HEADER TRANSPORT PROTEIN 09-JUN-07 2Q89 TITLE CRYSTAL STRUCTURE OF EHUB IN COMPLEX WITH HYDROXYECTOINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE ABC TRANSPORTER AMINO ACID-BINDING PROTEIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: EHUB; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SINORHIZOBIUM MELILOTI; SOURCE 3 ORGANISM_TAXID: 382; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21 KEYWDS COMPATIBLE SOLUTES; SUBSTRATE-BINDING PROTEINS; ABC-TRANSPORTERS; KEYWDS 2 OSMOPROTECTION, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR N.HANEKOP,M.HOEING,L.SOHN-BOSSER,M.JEBBAR,L.SCHMITT,E.BREMER REVDAT 4 18-OCT-17 2Q89 1 REMARK REVDAT 3 13-JUL-11 2Q89 1 VERSN REVDAT 2 24-FEB-09 2Q89 1 VERSN REVDAT 1 01-JAN-08 2Q89 0 JRNL AUTH N.HANEKOP,M.HOING,L.SOHN-BOSSER,M.JEBBAR,L.SCHMITT,E.BREMER JRNL TITL CRYSTAL STRUCTURE OF THE LIGAND-BINDING PROTEIN EHUB FROM JRNL TITL 2 SINORHIZOBIUM MELILOTI REVEALS SUBSTRATE RECOGNITION OF THE JRNL TITL 3 COMPATIBLE SOLUTES ECTOINE AND HYDROXYECTOINE. JRNL REF J.MOL.BIOL. V. 374 1237 2007 JRNL REFN ISSN 0022-2836 JRNL PMID 17996893 JRNL DOI 10.1016/J.JMB.2007.09.071 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.6 REMARK 3 NUMBER OF REFLECTIONS : 12046 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.236 REMARK 3 R VALUE (WORKING SET) : 0.235 REMARK 3 FREE R VALUE : 0.261 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 589 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.36 REMARK 3 REFLECTION IN BIN (WORKING SET) : 809 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.49 REMARK 3 BIN R VALUE (WORKING SET) : 0.2410 REMARK 3 BIN FREE R VALUE SET COUNT : 43 REMARK 3 BIN FREE R VALUE : 0.2670 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1906 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 15 REMARK 3 SOLVENT ATOMS : 57 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.25 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.49000 REMARK 3 B22 (A**2) : 1.49000 REMARK 3 B33 (A**2) : -2.98000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.416 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.257 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.184 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 13.556 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.922 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.896 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1950 ; 0.007 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2637 ; 1.040 ; 1.986 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 256 ; 5.523 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 79 ;34.812 ;24.937 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 330 ;14.658 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;14.523 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 294 ; 0.063 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1483 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 917 ; 0.178 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1328 ; 0.298 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 90 ; 0.112 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 4 ; 0.119 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 39 ; 0.216 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 11 ; 0.119 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1322 ; 0.338 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2041 ; 0.582 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 697 ; 0.810 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 596 ; 1.419 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 0 A 98 REMARK 3 RESIDUE RANGE : A 200 A 256 REMARK 3 ORIGIN FOR THE GROUP (A): 24.2738 28.6531 22.9420 REMARK 3 T TENSOR REMARK 3 T11: -0.0925 T22: -0.0021 REMARK 3 T33: -0.0236 T12: 0.0279 REMARK 3 T13: 0.0025 T23: -0.0047 REMARK 3 L TENSOR REMARK 3 L11: 