 39 ? A ARG 10 11 1 Y 1 A GLY 40 ? A GLY 11 12 1 Y 1 A ARG 41 ? A ARG 12 13 1 Y 1 A ALA 42 ? A ALA 13 14 1 Y 1 A GLY 43 ? A GLY 14 15 1 Y 1 A GLY 44 ? A GLY 15 16 1 Y 1 A ALA 45 ? A ALA 16 17 1 Y 1 A GLU 46 ? A GLU 17 18 1 Y 1 A GLY 47 ? A GLY 18 19 1 Y 1 A ARG 48 ? A ARG 19 20 1 Y 1 A ASN 72 ? A ASN 43 21 1 Y 1 A GLY 73 ? A GLY 44 22 1 Y 1 A TYR 74 ? A TYR 45 23 1 Y 1 A PRO 75 ? A PRO 46 24 1 Y 1 A THR 76 ? A THR 47 25 1 Y 1 A GLU 77 ? A GLU 48 26 1 Y 1 A TYR 78 ? A TYR 49 27 1 Y 1 A ILE 79 ? A ILE 50 28 1 Y 1 A THR 228 ? A THR 199 29 1 Y 1 A GLN 229 ? A GLN 200 30 1 Y 1 A GLN 230 ? A GLN 201 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GDP PB P N N 88 GDP O1B O N N 89 GDP O2B O N N 90 GDP O3B O N N 91 GDP O3A O N N 92 GDP PA P N N 93 GDP O1A O N N 94 GDP O2A O N N 95 GDP "O5'" O N N 96 GDP "C5'" C N N 97 GDP "C4'" C N R 98 GDP "O4'" O N N 99 GDP "C3'" C N S 100 GDP "O3'" O N N 101 GDP "C2'" C N R 102 GDP "O2'" O N N 103 GDP "C1'" C N R 104 GDP N9 N Y N 105 GDP C8 C Y N 106 GDP N7 N Y N 107 GDP C5 C Y N 108 GDP C6 C N N 109 GDP O6 O N N 110 GDP N1 N N N 111 GDP C2 C N N 112 GDP N2 N N N 113 GDP N3 N N N 114 GDP C4 C Y N 115 GDP HOB2 H N N 116 GDP HOB3 H N N 117 GDP HOA2 H N N 118 GDP "H5'" H N N 119 GDP "H5''" H N N 120 GDP "H4'" H N N 121 GDP "H3'" H N N 122 GDP "HO3'" H N N 123 GDP "H2'" H N N 124 GDP "HO2'" H N N 125 GDP "H1'" H N N 126 GDP H8 H N N 127 GDP HN1 H N N 128 GDP HN21 H N N 129 GDP HN22 H N N 130 GLN N N N N 131 GLN CA C N S 132 GLN C C N N 133 GLN O O N N 134 GLN CB C N N 135 GLN CG C N N 136 GLN CD C N N 137 GLN OE1 O N N 138 GLN NE2 N N N 139 GLN OXT O N N 140 GLN H H N N 141 GLN H2 H N N 142 GLN HA H N N 143 GLN HB2 H N N 144 GLN HB3 H N N 145 GLN HG2 H N N 146 GLN HG3 H N N 147 GLN HE21 H N N 148 GLN HE22 H N N 149 GLN HXT H N N 150 GLU N N N N 151 GLU CA C N S 152 GLU C C N N 153 GLU O O N N 154 GLU CB C N N 155 GLU CG C N N 156 GLU CD C N N 157 GLU OE1 O N N 158 GLU OE2 O N N 159 GLU OXT O N N 160 GLU H H N N 161 GLU H2 H N N 162 GLU HA H N N 163 GLU HB2 H N N 164 GLU HB3 H N N 165 GLU HG2 H N N 166 GLU HG3 H N N 167 GLU HE2 H N N 168 GLU HXT H N N 169 GLY N N N N 170 GLY CA C N N 171 GLY C C N N 172 GLY O O N N 173 GLY OXT O N N 174 GLY H H N N 175 GLY H2 H N N 176 GLY HA2 H N N 177 GLY HA3 H N N 178 GLY HXT H N N 179 HIS N N N N 180 HIS CA C N S 181 HIS C C N N 182 HIS O O N N 183 HIS CB C N N 184 HIS CG C Y N 185 HIS ND1 N Y N 186 HIS CD2 C Y N 187 HIS CE1 C Y N 188 HIS NE2 N Y N 189 HIS OXT O N N 190 HIS H H N N 191 HIS H2 H N N 192 HIS HA H N N 193 HIS HB2 H N N 194 HIS