HEADER TRANSFERASE 06-JUN-07 2Q7B TITLE CRYSTAL STRUCTURE OF ACETYLTRANSFERASE (NP_689019.1) FROM TITLE 2 STREPTOCOCCUS AGALACTIAE 2603 AT 2.00 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACETYLTRANSFERASE, GNAT FAMILY; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS AGALACTIAE 2603V/R; SOURCE 3 ORGANISM_TAXID: 208435; SOURCE 4 STRAIN: 2603 V/R, SEROTYPE V; SOURCE 5 ATCC: BAA-611; SOURCE 6 GENE: NP_689019.1, SAG2033; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: HK100; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS NP_689019.1, ACETYLTRANSFERASE (GNAT) FAMILY, STRUCTURAL GENOMICS, KEYWDS 2 JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE KEYWDS 3 INITIATIVE, PSI-2, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 7 25-JAN-23 2Q7B 1 REMARK SEQADV REVDAT 6 24-JUL-19 2Q7B 1 REMARK LINK REVDAT 5 25-OCT-17 2Q7B 1 REMARK REVDAT 4 18-OCT-17 2Q7B 1 REMARK REVDAT 3 13-JUL-11 2Q7B 1 VERSN REVDAT 2 24-FEB-09 2Q7B 1 VERSN REVDAT 1 26-JUN-07 2Q7B 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF ACETYLTRANSFERASE (NP_689019.1) FROM JRNL TITL 2 STREPTOCOCCUS AGALACTIAE 2603 AT 2.00 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.44 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 16309 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.187 REMARK 3 R VALUE (WORKING SET) : 0.185 REMARK 3 FREE R VALUE : 0.223 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 821 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1107 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2650 REMARK 3 BIN FREE R VALUE SET COUNT : 67 REMARK 3 BIN FREE R VALUE : 0.3720 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1362 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 14 REMARK 3 SOLVENT ATOMS : 92 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 19.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.04 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.09000 REMARK 3 B22 (A**2) : 0.09000 REMARK 3 B33 (A**2) : -0.13000 REMARK 3 B12 (A**2) : 0.04000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.152 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.143 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.114 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.222 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.963 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.952 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1472 ; 0.018 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1309 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1996 ; 1.511 ; 1.959 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3035 ; 0.942 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 177 ; 3.647 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 79 ;30.839 ;23.797 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 259 ;12.379 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 11 ;14.132 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 207 ; 0.120 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1676 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 334 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 277 ; 0.191 ; 0.300 