HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 31-MAY-07 2Q4Q TITLE ENSEMBLE REFINEMENT OF THE PROTEIN CRYSTAL STRUCTURE OF GENE PRODUCT TITLE 2 FROM HOMO SAPIENS HS.95870 COMPND MOL_ID: 1; COMPND 2 MOLECULE: UPF0366 PROTEIN C11ORF67; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: C11ORF67, PTD015, HS.503357; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: B834 P(RARE2); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PVP16 KEYWDS ENSEMBLE REFINEMENT, REFINEMENT METHODOLOGY DEVELOPMENT, HS.95870, KEYWDS 2 DUF498, STRUCTURAL GENOMICS, PROTEIN STRUCTURE INITIATIVE, PSI, KEYWDS 3 CENTER FOR EUKARYOTIC STRUCTURAL GENOMICS, CESG, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION NUMMDL 16 AUTHOR E.J.LEVIN,D.A.KONDRASHOV,G.E.WESENBERG,G.N.PHILLIPS JR.,CENTER FOR AUTHOR 2 EUKARYOTIC STRUCTURAL GENOMICS (CESG) REVDAT 7 13-NOV-24 2Q4Q 1 REMARK REVDAT 6 15-NOV-23 2Q4Q 1 REMARK REVDAT 5 30-AUG-23 2Q4Q 1 SEQADV LINK REVDAT 4 10-AUG-11 2Q4Q 1 REMARK REVDAT 3 24-FEB-09 2Q4Q 1 VERSN REVDAT 2 02-OCT-07 2Q4Q 1 JRNL REVDAT 1 19-JUN-07 2Q4Q 0 JRNL AUTH E.J.LEVIN,D.A.KONDRASHOV,G.E.WESENBERG,G.N.PHILLIPS JRNL TITL ENSEMBLE REFINEMENT OF PROTEIN CRYSTAL STRUCTURES: JRNL TITL 2 VALIDATION AND APPLICATION. JRNL REF STRUCTURE V. 15 1040 2007 JRNL REFN ISSN 0969-2126 JRNL PMID 17850744 JRNL DOI 10.1016/J.STR.2007.06.019 REMARK 2 REMARK 2 RESOLUTION. 2.59 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD USING AMPLITUDES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.59 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.60 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 1716381.750 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 97.3 REMARK 3 NUMBER OF REFLECTIONS : 7583 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.173 REMARK 3 FREE R VALUE : 0.267 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.400 REMARK 3 FREE R VALUE TEST SET COUNT : 408 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.013 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.59 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.75 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 88.70 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 1062 REMARK 3 BIN R VALUE (WORKING SET) : 0.2610 REMARK 3 BIN FREE R VALUE : 0.3900 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.60 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 63 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.049 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1784 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 104 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.91000 REMARK 3 B22 (A**2) : 1.48000 REMARK 3 B33 (A**2) : -5.39000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.24 REMARK 3 ESD FROM SIGMAA (A) : 0.23 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.39 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.41 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.005 REMARK 3 BOND ANGLES (DEGREES) : 1.300 