HEADER HYDROLASE 11-JUN-07 2Q8M TITLE T-LIKE FRUCTOSE-1,6-BISPHOSPHATASE FROM ESCHERICHIA COLI WITH AMP, TITLE 2 GLUCOSE 6-PHOSPHATE, AND FRUCTOSE 1,6-BISPHOSPHATE BOUND COMPND MOL_ID: 1; COMPND 2 MOLECULE: FRUCTOSE-BISPHOSPHATASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 3.1.3.11; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SHIGELLA BOYDII; SOURCE 3 ORGANISM_TAXID: 621; SOURCE 4 STRAIN: XL1-BLUE; SOURCE 5 GENE: FBP; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: DF657; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET-24B KEYWDS GLYCOLYSIS, GLUCONEOGENESIS, BACTERIA, CARBOHYDRATE METABOLISM, KEYWDS 2 DIABETES, PROTEIN-PROTEIN INTERACTIONS, PROTEOBACTERIA, GRAM- KEYWDS 3 NEGATIVE, PROTEIN CRYSTALLOGRAPHY, HETEROTROPHIC, ALLOSTERIC KEYWDS 4 REGULATION, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR J.K.HINES,C.E.KRUESEL,H.J.FROMM,R.B.HONZATKO REVDAT 7 15-NOV-23 2Q8M 1 REMARK REVDAT 6 30-AUG-23 2Q8M 1 HETSYN REVDAT 5 29-JUL-20 2Q8M 1 COMPND REMARK SEQADV HETNAM REVDAT 5 2 1 LINK SITE REVDAT 4 13-JUL-11 2Q8M 1 VERSN REVDAT 3 24-FEB-09 2Q8M 1 VERSN REVDAT 2 04-SEP-07 2Q8M 1 JRNL REVDAT 1 19-JUN-07 2Q8M 0 JRNL AUTH J.K.HINES,C.E.KRUESEL,H.J.FROMM,R.B.HONZATKO JRNL TITL STRUCTURE OF INHIBITED FRUCTOSE-1,6-BISPHOSPHATASE FROM JRNL TITL 2 ESCHERICHIA COLI: DISTINCT ALLOSTERIC INHIBITION SITES FOR JRNL TITL 3 AMP AND GLUCOSE 6-PHOSPHATE AND THE CHARACTERIZATION OF A JRNL TITL 4 GLUCONEOGENIC SWITCH. JRNL REF J.BIOL.CHEM. V. 282 24697 2007 JRNL REFN ISSN 0021-9258 JRNL PMID 17567577 JRNL DOI 10.1074/JBC.M703580200 REMARK 2 REMARK 2 RESOLUTION. 2.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.77 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 2166598.500 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 96.5 REMARK 3 NUMBER OF REFLECTIONS : 63536 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.209 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.100 REMARK 3 FREE R VALUE TEST SET COUNT : 6416 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.003 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.05 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.12 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.70 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 5579 REMARK 3 BIN R VALUE (WORKING SET) : 0.2580 REMARK 3 BIN FREE R VALUE : 0.2820 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 10.00 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 620 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.011 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4868 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 109 REMARK 3 SOLVENT ATOMS : 312 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.71000 REMARK 3 B22 (A**2) : -1.71000 REMARK 3 B33 (A**2) : 3.43000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.23 REMARK 3 ESD FROM