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1319 ; 0.161 ; 0.300 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 738 ; 0.182 ; 0.500 REMARK 3 NON-BONDED TORSION OTHERS (A): 851 ; 0.086 ; 0.500 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 116 ; 0.179 ; 0.500 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 10 ; 0.114 ; 0.300 REMARK 3 SYMMETRY VDW OTHERS (A): 38 ; 0.126 ; 0.300 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 9 ; 0.108 ; 0.500 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 901 ; 1.618 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 347 ; 0.364 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1403 ; 2.477 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 671 ; 4.539 ; 8.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 593 ; 5.858 ;11.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -2 A 99 REMARK 3 ORIGIN FOR THE GROUP (A): -2.3400 52.2450 18.4950 REMARK 3 T TENSOR REMARK 3 T11: -0.0756 T22: -0.1287 REMARK 3 T33: -0.0734 T12: 0.0333 REMARK 3 T13: -0.0416 T23: -0.0355 REMARK 3 L TENSOR REMARK 3 L11: 0.9278 L22: 2.8968 REMARK 3 L33: 2.4874 L12: -0.7211 REMARK 3 L13: -0.1321 L23: 0.0547 REMARK 3 S TENSOR REMARK 3 S11: 0.1624 S12: 0.1779 S13: -0.1871 REMARK 3 S21: -0.2377 S22: -0.1094 S23: 0.2435 REMARK 3 S31: 0.1830 S32: -0.1082 S33: -0.0530 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 100 A 161 REMARK 3 ORIGIN FOR THE GROUP (A): 1.7190 57.2580 4.4700 REMARK 3 T TENSOR REMARK 3 T11: 0.1590 T22: 0.1475 REMARK 3 T33: -0.1803 T12: 0.2107 REMARK 3 T13: 0.0410 T23: -0.0841 REMARK 3 L TENSOR REMARK 3 L11: 5.0935 L22: 6.0194 REMARK 3 L33: 3.1250 L12: -0.8331 REMARK 3 L13: 1.6689 L23: -0.6101 REMARK 3 S TENSOR REMARK 3 S11: 0.5124 S12: 1.1969 S13: -0.0784 REMARK 3 S21: -1.1379 S22: -0.4377 S23: -0.3416 REMARK 3 S31: 0.2781 S32: 0.5622 S33: -0.0747 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. REMARK 3 2. ATOM RECORD CONTAINS RESIDUAL B FACTORS ONLY. REMARK 3 3. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE REMARK 3 INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY REMARK 3 OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 REMARK 3 TO ACCOUNT FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL REMARK 3 S-MET INCORPORATION. REMARK 3 4. ONE CHLORIDE ANION AND A CITRATE ANION (FLC) ARE MODELED REMARK 3 IN THE STRUCTURE. REMARK 4 REMARK 4 2Q7B COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-JUN-07. REMARK 100 THE DEPOSITION ID IS D_1000043239. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-MAY-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91837, 0.97932 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : FLAT COLLIMATING MIRROR, TOROID REMARK 200 FOCUSING MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16338 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 29.437 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 9.100 REMARK 200 R MERGE (I) : 0.10200 REMARK 200 R SYM (I) : 0.10200 REMARK 200 FOR THE DATA SET : 5.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.05 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 9.20 REMARK 200 R MERGE FOR SHELL (I) : 1.22900 REMARK 200 R SYM FOR SHELL (I) : 1.22900 REMARK 200 FOR SHELL : 0.