data_2QCM # _entry.id 2QCM # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.350 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2QCM pdb_00002qcm 10.2210/pdb2qcm/pdb RCSB RCSB043430 ? ? WWPDB D_1000043430 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2v30 . unspecified PDB 2jgy . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2QCM _pdbx_database_status.recvd_initial_deposition_date 2007-06-19 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Wittmann, J.' 1 'Rudolph, M.' 2 # _citation.id primary _citation.title ;Structures of the human orotidine-5'-monophosphate decarboxylase support a covalent mechanism and provide a framework for drug design. ; _citation.journal_abbrev Structure _citation.journal_volume 16 _citation.page_first 82 _citation.page_last 92 _citation.year 2008 _citation.journal_id_ASTM STRUE6 _citation.country UK _citation.journal_id_ISSN 0969-2126 _citation.journal_id_CSD 2005 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 18184586 _citation.pdbx_database_id_DOI 10.1016/j.str.2007.10.020 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Wittmann, J.G.' 1 ? primary 'Heinrich, D.' 2 ? primary 'Gasow, K.' 3 ? primary 'Frey, A.' 4 ? primary 'Diederichsen, U.' 5 ? primary 'Rudolph, M.G.' 6 ? # _cell.entry_id 2QCM _cell.length_a 77.378 _cell.length_b 116.607 _cell.length_c 61.910 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2QCM _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man ;Uridine 5'-monophosphate synthase (UMP synthase) ; 28330.824 1 4.1.1.23 ? 'C-terminal domain' ? 2 non-polymer syn ;6-(HYDROXYMETHYL)URIDINE 5'-(DIHYDROGEN PHOSPHATE) ; 354.207 1 ? ? ? ? 3 water nat water 18.015 309 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GAMELSFGARAELPRIHPVASKLLRLMQKKETNLCLSADVSLARELLQLADALGPSICMLKTHVDILNDFTLDVMKELIT LAK(CSS)HEFLIFENRKFADIGNTVKKQYEGGIFKIASWADLVNAHVVPGSGVVKGLQEVGLPLHRGCLLIAEMSSTGS LATGDYTRAAVRMAEEHSEFVVGFISGSRVSMKPEFLHLTPGVQLEAGGDNLGQQYNSPQEVIGKRGSDIIIVGRGIISA ADRLEAAEMYRKAAWEAYLSRLGV ; _entity_poly.pdbx_seq_one_letter_code_can ;GAMELSFGARAELPRIHPVASKLLRLMQKKETNLCLSADVSLARELLQLADALGPSICMLKTHVDILNDFTLDVMKELIT LAKCHEFLIFENRKFADIGNTVKKQYEGGIFKIASWADLVNAHVVPGSGVVKGLQEVGLPLHRGCLLIAEMSSTGSLATG DYTRAAVRMAEEHSEFVVGFISGSRVSMKPEFLHLTPGVQLEAGGDNLGQQYNSPQEVIGKRGSDIIIVGRGIISAADRL EAAEMYRKAAWEAYLSRLGV ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ALA n 1 3 MET n 1 4 GLU n 1 5 LEU n 1 6 SER n 1 7 PHE n 1 8 GLY n 1 9 ALA n 1 10 ARG n 1 11 ALA n 1 12 GLU n 1 13 LEU n 1 14 PRO n 1 15 ARG n 1 16 ILE n 1 17 HIS n 1 18 PRO n 1 19 VAL n 1 20 ALA n 1 21 SER n 1 22 LYS n 1 23 LEU n 1 24 LEU n 1 25 ARG n 1 26 LEU n 1 27 MET n 1 28 GLN n 1 29 LYS n 1 30 LYS n 1 31 GLU n 1 32 THR n 1 33 ASN n 1 34 LEU n 1 35 CYS n 1 36 LEU n 1 37 SER n 1 38 ALA n 1 39 ASP n 1 40 VAL n 1 41 SER n 1 42 LEU n 1 43 ALA n 1 44 ARG n 1 45 GLU n 1 46 LEU n 1 47 LEU n 1 48 GLN n 1 49 LEU n 1 50 ALA n 1 51 ASP n 1 52 ALA n 1 53 LEU n 1 54 GLY n 1 55 PRO n 1 56 SER n 1 57 ILE n 1 58 CYS n 1 59 MET n 1 60 LEU n 1 61 LYS n 1 62 THR n 1 63 HIS n 1 64 VAL n 1 65 ASP n 1 66 ILE n 1 67 LEU n 1 68 ASN n 1 69 ASP n 1 70 PHE n 1 71 THR n 1 72 LEU n 1 73 ASP n 1 74 VAL n 1 75 MET n 1 76 LYS n 1 77 GLU n 1 78 LEU n 1 79 ILE n 1 80 THR n 1 81 LEU n 1 82 ALA n 1 83 LYS n 1 84 CSS n 1 85 HIS n 1 86 GLU n 1 87 PHE n 1 88 LEU n 1 89 ILE n 1 90 PHE n 1 91 GLU n 1 92 ASN n 1 93 ARG n 1 94 LYS n 1 95 PHE n 1 96 ALA n 1 97 ASP n 1 98 ILE n 1 99 GLY n 1 100 ASN n 1 101 THR n 1 102 VAL n 1 103 LYS n 1 104 LYS n 1 105 GLN n 1 106 TYR n 1 107 GLU n 1 108 GLY n 1 109 GLY n 1 110 ILE n 1 111 PHE n 1 112 LYS n 1 113 ILE n 1 114 ALA n 1 115 SER n 1 116 TRP n 1 117 ALA n 1 118 ASP n 1 119 LEU n 1 120 VAL n 1 121 ASN n 1 122 ALA n 1 123 HIS n 1 124 VAL n 1 125 VAL n 1 126 PRO n 1 127 GLY n 1 128 SER n 1 129 GLY n 1 130 VAL n 1 131 VAL n 1 132 LYS n 1 133 GLY n 1 134 LEU n 1 135 GLN n 1 136 GLU n 1 137 VAL n 1 138 GLY n 1 139 LEU n 1 140 PRO n 1 141 LEU n 1 142 HIS n 1 143 ARG n 1 144 GLY n 1 145 CYS n 1 146 LEU n 1 147 LEU n 1 148 ILE n 1 149 ALA n 1 150 GLU n 1 151 MET n 1 152 SER n 1 153 SER n 1 154 THR n 1 155 GLY n 1 156 SER n 1 157 LEU n 1 158 ALA n 1 159 THR n 1 160 GLY n 1 161 ASP n 1 162 TYR n 1 163 THR n 1 164 ARG n 1 165 ALA n 1 166 ALA n 1 167 VAL n 1 168 ARG n 1 169 MET n 1 170 ALA n 1 171 GLU n 1 172 GLU n 1 173 HIS n 1 174 SER n 1 175 GLU n 1 176 PHE n 1 177 VAL n 1 178 VAL n 1 179 GLY n 1 180 PHE n 1 181 ILE n 1 182 SER n 1 183 GLY n 1 184 SER n 1 185 ARG n 1 186 VAL n 1 187 SER n 1 188 MET n 1 189 LYS n 1 190 PRO n 1 191 GLU n 1 192 PHE n 1 193 LEU n 1 194 HIS n 1 195 LEU n 1 196 THR n 1 197 PRO n 1 198 GLY n 1 199 