HB3 H N N 195 HIS HD1 H N N 196 HIS HD2 H N N 197 HIS HE1 H N N 198 HIS HE2 H N N 199 HIS HXT H N N 200 HOH O O N N 201 HOH H1 H N N 202 HOH H2 H N N 203 ILE N N N N 204 ILE CA C N S 205 ILE C C N N 206 ILE O O N N 207 ILE CB C N S 208 ILE CG1 C N N 209 ILE CG2 C N N 210 ILE CD1 C N N 211 ILE OXT O N N 212 ILE H H N N 213 ILE H2 H N N 214 ILE HA H N N 215 ILE HB H N N 216 ILE HG12 H N N 217 ILE HG13 H N N 218 ILE HG21 H N N 219 ILE HG22 H N N 220 ILE HG23 H N N 221 ILE HD11 H N N 222 ILE HD12 H N N 223 ILE HD13 H N N 224 ILE HXT H N N 225 LEU N N N N 226 LEU CA C N S 227 LEU C C N N 228 LEU O O N N 229 LEU CB C N N 230 LEU CG C N N 231 LEU CD1 C N N 232 LEU CD2 C N N 233 LEU OXT O N N 234 LEU H H N N 235 LEU H2 H N N 236 LEU HA H N N 237 LEU HB2 H N N 238 LEU HB3 H N N 239 LEU HG H N N 240 LEU HD11 H N N 241 LEU HD12 H N N 242 LEU HD13 H N N 243 LEU HD21 H N N 244 LEU HD22 H N N 245 LEU HD23 H N N 246 LEU HXT H N N 247 LYS N N N N 248 LYS CA C N S 249 LYS C C N N 250 LYS O O N N 251 LYS CB C N N 252 LYS CG C N N 253 LYS CD C N N 254 LYS CE C N N 255 LYS NZ N N N 256 LYS OXT O N N 257 LYS H H N N 258 LYS H2 H N N 259 LYS HA H N N 260 LYS HB2 H N N 261 LYS HB3 H N N 262 LYS HG2 H N N 263 LYS HG3 H N N 264 LYS HD2 H N N 265 LYS HD3 H N N 266 LYS HE2 H N N 267 LYS HE3 H N N 268 LYS HZ1 H N N 269 LYS HZ2 H N N 270 LYS HZ3 H N N 271 LYS HXT H N N 272 MET N N N N 273 MET CA C N S 274 MET C C N N 275 MET O O N N 276 MET CB C N N 277 MET CG C N N 278 MET SD S N N 279 MET CE C N N 280 MET OXT O N N 281 MET H H N N 282 MET H2 H N N 283 MET HA H N N 284 MET HB2 H N N 285 MET HB3 H N N 286 MET HG2 H N N 287 MET HG3 H N N 288 MET HE1 H N N 289 MET HE2 H N N 290 MET HE3 H N N 291 MET HXT H N N 292 MG MG MG N N 293 PHE N N N N 294 PHE CA C N S 295 PHE C C N N 296 PHE O O N N 297 PHE CB C N N 298 PHE CG C Y N 299 PHE CD1 C Y N 300 PHE CD2 C Y N 301 PHE CE1 C Y N 302 PHE CE2 C Y N 303 PHE CZ C Y N 304 PHE OXT O N N 305 PHE H H N N 306 PHE H2 H N N 307 PHE HA H N N 308 PHE HB2 H N N 309 PHE HB3 H N N 310 PHE HD1 H N N 311 PHE HD2 H N N 312 PHE HE1 H N N 313 PHE HE2 H N N 314 PHE HZ H N N 315 PHE HXT H N N 316 PRO N N N N 317 PRO CA C N S 318 PRO C C N N 319 PRO O O N N 320 PRO CB C N N 321 PRO CG C N N 322 PRO CD C N N 323 PRO OXT O N N 324 PRO H H N N 325 PRO HA H N N 326 PRO HB2 H N N 327 PRO HB3 H N N 328 PRO HG2 H N N 329 PRO HG3 H N N 330 PRO HD2 H N N 331 PRO HD3 H N N 332 PRO HXT H N N 333 SER N N N N 334 SER CA C N S 335 SER C C N N 336 SER O O N N 337 SER CB C N N 338 SER OG O N N 339 SER OXT O N N 340 SER H H N N 341 