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.60 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.65 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NANODROP, 10.0% PEG 6000, 0.1M CITRATE REMARK 280 PH 5.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 29.25733 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 58.51467 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 58.51467 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 29.25733 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC REMARK 300 ASYMMETRIC UNIT WHICH CONSISTS OF 1 CHAINS. SEE REMARK 350 FOR REMARK 300 INFORMATION ON GENERATING THE BIOLOGICAL MOLECULE(S). SIZE REMARK 300 EXCLUSION CHROMATOGRAPHY WITH STATIC LIGHT SCATTERING SUPPORTS REMARK 300 THE ASSIGNMENT OF A DIMER AS THE SIGNIFICANT OLIGOMERIZATION REMARK 300 STATE. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 117.75347 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 58.51467 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A -18 REMARK 465 GLY A -17 REMARK 465 SER A -16 REMARK 465 ASP A -15 REMARK 465 LYS A -14 REMARK 465 ILE A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 HIS A -9 REMARK 465 HIS A -8 REMARK 465 HIS A -7 REMARK 465 GLU A -6 REMARK 465 ASN A -5 REMARK 465 LEU A -4 REMARK 465 TYR A -3 REMARK 465 ASP A 162 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A -1 CG CD OE1 NE2 REMARK 470 LYS A 33 NZ REMARK 470 LYS A 62 CE NZ REMARK 470 LYS A 75 CG CD CE NZ REMARK 470 ARG A 97 CD NE CZ NH1 NH2 REMARK 470 LEU A 105 CD1 CD2 REMARK 470 LYS A 111 NZ REMARK 470 GLU A 121 OE1 OE2 REMARK 470 LYS A 124 CD CE NZ REMARK 470 ARG A 125 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 136 CG CD CE NZ REMARK 470 ASP A 141 OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 MSE A 104 CG MSE A 104 SE -0.216 REMARK 500 MSE A 104 SE MSE A 104 CE -0.368 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MSE A 104 CA - CB - CG ANGL. DEV. = -12.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 9 108.67 -160.87 REMARK 500 GLN A 37 54.56 -149.85 REMARK 500 GLN A 37 54.56 -152.10 REMARK 500 GLN A 42 50.68 -148.54 REMARK 500 TYR A 47 -61.99 -100.93 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 163 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FLC A 164 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 370427 RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE PROTEIN WAS EXPRESSED AND PURIFIED WITH A REMARK 999 TAG MGSDKIHHHHHHENLYFQG FROM CONSTRUCT. DBREF 2Q7B A 1 162 UNP Q8DX25 Q8DX25_STRA5 1 162 SEQADV 2Q7B MSE A -18 UNP Q8DX25 EXPRESSION TAG SEQADV 2Q7B GLY A -17 UNP Q8DX25 EXPRESSION TAG SEQADV 2Q7B SER A -16 UNP Q8DX25 EXPRESSION TAG SEQADV 2Q7B ASP A -15 UNP Q8DX25 EXPRESSION TAG SEQADV 2Q7B LYS A -14 UNP Q8DX25 EXPRESSION TAG SEQADV 2Q7B ILE A -13 UNP Q8DX25 EXPRESSION TAG SEQADV 2Q7B HIS A -12 UNP Q8DX25 EXPRESSION TAG SEQADV 2Q7B HIS A -11 UNP Q8DX25 EXPRESSION TAG SEQADV 2Q7B HIS A -10 UNP Q8DX25 EXPRESSION TAG SEQADV 2Q7B HIS A -9 UNP Q8DX25 EXPRESSION TAG SEQADV 2Q7B HIS A -8 UNP Q8DX25 EXPRESSION TAG SEQADV 2Q7B HIS A -7 UNP Q8DX25 EXPRESSION TAG SEQADV 2Q7B GLU A -6 UNP Q8DX25 EXPRESSION TAG