HEADER PLANT PROTEIN 30-MAY-07 2Q3Q TITLE ENSEMBLE REFINEMENT OF THE PROTEIN CRYSTAL STRUCTURE OF AT1G24000 FROM TITLE 2 ARABIDOPSIS THALIANA COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN AT1G24000; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 3 ORGANISM_COMMON: THALE CRESS; SOURCE 4 ORGANISM_TAXID: 3702; SOURCE 5 STRAIN: CV. COLUMBIA; SOURCE 6 GENE: AT1G24000, T23E23.17; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: ROSETTA; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PVP13 KEYWDS PLANT PROTEIN, ENSEMBLE REFINEMENT, REFINEMENT METHODOLOGY KEYWDS 2 DEVELOPMENT, STRUCTURAL GENOMICS, PROTEIN STRUCTURE INITIATIVE, PSI, KEYWDS 3 CENTER FOR EUKARYOTIC STRUCTURAL GENOMICS, CESG EXPDTA X-RAY DIFFRACTION NUMMDL 16 AUTHOR E.J.LEVIN,D.A.KONDRASHOV,G.E.WESENBERG,G.N.PHILLIPS JR.,CENTER FOR AUTHOR 2 EUKARYOTIC STRUCTURAL GENOMICS (CESG) REVDAT 6 15-NOV-23 2Q3Q 1 REMARK REVDAT 5 30-AUG-23 2Q3Q 1 SEQADV LINK REVDAT 4 10-AUG-11 2Q3Q 1 REMARK REVDAT 3 24-FEB-09 2Q3Q 1 VERSN REVDAT 2 02-OCT-07 2Q3Q 1 JRNL REVDAT 1 19-JUN-07 2Q3Q 0 JRNL AUTH E.J.LEVIN,D.A.KONDRASHOV,G.E.WESENBERG,G.N.PHILLIPS JRNL TITL ENSEMBLE REFINEMENT OF PROTEIN CRYSTAL STRUCTURES: JRNL TITL 2 VALIDATION AND APPLICATION. JRNL REF STRUCTURE V. 15 1040 2007 JRNL REFN ISSN 0969-2126 JRNL PMID 17850744 JRNL DOI 10.1016/J.STR.2007.06.019 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD USING AMPLITUDES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.81 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 1003290.062 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 14520 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.174 REMARK 3 FREE R VALUE : 0.241 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 732 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.009 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.23 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.60 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2256 REMARK 3 BIN R VALUE (WORKING SET) : 0.1190 REMARK 3 BIN FREE R VALUE : 0.2300 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.30 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 127 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.020 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1904 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 106 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.18 REMARK 3 ESD FROM SIGMAA (A) : -0.1 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.27 REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 1.400 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 23.30 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.830 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.380 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.000 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 1.870 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 2.400 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.38 REMARK 3 BSOL : 60.19 