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 23.40 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.720 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 0.790 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 1.280 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 1.380 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 1.880 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.39 REMARK 3 BSOL : 42.16 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 THIS PDB ENTRY IS A RE-REFINEMENT USING AN ENSEMBLE MODEL OF THE REMARK 3 PREVIOUSLY REMARK 3 DEPOSITED SINGLE-CONFORMER STRUCTURE 2AB1 AND REMARK 3 THE FIRST DATA SET IN THE DEPOSITED STRUCTURE FACTOR FILE REMARK 3 FOR 2AB1 ALONG WITH THE R-FREE SET DEFINED THEREIN. THE COORDINATES REMARK 3 WERE GENERATED BY AN AUTOMATED PROTOCOL FROM AN INITIAL MODEL REMARK 3 CONSISTING REMARK 3 OF 16 IDENTICAL COPIES OF THE PROTEIN AND NON-WATER REMARK 3 HETERO-ATOMS ASSIGNED FRACTIONAL OCCUPANCIES ADDING UP TO ONE, AND REMARK 3 A REMARK 3 SINGLE COPY OF THE SOLVENT MOLECULES. REFINEMENT WAS CARRIED OUT REMARK 3 WITH REMARK 3 ALL THE CONFORMERS PRESENT SIMULTANEOUSLY AND WITH THE POTENTIAL REMARK 3 ENERGY REMARK 3 TERMS CORRESPONDING TO INTERACTIONS BETWEEN THE DIFFERENT REMARK 3 CONFORMERS REMARK 3 EXCLUDED. THE HELIX AND SHEET RECORDS WERE CALCULATED USING REMARK 3 COORDINATES REMARK 3 FROM THE FIRST CONFORMER ONLY. THE STRUCTURE VISUALIZATION PROGRAM REMARK 3 PYMOL IS WELL-SUITED FOR DIRECTLY VIEWING THE ENSEMBLE MODEL REMARK 3 PRESENTED IN THIS PDB FILE. REMARK 4 REMARK 4 2Q4Q COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-JUN-07. REMARK 100 THE DEPOSITION ID IS D_1000043146. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: RE-REFINEMENT USING REMARK 200 ENSEMBLE MODEL REMARK 200 SOFTWARE USED: CNS 1.1 REMARK 200 STARTING MODEL: PDB ENTRY 2AB1 REMARK 200 REMARK 200 REMARK: AUTHOR USED THE SF DATA FROM ENTRY 2AB1. REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.20 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 22.95600 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 44.59750 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 28.86550 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 44.59750 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 22.95600 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 28.86550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 1 TRP B 38 REMARK 465 1 ARG B 39 REMARK 465 1 GLU B 40 REMARK 465 1 THR B 41 REMARK 465 1 GLY B 42 REMARK 465 1 THR B 43 REMARK 465 1 GLU B 44 REMARK 465 1 HIS B 45 REMARK 465 1 SER B 46 REMARK 465 1 PRO B 47 REMARK 465 2 TRP B 38 REMARK 465 2 ARG B 39 REMARK 465 2 GLU B 40 REMARK 465 2 THR B 41 REMARK 465 2 GLY B 42 REMARK 465 2 THR B 43 REMARK 465 2 GLU B 44 REMARK 465 2 HIS B 45 REMARK 465 2 SER B 46 REMARK 465 2 PRO B 47 REMARK 465 3 TRP B 38 REMARK 465 3 ARG B 39 REMARK 465 3 GLU B 40 REMARK 465 3 THR B 41 REMARK 465 3 GLY B 42 REMARK 465 3 THR B 43 REMARK 465 3 GLU B 44 REMARK 465 3 HIS