SEQADV 2Q7B ASN A -5 UNP Q8DX25 EXPRESSION TAG SEQADV 2Q7B LEU A -4 UNP Q8DX25 EXPRESSION TAG SEQADV 2Q7B TYR A -3 UNP Q8DX25 EXPRESSION TAG SEQADV 2Q7B PHE A -2 UNP Q8DX25 EXPRESSION TAG SEQADV 2Q7B GLN A -1 UNP Q8DX25 EXPRESSION TAG SEQADV 2Q7B GLY A 0 UNP Q8DX25 EXPRESSION TAG SEQADV 2Q7B MSE A 1 UNP Q8DX25 MET 1 MODIFIED RESIDUE SEQADV 2Q7B MSE A 34 UNP Q8DX25 MET 34 MODIFIED RESIDUE SEQADV 2Q7B MSE A 104 UNP Q8DX25 MET 104 MODIFIED RESIDUE SEQRES 1 A 181 MSE GLY SER ASP LYS ILE HIS HIS HIS HIS HIS HIS GLU SEQRES 2 A 181 ASN LEU TYR PHE GLN GLY MSE GLU ILE LYS GLU TYR GLU SEQRES 3 A 181 ASN ASN PRO TYR HIS LEU ALA GLN LEU VAL ASP LEU ILE SEQRES 4 A 181 ASN TYR CYS GLN ASN ILE GLU ALA LYS LEU ASP ILE LYS SEQRES 5 A 181 MSE ALA GLU GLN ASP ASP ILE PHE GLN ILE GLU ASN TYR SEQRES 6 A 181 TYR GLN ASN ARG LYS GLY GLN PHE TRP ILE ALA LEU GLU SEQRES 7 A 181 ASN GLU LYS VAL VAL GLY SER ILE ALA LEU LEU ARG ILE SEQRES 8 A 181 ASP ASP LYS THR ALA VAL LEU LYS LYS PHE PHE THR TYR SEQRES 9 A 181 PRO LYS TYR ARG GLY ASN PRO VAL ARG LEU GLY ARG LYS SEQRES 10 A 181 LEU PHE GLU ARG PHE MSE LEU PHE ALA ARG ALA SER LYS SEQRES 11 A 181 PHE THR ARG ILE VAL LEU ASP THR PRO GLU LYS GLU LYS SEQRES 12 A 181 ARG SER HIS PHE PHE TYR GLU ASN GLN GLY PHE LYS GLN SEQRES 13 A 181 ILE THR ARG ASP GLU LEU ASP VAL ASP TYR ILE PHE PRO SEQRES 14 A 181 ASP ARG ASP SER ARG ILE TYR VAL LYS LEU LEU ASP MODRES 2Q7B MSE A 1 MET SELENOMETHIONINE MODRES 2Q7B MSE A 34 MET SELENOMETHIONINE MODRES 2Q7B MSE A 104 MET SELENOMETHIONINE HET MSE A 1 16 HET MSE A 34 8 HET MSE A 104 8 HET CL A 163 1 HET FLC A 164 13 HETNAM MSE SELENOMETHIONINE HETNAM CL CHLORIDE ION HETNAM FLC CITRATE ANION FORMUL 1 MSE 3(C5 H11 N O2 SE) FORMUL 2 CL CL 1- FORMUL 3 FLC C6 H5 O7 3- FORMUL 4 HOH *92(H2 O) HELIX 1 1 ASN A 9 ILE A 26 1 18 HELIX 2 2 LYS A 33 PHE A 41 5 9 HELIX 3 3 GLN A 42 TYR A 47 1 6 HELIX 4 4 GLN A 48 LYS A 51 5 4 HELIX 5 5 PRO A 86 ARG A 89 5 4 HELIX 6 6 ARG A 94 SER A 110 1 17 HELIX 7 7 GLU A 123 ASN A 132 1 10 SHEET 1 A 7 MSE A 1 GLU A 5 0 SHEET 2 A 7 GLN A 53 GLU A 59 -1 O LEU A 58 N GLU A 2 SHEET 3 A 7 LYS A 62 ARG A 71 -1 O ILE A 67 N TRP A 55 SHEET 4 A 7 THR A 76 THR A 84 -1 O PHE A 83 N SER A 66 SHEET 5 A 7 ARG A 114 PRO A 120 1 O VAL A 116 N LEU A 79 SHEET 6 A 7 SER A 154 LEU A 160 -1 O ARG A 155 N THR A 119 SHEET 7 A 7 LYS A 136 ILE A 138 -1 N LYS A 136 O VAL A 158 LINK C GLY A 0 N AMSE A 1 1555 1555 1.32 LINK C GLY A 0 N BMSE A 1 1555 1555 1.33 LINK C AMSE A 1 N GLU A 2 1555 1555 1.33 LINK C BMSE A 1 N GLU A 2 1555 1555 1.33 LINK C LYS A 33 N MSE A 34 1555 1555 1.33 LINK C MSE A 34 N ALA A 35 1555 1555 1.34 LINK C PHE A 103 N MSE A 104 1555 1555 1.33 LINK C MSE A 104 N BLEU A 105 1555 1555 1.33 LINK C MSE A 104 N ALEU A 105 1555 1555 1.33 CISPEP 1 ASN A 91 PRO A 92 0 -0.46 SITE 1 AC1 4 GLY A 90 ARG A 94 GLY A 96 ARG A 97 SITE 1 AC2 12 GLN A 24 GLN A 37 LYS A 80 LYS A 81 SITE 2 AC2 12 PHE A 83 ASP A 118 TYR A 147 PRO A 150 SITE 3 AC2 12 ARG A 152 HOH A 185 HOH A 189 HOH A 217 CRYST1 67.985 67.985 87.772 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014709 0.008492 0.000000 0.00000 SCALE2 0.000000 0.016985 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011393 0.00000