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 THIS PDB ENTRY IS A RE-REFINEMENT USING AN ENSEMBLE MODEL OF THE REMARK 3 PREVIOUSLY REMARK 3 DEPOSITED SINGLE-CONFORMER STRUCTURE 1VJH AND REMARK 3 THE FIRST DATA SET IN THE DEPOSITED STRUCTURE FACTOR FILE REMARK 3 FOR 1VJH ALONG WITH THE R-FREE SET DEFINED THEREIN. THE COORDINATES REMARK 3 WERE GENERATED BY AN AUTOMATED PROTOCOL FROM AN INITIAL MODEL REMARK 3 CONSISTING REMARK 3 OF 1 IDENTICAL COPIES OF THE PROTEIN AND NON-WATER REMARK 3 HETERO-ATOMS ASSIGNED FRACTIONAL OCCUPANCIES ADDING UP TO ONE, AND REMARK 3 A REMARK 3 SINGLE COPY OF THE SOLVENT MOLECULES. REFINEMENT WAS CARRIED OUT REMARK 3 WITH REMARK 3 ALL THE CONFORMERS PRESENT SIMULTANEOUSLY AND WITH THE POTENTIAL REMARK 3 ENERGY REMARK 3 TERMS CORRESPONDING TO INTERACTIONS BETWEEN THE DIFFERENT REMARK 3 CONFORMERS REMARK 3 EXCLUDED. THE HELIX AND SHEET RECORDS WERE CALCULATED USING REMARK 3 COORDINATES REMARK 3 FROM THE FIRST CONFORMER ONLY. THE STRUCTURE VISUALIZATION PROGRAM REMARK 3 PYMOL IS WELL-SUITED FOR DIRECTLY VIEWING THE ENSEMBLE MODEL REMARK 3 PRESENTED IN THIS PDB FILE. REMARK 4 REMARK 4 2Q3Q COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 31-MAY-07. REMARK 100 THE DEPOSITION ID IS D_1000043110. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: RE-REFINEMENT USING REMARK 200 ENSEMBLE MODEL REMARK 200 SOFTWARE USED: CNS 1.1 REMARK 200 STARTING MODEL: PDB ENTRY 1VJH REMARK 200 REMARK 200 REMARK: AUTHOR USED THE SF DATA FROM ENTRY 1VJH. REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.49 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.22 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1,2 REMARK 300 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT REMARK 300 WHICH CONSISTS OF 2 CHAIN(S). AUTHORS STATE THAT THE REMARK 300 BIOLOGICAL UNIT OF THIS PROTEIN IS UNKNOWN. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 166 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 1 LYS A 121 REMARK 465 1 GLU A 122 REMARK 465 1 LYS B 121 REMARK 465 1 GLU B 122 REMARK 465 2 LYS A 121 REMARK 465 2 GLU A 122 REMARK 465 2 LYS B 121 REMARK 465 2 GLU B 122 REMARK 465 3 LYS A 121 REMARK 465 3 GLU A 122 REMARK 465 3 LYS B 121 REMARK 465 3 GLU B 122 REMARK 465 4 LYS A 121 REMARK 465 4 GLU A 122 REMARK 465 4 LYS B 121 REMARK 465 4 GLU B 122 REMARK 465 5 LYS A 121 REMARK 465 5 GLU A 122 REMARK 465 5 LYS B 121 REMARK 465 5 GLU B 122 REMARK 465 6 LYS A 121 REMARK 465 6 GLU A 122 REMARK 465 6 LYS B 121 REMARK 465 6 GLU B 122 REMARK 465 7 LYS A 121 REMARK 465 7 GLU A 122 REMARK 465 7 LYS B 121 REMARK 465 7 GLU B 122 REMARK 465 8 LYS A 121 REMARK 465 8 GLU A 122 REMARK 465 8 LYS B 121 REMARK 465 8 GLU B 122 REMARK 465 9 LYS A 121 REMARK 465 9 GLU A 122 REMARK 465 9 LYS B 121 REMARK 465 9 GLU B 122 REMARK 465 10 LYS A 121 REMARK 465 10 GLU A 122 REMARK 465 10 LYS B 121 REMARK 465 10 GLU B 122 REMARK 465 11 LYS A 121 REMARK 465 11 GLU A 122 REMARK 465 11 LYS B 121 REMARK 465 11 GLU B 122 REMARK 465 12 LYS A 121 REMARK 465 12 GLU A 122 REMARK 465 