SER H2 H N N 342 SER HA H N N 343 SER HB2 H N N 344 SER HB3 H N N 345 SER HG H N N 346 SER HXT H N N 347 THR N N N N 348 THR CA C N S 349 THR C C N N 350 THR O O N N 351 THR CB C N R 352 THR OG1 O N N 353 THR CG2 C N N 354 THR OXT O N N 355 THR H H N N 356 THR H2 H N N 357 THR HA H N N 358 THR HB H N N 359 THR HG1 H N N 360 THR HG21 H N N 361 THR HG22 H N N 362 THR HG23 H N N 363 THR HXT H N N 364 TRP N N N N 365 TRP CA C N S 366 TRP C C N N 367 TRP O O N N 368 TRP CB C N N 369 TRP CG C Y N 370 TRP CD1 C Y N 371 TRP CD2 C Y N 372 TRP NE1 N Y N 373 TRP CE2 C Y N 374 TRP CE3 C Y N 375 TRP CZ2 C Y N 376 TRP CZ3 C Y N 377 TRP CH2 C Y N 378 TRP OXT O N N 379 TRP H H N N 380 TRP H2 H N N 381 TRP HA H N N 382 TRP HB2 H N N 383 TRP HB3 H N N 384 TRP HD1 H N N 385 TRP HE1 H N N 386 TRP HE3 H N N 387 TRP HZ2 H N N 388 TRP HZ3 H N N 389 TRP HH2 H N N 390 TRP HXT H N N 391 TYR N N N N 392 TYR CA C N S 393 TYR C C N N 394 TYR O O N N 395 TYR CB C N N 396 TYR CG C Y N 397 TYR CD1 C Y N 398 TYR CD2 C Y N 399 TYR CE1 C Y N 400 TYR CE2 C Y N 401 TYR CZ C Y N 402 TYR OH O N N 403 TYR OXT O N N 404 TYR H H N N 405 TYR H2 H N N 406 TYR HA H N N 407 TYR HB2 H N N 408 TYR HB3 H N N 409 TYR HD1 H N N 410 TYR HD2 H N N 411 TYR HE1 H N N 412 TYR HE2 H N N 413 TYR HH H N N 414 TYR HXT H N N 415 VAL N N N N 416 VAL CA C N S 417 VAL C C N N 418 VAL O O N N 419 VAL CB C N N 420 VAL CG1 C N N 421 VAL CG2 C N N 422 VAL OXT O N N 423 VAL H H N N 424 VAL H2 H N N 425 VAL HA H N N 426 VAL HB H N N 427 VAL HG11 H N N 428 VAL HG12 H N N 429 VAL HG13 H N N 430 VAL HG21 H N N 431 VAL HG22 H N N 432 VAL HG23 H N N 433 VAL HXT H N N 434 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GDP PB O1B doub N N 83 GDP PB O2B sing N N 84 GDP PB O3B sing N N 85 GDP PB O3A sing N N 86 GDP O2B HOB2 sing N N 87 GDP O3B HOB3 sing N N 88 GDP O3A PA sing N N 89 GDP PA O1A doub N N 90 GDP PA O2A sing N N 91 GDP PA "O5'" sing N N 92 GDP O2A HOA2 sing N N 93 GDP "O5'" "C5'" sing N N 94 GDP "C5'" "C4'" sing N N 95 GDP "C5'" "H5'" sing N N 96 GDP "C5'" "H5''" sing N N 97 GDP "C4'" "O4'" sing N N 98 GDP "C4'" "C3'" sing N N 99 GDP "C4'" "H4'" sing N N 100 GDP "O4'" "C1'" sing N N 101 GDP "C3'" "O3'" sing N N 102 GDP "C3'" "C2'" sing N N 103 GDP "C3'" "H3'" sing N N 104 GDP "O3'" "HO3'" sing N N 105 GDP "C2'" "O2'" sing N N 106 GDP "C2'" "C1'" sing N N 107 GDP "C2'" "H2'" sing N N 108 GDP "O2'" "HO2'" sing N N 109 GDP "C1'" N9 sing N N 110 GDP "C1'" "H1'" sing N N 111 GDP N9 C8 sing Y N 112 GDP N9 C4 sing Y N 113 GDP C8 N7 doub Y N 114 GDP C8 H8 sing N N 115 GDP N7 