VAL n 1 200 GLN n 1 201 LEU n 1 202 GLU n 1 203 ALA n 1 204 GLY n 1 205 GLY n 1 206 ASP n 1 207 ASN n 1 208 LEU n 1 209 GLY n 1 210 GLN n 1 211 GLN n 1 212 TYR n 1 213 ASN n 1 214 SER n 1 215 PRO n 1 216 GLN n 1 217 GLU n 1 218 VAL n 1 219 ILE n 1 220 GLY n 1 221 LYS n 1 222 ARG n 1 223 GLY n 1 224 SER n 1 225 ASP n 1 226 ILE n 1 227 ILE n 1 228 ILE n 1 229 VAL n 1 230 GLY n 1 231 ARG n 1 232 GLY n 1 233 ILE n 1 234 ILE n 1 235 SER n 1 236 ALA n 1 237 ALA n 1 238 ASP n 1 239 ARG n 1 240 LEU n 1 241 GLU n 1 242 ALA n 1 243 ALA n 1 244 GLU n 1 245 MET n 1 246 TYR n 1 247 ARG n 1 248 LYS n 1 249 ALA n 1 250 ALA n 1 251 TRP n 1 252 GLU n 1 253 ALA n 1 254 TYR n 1 255 LEU n 1 256 SER n 1 257 ARG n 1 258 LEU n 1 259 GLY n 1 260 VAL n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene UMPS _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 Rosetta 2(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pETM-30 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code PYR5_HUMAN _struct_ref.pdbx_db_accession P11172 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;ELSFGARAELPRIHPVASKLLRLMQKKETNLCLSADVSLARELLQLADALGPSICMLKTHVDILNDFTLDVMKELITLAK CHEFLIFEDRKFADIGNTVKKQYEGGIFKIASWADLVNAHVVPGSGVVKGLQEVGLPLHRGCLLIAEMSSTGSLATGDYT RAAVRMAEEHSEFVVGFISGSRVSMKPEFLHLTPGVQLEAGGDNLGQQYNSPQEVIGKRGSDIIIVGRGIISAADRLEAA EMYRKAAWEAYLSRLGV ; _struct_ref.pdbx_align_begin 224 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2QCM _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 260 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P11172 _struct_ref_seq.db_align_beg 224 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 480 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 224 _struct_ref_seq.pdbx_auth_seq_align_end 480 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2QCM GLY A 1 ? UNP P11172 ? ? 'expression tag' 221 1 1 2QCM ALA A 2 ? UNP P11172 ? ? 'expression tag' 222 2 1 2QCM MET A 3 ? UNP P11172 ? ? 'expression tag' 223 3 1 2QCM ASN A 92 ? UNP P11172 ASP 312 'engineered mutation' 312 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CSS 'L-peptide linking' n S-MERCAPTOCYSTEINE ? 'C3 H7 N O2 S2' 153.223 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 JW5 'RNA linking' . ;6-(HYDROXYMETHYL)URIDINE 5'-(DIHYDROGEN PHOSPHATE) ; ? 'C10 H15 N2 O10 P' 354.207 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2QCM _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.47 _exptl_crystal.density_percent_sol 50.14 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.pdbx_details 'pH 8.0, VAPOR DIFFUSION, SITTING DROP, temperature 295K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'MAR scanner 345 mm plate' _diffrn_detector.pdbx_collection_date 2006-04-13 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5419 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU MICROMAX-007' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5419 # _reflns.entry_id 2QCM _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I 0 _reflns.d_resolution_high 1.66 _reflns.d_resolution_low 32.24 _reflns.number_all ? _reflns.number_obs 32717 _reflns.percent_possible_obs 97.3 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.050 _reflns.pdbx_netI_over_sigmaI 26 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 4.6 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.66 _reflns_shell.d_res_low 1.72 _reflns_shell.percent_possible_all 73.9 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.243 _reflns_shell.meanI_over_sigI_obs 4.3 _reflns_shell.pdbx_redundancy 3.5 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 2466 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 2QCM _refine.ls_number_reflns_obs 31057 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 32.24 _refine.ls_d_res_high 1.67 _refine.ls_percent_reflns_obs 98.62 _refine.ls_R_factor_obs 0.14213 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.14123 _refine.ls_R_factor_R_free 0.15927 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 1640 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.972 _refine.correlation_coeff_Fo_to_Fc_free 0.967 _refine.B_iso_mean 20.580 _refine.aniso_B[1][1] 1.98 _refine.aniso_B[2][2] -0.90 _refine.aniso_B[3][3] -1.08 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ;HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. The atoms that are in close contact have occupancy less than 1 and are mutually exclusive. ; _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.082 _refine.pdbx_overall_ESU_R_Free 0.076 _refine.overall_SU_ML 0.049 _refine.overall_SU_B 1.426 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2125 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 24 _refine_hist.number_atoms_solvent 309 _refine_hist.number_atoms_total 2458 _refine_hist.d_res_high 1.67 _refine_hist.d_res_low 32.24 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.012 0.022 ? 