HEADER METAL TRANSPORT 11-JUN-07 2Q8P TITLE CRYSTAL STRUCTURE OF SELENOMETHIONINE LABELLED S. AUREUS ISDE TITLE 2 COMPLEXED WITH HEME COMPND MOL_ID: 1; COMPND 2 MOLECULE: IRON-REGULATED SURFACE DETERMINANT E; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS SUBSP. AUREUS; SOURCE 3 ORGANISM_TAXID: 158879; SOURCE 4 STRAIN: N315; SOURCE 5 GENE: ISDE; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS HELICAL BACKBONE METAL RECEPTOR SUPERFAMILY, METAL TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR J.C.GRIGG,M.E.MURPHY REVDAT 5 18-OCT-17 2Q8P 1 REMARK REVDAT 4 13-JUL-11 2Q8P 1 VERSN REVDAT 3 24-FEB-09 2Q8P 1 VERSN REVDAT 2 09-OCT-07 2Q8P 1 JRNL REVDAT 1 31-JUL-07 2Q8P 0 JRNL AUTH J.C.GRIGG,C.L.VERMEIREN,D.E.HEINRICHS,M.E.MURPHY JRNL TITL HEME COORDINATION BY STAPHYLOCOCCUS AUREUS ISDE. JRNL REF J.BIOL.CHEM. V. 282 28815 2007 JRNL REFN ISSN 0021-9258 JRNL PMID 17666394 JRNL DOI 10.1074/JBC.M704602200 REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REFMAC_5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 84.6 REMARK 3 NUMBER OF REFLECTIONS : 17938 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.204 REMARK 3 R VALUE (WORKING SET) : 0.201 REMARK 3 FREE R VALUE : 0.263 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 963 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.95 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.02 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1235 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 80.02 REMARK 3 BIN R VALUE (WORKING SET) : 0.2620 REMARK 3 BIN FREE R VALUE SET COUNT : 59 REMARK 3 BIN FREE R VALUE : 0.4170 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2076 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 43 REMARK 3 SOLVENT ATOMS : 183 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.79 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.43000 REMARK 3 B22 (A**2) : 0.43000 REMARK 3 B33 (A**2) : -0.85000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.217 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.198 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.136 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.493 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.930 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2169 ; 0.013 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2939 ; 1.390 ; 2.041 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 257 ; 9.415 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 93 ;38.103 ;25.914 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 414 ;17.497 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 5 ;18.514 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 317 ; 0.096 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1601 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1035 ; 0.192 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1471 ; 0.303 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 167 ; 0.151 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 1 ; 0.037 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 19 ; 0.120 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 16 ; 0.206 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1336 ; 0.754 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2104 ; 1.072 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 949 ; 1.994 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 833 ; 2.772 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 32 A 67 REMARK 3 ORIGIN FOR THE GROUP (A): 68.2710 49.0430 59.8780 REMARK 