C5 sing Y N 116 GDP C5 C6 sing N N 117 GDP C5 C4 doub Y N 118 GDP C6 O6 doub N N 119 GDP C6 N1 sing N N 120 GDP N1 C2 sing N N 121 GDP N1 HN1 sing N N 122 GDP C2 N2 sing N N 123 GDP C2 N3 doub N N 124 GDP N2 HN21 sing N N 125 GDP N2 HN22 sing N N 126 GDP N3 C4 sing N N 127 GLN N CA sing N N 128 GLN N H sing N N 129 GLN N H2 sing N N 130 GLN CA C sing N N 131 GLN CA CB sing N N 132 GLN CA HA sing N N 133 GLN C O doub N N 134 GLN C OXT sing N N 135 GLN CB CG sing N N 136 GLN CB HB2 sing N N 137 GLN CB HB3 sing N N 138 GLN CG CD sing N N 139 GLN CG HG2 sing N N 140 GLN CG HG3 sing N N 141 GLN CD OE1 doub N N 142 GLN CD NE2 sing N N 143 GLN NE2 HE21 sing N N 144 GLN NE2 HE22 sing N N 145 GLN OXT HXT sing N N 146 GLU N CA sing N N 147 GLU N H sing N N 148 GLU N H2 sing N N 149 GLU CA C sing N N 150 GLU CA CB sing N N 151 GLU CA HA sing N N 152 GLU C O doub N N 153 GLU C OXT sing N N 154 GLU CB CG sing N N 155 GLU CB HB2 sing N N 156 GLU CB HB3 sing N N 157 GLU CG CD sing N N 158 GLU CG HG2 sing N N 159 GLU CG HG3 sing N N 160 GLU CD OE1 doub N N 161 GLU CD OE2 sing N N 162 GLU OE2 HE2 sing N N 163 GLU OXT HXT sing N N 164 GLY N CA sing N N 165 GLY N H sing N N 166 GLY N H2 sing N N 167 GLY CA C sing N N 168 GLY CA HA2 sing N N 169 GLY CA HA3 sing N N 170 GLY C O doub N N 171 GLY C OXT sing N N 172 GLY OXT HXT sing N N 173 HIS N CA sing N N 174 HIS N H sing N N 175 HIS N H2 sing N N 176 HIS CA C sing N N 177 HIS CA CB sing N N 178 HIS CA HA sing N N 179 HIS C O doub N N 180 HIS C OXT sing N N 181 HIS CB CG sing N N 182 HIS CB HB2 sing N N 183 HIS CB HB3 sing N N 184 HIS CG ND1 sing Y N 185 HIS CG CD2 doub Y N 186 HIS ND1 CE1 doub Y N 187 HIS ND1 HD1 sing N N 188 HIS CD2 NE2 sing Y N 189 HIS CD2 HD2 sing N N 190 HIS CE1 NE2 sing Y N 191 HIS CE1 HE1 sing N N 192 HIS NE2 HE2 sing N N 193 HIS OXT HXT sing N N 194 HOH O H1 sing N N 195 HOH O H2 sing N N 196 ILE N CA sing N N 197 ILE N H sing N N 198 ILE N H2 sing N N 199 ILE CA C sing N N 200 ILE CA CB sing N N 201 ILE CA HA sing N N 202 ILE C O doub N N 203 ILE C OXT sing N N 204 ILE CB CG1 sing N N 205 ILE CB CG2 sing N N 206 ILE CB HB sing N N 207 ILE CG1 CD1 sing N N 208 ILE CG1 HG12 sing N N 209 ILE CG1 HG13 sing N N 210 ILE CG2 HG21 sing N N 211 ILE CG2 HG22 sing N N 212 ILE CG2 HG23 sing N N 213 ILE CD1 HD11 sing N N 214 ILE CD1 HD12 sing N N 215 ILE CD1 HD13 sing N N 216 ILE OXT HXT sing N N 217 LEU N CA sing N N 218 LEU N H sing N N 219 LEU N H2 sing N N 220 LEU CA C sing N N 221 LEU CA CB sing N N 222 LEU CA HA sing N N 223 LEU C O doub N N 224 LEU C OXT sing