SIGMAA (A) : 0.18 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.27 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.21 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.006 REMARK 3 BOND ANGLES (DEGREES) : 1.200 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 22.80 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.740 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.380 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.200 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 2.360 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.240 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.37 REMARK 3 BSOL : 51.77 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : LIG.PARAM REMARK 3 PARAMETER FILE 5 : G6P-MES.PARAM REMARK 3 PARAMETER FILE 6 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : ION.TOP REMARK 3 TOPOLOGY FILE 4 : LIG.TOP REMARK 3 TOPOLOGY FILE 5 : G6P-MES.TOP REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2Q8M COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-JUN-07. REMARK 100 THE DEPOSITION ID IS D_1000043286. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-JAN-05 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 4.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : NOIR-1 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : D*TREK REMARK 200 DATA SCALING SOFTWARE : D*TREK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 63542 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.050 REMARK 200 RESOLUTION RANGE LOW (A) : 39.410 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.6 REMARK 200 DATA REDUNDANCY : 2.430 REMARK 200 R MERGE (I) : 0.06800 REMARK 200 R SYM (I) : 0.06800 REMARK 200 FOR THE DATA SET : 9.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.05 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.12 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.7 REMARK 200 DATA REDUNDANCY IN SHELL : 2.47 REMARK 200 R MERGE FOR SHELL (I) : 0.25500 REMARK 200 R SYM FOR SHELL (I) : 0.25500 REMARK 200 FOR SHELL : 3.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 2GQ1 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.45 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN SOLUTION: (15 MG/ML ENZYME (PH REMARK 280 7.4), 20 MM DITHIOTHREITOL (DTT), 0.1 MM EDTA, 5 MM FRU-1,6-P2, REMARK 280 5 MM MGCL2, AND 5 MM AMP) PRECIPITANT SOLUTION: (50 MM MES-NAOH, REMARK 280 PH 6.5, 13% (W/V) PEG 10,000, AND 20% (W/V) SUCROSE), PH 7.0, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 295.