3 T TENSOR REMARK 3 T11: 0.1389 T22: 0.0756 REMARK 3 T33: -0.0459 T12: -0.0103 REMARK 3 T13: -0.0529 T23: 0.0110 REMARK 3 L TENSOR REMARK 3 L11: 3.0288 L22: 2.7294 REMARK 3 L33: 4.1950 L12: 0.0619 REMARK 3 L13: 1.3196 L23: -0.2882 REMARK 3 S TENSOR REMARK 3 S11: -0.3029 S12: 0.0386 S13: 0.1318 REMARK 3 S21: -0.0368 S22: 0.0670 S23: -0.2829 REMARK 3 S31: -0.2654 S32: 0.5306 S33: 0.2360 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 68 A 149 REMARK 3 ORIGIN FOR THE GROUP (A): 69.3630 41.3810 56.0840 REMARK 3 T TENSOR REMARK 3 T11: 0.1050 T22: 0.0829 REMARK 3 T33: -0.0823 T12: 0.0616 REMARK 3 T13: 0.0109 T23: -0.0084 REMARK 3 L TENSOR REMARK 3 L11: 2.0160 L22: 2.3589 REMARK 3 L33: 3.0929 L12: 0.3154 REMARK 3 L13: 0.4343 L23: 0.0824 REMARK 3 S TENSOR REMARK 3 S11: -0.1520 S12: 0.2207 S13: -0.0982 REMARK 3 S21: -0.1756 S22: 0.0852 S23: -0.2561 REMARK 3 S31: 0.2092 S32: 0.5478 S33: 0.0667 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 150 A 187 REMARK 3 ORIGIN FOR THE GROUP (A): 45.2530 34.7860 58.1900 REMARK 3 T TENSOR REMARK 3 T11: 0.1677 T22: -0.0108 REMARK 3 T33: -0.0165 T12: 0.0299 REMARK 3 T13: 0.0477 T23: -0.0358 REMARK 3 L TENSOR REMARK 3 L11: 1.3527 L22: 1.2716 REMARK 3 L33: 3.3746 L12: 0.4443 REMARK 3 L13: 0.0495 L23: -0.1422 REMARK 3 S TENSOR REMARK 3 S11: -0.1714 S12: -0.0456 S13: -0.1674 REMARK 3 S21: 0.0793 S22: 0.0425 S23: 0.1587 REMARK 3 S31: 0.1211 S32: -0.2656 S33: 0.1289 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 188 A 212 REMARK 3 ORIGIN FOR THE GROUP (A): 47.6840 31.4590 51.2130 REMARK 3 T TENSOR REMARK 3 T11: 0.2343 T22: -0.0479 REMARK 3 T33: -0.0041 T12: -0.0103 REMARK 3 T13: 0.0361 T23: -0.0731 REMARK 3 L TENSOR REMARK 3 L11: 3.3365 L22: 0.8296 REMARK 3 L33: 3.6509 L12: 0.8368 REMARK 3 L13: 0.6206 L23: -1.3246 REMARK 3 S TENSOR REMARK 3 S11: -0.2208 S12: 0.1234 S13: -0.3629 REMARK 3 S21: 0.0112 S22: 0.0375 S23: 0.0627 REMARK 3 S31: 0.3194 S32: -0.0902 S33: 0.1832 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 213 A 229 REMARK 3 ORIGIN FOR THE GROUP (A): 40.5200 35.8250 46.9780 REMARK 3 T TENSOR REMARK 3 T11: 0.1406 T22: 0.1199 REMARK 3 T33: 0.0102 T12: -0.0305 REMARK 3 T13: -0.0534 T23: -0.0912 REMARK 3 L TENSOR REMARK 3 L11: 1.9749 L22: 2.1524 REMARK 3 L33: 2.0570 L12: 1.0062 REMARK 3 L13: -1.5932 L23: -0.6202 REMARK 3 S TENSOR REMARK 3 S11: -0.3026 S12: 0.6881 S13: -0.0526 REMARK 3 S21: -0.1003 S22: 0.2062 S23: 0.3533 REMARK 3 S31: -0.0357 S32: -0.4542 S33: 0.0964 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 230 A 289 REMARK 3 ORIGIN FOR THE GROUP (A): 41.6740 43.9270 51.6580 REMARK 3 T TENSOR REMARK 3 T11: 0.1597 T22: -0.0264 REMARK 3 T33: -0.0100 T12: 0.0453 REMARK 3 T13: -0.0180 T23: -0.0380 REMARK 3 L TENSOR REMARK 3 L11: 2.1602 L22: 1.7734 REMARK 3 L33: 3.7522 L12: 0.6919 REMARK 3 L13: 0.2656 L23: 0.0772 REMARK 3 S TENSOR REMARK 3 S11: -0.1605 S12: 0.1055 S13: 0.1970 REMARK 3 S21: -0.0172 S22: 0.0468 S23: 0.3320 REMARK 3 S31: -0.3097 S32: -0.3297 S33: 0.1137 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2Q8P COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-JUN-07. REMARK 100 THE DEPOSITION ID IS D_1000043289. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-FEB-07 REMARK 200 TEMPERATURE (KELVIN) : 77 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL11-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.978894 REMARK 200 MONOCHROMATOR : SIDE SCATTERING BENT CUBE-ROOT I REMARK 200 -BEAM SINGLE CRYSTAL, ASYMMETRIC REMARK 200 CUT 4.965 DEGS REMARK 200 OPTICS : FLAT MIRROR (VERTICAL FOCUSING), REMARK 200 SINGLE CRYSTAL SI(111) BENT REMARK 200 MONOCHROMATOR (HORIZONTAL REMARK 200 FOCUSING) REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19425 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 86.0 REMARK 200 DATA REDUNDANCY : 12.10 REMARK 200 R MERGE (I) : 0.06800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 30.