2209 'X-RAY DIFFRACTION' ? r_bond_other_d 0.002 0.020 ? 1536 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.421 2.005 ? 3023 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.919 3.000 ? 3797 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.744 5.000 ? 309 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 33.345 24.062 ? 96 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 13.073 15.000 ? 425 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 17.262 15.000 ? 17 'X-RAY DIFFRACTION' ? r_chiral_restr 0.082 0.200 ? 349 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.005 0.020 ? 2479 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 434 'X-RAY DIFFRACTION' ? r_nbd_refined 0.226 0.200 ? 462 'X-RAY DIFFRACTION' ? r_nbd_other 0.206 0.200 ? 1674 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.177 0.200 ? 1071 'X-RAY DIFFRACTION' ? r_nbtor_other 0.083 0.200 ? 1162 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.126 0.200 ? 239 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.185 0.200 ? 16 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 0.321 0.200 ? 46 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.166 0.200 ? 34 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.142 1.500 ? 1808 'X-RAY DIFFRACTION' ? r_mcbond_other 0.205 1.500 ? 556 'X-RAY DIFFRACTION' ? r_mcangle_it 1.113 2.000 ? 2203 'X-RAY DIFFRACTION' ? r_scbond_it 2.191 3.000 ? 954 'X-RAY DIFFRACTION' ? r_scangle_it 3.208 4.500 ? 792 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.67 _refine_ls_shell.d_res_low 1.71 _refine_ls_shell.number_reflns_R_work 1929 _refine_ls_shell.R_factor_R_work 0.191 _refine_ls_shell.percent_reflns_obs 83.84 _refine_ls_shell.R_factor_R_free 0.196 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 105 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2QCM _struct.title ;Crystal structure of the orotidine-5'-monophosphate decarboxylase domain (Asp312Asn mutant) of human UMP synthase bound to 6-hydroxymethyl-UMP ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2QCM _struct_keywords.pdbx_keywords LYASE _struct_keywords.text 'UMP synthase, decarboxylase, catalytic proficiency, Lyase' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 6 ? ALA A 11 ? SER A 226 ALA A 231 1 ? 6 HELX_P HELX_P2 2 HIS A 17 ? GLU A 31 ? HIS A 237 GLU A 251 1 ? 15 HELX_P HELX_P3 3 LEU A 42 ? GLY A 54 ? LEU A 262 GLY A 274 1 ? 13 HELX_P HELX_P4 4 PRO A 55 ? ILE A 57 ? PRO A 275 ILE A 277 5 ? 3 HELX_P HELX_P5 5 HIS A 63 ? LEU A 67 ? HIS A 283 LEU A 287 5 ? 5 HELX_P HELX_P6 6 THR A 71 ? GLU A 86 ? THR A 291 GLU A 306 1 ? 16 HELX_P HELX_P7 7 ILE A 98 ? GLY A 108 ? ILE A 318 GLY A 328 1 ? 11 HELX_P HELX_P8 8 LYS A 112 ? ALA A 117 ? LYS A 332 ALA A 337 1 ? 6 HELX_P HELX_P9 9 SER A 128 ? LEU A 139 ? SER A 348 LEU A 359 1 ? 12 HELX_P HELX_P10 10 THR A 159 ? GLU A 172 ? THR A 379 GLU A 392 1 ? 14 HELX_P HELX_P11 11 SER A 214 ? GLY A 220 ? SER A 434 GLY A 440 1 ? 7 HELX_P HELX_P12 12 GLY A 230 ? SER A 235 ? GLY A 450 SER A 455 1 ? 6 HELX_P HELX_P13 13 ASP A 238 ? GLY A 259 ? ASP A 458 GLY A 479 1 ? 22 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A LYS 83 C ? ? ? 1_555 A CSS 84 N ? ? A LYS 303 A CSS 304 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale2 covale both ? A CSS 84 C ? ? ? 1_555 A HIS 85 N ? ? A CSS 304 A HIS 305 1_555 ? ? ? ? ? ? ? 1.330 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 9 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel A 6 7 ? parallel A 7 8 ? parallel A 8 9 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 34 ? SER A 37 ? LEU A 254 SER A 257 A 2 MET A 59 ? THR A 62 ? MET A 279 THR A 282 A 3 LEU A 88 ? PHE A 95 ? LEU A 308 PHE A 315 A 4 LEU A 119 ? HIS A 123 ? LEU A 339 HIS A 343 A 5 GLY A 144 ? ILE A 148 ? GLY A 364 ILE A 368 A 6 VAL A 177 ? ILE A 181 ? VAL A 397 ILE A 401 A 7 LEU A 193 ? THR A 196 ? LEU A 413 THR A 416 A 8 ILE A 226 ? VAL A 229 ? ILE A 446 VAL A 449 A 9 LEU A 34 ? SER A 37 ? LEU A 254 SER A 257 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 36 ? N LEU A 256 O LYS A 61 ? O LYS A 281 A 2 3 N THR A 62 ? N THR A 282 O ASN A 92 ? O ASN A 312 A 3 4 N PHE A 95 ? N PHE A 315 O HIS A 123 ? O HIS A 343 A 4 5 N ALA A 122 ? N ALA A 342 O ILE A 148 ? O ILE A 368 A 5 6 N CYS A 145 ? N CYS A 365 O VAL A 178 ? O VAL A 398 A 6 7 N PHE A 180 ? N PHE A 400 O LEU A 193 ? O LEU A 413 A 7 8 N THR A 196 ? N THR A 416 O ILE A 228 ? O ILE A 448 A 8 9 O ILE A 227 ? O ILE A 447 N CYS A 35 ? N CYS A 255 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id JW5 _struct_site.pdbx_auth_seq_id 482 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 20 _struct_site.details 'BINDING SITE FOR RESIDUE JW5 A 482' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 20 SER A 37 ? SER A 257 . ? 