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+1/4 REMARK 290 4555 Y,-X,Z+3/4 REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z+1/2 REMARK 290 7555 Y,X,-Z+3/4 REMARK 290 8555 -Y,-X,-Z+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 66.14000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 33.07000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 99.21000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 66.14000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 99.21000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 33.07000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 18800 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 42840 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -205.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 124.64000 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 124.64000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 33.07000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 VAL A 46 REMARK 465 ASP A 47 REMARK 465 ILE A 48 REMARK 465 LEU A 49 REMARK 465 GLY A 50 REMARK 465 ALA A 51 REMARK 465 SER A 52 REMARK 465 GLY A 53 REMARK 465 ALA A 54 REMARK 465 GLU A 55 REMARK 465 ASN A 56 REMARK 465 VAL A 57 REMARK 465 GLN A 58 REMARK 465 GLY A 59 REMARK 465 GLU A 60 REMARK 465 VAL A 61 REMARK 465 GLN A 62 REMARK 465 GLN A 63 REMARK 465 LYS A 64 REMARK 465 LEU A 65 REMARK 465 ASP A 66 REMARK 465 LEU A 67 REMARK 465 VAL B 46 REMARK 465 ASP B 47 REMARK 465 ILE B 48 REMARK 465 LEU B 49 REMARK 465 GLY B 50 REMARK 465 ALA B 51 REMARK 465 SER B 52 REMARK 465 GLY B 53 REMARK 465 ALA B 54 REMARK 465 GLU B 55 REMARK 465 ASN B 56 REMARK 465 VAL B 57 REMARK 465 GLN B 58 REMARK 465 GLY B 59 REMARK 465 GLU B 60 REMARK 465 VAL B 61 REMARK 465 GLN B 62 REMARK 465 GLN B 63 REMARK 465 LYS B 64 REMARK 465 LEU B 65 REMARK 465 ASP B 66 REMARK 465 LEU B 67 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 42 50.05 -143.47 REMARK 500 GLU A 90 -75.96 -70.09 REMARK 500 GLU A 91 130.35 -35.96 REMARK 500 LYS A 201 30.13 -147.88 REMARK 500 ASP A 228 85.54 -167.45 REMARK 500 GLU A 275 -54.08 -126.12 REMARK 500 LYS B 42 52.64 -110.72 REMARK 500 LYS B 201 32.91 -147.80 REMARK 500 ASP B 228 90.82 -161.33 REMARK 500 TYR B 239 89.54 -153.40 REMARK 500 GLU B 275 -52.19 -128.30 REMARK 500 LYS B 294 -42.22 -133.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 347 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 89 OE1 REMARK 620 2 ASP A 110 OD2 90.8 REMARK 620 3 LEU A 112 O 172.0 96.0 REMARK 620 4 FBP A 344 O1P 94.5 91.4 89.6 REMARK 620 5 HOH A 659 O 94.0 83.2 82.6 170.0 REMARK 620 6 HOH A 660 O 91.3 176.0 81.8 91.8 93.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 348 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 110 OD1 REMARK 620 2 ASP A 113 OD1 99.2 REMARK 620 3 GLU A 275 OE1 110.0 104.6 REMARK 620 4 FBP A 344 O1P 94.0 108.5 134.9 REMARK 620 5 FBP A 344 O1 160.5 87.0 85.9 66.5 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 345 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 89 OE1 REMARK 620 2 ASP B 110 OD2 82.5 REMARK 620 3 LEU B 112 O 167.5 87.2 REMARK 620 4 FBP B 342 O1P 86.3 89.6 100.7 REMARK 620 5 HOH B 490 O 89.9 76.4 80.9 165.9 REMARK 620 6 HOH B 657 O 110.6 166.3 79.4 95.0 99.