B 45 REMARK 465 3 SER B 46 REMARK 465 3 PRO B 47 REMARK 465 4 TRP B 38 REMARK 465 4 ARG B 39 REMARK 465 4 GLU B 40 REMARK 465 4 THR B 41 REMARK 465 4 GLY B 42 REMARK 465 4 THR B 43 REMARK 465 4 GLU B 44 REMARK 465 4 HIS B 45 REMARK 465 4 SER B 46 REMARK 465 4 PRO B 47 REMARK 465 5 TRP B 38 REMARK 465 5 ARG B 39 REMARK 465 5 GLU B 40 REMARK 465 5 THR B 41 REMARK 465 5 GLY B 42 REMARK 465 5 THR B 43 REMARK 465 5 GLU B 44 REMARK 465 5 HIS B 45 REMARK 465 5 SER B 46 REMARK 465 5 PRO B 47 REMARK 465 6 TRP B 38 REMARK 465 6 ARG B 39 REMARK 465 6 GLU B 40 REMARK 465 6 THR B 41 REMARK 465 6 GLY B 42 REMARK 465 6 THR B 43 REMARK 465 6 GLU B 44 REMARK 465 6 HIS B 45 REMARK 465 6 SER B 46 REMARK 465 6 PRO B 47 REMARK 465 7 TRP B 38 REMARK 465 7 ARG B 39 REMARK 465 7 GLU B 40 REMARK 465 7 THR B 41 REMARK 465 7 GLY B 42 REMARK 465 7 THR B 43 REMARK 465 7 GLU B 44 REMARK 465 7 HIS B 45 REMARK 465 7 SER B 46 REMARK 465 7 PRO B 47 REMARK 465 8 TRP B 38 REMARK 465 8 ARG B 39 REMARK 465 8 GLU B 40 REMARK 465 8 THR B 41 REMARK 465 8 GLY B 42 REMARK 465 8 THR B 43 REMARK 465 8 GLU B 44 REMARK 465 8 HIS B 45 REMARK 465 8 SER B 46 REMARK 465 8 PRO B 47 REMARK 465 9 TRP B 38 REMARK 465 9 ARG B 39 REMARK 465 9 GLU B 40 REMARK 465 9 THR B 41 REMARK 465 9 GLY B 42 REMARK 465 9 THR B 43 REMARK 465 9 GLU B 44 REMARK 465 9 HIS B 45 REMARK 465 9 SER B 46 REMARK 465 9 PRO B 47 REMARK 465 10 TRP B 38 REMARK 465 10 ARG B 39 REMARK 465 10 GLU B 40 REMARK 465 10 THR B 41 REMARK 465 10 GLY B 42 REMARK 465 10 THR B 43 REMARK 465 10 GLU B 44 REMARK 465 10 HIS B 45 REMARK 465 10 SER B 46 REMARK 465 10 PRO B 47 REMARK 465 11 TRP B 38 REMARK 465 11 ARG B 39 REMARK 465 11 GLU B 40 REMARK 465 11 THR B 41 REMARK 465 11 GLY B 42 REMARK 465 11 THR B 43 REMARK 465 11 GLU B 44 REMARK 465 11 HIS B 45 REMARK 465 11 SER B 46 REMARK 465 11 PRO B 47 REMARK 465 12 TRP B 38 REMARK 465 12 ARG B 39 REMARK 465 12 GLU B 40 REMARK 465 12 THR B 41 REMARK 465 12 GLY B 42 REMARK 465 12 THR B 43 REMARK 465 12 GLU B 44 REMARK 465 12 HIS B 45 REMARK 465 12 SER B 46 REMARK 465 12 PRO B 47 REMARK 465 13 TRP B 38 REMARK 465 13 ARG B 39 REMARK 465 13 GLU B 40 REMARK 465 13 THR B 41 REMARK 465 13 GLY B 42 REMARK 465 13 THR B 43 REMARK 465 13 GLU B 44 REMARK 465 13 HIS B 45 REMARK 465 13 SER B 46 REMARK 465 13 PRO B 47 REMARK 465 14 TRP B 38 REMARK 465 14 ARG B 39 REMARK 465 14 GLU B 40 REMARK 465 14 THR B 41 REMARK 465 14 GLY B 42 REMARK 465 14 THR B 43 REMARK 465 14 GLU B 44 REMARK 465 14 HIS B 45 REMARK 465 14 SER B 46 REMARK 465 14 PRO B 47 REMARK 465 15 TRP B 38 REMARK 465 15 ARG B 39 REMARK 465 15 GLU B 40 REMARK 465 15 THR B 41 REMARK 465 15 GLY B 42 REMARK 465 15 THR B 43 REMARK 465 15 GLU B 44 REMARK 465 15 HIS B 45 REMARK 465 15 SER B 46 REMARK 465 15 PRO B 47 REMARK 465 16 TRP B 38 REMARK 465 16 ARG B 39 REMARK 465 16 GLU B 40 REMARK 465 16 THR B 41 REMARK 465 16 GLY B 42 REMARK 465 16 THR B 43 REMARK 465 16 GLU B 44 REMARK 465 16 HIS B 45 REMARK 465 16 SER B 46 REMARK 465 16 PRO B 47 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LYS