1_555 ? 2 AC1 20 ASP A 39 ? ASP A 259 . ? 1_555 ? 3 AC1 20 LYS A 61 ? LYS A 281 . ? 1_555 ? 4 AC1 20 HIS A 63 ? HIS A 283 . ? 1_555 ? 5 AC1 20 ASN A 92 ? ASN A 312 . ? 1_555 ? 6 AC1 20 ASP A 97 ? ASP A 317 . ? 4_556 ? 7 AC1 20 ILE A 98 ? ILE A 318 . ? 4_556 ? 8 AC1 20 THR A 101 ? THR A 321 . ? 4_556 ? 9 AC1 20 ASN A 121 ? ASN A 341 . ? 1_555 ? 10 AC1 20 MET A 151 ? MET A 371 . ? 1_555 ? 11 AC1 20 SER A 152 ? SER A 372 . ? 1_555 ? 12 AC1 20 ILE A 181 ? ILE A 401 . ? 1_555 ? 13 AC1 20 PRO A 197 ? PRO A 417 . ? 1_555 ? 14 AC1 20 GLN A 210 ? GLN A 430 . ? 1_555 ? 15 AC1 20 TYR A 212 ? TYR A 432 . ? 1_555 ? 16 AC1 20 GLY A 230 ? GLY A 450 . ? 1_555 ? 17 AC1 20 ARG A 231 ? ARG A 451 . ? 1_555 ? 18 AC1 20 HOH C . ? HOH A 488 . ? 1_555 ? 19 AC1 20 HOH C . ? HOH A 494 . ? 1_555 ? 20 AC1 20 HOH C . ? HOH A 530 . ? 1_555 ? # _database_PDB_matrix.entry_id 2QCM _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2QCM _atom_sites.fract_transf_matrix[1][1] 0.012924 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.008576 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.016152 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 221 ? ? ? A . n A 1 2 ALA 2 222 ? ? ? A . n A 1 3 MET 3 223 223 MET MET A . n A 1 4 GLU 4 224 224 GLU GLU A . n A 1 5 LEU 5 225 225 LEU LEU A . n A 1 6 SER 6 226 226 SER SER A . n A 1 7 PHE 7 227 227 PHE PHE A . n A 1 8 GLY 8 228 228 GLY GLY A . n A 1 9 ALA 9 229 229 ALA ALA A . n A 1 10 ARG 10 230 230 ARG ARG A . n A 1 11 ALA 11 231 231 ALA ALA A . n A 1 12 GLU 12 232 232 GLU GLU A . n A 1 13 LEU 13 233 233 LEU LEU A . n A 1 14 PRO 14 234 234 PRO PRO A . n A 1 15 ARG 15 235 235 ARG ARG A . n A 1 16 ILE 16 236 236 ILE ILE A . n A 1 17 HIS 17 237 237 HIS HIS A . n A 1 18 PRO 18 238 238 PRO PRO A . n A 1 19 VAL 19 239 239 VAL VAL A . n A 1 20 ALA 20 240 240 ALA ALA A . n A 1 21 SER 21 241 241 SER SER A . n A 1 22 LYS 22 242 242 LYS LYS A . n A 1 23 LEU 23 243 243 LEU LEU A . n A 1 24 LEU 24 244 244 LEU LEU A . n A 1 25 ARG 25 245 245 ARG ARG A . n A 1 26 LEU 26 246 246 LEU LEU A . n A 1 27 MET 27 247 247 MET MET A . n A 1 28 GLN 28 248 248 GLN GLN A . n A 1 29 LYS 29 249 249 LYS LYS A . n A 1 30 LYS 30 250 250 LYS LYS A . n A 1 31 GLU 31 251 251 GLU GLU A . n A 1 32 THR 32 252 252 THR THR A . n A 1 33 ASN 33 253 253 ASN ASN A . n A 1 34 LEU 34 254 254 LEU LEU A . n A 1 35 CYS 35 255 255 CYS CYS A . n A 1 36 LEU 36 256 256 LEU LEU A . n A 1 37 SER 37 257 257 SER SER A . n A 1 38 ALA 38 258 258 ALA ALA A . n A 1 39 ASP 39 259 259 ASP ASP A . n A 1 40 VAL 40 260 260 VAL VAL A . n A 1 41 SER 41 261 261 SER SER A . n A 1 42 LEU 42 262 262 LEU LEU A . n A 1 43 ALA 43 263 263 ALA ALA A . n A 1 44 ARG 44 264 264 ARG ARG A . n A 1 45 GLU 45 265 265 GLU GLU A . n A 1 46 LEU 46 266 266 LEU LEU A . n A 1 47 LEU 47 267 267 LEU LEU A . n A 1 48 GLN 48 268 268 GLN GLN A . n A 1 49 LEU 49 269 269 LEU LEU A . n A 1 50 ALA 50 270 270 ALA ALA A . n A 1 51 ASP 51 271 271 ASP ASP A . n A 1 52 ALA 52 272 272 ALA ALA A . n A 1 53 LEU 53 273 273 LEU LEU A . n A 1 54 GLY 54 274 274 GLY GLY A . n A 1 55 PRO 55 275 275 PRO PRO A . n A 1 56 SER 56 276 276 SER SER A . n A 1 57 ILE 57 277 277 ILE ILE A . n A 1 58 CYS 58 278 278 CYS CYS A . n A 1 59 MET 59 279 279 MET MET A . n A 1 60 LEU 60 280 280 LEU LEU A . n A 1 61 LYS 61 281 281 LYS LYS A . n A 1 62 THR 62 282 282 THR THR A . n A 1 63 HIS 63 283 283 HIS HIS A . n A 1 64 VAL 64 284 284 VAL VAL A . n A 1 65 ASP 65 285 285 ASP ASP A . n A 1 66 ILE 66 286 286 ILE ILE A . n A 1 67 LEU 67 287 287 LEU LEU A . n A 1 68 ASN 68 288 288 ASN ASN A . n A 1 69 ASP 69 289 289 ASP ASP A . n A 1 70 PHE 70 290 290 PHE PHE A . n A 1 71 THR 71 291 291 THR THR A . n A 1 72 LEU 72 292 292 LEU LEU A . n A 1 73 ASP 73 293 293 ASP ASP A . n A 1 74 VAL 74 294 294 VAL VAL A . n A 1 75 MET 75 295 295 MET MET A . n A 1 76 LYS 76 296 296 LYS LYS A . n A 1 77 GLU 77 297 297 GLU GLU A . n A 1 78 LEU 78 298 298 LEU LEU A . n A 1 79 ILE 79 299 299 ILE ILE A . n A 1 80 THR 80 300 300 THR THR A . n A 1 81 LEU 81 301 301 LEU LEU A . n A 1 82 ALA 82 302 302 ALA ALA A . n A 1 83 LYS 83 303 303 LYS LYS A . n A 1 84 CSS 84 304 304 CSS CSS A . n A 1 85 HIS 85 305 305 HIS HIS A . n A 1 86 GLU 86 306 306 GLU GLU A . n A 1 87 PHE 87 307 307 PHE PHE A . n