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 346 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 110 OD1 REMARK 620 2 ASP B 113 OD1 100.5 REMARK 620 3 GLU B 275 OE1 113.4 92.5 REMARK 620 4 FBP B 342 O1P 94.1 118.3 134.5 REMARK 620 5 FBP B 342 O1 160.9 90.3 81.6 66.8 REMARK 620 N 1 2 3 4 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2GQ1 RELATED DB: PDB REMARK 900 RELATED ID: 2OWZ RELATED DB: PDB REMARK 900 RELATED ID: 2OX3 RELATED DB: PDB DBREF 2Q8M A 1 332 UNP Q31TG8 Q31TG8_SHIBS 1 332 DBREF 2Q8M B 1 332 UNP Q31TG8 Q31TG8_SHIBS 1 332 SEQADV 2Q8M MSE A 1 UNP Q31TG8 MET 1 MODIFIED RESIDUE SEQADV 2Q8M MSE A 109 UNP Q31TG8 MET 109 MODIFIED RESIDUE SEQADV 2Q8M MSE A 166 UNP Q31TG8 MET 166 MODIFIED RESIDUE SEQADV 2Q8M MSE A 194 UNP Q31TG8 MET 194 MODIFIED RESIDUE SEQADV 2Q8M MSE A 279 UNP Q31TG8 MET 279 MODIFIED RESIDUE SEQADV 2Q8M MSE A 318 UNP Q31TG8 MET 318 MODIFIED RESIDUE SEQADV 2Q8M MSE B 1 UNP Q31TG8 MET 1 MODIFIED RESIDUE SEQADV 2Q8M MSE B 109 UNP Q31TG8 MET 109 MODIFIED RESIDUE SEQADV 2Q8M MSE B 166 UNP Q31TG8 MET 166 MODIFIED RESIDUE SEQADV 2Q8M MSE B 194 UNP Q31TG8 MET 194 MODIFIED RESIDUE SEQADV 2Q8M MSE B 279 UNP Q31TG8 MET 279 MODIFIED RESIDUE SEQADV 2Q8M MSE B 318 UNP Q31TG8 MET 318 MODIFIED RESIDUE SEQRES 1 A 332 MSE LYS THR LEU GLY GLU PHE ILE VAL GLU LYS GLN HIS SEQRES 2 A 332 GLU PHE SER HIS ALA THR GLY GLU LEU THR ALA LEU LEU SEQRES 3 A 332 SER ALA ILE LYS LEU GLY ALA LYS ILE ILE HIS ARG ASP SEQRES 4 A 332 ILE ASN LYS ALA GLY LEU VAL ASP ILE LEU GLY ALA SER SEQRES 5 A 332 GLY ALA GLU ASN VAL GLN GLY GLU VAL GLN GLN LYS LEU SEQRES 6 A 332 ASP LEU PHE ALA ASN GLU LYS LEU LYS ALA ALA LEU LYS SEQRES 7 A 332 ALA ARG ASP ILE VAL ALA GLY ILE ALA SER GLU GLU GLU SEQRES 8 A 332 ASP GLU ILE VAL VAL PHE GLU GLY CYS GLU HIS ALA LYS SEQRES 9 A 332 TYR VAL VAL LEU MSE ASP PRO LEU ASP GLY SER SER ASN SEQRES 10 A 332 ILE ASP VAL ASN VAL SER VAL GLY THR ILE PHE SER ILE SEQRES 11 A 332 TYR ARG ARG VAL THR PRO VAL GLY THR PRO VAL THR GLU SEQRES 12 A 332 GLU ASP PHE LEU GLN PRO GLY ASN LYS GLN VAL ALA ALA SEQRES 13 A 332 GLY TYR VAL VAL TYR GLY SER SER THR MSE LEU VAL TYR SEQRES 14 A 332 THR THR GLY CYS GLY VAL HIS ALA PHE THR TYR ASP PRO SEQRES 15 A 332 SER LEU GLY VAL PHE CYS LEU CYS GLN GLU ARG MSE ARG SEQRES 16 A 332 PHE PRO GLU LYS GLY LYS THR TYR SER ILE ASN GLU GLY SEQRES 17 A 332 ASN TYR ILE LYS PHE PRO ASN GLY VAL LYS LYS TYR ILE SEQRES 18 A 332 LYS PHE CYS GLN GLU GLU ASP LYS SER THR ASN ARG PRO SEQRES 19 A 332 TYR THR SER ARG TYR ILE GLY SER LEU VAL ALA ASP PHE SEQRES 20 A 332 HIS ARG ASN LEU LEU LYS GLY GLY ILE TYR LEU TYR PRO SEQRES 21 A 332 SER THR ALA SER HIS PRO ASP GLY LYS LEU ARG LEU LEU SEQRES 22 A 332 TYR GLU CYS ASN PRO MSE ALA PHE LEU ALA GLU GLN ALA SEQRES 23 A 332 GLY GLY LYS ALA SER ASP GLY LYS GLU ARG ILE LEU