HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 31-MAY-07 2Q47 TITLE ENSEMBLE REFINEMENT OF THE PROTEIN CRYSTAL STRUCTURE OF A PUTATIVE TITLE 2 PHOSPHOPROTEIN PHOSPHATASE FROM ARABIDOPSIS THALIANA GENE AT1G05000 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROBABLE TYROSINE-PROTEIN PHOSPHATASE AT1G05000; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RESIDUES 52-202; COMPND 5 EC: 3.1.3.48; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 3 ORGANISM_COMMON: THALE CRESS; SOURCE 4 ORGANISM_TAXID: 3702; SOURCE 5 STRAIN: CV. COLUMBIA; SOURCE 6 GENE: AT1G05000, T7A14.14; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: B834(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PVP-13; SOURCE 12 OTHER_DETAILS: PQE DERIVATIVE KEYWDS ENSEMBLE REFINEMENT, REFINEMENT METHODOLOGY DEVELOPMENT, AT1G05000, KEYWDS 2 PHOSPHOPROTEIN PHOSPHATASE, STRUCTURAL GENOMICS, PROTEIN STRUCTURE KEYWDS 3 INITIATIVE, PSI, CENTER FOR EUKARYOTIC STRUCTURAL GENOMICS, CESG, KEYWDS 4 UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION NUMMDL 16 AUTHOR E.J.LEVIN,D.A.KONDRASHOV,G.E.WESENBERG,G.N.PHILLIPS JR.,CENTER FOR AUTHOR 2 EUKARYOTIC STRUCTURAL GENOMICS (CESG) REVDAT 8 30-OCT-24 2Q47 1 REMARK REVDAT 7 15-NOV-23 2Q47 1 REMARK REVDAT 6 30-AUG-23 2Q47 1 REMARK SEQADV LINK REVDAT 5 10-AUG-11 2Q47 1 REMARK REVDAT 4 13-JUL-11 2Q47 1 VERSN REVDAT 3 24-FEB-09 2Q47 1 VERSN REVDAT 2 02-OCT-07 2Q47 1 JRNL REVDAT 1 19-JUN-07 2Q47 0 JRNL AUTH E.J.LEVIN,D.A.KONDRASHOV,G.E.WESENBERG,G.N.PHILLIPS JRNL TITL ENSEMBLE REFINEMENT OF PROTEIN CRYSTAL STRUCTURES: JRNL TITL 2 VALIDATION AND APPLICATION. JRNL REF STRUCTURE V. 15 1040 2007 JRNL REFN ISSN 0969-2126 JRNL PMID 17850744 JRNL DOI 10.1016/J.STR.2007.06.019 REMARK 2 REMARK 2 RESOLUTION. 3.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD USING AMPLITUDES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.50 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 150641.594 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 9847 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.160 REMARK 3 FREE R VALUE : 0.234 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.500 REMARK 3 FREE R VALUE TEST SET COUNT : 937 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.008 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.51 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.30 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 1442 REMARK 3 BIN R VALUE (WORKING SET) : 0.2020 REMARK 3 BIN FREE R VALUE : 0.2960 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 10.20 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 164 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.023 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2448 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 20 REMARK 3 SOLVENT ATOMS : 60 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.40 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.22 REMARK 3 ESD FROM SIGMAA (A) : 0.27 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.36 