A 1 88 LEU 88 308 308 LEU LEU A . n A 1 89 ILE 89 309 309 ILE ILE A . n A 1 90 PHE 90 310 310 PHE PHE A . n A 1 91 GLU 91 311 311 GLU GLU A . n A 1 92 ASN 92 312 312 ASN ASN A . n A 1 93 ARG 93 313 313 ARG ARG A . n A 1 94 LYS 94 314 314 LYS LYS A . n A 1 95 PHE 95 315 315 PHE PHE A . n A 1 96 ALA 96 316 316 ALA ALA A . n A 1 97 ASP 97 317 317 ASP ASP A . n A 1 98 ILE 98 318 318 ILE ILE A . n A 1 99 GLY 99 319 319 GLY GLY A . n A 1 100 ASN 100 320 320 ASN ASN A . n A 1 101 THR 101 321 321 THR THR A . n A 1 102 VAL 102 322 322 VAL VAL A . n A 1 103 LYS 103 323 323 LYS LYS A . n A 1 104 LYS 104 324 324 LYS LYS A . n A 1 105 GLN 105 325 325 GLN GLN A . n A 1 106 TYR 106 326 326 TYR TYR A . n A 1 107 GLU 107 327 327 GLU GLU A . n A 1 108 GLY 108 328 328 GLY GLY A . n A 1 109 GLY 109 329 329 GLY GLY A . n A 1 110 ILE 110 330 330 ILE ILE A . n A 1 111 PHE 111 331 331 PHE PHE A . n A 1 112 LYS 112 332 332 LYS LYS A . n A 1 113 ILE 113 333 333 ILE ILE A . n A 1 114 ALA 114 334 334 ALA ALA A . n A 1 115 SER 115 335 335 SER SER A . n A 1 116 TRP 116 336 336 TRP TRP A . n A 1 117 ALA 117 337 337 ALA ALA A . n A 1 118 ASP 118 338 338 ASP ASP A . n A 1 119 LEU 119 339 339 LEU LEU A . n A 1 120 VAL 120 340 340 VAL VAL A . n A 1 121 ASN 121 341 341 ASN ASN A . n A 1 122 ALA 122 342 342 ALA ALA A . n A 1 123 HIS 123 343 343 HIS HIS A . n A 1 124 VAL 124 344 344 VAL VAL A . n A 1 125 VAL 125 345 345 VAL VAL A . n A 1 126 PRO 126 346 346 PRO PRO A . n A 1 127 GLY 127 347 347 GLY GLY A . n A 1 128 SER 128 348 348 SER SER A . n A 1 129 GLY 129 349 349 GLY GLY A . n A 1 130 VAL 130 350 350 VAL VAL A . n A 1 131 VAL 131 351 351 VAL VAL A . n A 1 132 LYS 132 352 352 LYS LYS A . n A 1 133 GLY 133 353 353 GLY GLY A . n A 1 134 LEU 134 354 354 LEU LEU A . n A 1 135 GLN 135 355 355 GLN GLN A . n A 1 136 GLU 136 356 356 GLU GLU A . n A 1 137 VAL 137 357 357 VAL VAL A . n A 1 138 GLY 138 358 358 GLY GLY A . n A 1 139 LEU 139 359 359 LEU LEU A . n A 1 140 PRO 140 360 360 PRO PRO A . n A 1 141 LEU 141 361 361 LEU LEU A . n A 1 142 HIS 142 362 362 HIS HIS A . n A 1 143 ARG 143 363 363 ARG ARG A . n A 1 144 GLY 144 364 364 GLY GLY A . n A 1 145 CYS 145 365 365 CYS CYS A . n A 1 146 LEU 146 366 366 LEU LEU A . n A 1 147 LEU 147 367 367 LEU LEU A . n A 1 148 ILE 148 368 368 ILE ILE A . n A 1 149 ALA 149 369 369 ALA ALA A . n A 1 150 GLU 150 370 370 GLU GLU A . n A 1 151 MET 151 371 371 MET MET A . n A 1 152 SER 152 372 372 SER SER A . n A 1 153 SER 153 373 373 SER SER A . n A 1 154 THR 154 374 374 THR THR A . n A 1 155 GLY 155 375 375 GLY GLY A . n A 1 156 SER 156 376 376 SER SER A . n A 1 157 LEU 157 377 377 LEU LEU A . n A 1 158 ALA 158 378 378 ALA ALA A . n A 1 159 THR 159 379 379 THR THR A . n A 1 160 GLY 160 380 380 GLY GLY A . n A 1 161 ASP 161 381 381 ASP ASP A . n A 1 162 TYR 162 382 382 TYR TYR A . n A 1 163 THR 163 383 383 THR THR A . n A 1 164 ARG 164 384 384 ARG ARG A . n A 1 165 ALA 165 385 385 ALA ALA A . n A 1 166 ALA 166 386 386 ALA ALA A . n A 1 167 VAL 167 387 387 VAL VAL A . n A 1 168 ARG 168 388 388 ARG ARG A . n A 1 169 MET 169 389 389 MET MET A . n A 1 170 ALA 170 390 390 ALA ALA A . n A 1 171 GLU 171 391 391 GLU GLU A . n A 1 172 GLU 172 392 392 GLU GLU A . n A 1 173 HIS 173 393 393 HIS HIS A . n A 1 174 SER 174 394 394 SER SER A . n A 1 175 GLU 175 395 395 GLU GLU A . n A 1 176 PHE 176 396 396 PHE PHE A . n A 1 177 VAL 177 397 397 VAL VAL A . n A 1 178 VAL 178 398 398 VAL VAL A . n A 1 179 GLY 179 399 399 GLY GLY A . n A 1 180 PHE 180 400 400 PHE PHE A . n A 1 181 ILE 181 401 401 ILE ILE A . n A 1 182 SER 182 402 402 SER SER A . n A 1 183 GLY 183 403 403 GLY GLY A . n A 1 184 SER 184 404 404 SER SER A . n A 1 185 ARG 185 405 405 ARG ARG A . n A 1 186 VAL 186 406 406 VAL VAL A . n A 1 187 SER 187 407 407 SER SER A . n A 1 188 MET 188 408 408 MET MET A . n A 1 189 LYS 189 409 409 LYS LYS A . n A 1 190 PRO 190 410 410 PRO PRO A . n A 1 191 GLU 191 411 411 GLU GLU A . n A 1 192 PHE 192 412 412 PHE PHE A . n A 1 193 LEU 193 413 413 LEU LEU A . n A 1 194 HIS 194 414 414 HIS HIS A . n A 1 195 LEU 195 415 415 LEU LEU A . n A 1 196 THR 196 416 416 THR THR A . n A 1 197 PRO 197 417 417 PRO PRO A . n A 1 198 GLY 198 418 418 GLY GLY A . n A 1 199 VAL 199 419 419 VAL VAL A . n A 1 200 GLN 200 420 420 GLN GLN A . n A 1 201 LEU 201 421 421 LEU LEU A . n A 1 202 GLU 202 422 422 GLU GLU A . n A 1 203 ALA 203 423 423 ALA ALA A . n A 1 204 GLY 204 424 424 GLY GLY A . n A 1 205 GLY 205 425 425 GLY GLY A . n A 1 206 ASP 206 426 426 ASP ASP A . n A 1 207 ASN 207 427 427 ASN ASN A . n A 1 208 LEU 208 428 428 LEU LEU A . n A 1 209 GLY 209 429 429 GLY GLY A . n A 1 210 