0.5860 L22: 1.5266 REMARK 3 L33: 1.6327 L12: 0.4461 REMARK 3 L13: 0.0121 L23: -0.1696 REMARK 3 S TENSOR REMARK 3 S11: 0.0337 S12: 0.0767 S13: 0.0358 REMARK 3 S21: 0.0487 S22: -0.0034 S23: -0.0186 REMARK 3 S31: -0.1142 S32: -0.0031 S33: -0.0303 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 99 A 199 REMARK 3 ORIGIN FOR THE GROUP (A): 13.8681 13.3451 41.1483 REMARK 3 T TENSOR REMARK 3 T11: -0.0512 T22: -0.0321 REMARK 3 T33: -0.0468 T12: -0.0206 REMARK 3 T13: -0.0081 T23: 0.0056 REMARK 3 L TENSOR REMARK 3 L11: 2.0803 L22: 1.8723 REMARK 3 L33: 1.7549 L12: 0.6246 REMARK 3 L13: -1.2902 L23: -0.3593 REMARK 3 S TENSOR REMARK 3 S11: 0.0095 S12: -0.0614 S13: -0.0731 REMARK 3 S21: 0.0969 S22: 0.0237 S23: -0.0740 REMARK 3 S31: -0.0251 S32: -0.0020 S33: -0.0332 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2Q89 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-JUN-07. REMARK 100 THE DEPOSITION ID IS D_1000043273. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : MPG/DESY, HAMBURG REMARK 200 BEAMLINE : BW6 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.05 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12062 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.5 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.05500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.34 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.3 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.20200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.29 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.43 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SODIUM ACETATE PEG CADMIUM CHLORIDE, REMARK 280 PH 4, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 273K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 80.78800 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 28.56750 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 28.56750 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 121.18200 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 28.56750 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 28.56750 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 40.39400 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 28.56750 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 28.56750 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 121.18200 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 28.56750 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 28.56750 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 40.39400 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 80.78800 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 CD CD A 602 O HOH A 657 6555 2.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 1 -94.13 -113.52 REMARK 500 ASN A 3 35.29 -99.09 REMARK 500 ASN A 20 69.68 63.36 REMARK 500 SER A 34 -157.88 -122.66 REMARK 500 ILE A 95 -65.76 -131.53 REMARK 500 ASN A 108 70.11 48.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A 603 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 211 OE1 REMARK 620 2 ASP A 215 OD2 91.2 REMARK 620 3 HOH A 651 O 88.8 86.9 REMARK 620 4 HOH A 658 O 83.8 94.1 172.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A 601 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 250 OE1 REMARK 620 2 HOH A 653 O 104.5 REMARK 620 3 HOH A 610 O 110.5 117.5 REMARK 620 4 HOH A 654 O 68.2 172.6 65.7 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD A 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 6CS A 501 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2Q88 RELATED DB: PDB DBREF 2Q89 A 1 256 UNP Q92WC8 Q92WC8_RHIME 28 283 SEQADV 2Q89 ARG A 0 UNP Q92WC8 EXPRESSION TAG SEQRES 1 A 257 ARG ASP GLU ASN LYS LEU GLU GLU LEU LYS GLU GLN GLY SEQRES 2 A 257 PHE ALA ARG ILE ALA ILE ALA ASN GLU PRO PRO PHE THR SEQRES 3 A 257 ALA VAL GLY ALA ASP GLY LYS VAL SER GLY ALA ALA PRO SEQRES 