N N 225 LEU CB CG sing N N 226 LEU CB HB2 sing N N 227 LEU CB HB3 sing N N 228 LEU CG CD1 sing N N 229 LEU CG CD2 sing N N 230 LEU CG HG sing N N 231 LEU CD1 HD11 sing N N 232 LEU CD1 HD12 sing N N 233 LEU CD1 HD13 sing N N 234 LEU CD2 HD21 sing N N 235 LEU CD2 HD22 sing N N 236 LEU CD2 HD23 sing N N 237 LEU OXT HXT sing N N 238 LYS N CA sing N N 239 LYS N H sing N N 240 LYS N H2 sing N N 241 LYS CA C sing N N 242 LYS CA CB sing N N 243 LYS CA HA sing N N 244 LYS C O doub N N 245 LYS C OXT sing N N 246 LYS CB CG sing N N 247 LYS CB HB2 sing N N 248 LYS CB HB3 sing N N 249 LYS CG CD sing N N 250 LYS CG HG2 sing N N 251 LYS CG HG3 sing N N 252 LYS CD CE sing N N 253 LYS CD HD2 sing N N 254 LYS CD HD3 sing N N 255 LYS CE NZ sing N N 256 LYS CE HE2 sing N N 257 LYS CE HE3 sing N N 258 LYS NZ HZ1 sing N N 259 LYS NZ HZ2 sing N N 260 LYS NZ HZ3 sing N N 261 LYS OXT HXT sing N N 262 MET N CA sing N N 263 MET N H sing N N 264 MET N H2 sing N N 265 MET CA C sing N N 266 MET CA CB sing N N 267 MET CA HA sing N N 268 MET C O doub N N 269 MET C OXT sing N N 270 MET CB CG sing N N 271 MET CB HB2 sing N N 272 MET CB HB3 sing N N 273 MET CG SD sing N N 274 MET CG HG2 sing N N 275 MET CG HG3 sing N N 276 MET SD CE sing N N 277 MET CE HE1 sing N N 278 MET CE HE2 sing N N 279 MET CE HE3 sing N N 280 MET OXT HXT sing N N 281 PHE N CA sing N N 282 PHE N H sing N N 283 PHE N H2 sing N N 284 PHE CA C sing N N 285 PHE CA CB sing N N 286 PHE CA HA sing N N 287 PHE C O doub N N 288 PHE C OXT sing N N 289 PHE CB CG sing N N 290 PHE CB HB2 sing N N 291 PHE CB HB3 sing N N 292 PHE CG CD1 doub Y N 293 PHE CG CD2 sing Y N 294 PHE CD1 CE1 sing Y N 295 PHE CD1 HD1 sing N N 296 PHE CD2 CE2 doub Y N 297 PHE CD2 HD2 sing N N 298 PHE CE1 CZ doub Y N 299 PHE CE1 HE1 sing N N 300 PHE CE2 CZ sing Y N 301 PHE CE2 HE2 sing N N 302 PHE CZ HZ sing N N 303 PHE OXT HXT sing N N 304 PRO N CA sing N N 305 PRO N CD sing N N 306 PRO N H sing N N 307 PRO CA C sing N N 308 PRO CA CB sing N N 309 PRO CA HA sing N N 310 PRO C O doub N N 311 PRO C OXT sing N N 312 PRO CB CG sing N N 313 PRO CB HB2 sing N N 314 PRO CB HB3 sing N N 315 PRO CG CD sing N N 316 PRO CG HG2 sing N N 317 PRO CG HG3 sing N N 318 PRO CD HD2 sing N N 319 PRO CD HD3 sing N N 320 PRO OXT HXT sing N N 321 SER N CA sing N N 322 SER N H sing N N 323 SER N H2 sing N N 324 SER CA C sing N N 325 SER CA CB sing N N 326 SER CA HA sing N N 327 SER C O doub N N 328 SER C OXT sing N N 329 SER CB OG sing N N 330 SER CB HB2 sing N N 331 SER CB HB3 sing N N 332 SER OG HG sing N N 333 SER OXT HXT sing N