A 24 -62.45 -103.58 REMARK 500 1 SER A 33 -165.44 -160.48 REMARK 500 1 ARG A 34 150.79 178.54 REMARK 500 1 SER A 72 -2.04 -149.30 REMARK 500 1 THR A 121 -156.95 -129.35 REMARK 500 1 THR B 21 -148.89 -58.88 REMARK 500 1 THR B 22 -153.05 -133.64 REMARK 500 1 PRO B 30 102.83 -59.95 REMARK 500 1 THR B 35 77.33 -67.94 REMARK 500 1 GLU B 73 -0.78 68.19 REMARK 500 1 THR B 97 -53.35 -27.70 REMARK 500 2 ILE A 6 96.98 -63.12 REMARK 500 2 ALA A 7 57.83 -110.65 REMARK 500 2 SER A 8 93.24 -179.41 REMARK 500 2 LYS A 86 -17.27 -47.13 REMARK 500 2 THR A 121 -126.20 -148.42 REMARK 500 2 THR B 21 -133.43 -73.89 REMARK 500 2 THR B 22 -150.62 -134.69 REMARK 500 2 LYS B 24 -60.47 -126.80 REMARK 500 2 ARG B 69 53.41 -96.46 REMARK 500 2 HIS B 88 20.06 -140.91 REMARK 500 3 ASN A 20 48.73 -89.41 REMARK 500 3 ARG A 34 147.97 178.03 REMARK 500 3 GLN A 110 50.29 -104.49 REMARK 500 3 SER A 120 67.71 -118.75 REMARK 500 3 THR A 121 -118.70 -162.71 REMARK 500 3 ILE B 6 91.20 -69.95 REMARK 500 3 SER B 10 -164.42 -171.74 REMARK 500 3 LYS B 24 -62.81 -105.31 REMARK 500 3 VAL B 49 107.42 -53.96 REMARK 500 3 ARG B 69 46.34 -94.75 REMARK 500 4 PRO A 4 -175.23 -68.13 REMARK 500 4 ALA A 7 -96.86 -60.47 REMARK 500 4 TRP A 11 89.80 -60.31 REMARK 500 4 LYS A 17 97.09 -58.53 REMARK 500 4 THR A 21 -106.17 -139.48 REMARK 500 4 PRO A 30 108.96 -57.72 REMARK 500 4 SER A 72 78.92 -119.33 REMARK 500 4 GLU A 73 83.42 -17.15 REMARK 500 4 ALA A 74 -56.80 -122.81 REMARK 500 4 LEU A 75 125.02 -36.43 REMARK 500 4 GLN A 110 30.28 -76.82 REMARK 500 4 ARG A 113 81.69 -64.68 REMARK 500 4 THR A 121 -133.05 -147.05 REMARK 500 4 ASN B 20 32.66 -67.65 REMARK 500 4 TYR B 23 -159.02 -76.10 REMARK 500 4 LYS B 24 -27.73 -146.57 REMARK 500 4 ARG B 34 168.64 177.13 REMARK 500 4 GLU B 73 -24.54 62.47 REMARK 500 4 ALA B 74 -64.49 -15.74 REMARK 500 REMARK 500 THIS ENTRY HAS 260 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: GO.33759 RELATED DB: TARGETDB REMARK 900 RELATED ID: 2AB1 RELATED DB: PDB REMARK 900 ORIGINAL REFINEMENT BASED ON SAME DATA AND R-FREE SET. DBREF 2Q4Q A 2 122 UNP Q9H7C9 CK067_HUMAN 2 122 DBREF 2Q4Q B 2 122 UNP Q9H7C9 CK067_HUMAN 2 122 SEQADV 2Q4Q SER A 1 UNP Q9H7C9 EXPRESSION TAG SEQADV 2Q4Q MSE A 14 UNP Q9H7C9 MET 14 MODIFIED RESIDUE SEQADV 2Q4Q MSE A 71 UNP Q9H7C9 MET 71 MODIFIED RESIDUE SEQADV 2Q4Q SER B 1 UNP Q9H7C9 EXPRESSION TAG SEQADV 2Q4Q MSE B 14 UNP Q9H7C9 MET 14 MODIFIED RESIDUE SEQADV 2Q4Q MSE B 71 UNP Q9H7C9 MET 71 MODIFIED RESIDUE SEQRES 1 A 122 SER THR SER PRO GLU ILE ALA SER LEU SER TRP GLY GLN SEQRES 2 A 122 MSE LYS VAL LYS GLY SER ASN THR THR TYR LYS ASP CYS SEQRES 3 A 122 LYS VAL TRP PRO GLY GLY SER ARG THR TRP ASP TRP ARG SEQRES 4 A 122 GLU THR GLY THR GLU HIS SER PRO GLY VAL GLN PRO ALA SEQRES 5 A 122 ASP VAL LYS GLU VAL VAL GLU LYS GLY VAL GLN THR LEU SEQRES 6 A 122 VAL ILE GLY ARG GLY MSE SER GLU ALA LEU LYS VAL PRO SEQRES 7 A 122 SER SER THR VAL GLU TYR LEU LYS LYS HIS GLY ILE ASP SEQRES 8 A 122 VAL ARG VAL LEU GLN THR GLU GLN ALA VAL LYS GLU TYR SEQRES 