ASP SEQRES 24 A 332 ILE ILE PRO GLU THR LEU HIS GLN ARG ARG SER PHE PHE SEQRES 25 A 332 VAL GLY ASN ASP HIS MSE VAL GLU ASP VAL GLU ARG PHE SEQRES 26 A 332 ILE ARG GLU PHE PRO ASP ALA SEQRES 1 B 332 MSE LYS THR LEU GLY GLU PHE ILE VAL GLU LYS GLN HIS SEQRES 2 B 332 GLU PHE SER HIS ALA THR GLY GLU LEU THR ALA LEU LEU SEQRES 3 B 332 SER ALA ILE LYS LEU GLY ALA LYS ILE ILE HIS ARG ASP SEQRES 4 B 332 ILE ASN LYS ALA GLY LEU VAL ASP ILE LEU GLY ALA SER SEQRES 5 B 332 GLY ALA GLU ASN VAL GLN GLY GLU VAL GLN GLN LYS LEU SEQRES 6 B 332 ASP LEU PHE ALA ASN GLU LYS LEU LYS ALA ALA LEU LYS SEQRES 7 B 332 ALA ARG ASP ILE VAL ALA GLY ILE ALA SER GLU GLU GLU SEQRES 8 B 332 ASP GLU ILE VAL VAL PHE GLU GLY CYS GLU HIS ALA LYS SEQRES 9 B 332 TYR VAL VAL LEU MSE ASP PRO LEU ASP GLY SER SER ASN SEQRES 10 B 332 ILE ASP VAL ASN VAL SER VAL GLY THR ILE PHE SER ILE SEQRES 11 B 332 TYR ARG ARG VAL THR PRO VAL GLY THR PRO VAL THR GLU SEQRES 12 B 332 GLU ASP PHE LEU GLN PRO GLY ASN LYS GLN VAL ALA ALA SEQRES 13 B 332 GLY TYR VAL VAL TYR GLY SER SER THR MSE LEU VAL TYR SEQRES 14 B 332 THR THR GLY CYS GLY VAL HIS ALA PHE THR TYR ASP PRO SEQRES 15 B 332 SER LEU GLY VAL PHE CYS LEU CYS GLN GLU ARG MSE ARG SEQRES 16 B 332 PHE PRO GLU LYS GLY LYS THR TYR SER ILE ASN GLU GLY SEQRES 17 B 332 ASN TYR ILE LYS PHE PRO ASN GLY VAL LYS LYS TYR ILE SEQRES 18 B 332 LYS PHE CYS GLN GLU GLU ASP LYS SER THR ASN ARG PRO SEQRES 19 B 332 TYR THR SER ARG TYR ILE GLY SER LEU VAL ALA ASP PHE SEQRES 20 B 332 HIS ARG ASN LEU LEU LYS GLY GLY ILE TYR LEU TYR PRO SEQRES 21 B 332 SER THR ALA SER HIS PRO ASP GLY LYS LEU ARG LEU LEU SEQRES 22 B 332 TYR GLU CYS ASN PRO MSE ALA PHE LEU ALA GLU GLN ALA SEQRES 23 B 332 GLY GLY LYS ALA SER ASP GLY LYS GLU ARG ILE LEU ASP SEQRES 24 B 332 ILE ILE PRO GLU THR LEU HIS GLN ARG ARG SER PHE PHE SEQRES 25 B 332 VAL GLY ASN ASP HIS MSE VAL GLU ASP VAL GLU ARG PHE SEQRES 26 B 332 ILE ARG GLU PHE PRO ASP ALA MODRES 2Q8M MSE A 1 MET SELENOMETHIONINE MODRES 2Q8M MSE A 109 MET SELENOMETHIONINE MODRES 2Q8M MSE A 166 MET SELENOMETHIONINE MODRES 2Q8M MSE A 194 MET SELENOMETHIONINE MODRES 2Q8M MSE A 279 MET SELENOMETHIONINE MODRES 2Q8M MSE A 318 MET SELENOMETHIONINE MODRES 2Q8M MSE B 1 MET SELENOMETHIONINE MODRES 2Q8M MSE B 109 MET SELENOMETHIONINE MODRES 2Q8M MSE B 166 MET SELENOMETHIONINE MODRES 2Q8M MSE B 194 MET SELENOMETHIONINE MODRES 2Q8M MSE B 279 MET SELENOMETHIONINE MODRES 2Q8M MSE B 318 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 109 8 HET MSE A 166 8 HET MSE A 194 8 HET MSE A 279 8 HET MSE A 318 8 HET MSE B 1 8 HET MSE B 109 8 HET MSE B 166 8 HET MSE B 194 8 HET MSE B 279 8 HET MSE B 318 8 HET BG6 A 340 32 HET FBP A 344 20 HET MG A 347 1 HET MG A 348 1 HET CL A 350 1 HET CL A 351 1 HET AMP A 341 23 HET FBP B 342 20 HET MG B 345 1 HET MG B 346 1 HET CL B 349 1 HET AMP B 343 23 HETNAM MSE SELENOMETHIONINE HETNAM BG6 