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.48 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.006 REMARK 3 BOND ANGLES (DEGREES) : 1.200 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 21.20 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.900 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.600 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.780 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 1.920 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.080 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.36 REMARK 3 BSOL : 29.07 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 THIS PDB ENTRY IS A RE-REFINEMENT USING AN ENSEMBLE MODEL OF THE REMARK 3 PREVIOUSLY REMARK 3 DEPOSITED SINGLE-CONFORMER STRUCTURE 1XRI AND REMARK 3 THE FIRST DATA SET IN THE DEPOSITED STRUCTURE FACTOR FILE REMARK 3 FOR 1XRI ALONG WITH THE R-FREE SET DEFINED THEREIN. THE COORDINATES REMARK 3 WERE GENERATED BY AN AUTOMATED PROTOCOL FROM AN INITIAL MODEL REMARK 3 CONSISTING REMARK 3 OF 16 IDENTICAL COPIES OF THE PROTEIN AND NON-WATER REMARK 3 HETERO-ATOMS ASSIGNED FRACTIONAL OCCUPANCIES ADDING UP TO ONE, AND REMARK 3 A REMARK 3 SINGLE COPY OF THE SOLVENT MOLECULES. REFINEMENT WAS CARRIED OUT REMARK 3 WITH REMARK 3 ALL THE CONFORMERS PRESENT SIMULTANEOUSLY AND WITH THE POTENTIAL REMARK 3 ENERGY REMARK 3 TERMS CORRESPONDING TO INTERACTIONS BETWEEN THE DIFFERENT REMARK 3 CONFORMERS REMARK 3 EXCLUDED. THE HELIX AND SHEET RECORDS WERE CALCULATED USING REMARK 3 COORDINATES REMARK 3 FROM THE FIRST CONFORMER ONLY. THE STRUCTURE VISUALIZATION PROGRAM REMARK 3 PYMOL IS WELL-SUITED FOR DIRECTLY VIEWING THE ENSEMBLE MODEL REMARK 3 PRESENTED IN THIS PDB FILE. REMARK 4 REMARK 4 2Q47 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-JUN-07. REMARK 100 THE DEPOSITION ID IS D_1000043127. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : APS-1 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: RE-REFINEMENT USING REMARK 200 ENSEMBLE MODEL REMARK 200 SOFTWARE USED: CNS 1.1 REMARK 200 STARTING MODEL: PDB ENTRY 1XRI REMARK 200 REMARK 200 REMARK: AUTHOR USED THE SF DATA FROM ENTRY 1XRI. REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 73.14 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.58 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 62.24150 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 62.24150 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 62.24150 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 62.24150 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 62.24150 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 62.24150 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 62.24150 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 62.24150 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 62.24150 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 62.24150 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 62.24150 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 