12 LYS B 121 REMARK 465 12 GLU B 122 REMARK 465 13 LYS A 121 REMARK 465 13 GLU A 122 REMARK 465 13 LYS B 121 REMARK 465 13 GLU B 122 REMARK 465 14 LYS A 121 REMARK 465 14 GLU A 122 REMARK 465 14 LYS B 121 REMARK 465 14 GLU B 122 REMARK 465 15 LYS A 121 REMARK 465 15 GLU A 122 REMARK 465 15 LYS B 121 REMARK 465 15 GLU B 122 REMARK 465 16 LYS A 121 REMARK 465 16 GLU A 122 REMARK 465 16 LYS B 121 REMARK 465 16 GLU B 122 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASN A 35 32.35 -92.92 REMARK 500 1 GLU A 58 -65.44 -93.26 REMARK 500 1 TYR A 62 -39.71 -130.65 REMARK 500 1 ILE A 75 -81.30 -83.50 REMARK 500 1 HIS A 88 97.45 -27.72 REMARK 500 1 PRO A 99 43.66 -61.37 REMARK 500 1 ASN B 35 61.30 -112.02 REMARK 500 1 VAL B 77 61.79 -116.42 REMARK 500 1 PRO B 99 43.44 -52.88 REMARK 500 1 SER B 101 -74.80 -60.07 REMARK 500 2 ALA A 17 -87.48 -39.47 REMARK 500 2 ALA A 42 140.16 -177.67 REMARK 500 2 MSE A 50 157.07 176.65 REMARK 500 2 THR A 51 56.75 -147.54 REMARK 500 2 ILE A 52 160.96 -40.69 REMARK 500 2 PRO A 99 46.91 -58.34 REMARK 500 2 ASN B 35 53.00 -115.92 REMARK 500 2 ALA B 42 116.20 151.91 REMARK 500 2 GLN B 60 1.73 -63.44 REMARK 500 2 ILE B 75 -83.84 -90.66 REMARK 500 2 ASN B 119 30.81 -88.86 REMARK 500 3 GLU A 33 159.91 175.78 REMARK 500 3 ASN A 35 59.42 -92.21 REMARK 500 3 LYS A 37 54.21 -156.00 REMARK 500 3 THR A 38 161.60 -46.98 REMARK 500 3 GLU A 41 -95.52 -81.31 REMARK 500 3 VAL A 43 122.08 -171.86 REMARK 500 3 MSE B 50 141.83 -172.56 REMARK 500 3 TYR B 62 -39.61 -131.66 REMARK 500 3 VAL B 77 78.77 -119.94 REMARK 500 3 PRO B 99 46.36 -63.85 REMARK 500 4 GLU A 33 149.43 172.88 REMARK 500 4 MSE A 50 143.04 -172.77 REMARK 500 4 LYS A 94 -19.44 -49.68 REMARK 500 4 PRO A 99 42.81 -62.45 REMARK 500 4 GLU B 58 -73.03 -52.18 REMARK 500 4 VAL B 77 57.05 -107.28 REMARK 500 4 ASP B 79 17.23 -60.48 REMARK 500 4 ILE B 96 127.26 -39.18 REMARK 500 4 ALA B 116 -85.02 -57.72 REMARK 500 5 ALA A 17 -83.17 -41.51 REMARK 500 5 MSE A 50 142.56 -174.40 REMARK 500 5 ALA A 71 113.93 -162.80 REMARK 500 5 PRO A 99 35.34 -51.35 REMARK 500 5 ASN B 35 66.65 -113.37 REMARK 500 5 GLU B 58 -70.34 -58.01 REMARK 500 5 TYR B 62 -40.00 -134.40 REMARK 500 5 VAL B 77 69.46 -111.39 REMARK 500 5 PRO B 99 42.59 -60.85 REMARK 500 6 ALA A 42 136.50 179.77 REMARK 500 REMARK 500 THIS ENTRY HAS 181 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: GO.5358 RELATED DB: TARGETDB REMARK 900 RELATED ID: 1VJH RELATED DB: PDB REMARK 900 ORIGINAL REFINEMENT BASED ON SAME DATA AND R-FREE SET. DBREF 2Q3Q A 2 122 UNP P0C0B0 Y1400_ARATH 2 122 DBREF 2Q3Q B 2 122 UNP P0C0B0 Y1400_ARATH 2 122 SEQADV 2Q3Q SER A 1 UNP P0C0B0 EXPRESSION TAG SEQADV 2Q3Q MSE A 50 UNP P0C0B0 MET 50 MODIFIED RESIDUE SEQADV 2Q3Q MSE A 54 UNP P0C0B0 MET 54 MODIFIED RESIDUE SEQADV 2Q3Q SER B 1 UNP P0C0B0 EXPRESSION TAG SEQADV 2Q3Q MSE B 50 UNP P0C0B0 MET 50 MODIFIED RESIDUE SEQADV 2Q3Q MSE B 54 UNP P0C0B0 MET 54 MODIFIED RESIDUE SEQRES 1 A 122 SER THR LEU LYS GLY ALA LEU SER VAL LYS PHE ASP VAL SEQRES 2 A 122 LYS CYS PRO ALA ASP LYS