GLN 210 430 430 GLN GLN A . n A 1 211 GLN 211 431 431 GLN GLN A . n A 1 212 TYR 212 432 432 TYR TYR A . n A 1 213 ASN 213 433 433 ASN ASN A . n A 1 214 SER 214 434 434 SER SER A . n A 1 215 PRO 215 435 435 PRO PRO A . n A 1 216 GLN 216 436 436 GLN GLN A . n A 1 217 GLU 217 437 437 GLU GLU A . n A 1 218 VAL 218 438 438 VAL VAL A . n A 1 219 ILE 219 439 439 ILE ILE A . n A 1 220 GLY 220 440 440 GLY GLY A . n A 1 221 LYS 221 441 441 LYS LYS A . n A 1 222 ARG 222 442 442 ARG ARG A . n A 1 223 GLY 223 443 443 GLY GLY A . n A 1 224 SER 224 444 444 SER SER A . n A 1 225 ASP 225 445 445 ASP ASP A . n A 1 226 ILE 226 446 446 ILE ILE A . n A 1 227 ILE 227 447 447 ILE ILE A . n A 1 228 ILE 228 448 448 ILE ILE A . n A 1 229 VAL 229 449 449 VAL VAL A . n A 1 230 GLY 230 450 450 GLY GLY A . n A 1 231 ARG 231 451 451 ARG ARG A . n A 1 232 GLY 232 452 452 GLY GLY A . n A 1 233 ILE 233 453 453 ILE ILE A . n A 1 234 ILE 234 454 454 ILE ILE A . n A 1 235 SER 235 455 455 SER SER A . n A 1 236 ALA 236 456 456 ALA ALA A . n A 1 237 ALA 237 457 457 ALA ALA A . n A 1 238 ASP 238 458 458 ASP ASP A . n A 1 239 ARG 239 459 459 ARG ARG A . n A 1 240 LEU 240 460 460 LEU LEU A . n A 1 241 GLU 241 461 461 GLU GLU A . n A 1 242 ALA 242 462 462 ALA ALA A . n A 1 243 ALA 243 463 463 ALA ALA A . n A 1 244 GLU 244 464 464 GLU GLU A . n A 1 245 MET 245 465 465 MET MET A . n A 1 246 TYR 246 466 466 TYR TYR A . n A 1 247 ARG 247 467 467 ARG ARG A . n A 1 248 LYS 248 468 468 LYS LYS A . n A 1 249 ALA 249 469 469 ALA ALA A . n A 1 250 ALA 250 470 470 ALA ALA A . n A 1 251 TRP 251 471 471 TRP TRP A . n A 1 252 GLU 252 472 472 GLU GLU A . n A 1 253 ALA 253 473 473 ALA ALA A . n A 1 254 TYR 254 474 474 TYR TYR A . n A 1 255 LEU 255 475 475 LEU LEU A . n A 1 256 SER 256 476 476 SER SER A . n A 1 257 ARG 257 477 477 ARG ARG A . n A 1 258 LEU 258 478 478 LEU LEU A . n A 1 259 GLY 259 479 479 GLY GLY A . n A 1 260 VAL 260 480 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 JW5 1 482 482 JW5 JW5 A . C 3 HOH 1 483 483 HOH HOH A . C 3 HOH 2 484 484 HOH HOH A . C 3 HOH 3 485 485 HOH HOH A . C 3 HOH 4 486 486 HOH HOH A . C 3 HOH 5 487 487 HOH HOH A . C 3 HOH 6 488 488 HOH HOH A . C 3 HOH 7 489 489 HOH HOH A . C 3 HOH 8 490 490 HOH HOH A . C 3 HOH 9 491 491 HOH HOH A . C 3 HOH 10 492 492 HOH HOH A . C 3 HOH 11 493 493 HOH HOH A . C 3 HOH 12 494 494 HOH HOH A . C 3 HOH 13 495 495 HOH HOH A . C 3 HOH 14 496 496 HOH HOH A . C 3 HOH 15 497 497 HOH HOH A . C 3 HOH 16 498 498 HOH HOH A . C 3 HOH 17 499 499 HOH HOH A . C 3 HOH 18 500 500 HOH HOH A . C 3 HOH 19 501 501 HOH HOH A . C 3 HOH 20 502 502 HOH HOH A . C 3 HOH 21 503 503 HOH HOH A . C 3 HOH 22 504 504 HOH HOH A . C 3 HOH 23 505 505 HOH HOH A . C 3 HOH 24 506 506 HOH HOH A . C 3 HOH 25 507 507 HOH HOH A . C 3 HOH 26 508 508 HOH HOH A . C 3 HOH 27 509 509 HOH HOH A . C 3 HOH 28 510 510 HOH HOH A . C 3 HOH 29 511 511 HOH HOH A . C 3 HOH 30 512 512 HOH HOH A . C 3 HOH 31 513 513 HOH HOH A . C 3 HOH 32 514 514 HOH HOH A . C 3 HOH 33 515 515 HOH HOH A . C 3 HOH 34 516 516 HOH HOH A . C 3 HOH 35 517 517 HOH HOH A . C 3 HOH 36 518 518 HOH HOH A . C 3 HOH 37 519 519 HOH HOH A . C 3 HOH 38 520 520 HOH HOH A . C 3 HOH 39 521 521 HOH HOH A . C 3 HOH 40 522 522 HOH HOH A . C 3 HOH 41 523 523 HOH HOH A . C 3 HOH 42 524 524 HOH HOH A . C 3 HOH 43 525 525 HOH HOH A . C 3 HOH 44 526 526 HOH HOH A . C 3 HOH 45 527 527 HOH HOH A . C 3 HOH 46 528 528 HOH HOH A . C 3 HOH 47 529 529 HOH HOH A . C 3 HOH 48 530 530 HOH HOH A . C 3 HOH 49 531 531 HOH HOH A . C 3 HOH 50 532 532 HOH HOH A . C 3 HOH 51 533 533 HOH HOH A . C 3 HOH 52 534 534 HOH HOH A . C 3 HOH 53 535 535 HOH HOH A . C 3 HOH 54 536 536 HOH HOH A . C 3 HOH 55 537 537 HOH HOH A . C 3 HOH 56 538 538 HOH HOH A . C 3 HOH 57 539 539 HOH HOH A . C 3 HOH 58 540 540 HOH HOH A . C 3 HOH 59 541 541 HOH HOH A . C 3 HOH 60 542 542 HOH HOH A . C 3 HOH 61 543 543 HOH HOH A . C 3 HOH 62 544 544 HOH HOH A . C 3 HOH 63 545 545 HOH HOH A . C 3 HOH 64 546 546 HOH HOH A . C 3 HOH 65 547 547 HOH HOH A . C 3 HOH 66 548 548 HOH HOH A . C 3 HOH 67 549 549 HOH HOH A . C 3 HOH 68 550 550 HOH HOH A . C 3 HOH 69 551 551 HOH HOH A . C 3 HOH 70 552 552 HOH HOH A . C 3 HOH 71 553 553 HOH HOH A . C 3 HOH 72 554 554 HOH HOH A . C 3 HOH 73 555 555 HOH HOH A . C 3 HOH 74 556 556 HOH HOH A . C 3 HOH 75 557 557 HOH HOH A . C 3 HOH 76 558 558 HOH HOH A . C 3 HOH 77 559 559 HOH HOH A . C 3 HOH 78 560 560 HOH HOH A . C 3 HOH 79 561 561 HOH HOH A . C 3 HOH 80 562 562 HOH HOH A . C 3 HOH 81 563 563 HOH HOH A . C 3 HOH 82 564 564 HOH HOH A . C 3 HOH 83 565 565 HOH HOH A . C 3 HOH 84 566 566 HOH HOH A . C 3 HOH 85 567 567 HOH HOH A . C 