6-O-PHOSPHONO-BETA-D-GLUCOPYRANOSE HETNAM FBP 1,6-DI-O-PHOSPHONO-BETA-D-FRUCTOFURANOSE HETNAM MG MAGNESIUM ION HETNAM CL CHLORIDE ION HETNAM AMP ADENOSINE MONOPHOSPHATE HETSYN BG6 BETA-D-GLUCOSE-6-PHOSPHATE; 6-O-PHOSPHONO-BETA-D- HETSYN 2 BG6 GLUCOSE; 6-O-PHOSPHONO-D-GLUCOSE; 6-O-PHOSPHONO- HETSYN 3 BG6 GLUCOSE HETSYN FBP BETA-FRUCTOSE-1,6-DIPHOSPHATE; FRUCTOSE-1,6- HETSYN 2 FBP BISPHOSPHATE; 1,6-DI-O-PHOSPHONO-BETA-D-FRUCTOSE; 1,6- HETSYN 3 FBP DI-O-PHOSPHONO-D-FRUCTOSE; 1,6-DI-O-PHOSPHONO-FRUCTOSE FORMUL 1 MSE 12(C5 H11 N O2 SE) FORMUL 3 BG6 C6 H13 O9 P FORMUL 4 FBP 2(C6 H14 O12 P2) FORMUL 5 MG 4(MG 2+) FORMUL 7 CL 3(CL 1-) FORMUL 9 AMP 2(C10 H14 N5 O7 P) FORMUL 15 HOH *312(H2 O) HELIX 1 1 THR A 3 HIS A 13 1 11 HELIX 2 2 GLY A 20 ASN A 41 1 22 HELIX 3 3 PHE A 68 ALA A 79 1 12 HELIX 4 4 GLY A 114 ASN A 121 5 8 HELIX 5 5 THR A 142 LEU A 147 1 6 HELIX 6 6 PRO A 149 GLN A 153 5 5 HELIX 7 7 ASN A 206 PHE A 213 5 8 HELIX 8 8 PRO A 214 GLU A 226 1 13 HELIX 9 9 ASP A 228 ASN A 232 5 5 HELIX 10 10 SER A 242 GLY A 254 1 13 HELIX 11 11 GLU A 275 ALA A 286 1 12 HELIX 12 12 ARG A 296 ILE A 300 5 5 HELIX 13 13 ASN A 315 PHE A 329 1 15 HELIX 14 14 THR B 3 HIS B 13 1 11 HELIX 15 15 GLY B 20 LYS B 42 1 23 HELIX 16 16 PHE B 68 ARG B 80 1 13 HELIX 17 17 GLY B 114 ASN B 121 5 8 HELIX 18 18 THR B 142 PHE B 146 5 5 HELIX 19 19 PRO B 149 ASN B 151 5 3 HELIX 20 20 ASN B 206 PHE B 213 5 8 HELIX 21 21 PRO B 214 GLU B 226 1 13 HELIX 22 22 ASP B 228 ASN B 232 5 5 HELIX 23 23 SER B 242 GLY B 254 1 13 HELIX 24 24 GLU B 275 ALA B 286 1 12 HELIX 25 25 ARG B 296 ILE B 300 5 5 HELIX 26 26 ASN B 315 PHE B 329 1 15 SHEET 1 A 8 VAL A 95 VAL A 96 0 SHEET 2 A 8 GLY A 85 SER A 88 -1 N ILE A 86 O VAL A 95 SHEET 3 A 8 TYR A 105 ASP A 113 1 O MSE A 109 N ALA A 87 SHEET 4 A 8 VAL A 124 ARG A 132 -1 O GLY A 125 N ASP A 113 SHEET 5 A 8 ALA A 155 TYR A 161 -1 O ALA A 155 N ILE A 130 SHEET 6 A 8 THR A 165 THR A 170 -1 O VAL A 168 N TYR A 158 SHEET 7 A 8 VAL A 175 TYR A 180 -1 O HIS A 176 N TYR A 169 SHEET 8 A 8 PHE A 187 MSE A 194 -1 O MSE A 194 N VAL A 175 SHEET 1 B 5 THR A 236 SER A 237 0 SHEET 2 B 5 THR A 202 SER A 204 1 N TYR A 203 O THR A 236 SHEET 3 B 5 ILE A 256 TYR A 259 1 O LEU A 258 N SER A 204 SHEET 4 B 5 PHE A 311 GLY A 314 -1 O VAL A 313 N TYR A 257 SHEET 5 B 5 LYS A 289 SER A 291 -1 N LYS A 289 O GLY A 314 SHEET 1 C 8 GLU B 93 GLU B 98 0 SHEET 2 C 8 GLY B 85 GLU B 90 -1 N GLU B 90 O GLU B 93 SHEET 3 C 8 TYR B 105 ASP B 113 1 O VAL B 107 N ALA B 87 SHEET 4 C 8 VAL B 124 ARG B 132 -1 O GLY B 125 N ASP B 113 SHEET 5 C 8 GLN B 153 TYR B 161 -1 O VAL B 154 N ILE B 130 SHEET 6 C 8 THR B 165 THR B 170 -1 O VAL B 168 N TYR B 158 SHEET 7 C 8 HIS B 176 ASP B 181 -1 O HIS B 176 N TYR B 169 SHEET 8 C 8 VAL B 186 GLN B 191 -1 O CYS B 188 N THR B 179 SHEET 1 D 5 THR B 236 SER B 237 0 SHEET 2 D 5 THR B 202 SER B 204 1 N TYR B 203 O THR B 236 SHEET 3 D 5 ILE B 256 