9 A 122 ASN ALA LEU VAL ALA GLN GLY VAL ARG VAL GLY GLY VAL SEQRES 10 A 122 PHE HIS SER THR CYS SEQRES 1 B 122 SER THR SER PRO GLU ILE ALA SER LEU SER TRP GLY GLN SEQRES 2 B 122 MSE LYS VAL LYS GLY SER ASN THR THR TYR LYS ASP CYS SEQRES 3 B 122 LYS VAL TRP PRO GLY GLY SER ARG THR TRP ASP TRP ARG SEQRES 4 B 122 GLU THR GLY THR GLU HIS SER PRO GLY VAL GLN PRO ALA SEQRES 5 B 122 ASP VAL LYS GLU VAL VAL GLU LYS GLY VAL GLN THR LEU SEQRES 6 B 122 VAL ILE GLY ARG GLY MSE SER GLU ALA LEU LYS VAL PRO SEQRES 7 B 122 SER SER THR VAL GLU TYR LEU LYS LYS HIS GLY ILE ASP SEQRES 8 B 122 VAL ARG VAL LEU GLN THR GLU GLN ALA VAL LYS GLU TYR SEQRES 9 B 122 ASN ALA LEU VAL ALA GLN GLY VAL ARG VAL GLY GLY VAL SEQRES 10 B 122 PHE HIS SER THR CYS MODRES 2Q4Q MSE A 14 MET SELENOMETHIONINE MODRES 2Q4Q MSE A 71 MET SELENOMETHIONINE MODRES 2Q4Q MSE B 14 MET SELENOMETHIONINE MODRES 2Q4Q MSE B 71 MET SELENOMETHIONINE HET MSE A 14 8 HET MSE A 71 8 HET MSE B 14 8 HET MSE B 71 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 4(C5 H11 N O2 SE) FORMUL 3 HOH *104(H2 O) HELIX 1 1 ASP A 37 THR A 41 5 5 HELIX 2 2 GLN A 50 GLU A 59 1 10 HELIX 3 3 PRO A 78 LYS A 87 1 10 HELIX 4 4 GLN A 96 GLN A 110 1 15 HELIX 5 5 GLN B 50 GLY B 61 1 12 HELIX 6 6 PRO B 78 LYS B 86 1 9 HELIX 7 7 LYS B 87 GLY B 89 5 3 HELIX 8 8 GLN B 96 GLN B 110 1 15 SHEET 1 A 2 GLU A 5 SER A 10 0 SHEET 2 A 2 GLN A 13 LYS A 17 -1 O LYS A 15 N SER A 8 SHEET 1 B 5 GLY A 32 THR A 35 0 SHEET 2 B 5 CYS A 26 TRP A 29 -1 N LYS A 27 O ARG A 34 SHEET 3 B 5 VAL A 114 PHE A 118 -1 O GLY A 116 N VAL A 28 SHEET 4 B 5 THR A 64 GLY A 68 1 N GLY A 68 O VAL A 117 SHEET 5 B 5 ASP A 91 LEU A 95 1 O ARG A 93 N ILE A 67 SHEET 1 C 2 ILE B 6 SER B 10 0 SHEET 2 C 2 GLN B 13 VAL B 16 -1 O GLN B 13 N SER B 10 SHEET 1 D 3 ASP B 91 LEU B 95 0 SHEET 2 D 3 THR B 64 GLY B 68 1 N ILE B 67 O ARG B 93 SHEET 3 D 3 VAL B 114 VAL B 117 1 O GLY B 115 N VAL B 66 LINK C GLN A 13 N MSE A 14 1555 1555 1.33 LINK C MSE A 14 N LYS A 15 1555 1555 1.33 LINK C GLY A 70 N MSE A 71 1555 1555 1.33 LINK C MSE A 71 N SER A 72 1555 1555 1.33 LINK C GLN B 13 N MSE B 14 1555 1555 1.34 LINK C MSE B 14 N LYS B 15 1555 1555 1.33 LINK C GLY B 70 N MSE B 71 1555 1555 1.33 LINK C MSE B 71 N SER B 72 1555 1555 1.33 CISPEP 1 SER A 46 PRO A 47 1 -0.19 CISPEP 2 SER A 46 PRO A 47 2 -0.20 CISPEP 3 SER A 46 PRO A 47 3 0.15 CISPEP 4 SER A 46 PRO A 47 4 -0.11 CISPEP 5 SER A 46 PRO A 47 5 0.00 CISPEP 6 SER A 46 PRO A 47 6 0.24 CISPEP 7 SER A 46 PRO A 47 7 1.43 CISPEP 8 SER A 46 PRO A 47 8 0.08 CISPEP 9 SER A 46 PRO A 47 9 0.11 CISPEP 10 SER A 46 PRO A 47 10 0.04 CISPEP 11 SER A 46 PRO A 47 11 -0.50 CISPEP 12 SER A 46 PRO A 47 12 0.18 CISPEP 13 SER A 46 PRO A 47 13 -0.53 CISPEP 14 SER A 46 PRO A 47 14 -0.67 CISPEP 15 SER A 46 PRO A 47 15 0.14 CISPEP 16 SER A 46 PRO A 47 16 -0.06 CRYST1 45.912 57.731 89.195 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021781 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017322 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011211 0.00000 MODEL 1