3 HOH 86 568 568 HOH HOH A . C 3 HOH 87 569 569 HOH HOH A . C 3 HOH 88 570 570 HOH HOH A . C 3 HOH 89 571 571 HOH HOH A . C 3 HOH 90 572 572 HOH HOH A . C 3 HOH 91 573 573 HOH HOH A . C 3 HOH 92 574 574 HOH HOH A . C 3 HOH 93 575 575 HOH HOH A . C 3 HOH 94 576 576 HOH HOH A . C 3 HOH 95 577 577 HOH HOH A . C 3 HOH 96 578 578 HOH HOH A . C 3 HOH 97 579 579 HOH HOH A . C 3 HOH 98 580 580 HOH HOH A . C 3 HOH 99 581 581 HOH HOH A . C 3 HOH 100 582 582 HOH HOH A . C 3 HOH 101 583 583 HOH HOH A . C 3 HOH 102 584 584 HOH HOH A . C 3 HOH 103 585 585 HOH HOH A . C 3 HOH 104 586 586 HOH HOH A . C 3 HOH 105 587 587 HOH HOH A . C 3 HOH 106 588 588 HOH HOH A . C 3 HOH 107 589 589 HOH HOH A . C 3 HOH 108 590 590 HOH HOH A . C 3 HOH 109 591 591 HOH HOH A . C 3 HOH 110 592 592 HOH HOH A . C 3 HOH 111 593 593 HOH HOH A . C 3 HOH 112 594 594 HOH HOH A . C 3 HOH 113 595 595 HOH HOH A . C 3 HOH 114 596 596 HOH HOH A . C 3 HOH 115 597 597 HOH HOH A . C 3 HOH 116 598 598 HOH HOH A . C 3 HOH 117 599 599 HOH HOH A . C 3 HOH 118 600 600 HOH HOH A . C 3 HOH 119 601 601 HOH HOH A . C 3 HOH 120 602 602 HOH HOH A . C 3 HOH 121 603 603 HOH HOH A . C 3 HOH 122 604 604 HOH HOH A . C 3 HOH 123 605 605 HOH HOH A . C 3 HOH 124 606 606 HOH HOH A . C 3 HOH 125 607 607 HOH HOH A . C 3 HOH 126 608 608 HOH HOH A . C 3 HOH 127 609 609 HOH HOH A . C 3 HOH 128 610 610 HOH HOH A . C 3 HOH 129 611 611 HOH HOH A . C 3 HOH 130 612 612 HOH HOH A . C 3 HOH 131 613 613 HOH HOH A . C 3 HOH 132 614 614 HOH HOH A . C 3 HOH 133 615 615 HOH HOH A . C 3 HOH 134 616 616 HOH HOH A . C 3 HOH 135 617 617 HOH HOH A . C 3 HOH 136 618 618 HOH HOH A . C 3 HOH 137 619 619 HOH HOH A . C 3 HOH 138 620 620 HOH HOH A . C 3 HOH 139 621 621 HOH HOH A . C 3 HOH 140 622 622 HOH HOH A . C 3 HOH 141 623 623 HOH HOH A . C 3 HOH 142 624 624 HOH HOH A . C 3 HOH 143 625 625 HOH HOH A . C 3 HOH 144 626 626 HOH HOH A . C 3 HOH 145 627 627 HOH HOH A . C 3 HOH 146 628 628 HOH HOH A . C 3 HOH 147 629 629 HOH HOH A . C 3 HOH 148 630 630 HOH HOH A . C 3 HOH 149 631 631 HOH HOH A . C 3 HOH 150 632 632 HOH HOH A . C 3 HOH 151 633 633 HOH HOH A . C 3 HOH 152 634 634 HOH HOH A . C 3 HOH 153 635 635 HOH HOH A . C 3 HOH 154 636 636 HOH HOH A . C 3 HOH 155 637 637 HOH HOH A . C 3 HOH 156 638 638 HOH HOH A . C 3 HOH 157 639 639 HOH HOH A . C 3 HOH 158 640 640 HOH HOH A . C 3 HOH 159 641 641 HOH HOH A . C 3 HOH 160 642 642 HOH HOH A . C 3 HOH 161 643 643 HOH HOH A . C 3 HOH 162 644 644 HOH HOH A . C 3 HOH 163 645 645 HOH HOH A . C 3 HOH 164 646 646 HOH HOH A . C 3 HOH 165 647 647 HOH HOH A . C 3 HOH 166 648 648 HOH HOH A . C 3 HOH 167 649 649 HOH HOH A . C 3 HOH 168 650 650 HOH HOH A . C 3 HOH 169 651 651 HOH HOH A . C 3 HOH 170 652 652 HOH HOH A . C 3 HOH 171 653 653 HOH HOH A . C 3 HOH 172 654 654 HOH HOH A . C 3 HOH 173 655 655 HOH HOH A . C 3 HOH 174 656 656 HOH HOH A . C 3 HOH 175 657 657 HOH HOH A . C 3 HOH 176 658 658 HOH HOH A . C 3 HOH 177 659 659 HOH HOH A . C 3 HOH 178 660 660 HOH HOH A . C 3 HOH 179 661 661 HOH HOH A . C 3 HOH 180 662 662 HOH HOH A . C 3 HOH 181 663 663 HOH HOH A . C 3 HOH 182 664 664 HOH HOH A . C 3 HOH 183 665 665 HOH HOH A . C 3 HOH 184 666 666 HOH HOH A . C 3 HOH 185 667 667 HOH HOH A . C 3 HOH 186 668 668 HOH HOH A . C 3 HOH 187 669 669 HOH HOH A . C 3 HOH 188 670 670 HOH HOH A . C 3 HOH 189 671 671 HOH HOH A . C 3 HOH 190 672 672 HOH HOH A . C 3 HOH 191 673 673 HOH HOH A . C 3 HOH 192 674 674 HOH HOH A . C 3 HOH 193 675 675 HOH HOH A . C 3 HOH 194 676 676 HOH HOH A . C 3 HOH 195 677 677 HOH HOH A . C 3 HOH 196 678 678 HOH HOH A . C 3 HOH 197 679 679 HOH HOH A . C 3 HOH 198 680 680 HOH HOH A . C 3 HOH 199 681 681 HOH HOH A . C 3 HOH 200 682 682 HOH HOH A . C 3 HOH 201 683 683 HOH HOH A . C 3 HOH 202 684 684 HOH HOH A . C 3 HOH 203 685 685 HOH HOH A . C 3 HOH 204 686 686 HOH HOH A . C 3 HOH 205 687 687 HOH HOH A . C 3 HOH 206 688 688 HOH HOH A . C 3 HOH 207 689 689 HOH HOH A . C 3 HOH 208 690 690 HOH HOH A . C 3 HOH 209 691 691 HOH HOH A . C 3 HOH 210 692 692 HOH HOH A . C 3 HOH 211 693 693 HOH HOH A . C 3 HOH 212 694 694 HOH HOH A . C 3 HOH 213 695 695 HOH HOH A . C 3 HOH 214 696 696 HOH HOH A . C 3 HOH 215 697 697 HOH HOH A . C 3 HOH 216 698 698 HOH HOH A . C 3 HOH 217 699 699 HOH HOH A . C 3 HOH 218 700 700 HOH HOH A . C 3 HOH 219 701 701 HOH HOH A . C 3 HOH 220 702 702 HOH HOH A . C 3 HOH 221 703 703 HOH HOH A . C 3 HOH 222 704 704 HOH HOH A . C 3 HOH 223 705 705 HOH HOH A . C 3 HOH 224 706 706 HOH HOH A . C 3 HOH 225 707 707 HOH HOH A . C 3 HOH 226 708 708 HOH HOH A . C 3 HOH 227 709 709 HOH HOH A . C 3 HOH 228 710 710 HOH HOH A . C 3 HOH 229 711 711 HOH HOH A . C 3 HOH 230 712 712 HOH HOH A . C 3 HOH 231 713 713 HOH HOH A . C 3 HOH 232 714 714 HOH HOH A . C 3 HOH 233 715 715 HOH HOH A . C 3 HOH 234 716 716 HOH HOH A . C 3 HOH 235 717 717 HOH HOH A . C 3 HOH 236 718 718 HOH HOH A . C 3 HOH 237 719 719 HOH HOH A . C 3 HOH 238 720 720 HOH HOH A . C 3 HOH 239 721 721 HOH HOH A . C 3 HOH 240 722 722 HOH HOH A . C 3 HOH 241 723 723 HOH HOH A . C 3 HOH 242 724 724 HOH HOH A . C 3 HOH 243 725 725 HOH HOH A . C 3 HOH 244 726 726 HOH HOH A . C 3 HOH 245 727 727 HOH HOH A . C 3 HOH 246 728 728 HOH HOH A . C 3 HOH 247 729 729 HOH HOH A . C 3 HOH 248 730 730 HOH HOH A . C 3 HOH 249 731 731 HOH HOH A . C 3 HOH 250 732 732 HOH HOH A . C 3 HOH 251 733 733 HOH HOH A . C 3 HOH 252 734 734 HOH HOH A . C 3 HOH 253 735 735 HOH HOH A . C 3 HOH 254 736 736 HOH HOH A . C 3 HOH 255 737 737 HOH HOH A . C 3 HOH 256 738 738 HOH HOH A . C 3 HOH 257 739 739 HOH HOH A . C 3 HOH 258 740 740 HOH HOH A . C 3 HOH 259 741 741 HOH HOH A . C 3 HOH 260 742 742 HOH HOH A . C 3 HOH 261 743 743 HOH HOH A . C 3 HOH 262 744 744 HOH HOH A . C 3 HOH 263 745 745 HOH HOH A . C 3 HOH 264 746 746 HOH HOH A . C 3 HOH 265 747 747 HOH HOH A . C 3 HOH 266 748 748 HOH HOH A . C 3 HOH 267 749 749 HOH HOH A . C 3 HOH 268 750 750 HOH HOH A . C 3 HOH 269 751 751 HOH HOH A . C 3 HOH 270 752 752 HOH HOH A . C 3 HOH 271 753 753 HOH HOH A . C 3 HOH 272 754 754 HOH HOH A . C 3 HOH 273 755 755 HOH HOH A . C 3 HOH 274 756 756 HOH HOH A . C 3 HOH 275 757 757 HOH HOH A . C 3 HOH 276 758 758 HOH HOH A . C 3 HOH 277 759 759 HOH HOH A . C 3 HOH 278 760 760 HOH HOH A . C 3 HOH 279 761 761 HOH HOH A . C 3 HOH 280 762 762 HOH HOH A . C 3 HOH 281 763 763 HOH HOH A . C 3 HOH 282 764 764 HOH HOH A . C 3 HOH 283 765 765 HOH HOH A . C 3 HOH 284 766 766 HOH HOH A . C 3 HOH 285 767 767 HOH HOH A . C 3 HOH 286 768 768 HOH HOH A . C 3 HOH 287 769 769 HOH HOH A . C 3 HOH 288 770 770 HOH HOH A . C 3 HOH 289 771 771 HOH HOH A . C 3 HOH 290 772 772 HOH HOH A . C 3 HOH 291 773 773 HOH HOH A . C 3 HOH 292 774 774 HOH HOH A . C 3 HOH 293 775 775 HOH HOH A . C 3 HOH 294 776 776 HOH HOH A . C 3 HOH 295 777 777 HOH HOH A . C 3 HOH 296 778 778 HOH HOH A . C 3 HOH 297 779 779 HOH HOH A . C 3 HOH 298 780 780 HOH HOH A . C 3 HOH 299 781 781 HOH HOH A . C 3 HOH 300 782 782 HOH HOH A . C 3 HOH 301 783 783 HOH HOH A . C 3 HOH 302 784 784 HOH HOH A . C 3 HOH 303 785 785 HOH HOH A . C 3 HOH 304 786 786 HOH HOH A . C 3 HOH 305 787 787 HOH HOH A . C 3 HOH 306 788 788 HOH HOH A . C 3 HOH 307 789 789 HOH HOH A . C 3 HOH 308 790 790 HOH HOH A . C 3 HOH 309 791 791 HOH HOH A . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id CSS _pdbx_struct_mod_residue.label_seq_id 84 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id CSS _pdbx_struct_mod_residue.auth_seq_id 304 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id CYS _pdbx_struct_mod_residue.details S-MERCAPTOCYSTEINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5290 ? 1 MORE -33 ? 1 'SSA (A^2)' 18370 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 4_556 x,-y,-z+1 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 61.9100000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 485 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id C _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-11-06 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2021-10-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Database references' 3 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' struct_conn 3 3 'Structure model' struct_ref_seq_dif 4 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 3 'Structure model' '_struct_ref_seq_dif.details' 5 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 6 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 7 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _software.name REFMAC _software.classification refinement _software.version 5.2.0019 _software.citation_id ? _software.pdbx_ordinal 1 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OG _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 SER _pdbx_validate_close_contact.auth_seq_id_1 476 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 B _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 697 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.10 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 306 ? ? 64.71 73.93 2 1 ALA A 316 ? ? -159.67 45.53 3 1 PHE A 396 ? ? -130.65 -37.29 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 221 ? A GLY 1 2 1 Y 1 A ALA 222 ? A ALA 2 3 1 Y 1 A VAL 480 ? A VAL 260 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 ;6-(HYDROXYMETHYL)URIDINE 5'-(DIHYDROGEN PHOSPHATE) ; JW5 3 water HOH #