TYR B 259 1 O LEU B 258 N SER B 204 SHEET 4 D 5 PHE B 311 GLY B 314 -1 O VAL B 313 N TYR B 257 SHEET 5 D 5 LYS B 289 SER B 291 -1 N SER B 291 O PHE B 312 LINK C MSE A 1 N LYS A 2 1555 1555 1.33 LINK C LEU A 108 N MSE A 109 1555 1555 1.32 LINK C MSE A 109 N ASP A 110 1555 1555 1.33 LINK C THR A 165 N MSE A 166 1555 1555 1.33 LINK C MSE A 166 N LEU A 167 1555 1555 1.33 LINK C ARG A 193 N MSE A 194 1555 1555 1.33 LINK C MSE A 194 N ARG A 195 1555 1555 1.33 LINK C PRO A 278 N MSE A 279 1555 1555 1.33 LINK C MSE A 279 N ALA A 280 1555 1555 1.33 LINK C HIS A 317 N MSE A 318 1555 1555 1.33 LINK C MSE A 318 N VAL A 319 1555 1555 1.33 LINK C MSE B 1 N LYS B 2 1555 1555 1.33 LINK C LEU B 108 N MSE B 109 1555 1555 1.33 LINK C MSE B 109 N ASP B 110 1555 1555 1.33 LINK C THR B 165 N MSE B 166 1555 1555 1.33 LINK C MSE B 166 N LEU B 167 1555 1555 1.33 LINK C ARG B 193 N MSE B 194 1555 1555 1.33 LINK C MSE B 194 N ARG B 195 1555 1555 1.33 LINK C PRO B 278 N MSE B 279 1555 1555 1.33 LINK C MSE B 279 N ALA B 280 1555 1555 1.33 LINK C HIS B 317 N MSE B 318 1555 1555 1.33 LINK C MSE B 318 N VAL B 319 1555 1555 1.33 LINK OE1 GLU A 89 MG MG A 347 1555 1555 2.44 LINK OD2 ASP A 110 MG MG A 347 1555 1555 2.23 LINK OD1 ASP A 110 MG MG A 348 1555 1555 1.94 LINK O LEU A 112 MG MG A 347 1555 1555 2.47 LINK OD1 ASP A 113 MG MG A 348 1555 1555 2.31 LINK OE1 GLU A 275 MG MG A 348 1555 1555 2.22 LINK O1P FBP A 344 MG MG A 347 1555 1555 2.00 LINK O1P FBP A 344 MG MG A 348 1555 1555 2.47 LINK O1 FBP A 344 MG MG A 348 1555 1555 2.06 LINK MG MG A 347 O HOH A 659 1555 1555 2.17 LINK MG MG A 347 O HOH A 660 1555 1555 2.22 LINK OE1 GLU B 89 MG MG B 345 1555 1555 2.14 LINK OD2 ASP B 110 MG MG B 345 1555 1555 2.34 LINK OD1 ASP B 110 MG MG B 346 1555 1555 1.97 LINK O LEU B 112 MG MG B 345 1555 1555 2.09 LINK OD1 ASP B 113 MG MG B 346 1555 1555 2.28 LINK OE1 GLU B 275 MG MG B 346 1555 1555 2.72 LINK O1P FBP B 342 MG MG B 345 1555 1555 1.98 LINK O1P FBP B 342 MG MG B 346 1555 1555 2.42 LINK O1 FBP B 342 MG MG B 346 1555 1555 2.11 LINK MG MG B 345 O HOH B 490 1555 1555 2.33 LINK MG MG B 345 O HOH B 657 1555 1555 2.34 CISPEP 1 ARG A 233 PRO A 234 0 0.27 CISPEP 2 ARG B 233 PRO B 234 0 0.23 CRYST1 124.640 124.640 132.280 90.00 90.00 90.00 P 41 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008023 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008023 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007560 0.00000 HETATM 1 N MSE A 1 113.647 32.161 20.580 1.00 47.54 N HETATM 2 CA MSE A 1 112.567 32.945 19.919 1.00 47.31 C HETATM 3 C MSE A 1 112.542 34.362 20.493 1.00 43.77 C HETATM 4 O MSE A 1 112.516 34.552 21.711 1.00 43.96 O HETATM 5 CB MSE A 1 111.219 32.249 20.138 1.00 52.58 C HETATM 6 CG MSE A 1 110.074 32.792 19.299 1.00 59.40 C HETATM 7 SE MSE A 1 109.333 34.437 19.981 1.00 72.61 SE HETATM 8 CE MSE A 1 108.045 33.682 21.220 1.00 65.12 C