PHE PHE SER ALA PHE VAL GLU SEQRES 3 A 122 ASP THR ASN ARG PRO PHE GLU LYS ASN GLY LYS THR GLU SEQRES 4 A 122 ILE GLU ALA VAL ASP LEU VAL LYS LYS THR MSE THR ILE SEQRES 5 A 122 GLN MSE SER GLY SER GLU ILE GLN LYS TYR PHE LYS THR SEQRES 6 A 122 LEU LYS GLY SER ILE ALA VAL THR PRO ILE GLY VAL GLY SEQRES 7 A 122 ASP GLY SER HIS VAL VAL TRP THR PHE HIS PHE GLU LYS SEQRES 8 A 122 VAL HIS LYS ASP ILE ASP ASP PRO HIS SER ILE ILE ASP SEQRES 9 A 122 GLU SER VAL LYS TYR PHE LYS LYS LEU ASP GLU ALA ILE SEQRES 10 A 122 LEU ASN PHE LYS GLU SEQRES 1 B 122 SER THR LEU LYS GLY ALA LEU SER VAL LYS PHE ASP VAL SEQRES 2 B 122 LYS CYS PRO ALA ASP LYS PHE PHE SER ALA PHE VAL GLU SEQRES 3 B 122 ASP THR ASN ARG PRO PHE GLU LYS ASN GLY LYS THR GLU SEQRES 4 B 122 ILE GLU ALA VAL ASP LEU VAL LYS LYS THR MSE THR ILE SEQRES 5 B 122 GLN MSE SER GLY SER GLU ILE GLN LYS TYR PHE LYS THR SEQRES 6 B 122 LEU LYS GLY SER ILE ALA VAL THR PRO ILE GLY VAL GLY SEQRES 7 B 122 ASP GLY SER HIS VAL VAL TRP THR PHE HIS PHE GLU LYS SEQRES 8 B 122 VAL HIS LYS ASP ILE ASP ASP PRO HIS SER ILE ILE ASP SEQRES 9 B 122 GLU SER VAL LYS TYR PHE LYS LYS LEU ASP GLU ALA ILE SEQRES 10 B 122 LEU ASN PHE LYS GLU MODRES 2Q3Q MSE A 50 MET SELENOMETHIONINE MODRES 2Q3Q MSE A 54 MET SELENOMETHIONINE MODRES 2Q3Q MSE B 50 MET SELENOMETHIONINE MODRES 2Q3Q MSE B 54 MET SELENOMETHIONINE HET MSE A 50 8 HET MSE A 54 8 HET MSE B 50 8 HET MSE B 54 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 4(C5 H11 N O2 SE) FORMUL 3 HOH *106(H2 O) HELIX 1 1 PRO A 16 THR A 28 1 13 HELIX 2 2 GLU A 58 LYS A 61 5 4 HELIX 3 3 PRO A 99 ASN A 119 1 21 HELIX 4 4 PRO B 16 THR B 28 1 13 HELIX 5 5 GLU B 58 TYR B 62 1 5 HELIX 6 6 PRO B 99 ASN B 119 1 21 SHEET 1 A 5 LYS A 4 GLY A 5 0 SHEET 2 A 5 PHE A 89 LYS A 91 -1 O PHE A 89 N GLY A 5 SHEET 3 A 5 PHE A 63 PRO A 74 -1 N THR A 65 O GLU A 90 SHEET 4 A 5 SER A 81 THR A 86 -1 O HIS A 82 N THR A 73 SHEET 5 A 5 SER A 8 VAL A 13 -1 N VAL A 13 O SER A 81 SHEET 1 B 5 LYS A 4 GLY A 5 0 SHEET 2 B 5 PHE A 89 LYS A 91 -1 O PHE A 89 N GLY A 5 SHEET 3 B 5 PHE A 63 PRO A 74 -1 N THR A 65 O GLU A 90 SHEET 4 B 5 THR A 49 SER A 55 -1 N MSE A 50 O ILE A 70 SHEET 5 B 5 LYS A 37 ASP A 44 -1 N LYS A 37 O SER A 55 SHEET 1 C 5 LYS B 4 VAL B 13 0 SHEET 2 C 5 SER B 81 LYS B 91 -1 O PHE B 87 N LEU B 7 SHEET 3 C 5 PHE B 63 PRO B 74 -1 N ALA B 71 O VAL B 84 SHEET 4 C 5 THR B 49 GLY B 56 -1 N MSE B 50 O ILE B 70 SHEET 5 C 5 GLY B 36 ASP B 44 -1 N ALA B 42 O THR B 51 LINK C THR A 49 N MSE A 50 1555 1555 1.33 LINK C MSE A 50 N THR A 51 1555 1555 1.33 LINK C GLN A 53 N MSE A 54 1555 1555 1.33 LINK C MSE A 54 N SER A 55 1555 1555 1.33 LINK C THR B 49 N MSE B 50 1555 1555 1.33 LINK C MSE B 50 N THR B 51 1555 1555 1.34 LINK C GLN B 53 N MSE B 54 1555 1555 1.33 LINK C MSE B 54 N SER B 55 1555 1555 1.33 CRYST1 45.681 34.261 78.597 90.00 90.01 90.00 P 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021891 0.000000 0.000004 0.00000 SCALE2 0.000000 0.029188 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012723 0.00000 MODEL 1