N 334 THR N CA sing N N 335 THR N H sing N N 336 THR N H2 sing N N 337 THR CA C sing N N 338 THR CA CB sing N N 339 THR CA HA sing N N 340 THR C O doub N N 341 THR C OXT sing N N 342 THR CB OG1 sing N N 343 THR CB CG2 sing N N 344 THR CB HB sing N N 345 THR OG1 HG1 sing N N 346 THR CG2 HG21 sing N N 347 THR CG2 HG22 sing N N 348 THR CG2 HG23 sing N N 349 THR OXT HXT sing N N 350 TRP N CA sing N N 351 TRP N H sing N N 352 TRP N H2 sing N N 353 TRP CA C sing N N 354 TRP CA CB sing N N 355 TRP CA HA sing N N 356 TRP C O doub N N 357 TRP C OXT sing N N 358 TRP CB CG sing N N 359 TRP CB HB2 sing N N 360 TRP CB HB3 sing N N 361 TRP CG CD1 doub Y N 362 TRP CG CD2 sing Y N 363 TRP CD1 NE1 sing Y N 364 TRP CD1 HD1 sing N N 365 TRP CD2 CE2 doub Y N 366 TRP CD2 CE3 sing Y N 367 TRP NE1 CE2 sing Y N 368 TRP NE1 HE1 sing N N 369 TRP CE2 CZ2 sing Y N 370 TRP CE3 CZ3 doub Y N 371 TRP CE3 HE3 sing N N 372 TRP CZ2 CH2 doub Y N 373 TRP CZ2 HZ2 sing N N 374 TRP CZ3 CH2 sing Y N 375 TRP CZ3 HZ3 sing N N 376 TRP CH2 HH2 sing N N 377 TRP OXT HXT sing N N 378 TYR N CA sing N N 379 TYR N H sing N N 380 TYR N H2 sing N N 381 TYR CA C sing N N 382 TYR CA CB sing N N 383 TYR CA HA sing N N 384 TYR C O doub N N 385 TYR C OXT sing N N 386 TYR CB CG sing N N 387 TYR CB HB2 sing N N 388 TYR CB HB3 sing N N 389 TYR CG CD1 doub Y N 390 TYR CG CD2 sing Y N 391 TYR CD1 CE1 sing Y N 392 TYR CD1 HD1 sing N N 393 TYR CD2 CE2 doub Y N 394 TYR CD2 HD2 sing N N 395 TYR CE1 CZ doub Y N 396 TYR CE1 HE1 sing N N 397 TYR CE2 CZ sing Y N 398 TYR CE2 HE2 sing N N 399 TYR CZ OH sing N N 400 TYR OH HH sing N N 401 TYR OXT HXT sing N N 402 VAL N CA sing N N 403 VAL N H sing N N 404 VAL N H2 sing N N 405 VAL CA C sing N N 406 VAL CA CB sing N N 407 VAL CA HA sing N N 408 VAL C O doub N N 409 VAL C OXT sing N N 410 VAL CB CG1 sing N N 411 VAL CB CG2 sing N N 412 VAL CB HB sing N N 413 VAL CG1 HG11 sing N N 414 VAL CG1 HG12 sing N N 415 VAL CG1 HG13 sing N N 416 VAL CG2 HG21 sing N N 417 VAL CG2 HG22 sing N N 418 VAL CG2 HG23 sing N N 419 VAL OXT HXT sing N N 420 # _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'in silico model' _pdbx_initial_refinement_model.source_name Other _pdbx_initial_refinement_model.details 'homology based model' # _atom_sites.entry_id 2Q3H _atom_sites.fract_transf_matrix[1][1] 0.012185 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.006698 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018657 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.021082 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P S # loop_