62.24150 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 62.24150 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 62.24150 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 62.24150 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 62.24150 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 62.24150 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 62.24150 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 2470 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14530 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -82.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 13580 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 37430 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -286.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 -1.000000 62.24150 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 1.000000 0.000000 62.24150 REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 0.000000 1.000000 -62.24150 REMARK 350 BIOMT3 3 -1.000000 0.000000 0.000000 62.24150 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASN A 58 28.89 47.83 REMARK 500 1 VAL A 62 -96.60 -59.75 REMARK 500 1 ASP A 63 -156.56 -103.52 REMARK 500 1 ASN A 64 -75.88 -46.98 REMARK 500 1 GLN A 81 39.52 -71.10 REMARK 500 1 THR A 82 -25.58 -145.48 REMARK 500 1 LEU A 91 34.72 -87.63 REMARK 500 1 LYS A 105 -70.34 -58.59 REMARK 500 1 SER A 106 48.05 -60.11 REMARK 500 1 ASN A 107 11.93 -154.92 REMARK 500 1 VAL A 124 -165.85 -117.93 REMARK 500 1 ASN A 125 112.59 171.01 REMARK 500 1 CYS A 150 -124.54 -139.21 REMARK 500 1 LYS A 151 -68.42 -94.87 REMARK 500 1 HIS A 155 -71.66 -96.43 REMARK 500 1 THR A 157 -8.44 -58.32 REMARK 500 1 ALA A 183 -18.52 -43.68 REMARK 500 1 ALA A 184 -116.03 36.15 REMARK 500 1 ALA A 185 -80.80 -42.85 REMARK 500 1 SER A 201 -96.75 -86.90 REMARK 500 1 SER B 60 138.36 -178.87 REMARK 500 1 SER B 69 -174.85 -179.79 REMARK 500 1 PHE B 77 -57.58 -28.82 REMARK 500 1 PRO B 97 -167.44 -65.54 REMARK 500 1 ASN B 125 104.77 -175.56 REMARK 500 1 LYS B 130 -9.29 -54.74 REMARK 500 1 LEU B 147 92.73 173.90 REMARK 500 1 CYS B 150 -139.35 -133.94 REMARK 500 1 HIS B 155 -82.39 -89.56 REMARK 500 1 GLN B 168 7.75 -58.80 REMARK 500 1 TRP B 170 -131.16 -81.65 REMARK 500 1 ARG B 181 20.46 -64.42 REMARK 500 1 PHE B 182 -28.93 -150.30 REMARK 500 1 ALA B 184 -141.04 61.43 REMARK 500 1 ALA B 185 5.72 -55.10 REMARK 500 1 PHE B 198 124.38 -22.88 REMARK 500 1 VAL B 200 49.70 -106.45 REMARK 500 2 PRO A 55 153.15 -48.05 REMARK 500 2 ASP A 63 -157.07 -174.78 REMARK 500 2 SER A 69 -161.66 173.12 REMARK 500 2 SER A 74 -62.78 -25.87 REMARK 500 2 GLU A 94 157.28 -48.70 REMARK 500 2 LYS A 142 -9.43 -56.58 REMARK 500 2 CYS A 150 -161.27 -126.08 REMARK 500 2 ARG A 152 -54.91 -122.84 REMARK 500 2 HIS A 155 -90.92 -144.48 REMARK 500 2 LEU A 172 -35.57 -37.99 REMARK 500 2 GLN A 180 21.51 -72.28 REMARK 500 2 ALA A 184 -130.36 51.20 REMARK 500 2 PHE A 198 114.28 -38.33 REMARK 500 REMARK 500 THIS ENTRY HAS 624 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 