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.02 REMARK 200 COMPLETENESS FOR SHELL (%) : 79.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.60 REMARK 200 R MERGE FOR SHELL (I) : 0.35900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SOLVE, RESOLVE 2.11 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.19 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.42 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50 MM MES, 0.2 M AMMONUIM ACETATE, 28% REMARK 280 PEG 4000, PH 5.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 72.12350 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 31.76350 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 31.76350 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 108.18525 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 31.76350 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 31.76350 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 36.06175 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 31.76350 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 31.76350 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 108.18525 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 31.76350 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 31.76350 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 36.06175 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 72.12350 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 30 REMARK 465 SER A 31 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 79 68.30 -150.00 REMARK 500 LYS A 89 65.49 39.32 REMARK 500 ARG A 138 37.99 -143.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 VAL A 266 PRO A 267 57.37 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 VAL A 266 11.20 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A 300 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 MSE A 78 SE REMARK 620 2 HEM A 300 NA 85.3 REMARK 620 3 HEM A 300 NB 85.5 90.5 REMARK 620 4 HEM A 300 NC 88.6 173.9 89.1 REMARK 620 5 HEM A 300 ND 91.3 89.9 176.7 90.1 REMARK 620 6 HIS A 229 NE2 176.6 97.6 92.8 88.5 90.4 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM A 300 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2Q8Q RELATED DB: PDB DBREF 2Q8P A 32 289 UNP Q7A652 Q7A652_STAAN 32 289 SEQADV 2Q8P GLY A 30 UNP Q7A652 EXPRESSION TAG SEQADV 2Q8P SER A 31 UNP Q7A652 EXPRESSION TAG SEQRES 1 A 260 GLY SER GLY GLU PHE ARG ILE VAL PRO THR THR VAL ALA SEQRES 2 A 260 LEU THR MSE THR LEU ASP LYS LEU ASP LEU PRO ILE VAL SEQRES 3 A 260 GLY LYS PRO THR SER TYR LYS THR LEU PRO ASN ARG TYR SEQRES 4 A 260 LYS ASP VAL PRO GLU ILE GLY GLN PRO MSE GLU PRO ASN SEQRES 5 A 260 VAL GLU ALA VAL LYS LYS LEU LYS PRO THR HIS VAL LEU SEQRES 6 A 260 SER VAL SER THR ILE LYS ASP GLU MSE GLN PRO PHE TYR SEQRES 7 A 260 LYS GLN LEU ASN MSE LYS GLY TYR PHE TYR ASP PHE ASP SEQRES 8 A 260 SER LEU LYS GLY MSE GLN LYS SER ILE THR GLN LEU GLY SEQRES 9 A 260 ASP GLN PHE ASN ARG LYS ALA GLN ALA LYS GLU LEU ASN SEQRES 10 A 260 ASP HIS LEU ASN SER VAL LYS GLN LYS ILE GLU ASN LYS SEQRES 11 A 260 ALA ALA LYS GLN LYS LYS HIS PRO LYS VAL LEU ILE LEU SEQRES 12 A 260 MSE GLY VAL PRO GLY SER TYR LEU VAL ALA THR ASP LYS SEQRES 13 A 260 SER TYR ILE GLY ASP