4 A 257 ASP VAL ALA ARG GLU ILE PHE LYS ARG LEU GLY VAL ALA SEQRES 5 A 257 ASP VAL VAL ALA SER ILE SER GLU TYR GLY ALA MET ILE SEQRES 6 A 257 PRO GLY LEU GLN ALA GLY ARG HIS ASP ALA ILE THR ALA SEQRES 7 A 257 GLY LEU PHE MET LYS PRO GLU ARG CYS ALA ALA VAL ALA SEQRES 8 A 257 TYR SER GLN PRO ILE LEU CYS ASP ALA GLU ALA PHE ALA SEQRES 9 A 257 LEU LYS LYS GLY ASN PRO LEU GLY LEU LYS SER TYR LYS SEQRES 10 A 257 ASP ILE ALA ASP ASN PRO ASP ALA LYS ILE GLY ALA PRO SEQRES 11 A 257 GLY GLY GLY THR GLU GLU LYS LEU ALA LEU GLU ALA GLY SEQRES 12 A 257 VAL PRO ARG ASP ARG VAL ILE VAL VAL PRO ASP GLY GLN SEQRES 13 A 257 SER GLY LEU LYS MET LEU GLN ASP GLY ARG ILE ASP VAL SEQRES 14 A 257 TYR SER LEU PRO VAL LEU SER ILE ASN ASP LEU VAL SER SEQRES 15 A 257 LYS ALA ASN ASP PRO ASN VAL GLU VAL LEU ALA PRO VAL SEQRES 16 A 257 GLU GLY ALA PRO VAL TYR CYS ASP GLY ALA ALA PHE ARG SEQRES 17 A 257 LYS GLY ASP GLU ALA LEU ARG ASP ALA PHE ASP VAL GLU SEQRES 18 A 257 LEU ALA LYS LEU LYS GLU SER GLY GLU PHE ALA LYS ILE SEQRES 19 A 257 ILE GLU PRO TYR GLY PHE SER ALA LYS ALA ALA MET SER SEQRES 20 A 257 THR THR ARG GLU LYS LEU CYS ALA ALA LYS HET CD A 601 1 HET CD A 602 1 HET CD A 603 1 HET CD A 604 1 HET 6CS A 501 11 HETNAM CD CADMIUM ION HETNAM 6CS (4S,5S)-5-HYDROXY-2-METHYL-1,4,5,6- HETNAM 2 6CS TETRAHYDROPYRIMIDINE-4-CARBOXYLIC ACID FORMUL 2 CD 4(CD 2+) FORMUL 6 6CS C6 H10 N2 O3 FORMUL 7 HOH *57(H2 O) HELIX 1 1 ASN A 3 GLY A 12 1 10 HELIX 2 2 GLY A 35 LEU A 48 1 14 HELIX 3 3 GLU A 59 GLY A 61 5 3 HELIX 4 4 ALA A 62 ALA A 69 1 8 HELIX 5 5 LYS A 82 ALA A 87 1 6 HELIX 6 6 SER A 114 ASP A 120 1 7 HELIX 7 7 GLY A 132 GLY A 142 1 11 HELIX 8 8 PRO A 144 ASP A 146 5 3 HELIX 9 9 ASP A 153 ASP A 163 1 11 HELIX 10 10 VAL A 173 ASN A 184 1 12 HELIX 11 11 ARG A 207 GLY A 209 5 3 HELIX 12 12 ASP A 210 GLY A 228 1 19 HELIX 13 13 GLY A 228 GLU A 235 1 8 HELIX 14 14 PRO A 236 GLY A 238 5 3 HELIX 15 15 SER A 240 SER A 246 1 7 HELIX 16 16 THR A 248 ALA A 254 1 7 SHEET 1 A 3 ASP A 52 ILE A 57 0 SHEET 2 A 3 PHE A 13 ILE A 18 1 N ILE A 18 O SER A 56 SHEET 3 A 3 ALA A 74 ILE A 75 1 O ALA A 74 N ALA A 17 SHEET 1 B 2 ALA A 26 VAL A 27 0 SHEET 2 B 2 VAL A 33 SER A 34 -1 O SER A 34 N ALA A 26 SHEET 1 C 2 ALA A 90 TYR A 91 0 SHEET 2 C 2 ALA A 205 PHE A 206 -1 O PHE A 206 N ALA A 90 SHEET 1 D 2 CYS A 97 ASP A 98 0 SHEET 2 D 2 TYR A 200 CYS A 201 -1 O TYR A 200 N ASP A 98 SHEET 1 E 5 VAL A 148 VAL A 150 0 SHEET 2 E 5 ILE A 126 ALA A 128 1 N ILE A 126 O ILE A 149 SHEET 3 E 5 VAL A 168 PRO A 172 1 O VAL A 168 N GLY A 127 SHEET 4 E 5 GLU A 100 LYS A 105 -1 N ALA A 103 O TYR A 169 SHEET 5 E 5 VAL A 188 LEU A 191 -1 O GLU A 189 N LEU A 104 SSBOND 1 CYS A 86 CYS A 253 1555 1555 2.03 SSBOND 2 CYS A 97 CYS A 201 1555 1555 2.04 LINK OE1 GLU A 211 CD CD A 603 1555 1555 2.32 LINK OD2 ASP A 215 CD CD A 603 1555 1555 2.14 LINK OE1 GLU A 250 CD CD A 601 1555 1555 2.38 LINK CD CD A 601 O HOH A 653 1555 1555 2.07 LINK CD CD A 601 O HOH A 610 1555 1555 2.52 LINK CD CD A 601 O HOH A 654 1555 1555 2.35 LINK CD CD A 603 O HOH A 651 1555 1555 2.03 LINK CD CD A 603 O HOH A 658 1555 1555 2.27 LINK CD CD A 604 O HOH A 608 1555 1555 2.45 CISPEP 1 PRO A 22 PRO A 23 0 4.05 CISPEP 2 ALA A 192 PRO A 193 0 -6.66 SITE 1 AC1 5 ASP A 146 GLU A 250 HOH A 610 HOH A 653 SITE 2 AC1 5 HOH A 654 SITE 1 AC2 5 ASP A 117 HOH A 607 HOH A 655 HOH A 656 SITE 2 AC2 5 HOH A 657 SITE 1 AC3 6 ASP A 167 GLU A 211 ASP A 215 HOH A 651 SITE 2 AC3 6 HOH A 658 HOH A 659 SITE 1 AC4 5 SER A 56 GLU A 59 HIS A 72 HOH A 608 SITE 2 AC4 5 HOH A 648 SITE 1 AC5 12 GLU A 21 PHE A 24 TYR A 60 ALA A 77 SITE 2 AC5 12 GLY A 78 LEU A 79 PHE A 80 ARG A 85 SITE 3 AC5 12 GLY A 132 THR A 133 GLU A 134 PRO A 172 CRYST1 57.135 57.135 161.576 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017502 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017502 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006189 0.00000