204 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: GO.605 RELATED DB: TARGETDB REMARK 900 RELATED ID: 1XRI RELATED DB: PDB REMARK 900 ORIGINAL REFINEMENT BASED ON SAME DATA AND R-FREE SET. DBREF 2Q47 A 52 202 UNP Q9ZVN4 Y1500_ARATH 52 202 DBREF 2Q47 B 52 202 UNP Q9ZVN4 Y1500_ARATH 52 202 SEQADV 2Q47 MSE A 61 UNP Q9ZVN4 MET 61 MODIFIED RESIDUE SEQADV 2Q47 MSE A 133 UNP Q9ZVN4 MET 133 MODIFIED RESIDUE SEQADV 2Q47 MSE A 195 UNP Q9ZVN4 MET 195 MODIFIED RESIDUE SEQADV 2Q47 MSE B 61 UNP Q9ZVN4 MET 61 MODIFIED RESIDUE SEQADV 2Q47 MSE B 133 UNP Q9ZVN4 MET 133 MODIFIED RESIDUE SEQADV 2Q47 MSE B 195 UNP Q9ZVN4 MET 195 MODIFIED RESIDUE SEQRES 1 A 151 HIS LEU ILE PRO PRO LEU ASN PHE SER MSE VAL ASP ASN SEQRES 2 A 151 GLY ILE PHE ARG SER GLY PHE PRO ASP SER ALA ASN PHE SEQRES 3 A 151 SER PHE LEU GLN THR LEU GLY LEU ARG SER ILE ILE TYR SEQRES 4 A 151 LEU CYS PRO GLU PRO TYR PRO GLU SER ASN LEU GLN PHE SEQRES 5 A 151 LEU LYS SER ASN GLY ILE ARG LEU PHE GLN PHE GLY ILE SEQRES 6 A 151 GLU GLY ASN LYS GLU PRO PHE VAL ASN ILE PRO ASP HIS SEQRES 7 A 151 LYS ILE ARG MSE ALA LEU LYS VAL LEU LEU ASP GLU LYS SEQRES 8 A 151 ASN HIS PRO VAL LEU ILE HIS CYS LYS ARG GLY LYS HIS SEQRES 9 A 151 ARG THR GLY CYS LEU VAL GLY CYS LEU ARG LYS LEU GLN SEQRES 10 A 151 LYS TRP CYS LEU THR SER ILE PHE ASP GLU TYR GLN ARG SEQRES 11 A 151 PHE ALA ALA ALA LYS ALA ARG VAL SER ASP GLN ARG PHE SEQRES 12 A 151 MSE GLU ILE PHE ASP VAL SER SER SEQRES 1 B 151 HIS LEU ILE PRO PRO LEU ASN PHE SER MSE VAL ASP ASN SEQRES 2 B 151 GLY ILE PHE ARG SER GLY PHE PRO ASP SER ALA ASN PHE SEQRES 3 B 151 SER PHE LEU GLN THR LEU GLY LEU ARG SER ILE ILE TYR SEQRES 4 B 151 LEU CYS PRO GLU PRO TYR PRO GLU SER ASN LEU GLN PHE SEQRES 5 B 151 LEU LYS SER ASN GLY ILE ARG LEU PHE GLN PHE GLY ILE SEQRES 6 B 151 GLU GLY ASN LYS GLU PRO PHE VAL ASN ILE PRO ASP HIS SEQRES 7 B 151 LYS ILE ARG MSE ALA LEU LYS VAL LEU LEU ASP GLU LYS SEQRES 8 B 151 ASN HIS PRO VAL LEU ILE HIS CYS LYS ARG GLY LYS HIS SEQRES 9 B 151 ARG THR GLY CYS LEU VAL GLY CYS LEU ARG LYS LEU GLN SEQRES 10 B 151 LYS TRP CYS LEU THR SER ILE PHE ASP GLU TYR GLN ARG SEQRES 11 B 151 PHE ALA ALA ALA LYS ALA ARG VAL SER ASP GLN ARG PHE SEQRES 12 B 151 MSE GLU ILE PHE ASP VAL SER SER MODRES 2Q47 MSE A 61 MET SELENOMETHIONINE MODRES 2Q47 MSE A 133 MET SELENOMETHIONINE MODRES 2Q47 MSE A 195 MET SELENOMETHIONINE MODRES 2Q47 MSE B 61 MET SELENOMETHIONINE MODRES 2Q47 MSE B 133 MET SELENOMETHIONINE MODRES 2Q47 MSE B 195 MET SELENOMETHIONINE HET MSE A 61 8 HET MSE A 133 8 HET MSE A 195 8 HET MSE B 61 8 HET MSE B 133 8 HET MSE B 195 8 HET SO4 A 203 5 HET SO4 A 204 5 HET SO4 B 203 5 HET SO4 B 204 5 HETNAM MSE SELENOMETHIONINE HETNAM SO4 SULFATE ION FORMUL 1 MSE 6(C5 H11 N O2 SE) FORMUL 3 SO4 4(O4 S 2-) FORMUL 7 HOH *60(H2 O) HELIX 1 1 ASP A 73 ALA A 75 5 3 HELIX 2 2 ASN A 76 GLN A 81 1 6 HELIX 3 3 PRO A 97 SER A 106 1 10 HELIX 4 4 PRO A 127 LEU A 139 1 13 HELIX 5 5 ASP A 140 HIS A 144 5 5 HELIX 6 6 HIS A 155 GLN A 168 1 14 HELIX 7 7 CYS A 171 ALA A 184 1 14 HELIX 8 8 