LEU VAL LYS ILE ALA GLY GLY GLU SEQRES 14 A 260 ASN VAL ILE LYS VAL LYS ASP ARG GLN TYR ILE SER SER SEQRES 15 A 260 ASN THR GLU ASN LEU LEU ASN ILE ASN PRO ASP ILE ILE SEQRES 16 A 260 LEU ARG LEU PRO HIS GLY MSE PRO GLU GLU VAL LYS LYS SEQRES 17 A 260 MSE PHE GLN LYS GLU PHE LYS GLN ASN ASP ILE TRP LYS SEQRES 18 A 260 HIS PHE LYS ALA VAL LYS ASN ASN HIS VAL TYR ASP LEU SEQRES 19 A 260 GLU GLU VAL PRO PHE GLY ILE THR ALA ASN VAL ASP ALA SEQRES 20 A 260 ASP LYS ALA MSE THR GLN LEU TYR ASP LEU PHE TYR LYS MODRES 2Q8P MSE A 45 MET SELENOMETHIONINE MODRES 2Q8P MSE A 78 MET SELENOMETHIONINE MODRES 2Q8P MSE A 103 MET SELENOMETHIONINE MODRES 2Q8P MSE A 112 MET SELENOMETHIONINE MODRES 2Q8P MSE A 125 MET SELENOMETHIONINE MODRES 2Q8P MSE A 173 MET SELENOMETHIONINE MODRES 2Q8P MSE A 231 MET SELENOMETHIONINE MODRES 2Q8P MSE A 238 MET SELENOMETHIONINE MODRES 2Q8P MSE A 280 MET SELENOMETHIONINE HET MSE A 45 8 HET MSE A 78 8 HET MSE A 103 8 HET MSE A 112 8 HET MSE A 125 8 HET MSE A 173 8 HET MSE A 231 8 HET MSE A 238 8 HET MSE A 280 8 HET HEM A 300 43 HETNAM MSE SELENOMETHIONINE HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETSYN HEM HEME FORMUL 1 MSE 9(C5 H11 N O2 SE) FORMUL 2 HEM C34 H32 FE N4 O4 FORMUL 3 HOH *183(H2 O) HELIX 1 1 THR A 40 LEU A 50 1 11 HELIX 2 2 PRO A 65 LYS A 69 5 5 HELIX 3 3 ASN A 81 LEU A 88 1 8 HELIX 4 4 ILE A 99 ASN A 111 1 13 HELIX 5 5 SER A 121 PHE A 136 1 16 HELIX 6 6 ARG A 138 GLN A 163 1 26 HELIX 7 7 SER A 186 ALA A 195 1 10 HELIX 8 8 MSE A 231 ASN A 246 1 16 HELIX 9 9 ASP A 247 HIS A 251 5 5 HELIX 10 10 PHE A 252 ASN A 257 1 6 HELIX 11 11 ASP A 275 TYR A 288 1 14 SHEET 1 A 3 ILE A 36 PRO A 38 0 SHEET 2 A 3 HIS A 92 VAL A 96 1 O HIS A 92 N VAL A 37 SHEET 3 A 3 TYR A 115 TYR A 117 1 O TYR A 115 N SER A 95 SHEET 1 B 4 GLU A 198 ASN A 199 0 SHEET 2 B 4 LYS A 168 VAL A 175 1 N VAL A 169 O GLU A 198 SHEET 3 B 4 SER A 178 ALA A 182 -1 O SER A 178 N VAL A 175 SHEET 4 B 4 TYR A 208 SER A 210 -1 O ILE A 209 N VAL A 181 SHEET 1 C 4 GLU A 198 ASN A 199 0 SHEET 2 C 4 LYS A 168 VAL A 175 1 N VAL A 169 O GLU A 198 SHEET 3 C 4 ILE A 223 PRO A 228 1 O LEU A 227 N GLY A 174 SHEET 4 C 4 VAL A 260 ASP A 262 1 O TYR A 261 N ARG A 226 LINK SE MSE A 78 FE HEM A 300 1555 1555 2.49 LINK NE2 HIS A 229 FE HEM A 300 1555 1555 1.96 LINK C THR A 44 N MSE A 45 1555 1555 1.33 LINK C MSE A 45 N THR A 46 1555 1555 1.34 LINK C PRO A 77 N MSE A 78 1555 1555 1.32 LINK C MSE A 78 N GLU A 79 1555 1555 1.33 LINK C GLU A 102 N MSE A 103 1555 1555 1.33 LINK C MSE A 103 N GLN A 104 1555 1555 1.34 LINK C ASN A 111 N MSE A 112 1555 1555 1.33 LINK C MSE A 112 N LYS A 113 1555 1555 1.33 LINK C GLY A 124 N MSE A 125 1555 1555 1.33 LINK C MSE A 125 N GLN A 126 1555 1555 1.33 LINK C LEU A 172 N MSE A 173 1555 1555 1.33 LINK C MSE A 173 N GLY A 174 1555 1555 1.33 LINK C GLY A 230 N MSE A 231 1555 1555 1.33 LINK C MSE A 231 N PRO A 232 1555 1555 1.35 LINK C LYS A 237 N MSE A 238 1555 1555 1.33 LINK C MSE A 238 N PHE A 239 1555 1555 1.34 LINK C ALA A 279 N MSE A 280 1555 1555 1.34 LINK C MSE A 280 N THR A 281 1555 1555 1.32 SITE 1 AC1 21 THR A 40 VAL A 41 ALA A 42 SER A 60 SITE 2 AC1 21 TYR A 61 GLN A 76 PRO A 77 MSE A 78 SITE 3 AC1 21 THR A 98 ILE A 99 VAL A 175 PRO A 176 SITE 4 AC1 21 TYR A 208 HIS A 229 GLY A 230 ILE A 270 SITE 5 AC1 21 THR A 271 HOH A 307 HOH A 313 HOH A 316 SITE 6 AC1 21 HOH A 376 CRYST1 63.527 63.527 144.247 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015741 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015741 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006933 0.00000