VAL A 189 ILE A 197 1 9 HELIX 9 9 ASN B 76 GLY B 84 1 9 HELIX 10 10 PRO B 97 ASN B 107 1 11 HELIX 11 11 LYS B 120 VAL B 124 5 5 HELIX 12 12 PRO B 127 ASP B 140 1 14 HELIX 13 13 HIS B 155 GLN B 168 1 14 HELIX 14 14 CYS B 171 ALA B 184 1 14 HELIX 15 15 ALA B 185 ALA B 187 5 3 HELIX 16 16 ARG B 188 PHE B 198 1 11 SHEET 1 A 5 SER A 60 MSE A 61 0 SHEET 2 A 5 ILE A 66 SER A 69 -1 O ARG A 68 N SER A 60 SHEET 3 A 5 VAL A 146 HIS A 149 1 O ILE A 148 N PHE A 67 SHEET 4 A 5 SER A 87 TYR A 90 1 N ILE A 89 O HIS A 149 SHEET 5 A 5 ARG A 110 PHE A 112 1 O ARG A 110 N ILE A 88 SHEET 1 B 2 SER B 60 ASP B 63 0 SHEET 2 B 2 ILE B 66 ARG B 68 -1 O ARG B 68 N SER B 60 SHEET 1 C 2 SER B 87 TYR B 90 0 SHEET 2 C 2 ARG B 110 GLN B 113 1 O PHE B 112 N TYR B 90 LINK C SER A 60 N MSE A 61 1555 1555 1.33 LINK C MSE A 61 N VAL A 62 1555 1555 1.33 LINK C ARG A 132 N MSE A 133 1555 1555 1.33 LINK C MSE A 133 N ALA A 134 1555 1555 1.33 LINK C PHE A 194 N MSE A 195 1555 1555 1.33 LINK C MSE A 195 N GLU A 196 1555 1555 1.33 LINK C SER B 60 N MSE B 61 1555 1555 1.33 LINK C MSE B 61 N VAL B 62 1555 1555 1.33 LINK C ARG B 132 N MSE B 133 1555 1555 1.33 LINK C MSE B 133 N ALA B 134 1555 1555 1.33 LINK C PHE B 194 N MSE B 195 1555 1555 1.33 LINK C MSE B 195 N GLU B 196 1555 1555 1.33 CISPEP 1 HIS A 144 PRO A 145 1 -0.19 CISPEP 2 HIS B 144 PRO B 145 1 -0.49 CISPEP 3 HIS A 144 PRO A 145 2 0.14 CISPEP 4 HIS B 144 PRO B 145 2 0.06 CISPEP 5 HIS A 144 PRO A 145 3 0.02 CISPEP 6 HIS B 144 PRO B 145 3 0.13 CISPEP 7 HIS A 144 PRO A 145 4 0.22 CISPEP 8 HIS B 144 PRO B 145 4 0.74 CISPEP 9 HIS A 144 PRO A 145 5 -0.21 CISPEP 10 HIS B 144 PRO B 145 5 0.10 CISPEP 11 HIS A 144 PRO A 145 6 0.02 CISPEP 12 HIS B 144 PRO B 145 6 -0.47 CISPEP 13 HIS A 144 PRO A 145 7 -0.88 CISPEP 14 HIS B 144 PRO B 145 7 0.53 CISPEP 15 HIS A 144 PRO A 145 8 0.07 CISPEP 16 HIS B 144 PRO B 145 8 -0.02 CISPEP 17 HIS A 144 PRO A 145 9 -0.01 CISPEP 18 HIS B 144 PRO B 145 9 0.03 CISPEP 19 HIS A 144 PRO A 145 10 -1.85 CISPEP 20 HIS B 144 PRO B 145 10 0.12 CISPEP 21 HIS A 144 PRO A 145 11 -0.50 CISPEP 22 HIS B 144 PRO B 145 11 0.30 CISPEP 23 HIS A 144 PRO A 145 12 0.43 CISPEP 24 HIS B 144 PRO B 145 12 -1.15 CISPEP 25 HIS A 144 PRO A 145 13 0.17 CISPEP 26 HIS B 144 PRO B 145 13 -1.94 CISPEP 27 HIS A 144 PRO A 145 14 -0.17 CISPEP 28 HIS B 144 PRO B 145 14 0.19 CISPEP 29 HIS A 144 PRO A 145 15 0.05 CISPEP 30 HIS B 144 PRO B 145 15 0.50 CISPEP 31 HIS A 144 PRO A 145 16 0.30 CISPEP 32 HIS B 144 PRO B 145 16 3.04 SITE 1 AC1 7 CYS A 150 LYS A 151 ARG A 152 GLY A 153 SITE 2 AC1 7 LYS A 154 HIS A 155 ARG A 156 SITE 1 AC2 4 GLU A 94 GLY A 118 LYS A 151 ARG A 152 SITE 1 AC3 7 CYS B 150 LYS B 151 ARG B 152 GLY B 153 SITE 2 AC3 7 LYS B 154 HIS B 155 ARG B 156 SITE 1 AC4 4 GLY B 118 LYS B 151 ARG B 152 ARG B 156 CRYST1 124.483 124.483 124.483 90.00 90.00 90.00 P 21 3 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008033 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008033 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008033 0.00000 MODEL 1